dsi_16409

exon [2r_12410421_12410569_+]; CDS [2r_12410421_12410569_+]; exon [2r_12410135_12410288_+]; CDS [2r_12410135_12410288_+]; intron [2r_12410289_12410420_+]

##################################################------------------------------------------------------------------------------------------------------------------------------------################################################## CCCTGTGGCGCCAGAAAGCAGGACGCGGCGACGATCAAGTTGTGATATGGGTAAGTGGATGAACCATAACGTAGCAATCTGAATGCTGCCACAATATTAAAAAAAGAAAGTTATAAGTAGTATCTGATGCATGATTTATTCTGTATTTCATCTACAAATTATGGAATCTCGTTGTCTTTTAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT ************************************************..(((..(((((.((((((.((((((.......))))))...........................((((.....((((((.((.....))))))))....))))...))))))....)))))..)))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M023 head	SRR553485 Chicharo_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs	SRR902008 ovaries	GSM343915 embryo
...................................................................................................................................................................................................................CTTGCTGAATCGCTGTTTGG.	20	0	1	1.00	1	1	0	0	0	0
.........GCCAGAAAGCAGGACGCGG............................................................................................................................................................................................................	19	0	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................TCCCTTGCTGAATCGCTGTTTG..	22	0	1	1.00	1	0	0	0	1	0
.CCTGTGGCGCCAGAAAGCAGGACGCGGC...........................................................................................................................................................................................................	28	0	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................ATGTAGGACTACCACGTGTT....................................	20	3	4	0.25	1	0	0	0	0	1

GGGACACCGCGGTCTTTCGTCCTGCGCCGCTGCTAGTTCAACACTATACCCATTCACCTACTTGGTATTGCATCGTTAGACTTACGACGGTGTTATAATTTTTTTCTTTCAATATTCATCATAGACTACGTACTAAATAAGACATAAAGTAGATGTTTAATACCTTAGAGCAACAGAAAATCCTGATGGTGCAGAAGAAGTATGTGTTAGGGAACGACTTAGCGACAAACCA ************************************************..(((..(((((.((((((.((((((.......))))))...........................((((.....((((((.((.....))))))))....))))...))))))....)))))..)))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M024 male body	SRR618934 dsim w501 ovaries	SRR553486 Makindu_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	GSM343915 embryo
.....................................................................................................................................................................................CCGGATGGTACAGAAGAACT...............................	20	3	2	0.50	1	1	0	0	0	0
.............................................................................................................................................................................................TCCGGAAGAAGTATGTG..........................	17	2	12	0.17	2	0	2	0	0	0
..................................AGGTCAACTCGATACCCATT..................................................................................................................................................................................	20	3	6	0.17	1	0	0	0	1	0
................................................................................................................................................................................................................AGGGAACGACTTAACGA.......	17	1	6	0.17	1	0	0	1	0	0
.....................................................................................................................................................................................................AAGTATGTGATCGGGAA..................	17	2	9	0.11	1	0	0	1	0	0
..............................................................................................................................................................................................CCGGAAGAAGTATGTG..........................	16	2	20	0.10	2	0	2	0	0	0
.....................................................................................................................................................................................TCTGATGGTGCAGAAA...................................	16	2	13	0.08	1	0	0	0	1	0
..................................................................................................................................TGGTAAATAAGACATAAGGT..................................................................................	20	3	14	0.07	1	0	0	0	0	1
...................................................................................................................................ACTAAATAAGACACAA.....................................................................................	16	1	17	0.06	1	0	1	0	0	0

Species	Coordinate	ID	Alignment
droSim2	2r:12410239-12410470 +	dsi_16409	CCCTGTGGCGCCAGAAAGCAGGACGCGGCGACGATCAAGTTGTGATATGGGTAAGTGGA----TGAACCA-TAAC-GT----------------------------------------AGCAATCTGAATGCTGCCACAAT-ATTAAAAA---------------AAGAAAG------------TTAT--------------------------AAGT---AGTATCTGAT------GC---------------------AT---------------------------------------------------------------------------------------------GATTTAT--TCTGT-----------------------------------ATTT---CATCTACAAATTATGGAAT---------------------C-----------------TC--------------------------------------------------GTTGTCTTTTAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT
droSec2	scaffold_1:9234268-9234498 +		CCCTGTGGCGCCAGAAAGCAGGACGCGGCGACGATCAAGTTGTGATATGGGTAAGTGGA----TGAACCA-TAAC-GT----------------------------------------AGCAATCTGAATGCTGCCACAAT-ATTAAG----------------TAAGAAAG------------TTAT--------------------------AAGT---AGTATCTGAT------GC---------------------AT---------------------------------------------------------------------------------------------TATTTAT--TCTGT-----------------------------------ATTT---CATCTACAAATTATGGAAT---------------------C-----------------TC--------------------------------------------------GTTGTCTTTTAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT
dm3	chr2R:11739997-11740225 +		CCCTGTGGCGCCAGAAAGCAGGACGCGGCGACGATCAAGTTGTGATATGGGTAAGTGGA----TGAACCA-TT---------------------------------------------------------ATTACCACAAT-GTTAAGAACAGAAACTACCATATTAGAAAG------------TTAT--------------------------ATGTAAAACTATGTGAT------GC---------------------ATGGATA---------------------------------------------------------------------------------AAC-TATGATTTAA--TATGT-----------------------------------ATTT---C----------------AT---------------------C-----------------AC--------------------------------------------------GTTGCCTTTTAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT
droEre2	scaffold_4845:14119367-14119637 -		CCCTTTGGCGCCAGAAGGCAGGACGTGGCGATGATCAAGTTGTGATATGGGTAAGTGGT----T----CA-TAAT-GTGAGAT-----AGTGCAAATGCATTCTAC------------AGCAAACTGAATGCCTTTACAAC-CGAAGGAACCGAAAC-----TATTAGAAAG------------TTGC--------------------------ACGCACAAGTATCTGAC------TC---------------------ACGGATGCA-------------------------------------------------------------------ACCTTAAAGAAAGACTGATGGTTTAA--AAGGT-----------------------------------GT----------------------------------------------------------------------T--TTTTGTA--------------------------------------ATCTTTCAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT
droYak3	2R:17244371-17244669 -		CCCTTTGGCGCCAGAAGGCAGGACGAGGCGACGATCAAGTTGTGATATGGGTGAGTGAA----TGAACCA-TAAC-GTAAGAT--------------------------------------------AATGCTGTTACAGT-ATTAGAAACTGA-AC-----TATGAGAAAG------------TTAC--------------------------ATGTTATAGTATATGATAACTACGC---------------------AT---------------------------------------------------------------------------------------------CGTTTATAAACTGC-------------GTTTTATTGAATACCAAATACCATTT---GATCTACCAAATATGGAATAGCACTCATAAACAAGATTGA--TGGT-----------------TCT--ATTTGGA--------------------------------------ATCTTTCAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT
droEug1	scf7180000409672:646596-646765 +		CACTGTGGCGCCAGAAGGCCGGTCGCGGCGATGATCAAGTTGTGATATGGGTAAGTAA-----TG------GAAT-AT---------------ATAG------------------------------------------------------------------------------------TTG------------------------TTAAACGGGTTG----ATC------------TTATACATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATATGA---------------------A-----------------T---TT-CTT------------------------------------------------TCTTAGGACTACCACGTCTTCTTCATGCACAATCCCTCGCTGAATCGCTGTTTGGT
droBia1	scf7180000302292:3911995-3912253 -		CACTCTGGCGCCAGAAGGCCGGACGAGGCGACGATCAAGTTGTGATATGGGTAAGTA------TGAAACAATCAC-TT--------------------------------TA------AACAATCAAACTGCTGATCACGGTTCATAAA---------------TTATAACTAGCT---AGCTGTAATGCTTAAAAACAAAATCTCTATTAAGCAGCTTG----AT----------------------------TGAA--------------------------------------------------------------------------CAACACCTT--TTGAATACTTATAGTATG--AACTAC-------------AT-----------------------------------------------------------------------------------------TT-------------------------------------------------TACCTTCAGGACTACCACGTCTTCTTCATGCACAATCCCTCGCTGAACCGCTGTCTGGT
droTak1	scf7180000415795:839050-839168 -		CACTTTGGCGCCAGAAGGCCGGACGAGGCGACGATCAAGTTGTGATATGGGTAAGTCCA----TGCACCA-GAAA-GT-------------------------------TAAGTG-ATAACAATCAAACTGCTGAACAAATTACCAAAA---------------AGAGAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1	scf7180000491107:731188-731256 +		CCCTTTGGCGCCAGAAAGCCGGCCGCGGCGACGATCAAGTTGTGATATGGGTAAGTGTA----TGAACCG-TAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1	scf7180000779911:367407-367474 -		CCCTGTGGCGCCAGAAGGCGGGACGCGGCGACGATCAAGTTGTGATATGGGTAAGTGGA----TGCGCCA-CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1	scf7180000453809:239006-239308 +		CCCTTTGGCGCCAGAAGGCCGGACGCGGCGATGATCAAGTTGTGATATGGGTAAGTTGA----TAGTGCA-CT---------------------AAGGCAC--------TGATTATAAAACGAACGAGCTGCTGTTCAGATTTCAAAAT---------------ATTAAACGAACTATAAGCTGTTAAGTGAA-------------TAGTAAACATGTTG----AT----------------------------TGAAATAAAGTTA--ATCTTTGATTAATCTTTGGTTTCCCCTCAAAGCTTCTACTAACATTTATTTTTAAAATTCATCCAA--------------------------------------------------------------------------------------------------------------------C-----------------CC--------------------------------------------------TTTAT-CTTCAGGACTACCACGTCTTCTTCATGCACAATCCCTCGCTGAATCGCTGTTTGGT
droKik1	scf7180000302682:1940100-1940263 +		CCCTGTGGCGTCAAAAGGCGGGTCGTGGCGATGATCAAGTTGTGATATGGGTGAGTAT-TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACTTATATATAT----------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATTGTGAAATTAATGTAT---------------------AA----------------ATATTA-AT------------------------------------------------TTTGCAGGACTACCACGTCTTTTTTATGCACAATCCCTCGCCGAATCGCTGCCTGGT
droAna3	scaffold_13266:12455630-12455816 -		CCCTGTGGCGCCAAAAAGCAGGACGTGGCGACGATCAAGTTGTGATATGGGTGAGTGCC----TTC------------GAGTTCGAATAGTTCGAATGATCTCCTCGTTTTAATA-TTGGCGATTATGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATT---CTT--ATCCCGG--------------------------------------AA-TAACAGGACTACCACGTCTTCTTCATGCACAATCCGTCGCCGAACCGGTGTTTGGT
droBip1	scf7180000396547:33327-33494 +		CCCTGTGGCGCCAAAAAGCAGGACGCGGCGACGATCAAGTTGTGATATGGGTGAGTCC-TCAA-----------G-ACGAGAT-----------------------------------------CAAACTGATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTACTAATACTATT---CCT--ATCTGGG--------------------------------------ACCATCCAGGACTACCACGTCTTTTTCATGCACAATCCATCGCCGAACCGATGTTTGGT
dp5	3:19446553-19446715 -		CGCTGTGGCGCCAGAAGGCCGGACGTGGCGACGATCAAGTTGTGATATGGGTGAGTGT-TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCCATTAAATCT----------------------------------------------------------------------------------------------------------------------------------------------------------AGCCATTTAGAAACTATTTCAT---------------------A-----------------TTGTTT-TCT------------------------------------------------TCACAGGACTACCATGTATTCTTCATGCACAATCCCTCGCCGAACCGCTGCCTGGT
droPer2	scaffold_37:448451-448613 -		CGCTGTGGCGCCAGAAGGCCGGACGTGGCGACGATCAAGTTGTGATATGGGTGAGTGT-TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCCATTAAATCT----------------------------------------------------------------------------------------------------------------------------------------------------------AGCCATTTAGAAACTATTTCAT---------------------A-----------------TTGTTT-TCT------------------------------------------------TCACAGGACTACCATGTATTCTTCATGCACAATCCCTCGCCGAACCGCTGCCTGGT
droWil2	scf2_1100000004513:4751284-4751445 +		CCCTATGGCGCCAAAAGGCCGGACGTGGCGATGATCAAGTTGTGATATGGGTAAGTCTA----TTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTATTCACAACTTTTACTTTTGTGATTGTATTTTCCATTTT-CCATAGGATTATCATGTATTCTTCATGCACAATCCCTTGCCGAATAGATGTTTGGT
droVir3	scaffold_12823:182613-182781 -	dvi_2817	CGCTCTGGCGCCAAAAAGCCGGACGTGGCGATGATCAAGTTGTGATATGGGTAATTCG-TC-T-----------TG-CAAAAC-----CATACATATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAATACTTCAT-----------------------------------------------------------------------------------------TT-TAT------------------------------------------------TGACAGGACTATCATGTCTTCTTTATGCACAATCCCTTGCCCAACCGCTGTTTGGT
droMoj3	scaffold_6496:33686-33844 -		CACTATGGCGACAAAAAGCTGGACGTGGTGATGATCAAGTTGTGATATGGGTAAGA-------TGCACCG-CAAA-AT---------------ACAG----------------CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-AAAATAATACGA---------------------A-----------------ATGTAT-CCT--TTGCG------------------------------------------AACAGGACTATCATGTATTCTTTATGCATAATCCCTTGCCCAACCGCTGTTTGGT
droGri2	scaffold_15245:6474673-6474835 +		CGCTGTGGCGTCAAAAAGCCGGACGCGGCGATGATCAAGTTGTCATCTGGGTAAGTTG-CC-T-----------TG-CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACGCTTGGAACTTTGAAATGAAAATGCTT---------------------A-----------------CTTATA-TAT------------------------------------------------TGACAGGACTATCATGTATTCTTCATGCACAATCCCCTGCCGAATCGCTGTTTAGT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CCCTGTGGCGCCAGAAAGCAGGACGCGGCGACGATCAAGTTGTGATATGGGTAAGTGGA----TGAACCA-TAAC-GT----------------------------------------AGCAATCTGAATGCTGCCACAAT-ATTAAAAA---------------AAGAAAG------------TTAT--------------------------AAGT---AGTATCTGAT------GC---------------------AT---------------------------------------------------------------------------------------------GATTTAT--TCTGT-----------------------------------ATTT---CATCTACAAATTATGGAAT---------------------C-----------------TC--------------------------------------------------GTTGTCTTTTAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCTGAATCGCTGTTTGG.	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........GCCAGAAAGCAGGACGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTTGCTGAATCGCTGTTTG..	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.CCTGTGGCGCCAGAAAGCAGGACGCGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

CCCTGTGGCGCCAGAAAGCAGGACGCGGCGACGATCAAGTTGTGATATGGGTAAGTGGA----TGAACCA-TAAC-GT----------------------------------------AGCAATCTGAATGCTGCCACAAT-ATTAAG----------------TAAGAAAG------------TTAT--------------------------AAGT---AGTATCTGAT------GC---------------------AT---------------------------------------------------------------------------------------------TATTTAT--TCTGT-----------------------------------ATTT---CATCTACAAATTATGGAAT---------------------C-----------------TC--------------------------------------------------GTTGTCTTTTAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.................................ATCAAGTTGTGATATGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0

dm3

CCCTGTGGCGCCAGAAAGCAGGACGCGGCGACGATCAAGTTGTGATATGGGTAAGTGGA----TGAACCA-TT---------------------------------------------------------ATTACCACAAT-GTTAAGAACAGAAACTACCATATTAGAAAG------------TTAT--------------------------ATGTAAAACTATGTGAT------GC---------------------ATGGATA---------------------------------------------------------------------------------AAC-TATGATTTAA--TATGT-----------------------------------ATTT---C----------------AT---------------------C-----------------AC--------------------------------------------------GTTGCCTTTTAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.............................GACGATCAAGTTGTGATATGGGACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACGTCTTCTTCATACACAATCCCT...................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTTGCTGAATCGCTGTTTGG.	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCACGTCTTCTTCATACACA.........................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CCCTGTGGCGCCAGAAAGCAGGACGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................TCAAGTTGTGATATGGGACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................ATCAAGTTGTGATATGGGACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TGTGATATGGGTAAGTGGG----CC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CCCTTTGGCGCCAGAAGGCAGGACGTGGCGATGATCAAGTTGTGATATGGGTAAGTGGT----T----CA-TAAT-GTGAGAT-----AGTGCAAATGCATTCTAC------------AGCAAACTGAATGCCTTTACAAC-CGAAGGAACCGAAAC-----TATTAGAAAG------------TTGC--------------------------ACGCACAAGTATCTGAC------TC---------------------ACGGATGCA-------------------------------------------------------------------ACCTTAAAGAAAGACTGATGGTTTAA--AAGGT-----------------------------------GT----------------------------------------------------------------------T--TTTTGTA--------------------------------------ATCTTTCAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droYak3

CCCTTTGGCGCCAGAAGGCAGGACGAGGCGACGATCAAGTTGTGATATGGGTGAGTGAA----TGAACCA-TAAC-GTAAGAT--------------------------------------------AATGCTGTTACAGT-ATTAGAAACTGA-AC-----TATGAGAAAG------------TTAC--------------------------ATGTTATAGTATATGATAACTACGC---------------------AT---------------------------------------------------------------------------------------------CGTTTATAAACTGC-------------GTTTTATTGAATACCAAATACCATTT---GATCTACCAAATATGGAATAGCACTCATAAACAAGATTGA--TGGT-----------------TCT--ATTTGGA--------------------------------------ATCTTTCAGGACTACCACGTCTTCTTCATACACAATCCCTTGCTGAATCGCTGTTTGGT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
................................GATCAAGTTGTGATATGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

CACTGTGGCGCCAGAAGGCCGGTCGCGGCGATGATCAAGTTGTGATATGGGTAAGTAA-----TG------GAAT-AT---------------ATAG------------------------------------------------------------------------------------TTG------------------------TTAAACGGGTTG----ATC------------TTATACATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATATGA---------------------A-----------------T---TT-CTT------------------------------------------------TCTTAGGACTACCACGTCTTCTTCATGCACAATCCCTCGCTGAATCGCTGTTTGGT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CACTCTGGCGCCAGAAGGCCGGACGAGGCGACGATCAAGTTGTGATATGGGTAAGTA------TGAAACAATCAC-TT--------------------------------TA------AACAATCAAACTGCTGATCACGGTTCATAAA---------------TTATAACTAGCT---AGCTGTAATGCTTAAAAACAAAATCTCTATTAAGCAGCTTG----AT----------------------------TGAA--------------------------------------------------------------------------CAACACCTT--TTGAATACTTATAGTATG--AACTAC-------------AT-----------------------------------------------------------------------------------------TT-------------------------------------------------TACCTTCAGGACTACCACGTCTTCTTCATGCACAATCCCTCGCTGAACCGCTGTCTGGT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CACTTTGGCGCCAGAAGGCCGGACGAGGCGACGATCAAGTTGTGATATGGGTAAGTCCA----TGCACCA-GAAA-GT-------------------------------TAAGTG-ATAACAATCAAACTGCTGAACAAATTACCAAAA---------------AGAGAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CCCTTTGGCGCCAGAAAGCCGGCCGCGGCGACGATCAAGTTGTGATATGGGTAAGTGTA----TGAACCG-TAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CCCTGTGGCGCCAGAAGGCGGGACGCGGCGACGATCAAGTTGTGATATGGGTAAGTGGA----TGCGCCA-CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CCCTTTGGCGCCAGAAGGCCGGACGCGGCGATGATCAAGTTGTGATATGGGTAAGTTGA----TAGTGCA-CT---------------------AAGGCAC--------TGATTATAAAACGAACGAGCTGCTGTTCAGATTTCAAAAT---------------ATTAAACGAACTATAAGCTGTTAAGTGAA-------------TAGTAAACATGTTG----AT----------------------------TGAAATAAAGTTA--ATCTTTGATTAATCTTTGGTTTCCCCTCAAAGCTTCTACTAACATTTATTTTTAAAATTCATCCAA--------------------------------------------------------------------------------------------------------------------C-----------------CC--------------------------------------------------TTTAT-CTTCAGGACTACCACGTCTTCTTCATGCACAATCCCTCGCTGAATCGCTGTTTGGT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CCCTGTGGCGTCAAAAGGCGGGTCGTGGCGATGATCAAGTTGTGATATGGGTGAGTAT-TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACTTATATATAT----------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATTGTGAAATTAATGTAT---------------------AA----------------ATATTA-AT------------------------------------------------TTTGCAGGACTACCACGTCTTTTTTATGCACAATCCCTCGCCGAATCGCTGCCTGGT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CCCTGTGGCGCCAAAAAGCAGGACGTGGCGACGATCAAGTTGTGATATGGGTGAGTGCC----TTC------------GAGTTCGAATAGTTCGAATGATCTCCTCGTTTTAATA-TTGGCGATTATGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATT---CTT--ATCCCGG--------------------------------------AA-TAACAGGACTACCACGTCTTCTTCATGCACAATCCGTCGCCGAACCGGTGTTTGGT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...............AAGCAGGACGTGGCGACGATCAAGTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATGCACAATCCGTCGCCGAACC..........	25	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGAACCGGTGTTTGGT	19	1	1.00	1	0	1	0	0	0	0
.........GCCAAAAAGCAGGACGTGGCGACGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0

droBip1

CCCTGTGGCGCCAAAAAGCAGGACGCGGCGACGATCAAGTTGTGATATGGGTGAGTCC-TCAA-----------G-ACGAGAT-----------------------------------------CAAACTGATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTACTAATACTATT---CCT--ATCTGGG--------------------------------------ACCATCCAGGACTACCACGTCTTTTTCATGCACAATCCATCGCCGAACCGATGTTTGGT	Size	Hit Count	Total Norm	Total
No Reads

dp5

CGCTGTGGCGCCAGAAGGCCGGACGTGGCGACGATCAAGTTGTGATATGGGTGAGTGT-TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCCATTAAATCT----------------------------------------------------------------------------------------------------------------------------------------------------------AGCCATTTAGAAACTATTTCAT---------------------A-----------------TTGTTT-TCT------------------------------------------------TCACAGGACTACCATGTATTCTTCATGCACAATCCCTCGCCGAACCGCTGCCTGGT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.............................GACGATCAAGTTGTGATATGGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	1	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGAACCGCTGCCTGGT	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACAATCCCTCGCCGAACCGCTGCC....	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCACAATCCCTCGCCGAACC..........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............AGAAGGCCGGACGTGGCGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

CGCTGTGGCGCCAGAAGGCCGGACGTGGCGACGATCAAGTTGTGATATGGGTGAGTGT-TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCCATTAAATCT----------------------------------------------------------------------------------------------------------------------------------------------------------AGCCATTTAGAAACTATTTCAT---------------------A-----------------TTGTTT-TCT------------------------------------------------TCACAGGACTACCATGTATTCTTCATGCACAATCCCTCGCCGAACCGCTGCCTGGT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
................................GATCAAGTTGTGATATGGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCTCGCCGAACCGCTG......	19	1	1.00	1	1	0	0	0	0	0
..........................GGCGACGATCAAGTTGTGATATGGGACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1
.......................CGTGGCGACGATCAAGTTGTGATATGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1

droWil2

CCCTATGGCGCCAAAAGGCCGGACGTGGCGATGATCAAGTTGTGATATGGGTAAGTCTA----TTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTATTCACAACTTTTACTTTTGTGATTGTATTTTCCATTTT-CCATAGGATTATCATGTATTCTTCATGCACAATCCCTTGCCGAATAGATGTTTGGT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCTTGCCGAATAGATGTTTGGT	26	1	1.00	1	0	0	0	1	0
........................GTGGCGATGATCAAGTTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0

droVir3

CGCTCTGGCGCCAAAAAGCCGGACGTGGCGATGATCAAGTTGTGATATGGGTAATTCG-TC-T-----------TG-CAAAAC-----CATACATATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAATACTTCAT-----------------------------------------------------------------------------------------TT-TAT------------------------------------------------TGACAGGACTATCATGTCTTCTTTATGCACAATCCCTTGCCCAACCGCTGTTTGGT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
............................CGATGATCAAGTTGTGATATGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	57.00	57	0	0	0	0	6	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	23	2	0	1	0	0	0	0	0	16	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-TC-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	50.00	50	0	0	6	0	3	1	11	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	11	7	0	2	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................CAAGTTGTGATATGGGTAATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	37.00	37	0	0	4	0	18	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTTTATGCACAATCCCTTGCCC..............	27	1	26.00	26	6	0	17	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	26.00	26	0	0	0	0	1	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	5	1	0	1	0	0	0	0	0	7	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	25.00	25	3	0	0	1	10	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	6	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCT.................................................................................................................................................................................................................	23	1	25.00	25	0	0	7	0	2	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	1	0	0	4	2	2	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGC..................................................................................................................................................................................................................	22	1	20.00	20	0	0	12	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAATAC............................................................................................................................................................................................................	28	1	19.00	19	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTTTATGCACAATCCCTTG.................	24	1	15.00	15	0	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	14.00	14	0	0	2	0	1	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-TC-T-----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	14.00	14	0	0	4	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATTCG-TC-T-----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	14.00	14	10	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCACAATCCCTTGCCC..............	23	1	13.00	13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	2	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAATACT...........................................................................................................................................................................................................	29	1	13.00	13	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCACAATCCCTTG.................	20	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	0	0	1	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTA................................................................................................................................................................................................................	24	1	11.00	11	1	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	10.00	10	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCACAATCCCTTGC................	21	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	3	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCACAATCCCTTGCC...............	22	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	1	0	0	0	2	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	9.00	9	0	0	0	0	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	8.00	8	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTTTATGCACAATCCCTT..................	23	1	7.00	7	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTTTATGCACAATCCCTTGCC...............	26	1	7.00	7	1	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATTCG-TC-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	6.00	6	0	0	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTTTATGCACAATCCCTTGC................	25	1	6.00	6	1	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	6.00	6	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTTTATGCACAATCCCTTGCCCA.............	28	1	6.00	6	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-TC-T-----------TG-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	5.00	5	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATTCG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	5.00	5	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................GTTGTGATATGGGTAATTCG-TC-T-----------TG-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	5.00	5	0	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGGGTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAATA.............................................................................................................................................................................................................	27	1	4.00	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTTTATGCACAATCCCTTGCCCAA............	29	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-TC-T-----------TG-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	4.00	4	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAA...............................................................................................................................................................................................................	25	1	4.00	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-TC-C-----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	4.00	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAAT..............................................................................................................................................................................................................	26	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGCACAATCCCTTGCCCAACCGC........	27	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGGGACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCAC....................................................................................................................................................................................................................	20	1	3.00	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTTTATGCACAATCCCT...................	22	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAATC.............................................................................................................................................................................................................	27	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATTCG-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCACAATCCCTTGCCCA.............	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................GATGATCAAGTTGTGATATGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....................................AGTTGTGATATGGGTAATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGGGTATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCACAATCCCTTGCCCAAC...........	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTTATGCACAATCCCTTGCC...............	25	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................AAGTTGTGATATGGGTAATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCACAATCCCTTGCCCAA............	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGGGTAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCCCAACCGCTGTTTGGT	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...............................................................................................ATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGC..................................................................................................................................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACG...................................................................................................................................................................................................................	21	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCA.....................................................................................................................................................................................................................	19	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................GGCGATGATCAAGTTGTGATATGGGACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................AAGTTGTGATATGGGTAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGCACAATCCCTTGCCCAACC..........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCACAATCCCTTGCCC..............	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATTCG-TC-G-----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTT................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCACAATCCCTTGCCCAACCGCT.......	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATTCG-TC-T-----------TG-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTTATGCACAATCCCTTGC................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCTTGCCCAACCGCT.......	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCTTGCCCAACCGCTGTTTGGT	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................AATTCG-TC-T-----------TG-CAAAAC-----CATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCCAACCGCTGTTTGG.	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................TAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAATA.............................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................AAGTTGTGATATGGGTAATTCG-TC-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCACAATCCCTTGCCCAAT...........	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCACAATCCCTTGCCC..............	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................GTTGTGATATGGGTAATTCG-TC-T-----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTATGCACAATCCCTTGC................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-TT-A-----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTTGCCCAACCGCTGTTTGGC	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGGGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTTATGCACAATCCCTTGCCC..............	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGATGATCAAGTTGTGATATGGGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................GTTGTGATATGGGTAATTCG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................AAGTTGTGATATGGGTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTTATGCACAATCCCTTGCCC..............	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-TC-T-----------TA-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTTATGCACAATCCCTT..................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-TC-T-----------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................ACATATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAA...............................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGCACAATCCCTTGCCCAA............	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................TCAT-----------------------------------------------------------------------------------------TT-TAT------------------------------------------------TGACAGGACTATCAT.........................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAT...............................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAATACT...........................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAATTCG-TC-C-----------CC-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-TC-T-----------TA-A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATGTCTTCTTTATGCACAATCCC....................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................ATATGGGTAATTCG-TC-T-----------TG-CAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AGTTGTGATATGGGTAATTCG-TC-T-----------TT-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAT------------------------------------------------TGACAGGACTATCATGTCT.....................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTTATGCACAATCCCTTG.................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTTATGCACAATCCCTTGCCCAA............	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................ATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACG...................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCACAATCCCTTGCCCAACC..........	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACGCTAATACA...........................................................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCACAATCCCTTGCT...............	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................TAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATACACTGCACG...................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GACGTGGCGATGATCAAGTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TCG-TC-T-----------TG-CAAAAC-----CATACATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CACTATGGCGACAAAAAGCTGGACGTGGTGATGATCAAGTTGTGATATGGGTAAGA-------TGCACCG-CAAA-AT---------------ACAG----------------CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-AAAATAATACGA---------------------A-----------------ATGTAT-CCT--TTGCG------------------------------------------AACAGGACTATCATGTATTCTTTATGCATAATCCCTTGCCCAACCGCTGTTTGGT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTTTATGCATAATCCCTTGC................	25	1	6.00	6	6	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAAGA-------TGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	5.00	5	3	0	0	0	1	1
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTTTATGCATAATCCCTTGCCC..............	27	1	3.00	3	0	0	0	0	3	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTTTATGCATAATCCCTTGCC...............	26	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTTTATGCATAATCCCTTG.................	24	1	2.00	2	2	0	0	0	0	0
.......GCGACAAAAAGCTGGACGTGGTGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.......GCGACAAAAAGCTGGACGTGGTGATGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.....TGGCGACAAAAAGCTGGACGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
.......GCGACAAAAAGCTGGACGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCATAATCCCTTGCCCAACCG.........	24	1	1.00	1	1	0	0	0	0	0
.......GCGACAAAAAGCTGGACGTGGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTTTATGCATAATCCC....................	21	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATGCATAATCCCTTGCCC..............	23	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTTATGCATAATCCCTTGCC...............	25	1	1.00	1	1	0	0	0	0	0
............................TGATGATCAAGTTGTGATATGGGACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...................................CAAGTTGTGATATGGGTAAGA-------TGCACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.....................................AGTTGTGATATGGGTAAGA-------TGCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.....................GACGTGGTGATGATCAAGTTGTGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...............................TGATCAAGTTGTGATATGGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0

droGri2

CGCTGTGGCGTCAAAAAGCCGGACGCGGCGATGATCAAGTTGTCATCTGGGTAAGTTG-CC-T-----------TG-CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACGCTTGGAACTTTGAAATGAAAATGCTT---------------------A-----------------CTTATA-TAT------------------------------------------------TGACAGGACTATCATGTATTCTTCATGCACAATCCCCTGCCGAATCGCTGTTTAGT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAATCCCCTGCCGAATC..........	19	1	1.00	1	1	0

dsi_16409

2r:12410289-12410420 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads