ID:

dsi_16331

 Coordinate:

3r:23174546-23174695 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAGTGACTGCATGGCCGCCTGGTAATCGGAGGAGCAGCGGCATGAACATAACACGACCTAACCTCACTATCAATCGGAATTTTGTGTGTGCCGCCGCTGCTTTGGCATAATCGTGATGTAATTGCCCACGTCTCGAGTGCAACCAAGAGTTGCGTTCCTCATTAAGAGCTCGGTGTGGTATAGCCACACATAGCTA
*********************************************************************.............((((.....((..............))......)))).********************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
................................................................................................TGAACATAACACGACCTT........................................................................................................................................ 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................ACATAACACGACCTAACCTCA.................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TTAAGAGCTCGGTGTGGTAT............... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................TGAACATAACACGACCTAACCT.................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................CGCTGGACTCCGTCAAGACGCG................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................CGCCTGGTAATCGGAGGAGCA................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................TAAGAGCTCGGCGTTGTAT............... 19 2 1 1.00 1 0 0 1 0 0 0 0 0 0
................GCATGTGGTCATGTATCCGCT..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................GTAATCGGAGGAGCAGCGGCATG........................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................................GAGTGACTGTATTTCCGCCTG............................................................................................................................................................................... 21 3 5 0.40 2 0 0 2 0 0 0 0 0 0
..............................................................................................................................................................................................................................CTCGGAGTGTTATAGCC........... 17 2 5 0.20 1 0 0 0 0 0 0 1 0 0
........................................................................CTGGCAATCGGAGGAG.................................................................................................................................................................. 16 1 8 0.13 1 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................TAAGAGCTCAGTGAGGTAT............... 19 2 11 0.09 1 0 0 0 0 0 0 0 1 0
...........CTGGAGCATGTGGTT................................................................................................................................................................................................................................ 15 1 12 0.08 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................CTGCTTGGGCATAAT..................................................................................... 15 1 15 0.07 1 0 0 0 0 0 0 0 1 0
...................................................................GACGCCTCGTAATCGGA...................................................................................................................................................................... 17 2 15 0.07 1 0 0 1 0 0 0 0 0 0
........................................................GTGAGTGCATGGCCG................................................................................................................................................................................... 15 1 15 0.07 1 0 0 0 0 0 0 0 1 0
............TGGAGCATGTGGACA............................................................................................................................................................................................................................... 15 1 17 0.06 1 0 0 0 0 0 0 1 0 0
..................................................GTGAGAGGAACTGCATGGA..................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 1
ATGAGGGCGTGCTGGA.......................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

AACGCCCGCACGACCTCGTACACCAGTACATAGGCGACCTGAGGCAGTTCCACTCTCACTGACGTACCGGCGGACCATTAGCCTCCTCGTCGCCGTACTTGTATTGTGCTGGATTGGAGTGATAGTTAGCCTTAAAACACACACGGCGGCGACGAAACCGTATTAGCACTACATTAACGGGTGCAGAGCTCACGTTGGTTCTCAACGCAAGGAGTAATTCTCGAGCCACACCATATCGGTGTGTATCGAT
**********************************************************************************************************************************.............((((.....((..............))......)))).********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 O002
Head
 SRR618934
dsim w501 ovaries
 M025
embryo
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 M023
head
......................................................................CGGACCATTAGCCTCCTC.................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................GGTGCAGAGCTCACGTTGGT................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................CGTCGCCGTACTTGTATTGT............................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................GCAAGGAGTAATTCTCGAGCC....................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................CGGGTGCAGAGCTCGCGTTG..................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................CTGGATTGGAGTGATAGTTAG......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TCGCCGTACTTGTATTGTGCT............................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................TACTTGTATTGTGCTGGATTG...................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................................................................................CTTGTATACTGCTGGAT........................................................................................................................................ 17 2 5 0.20 1 0 0 1 0 0 0 0 0 0
.............................................................................................................TGGATTGGAATGATA.............................................................................................................................. 15 1 8 0.13 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................CTTAAAATGCACAAGGCGG..................................................................................................... 19 3 20 0.10 2 1 0 0 0 0 0 0 0 1
....................................................................GGCGGAGAATTAGCCTC..................................................................................................................................................................... 17 2 10 0.10 1 0 0 0 0 0 1 0 0 0
..........................................................................................................GGCTGGAATGGAGTGCTA.............................................................................................................................. 18 3 16 0.06 1 0 0 0 0 0 0 1 0 0
........................................................................................................................................ACACTCACGGCGGCGGCG................................................................................................ 18 2 16 0.06 1 0 0 0 0 0 0 0 1 0
.................................................................................................CTTGTATACTGCTGGA......................................................................................................................................... 16 2 19 0.05 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................TTTGCTGTCAACGCAAGGA..................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0
....................................................................................................CTATTGTGCTGTATTG...................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:23174496-23174745 - dsi_16331 TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------T---------------------GACTGCAT-GGC-CGCC---TGGTAATC---------GGAGGAGCAGCGG--------------------CATGAA-------CATAACA------------------C-GACCTAACCTCACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTGCCCACG--TCTCGAGTGCAA-CCAAGAGTT-GCGT--TC-CTC-------ATTAAGAGC--TCGGTGT--------------GG-TA------------TAGCCA----CACATAGCTA
droSec2 scaffold_22:397929-398178 - TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------T---------------------GACTGCAT-GGC-CGCC---TGGTAATC---------GGAGGAGCAGCGG--------------------CATGAA-------CATAACA------------------C-GACCTAACCTCACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAAGCGTGATGTAATTGCCCACG--TCTTGAGTGCAA-CCAAGAGTT-GCGT--TC-CTC-------ATTAAGAGC--TCGGTGT--------------GG-TA------------TAGCCA----CACATAGCTA
dm3 chr3R:23772726-23772965 - TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------A---------------------GACTGCAT-GGC-CGCC---TGGTAATC---------GGAGGAGCAGCGG--------------------CATGAA-------CATAACA------------------C-GACCTAACCTCACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTGCCCACG--TCTCGAGTGCAA-CCAAGAGTT-GCGT--TT-CTC-------ATTAAGAGC--TCTGGGT--------------GG-TA------------TAGCCA--------------
droEre2 scaffold_4820:4269648-4269884 + TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCAGTCAAGGTGAGAC----------------------------------T-------------------------GCAT-TGC-CGCC---TGGTAATC---------GGAGGAGCAGC-----------------------ATGAA-------CATAACCCA-----C--------C-C-GACCTAACCTCACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTGGGCATAATCGTGATGTAATTCCCCACG--TCTCGAATGCAA-CCAAGAGTT-GCGC--TC-CTC-------ATTAATAGC--TCTGGGT--------------GG-TA------------AAGCCA--------------
droYak3 3R:22724626-22724863 + TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCACTGGACTCTGTCAAGGTGAGAC----------------------------------T-------------------------GCAT-TGC-CGCC---TGGTAATC---------GGAGGAGCAGC-----------------------ATGAA-------CATAACC------------------C-GACCTAACCTCACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTCGGCATAATCGTGATGTAATTCCCCACG--TCTCGAGTGCAA-CCAAGAGTT-GCGT--TC-CTC-------ATTAAGAGC--TCTGGGT--------------GG-TA------------TAGCCAGATAC---------
droEug1 scf7180000409787:1834181-1834434 + TTGCGGGTGTACTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------A-------------------------TCAT-TAC-GGCC---TGGTAATA---------GGAGAAGGAGCA-----------------------TAAG------------CC----CGACCAT-TAATCATAAACCTAACCTCACTAA---------------CAATCGGAACA-T--TGTG----TG----------TGCCA------------------CC---------------GCCG--------------------------CTG---CTGCTTTGGCATAATCGTGATGTAATTCGTTGGT--TCTTGAGTGCAA-CTAAGAGTT-CCGT--AC-C-CGTTGCCCAATAAGA-C--TCTAGGT--------------GG-TA------------TAGCCA----C---------
droBia1 scf7180000302075:5344786-5345052 - TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAA----------------------------------T-------------------------GGCT-TAC-CGCC---TGCT--TCCCATGACCAGGACGAG---CAT--------------------AATGGG-------CAGCACCCCGCCGACCCCAGAGCCATAAACCTAACCTCACTAA---------------CCGTCTGAATGTTTTTGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTCCTCGGG--TCTCGAGTGCAG-CCAAGAGTT-CCGT--TC-CCCATTTCCCATTAGGAGC--TCTAGGT---------------G-TA------------TAGCC---------------
droTak1 scf7180000415310:365005-365265 - TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------A-------------------------GCAT-TGC-CGCC---CGGTAACC---------GGAGCAGGAGCCT--------------------CATAAA-------CAGAACC----CGACCC---GACCATAAACCTAACCTCACTAA--------------ACAGTCGGAATTTT--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTCCTCGGG--TCTCGAGTGCAA-CCAAGAGTT-CCGC--TC-CCCGATTCCCATTAAGAGC--TCTGGGT--------------GG-TG------------TAGCG-----C--TTAG---
droEle1 scf7180000491280:4258233-4258495 + TTGCGGGTGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAT----------------------------------C---------------------G---GCGT-TACCCGTCCGGTGGTAATC---------GGAGGAGGAGCA-----------------------TAAT--AC-GG-----------------------CATAAACCTAACCTCACTAA---------------CCATCGGAATT-T--TGTG----TG----------TGCCA------------------CCGTCGCCATCGCCGCTGCCG--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTCCTCGGG--TATCAACTGCAAACCAAGAGTT-TCCCAGTC-CCA-------ATGAACAGC--TTTAGGT--------------GG-AA------------TAGCCA----C---------
droRho1 scf7180000779538:506802-507022 + TTGCTGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------C---------------------------GT-TACCCGCC---TGGTAACC---------GGAGGAG---CA-----------------------TAAT--AC-----------------------GGCCATAAACCTAACCTCACTAC---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCGCTTCTGCTTTGGCATAATCGTGATGTAATTTCTCGGG--TATCAACTGCAA-CCAAGAGTT-CC--------CC-------ATTCTCAGC--TTTGCGT--------------GG-T---------------------------------
droFic1 scf7180000453826:163024-163254 + TTGCTGGCGTGCTGGAGCATGTGGTCATGTATCCACTGGACTCCGTCAAGGTGAGCG----------------------------------C---------------------------ACTGGA-CGTC---TGGTAATC---------GGAGGAG---CA-----------------------TAAA-------G---C---------------TACCATAAACCTAACCTCACTAA---------------CAATCGGAATTTT--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTCCTCGGG--TCTCGAGTGCAG-CCAAGAGGTCCCGC--TCCCCC-------ATTAAGAGC--TTTAGGT--------------AG-TA------------AAGT----------------
droKik1 scf7180000302706:1736200-1736448 - TTGCGGGCGTGCTGGAGCACTTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGCG----------------------------------CCCTT-CCAGCGAA-------------------C-CAGC---TGGTAACC---------GGAGGAG---CG-----------------------TAAA--CA-AG--C-----------------AGGCAT--ACCTAACCTCACAAATG-CGCGT----ACACAATCG-AATT-T--TGTG----AG----------TGCC---------------------------------------A---------------------AGTGCCCA---CTGCTTAGATATAATCGTGATGTAATTCCTCGGGCACCTCGAGTGCAG-CCAAGAGCT-CTC--------------------GGGGCT-TC-----GGTTTTTG----GGAGCCA------------TAGC----------------
droAna3 scaffold_13340:21907075-21907339 - TTGCTGGCGTGCTGGAGCATGTGATCATGTATCCACTGGACTCAGTCAAGGTAAGTG----------------------------------CCCTT-CCATCGAACCGAATTCGACTG-----------C---AGGTAACC---------GGAGGAGGAGGAGGAGGAGCACTTGCCCAAGAGTATAAA--CA-AG--CATCA------------------T-AACCTAACCTCACAAATC-CGTGT----ACACAAACAACAAA---------------------------T---------------------------------------T--------------------------CCT---ATGCTCTGGCATAATCGTGATGTAATTCCTTGGG--TTTTAAGTGCAA-CCCAGAGCT-CTGG--TG------------------GCTCTTTTGGG--------------GG-TT------------TAGAA-----T---------
droBip1 scf7180000396583:298617-298859 + TTGCGGGCGTGCTGGAGCATGTGATCATGTATCCGCTGGACTCAGTCAAGGTAAGCG----------------------------------CCCTG-CCACCGAGCC------GGCTG------G-TGGC---AGGTAACC---------GGAGGAGCACTTG------------TCCAAGAGTATAAA--CA-AG-----------------------CA--TACCTAACCTCACAAACG-CGTGT----ACACAAACAAAAAT-T--CGTA---------------------------------------------------------------------------------------------TGCTCTGGCATAATCGTGATGTAATTCCTCGGG--TTTTTAGTGCAA-CCGAGAGCT-CTG--------------------GGGGC--TCTTT---------G----GGGG-TT------------TAGA----------------
dp5 2:8316058-8316320 + TCGCTGGCGTTCTGGAGCATGTGGTCATGTATCCGCTGGACTCTGTTAAGGTGAGAG----------------------------------ACTTT---------------------------TC-CG------------C---------GGAAGAGGAGCAGGGTATCCAC-TG--------CCTGAAATCGGGGCATGCCA------------------C-CACATAACCTCACAAATG-CGTGT----ACACAATCGAAATATT--TTTATACATATGTCCGTCTGTGC--------------------------------------------------------------------CA---ATGTTCGGGCATAATCGTGATGTAATTCCTTGGC--TCTCGAAGACTA-TTGC---------------------------------------GGGTGGTATTTGCCCTGTAGCTG------------TGGC-G----CTCATAACT-
droPer2 scaffold_0:2151172-2151430 + TCGCTGGCGTTCTGGAGCATGTGGTCATGTATCCGCTGGACTCTGTTAAGGTGAGAG----------------------------------ACTTT---------------------------TC-CG------------C---------GGAAGAGGAGCAGGGTATCCAC-TG--------CCTGAAATCGGGGCATGCCA------------------C-CACATAACCTCACAAATG-CGTGT----ACACAATCGAAATATT--TGTA----TATGTCCGTCTGT------------------------------------------G--------------------------CCA---ATGCTCGGGCATAATCGTGATGTAATTCCTTGGC--TCTCGAAGACTA-TTGC---------------------------------------GGGTGGTATTTGCCCTGTAGCTG------------TGGC-G----CTCATAACT-
droWil2 scf2_1100000004921:973632-973918 - TAGCTGGTGTACTGGAGCATGTTGTCATGTATCCACTGGACTCGGTTAAGGTAAGTC----------------------------------T---------------------AAAAGTTT-AGAATGCC---CAAT--------------GTGGTGCAGTGA--------------------CT----------------TC------------------T-GACCTAACCTCACAAATTGCATCTCGGTCAATAT---------T--AGGC----AG----------TGTTG------------------CT---------------GCTGTTGTTGTTATTGTTTTCATTAAGGT-CTT---ATGCTTCGGCATAATCGTGATGTAATTCCTTGGT--TTGTGCTGGCAATTCACGAGGT-CTGC--TG-CCT-------ATGGCCTGC--CCGGTGT--------------GA-AAATATATGAAATGGAG-TA----CACTTCGCTC
droVir3 scaffold_12855:3386212-3386266 + TAGCGGGCGTATTGGAGCATATTGTCATGTATCCGCTGGACTCGGTTAAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:9803410-9803675 - TAGCGGGCGTATTGGAGCATGTTGTCATGTATCCGCTGGACTCGGTTAAGGTGAGTGTTTGTGTGTATATACAGTAATGATGTTGTTTTTCACTTTTCCAATGAACGCAAA-----------AGC-TGTG--TATGTAATC---------GAAGAAGTA------------------------CATAAA-------CATAGCG--------------------TACCTAACCTCACAATCG-CGCAT----ATC---------------TTTACCCATTCGTGTGTATGTGCATGTGCGTGTACCTGTGTTAGT----------------------GTGCTAGTGTTTTC------GT-CTT---ATGCCTCGGCATAATCGTGATGTAATT------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:6069115-6069172 + TAGCGGGCGTATTGGAGCATGTTGTCATGTATCCAATGGACTCGGTTAAGGTGAGTG----------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------T---------------------GACTGCAT-GGC-CGCC---TGGTAATC---------GGAGGAGCAGCGG--------------------CATGAA-------CATAACA------------------C-GACCTAACCTCACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTGCCCACG--TCTCGAGTGCAA-CCAAGAGTT-GCGT--TC-CTC-------ATTAAGAGC--TCGGTGT--------------GG-TA------------TAGCCA----CACATAGCTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................TGAA-------CATAACA------------------C-GACCTT...........................................................................................................................................................................................................................................................................................1811.00110000000000000000
............................................................................................................................................................................................A-------CATAACA------------------C-GACCTAACCTCA.....................................................................................................................................................................................................................................................................................2111.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGAGC--TCGGTGT--------------GG-TA------------T...................2011.00110000000000000000
.........................................................................................................................................................................................TGAA-------CATAACA------------------C-GACCTAACCT.......................................................................................................................................................................................................................................................................................2211.00101000000000000000
..............................................................................................................................CGCC---TGGTAATC---------GGAGGAGCA.................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
................GCATGTGGTCATGTATCCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.......................................................................................................................................GTAATC---------GGAGGAGCAGCGG--------------------CATG.....................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...........CTGGAGCATGTGGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15120.08100000001000000000
droSec2
TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------T---------------------GACTGCAT-GGC-CGCC---TGGTAATC---------GGAGGAGCAGCGG--------------------CATGAA-------CATAACA------------------C-GACCTAACCTCACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAAGCGTGATGTAATTGCCCACG--TCTTGAGTGCAA-CCAAGAGTT-GCGT--TC-CTC-------ATTAAGAGC--TCGGTGT--------------GG-TA------------TAGCCA----CACATAGCTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................CATGTATCCGCTGGACTCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0022000
............................GTATCCGCTGGACTCCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
..............................................CAAGGTGAGAG----------------------------------T---------------------GACTGCAT-G.....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................................CC---TGGTAATC---------GGAGGAGCAGT...............................................................................................................................................................................................................................................................................................................................................................2111.0011000
....................................................................................................................................................................................................................................................................GAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---C..................................................................................................................................................2111.0011000
............................................................................................................................C-CGCC---TGGTAATC---------GGAGG.....................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC-------ATTAAGAGC--TCGGTGT--------------GG-TA------------TAGCCA----..........2911.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................AATTGCCCACG--TCTTGAGTG......................................................................................................2011.0011000
............................GTATCCGCTGGACTCCGTCAAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
..........................ATGTATCCGCTGGACTCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
..................................................GTGAGAG----------------------------------T---------------------GACTGCAT-GGC-CG................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................C-CTC-------ATTAAGAGC--TCGGTGT--------------G....................................2111.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGC--TCGGTGT--------------GG-TA------------TAGC................2111.0010100
..............................................................................................................................CGCC---TGGTAATC---------GGAGGAG...................................................................................................................................................................................................................................................................................................................................................................1911.0010001
......................................................................................................................................................................................................................................................................................................................................................................................................................................T-GCGT--TC-CTC-------ATTAAGAGC--TC........................................................2111.0011000
dm3
TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------A---------------------GACTGCAT-GGC-CGCC---TGGTAATC---------GGAGGAGCAGCGG--------------------CATGAA-------CATAACA------------------C-GACCTAACCTCACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTGCCCACG--TCTCGAGTGCAA-CCAAGAGTT-GCGT--TT-CTC-------ATTAAGAGC--TCTGGGT--------------GG-TA------------TAGCCA--------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................AATTGCCCACG--TCTCGAGTGC.....................................................................................................21124.002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000010010
..........................ATGTATCCGCTGGACTCCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000
..................................................................................................................................................................................................................................................................CGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CC.......................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCGGGCGTGCTGGAGCATGTGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGCGTGCTGGAGCATGTGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.TGCGGGCGTGCTGGAGCATGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGCTGGAGCATGTGGTCATGTATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GACTCCGTCAAGGTGAGAG----------------------------------A---------------------G..............................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................CTGCAT-GGC-CGCC---TGGTAATC---------..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................CATGAA-------CATAACA------------------C-GACCTAA..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CTAT---------------CAATCGGAATT-T--TGTG----T..........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................GTCATGTATCCGCTGGACTCCGTCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCGGGCGTGCTGGAGCATGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CTAT---------------CAATCGGAATT-T--TGTG----...........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CATGTATCCGCTGGACTCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................TTGCCCACG--TCTCGAGTGCAA-CC................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................GAG----------------------------------A---------------------GACTGCAT-GGC-CGCC---TG.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGTT-GCGT--TT-CTC-------ATTAAGAGC--..........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................TGTATCCGCTGGACTCCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGGGCGTGCTGGAGCATGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC-------ATTAAGAGC--TCTGGGT--------------GG-..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGCTGGAGCATGTGGTCATGTATCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATGTGGTCATGTATCCGCTGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GCTGGACTCCGTCAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGAGC--TCTGGGT--------------GG-TA------------....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...CGGGCGTGCTGGAGCATGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GCTGGACTCCGTCAAGGTGAGAG----------------------------------A---------------------...............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TGAA-------CATAACA------------------C-GACCTAACC........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTT-GCGT--TT-CTC-------ATTAAG...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGAGC--TCTGGGT--------------GG-TA------------TAGCC...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCGGGCGTGCTGGAGCATGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................CTCACTAT---------------CAATCGGAATT-A--A..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CAATCGGAATT-T--TGTG----TG----------TGC............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AT---------------CAATCGGAATT-T--TGTG----TG----------...............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................TATCCGCTGGACTCCGTCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................T-CTC-------ATTAAGAGC--TCTGGGT--------------GG-TA------------....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TT-CTC-------ATTAAGAGC--TCTGGGT--------------G....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CATAATCGTGATGTAATTGCC.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AACCTCACTAT---------------CAATCGGAATA-......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......CGTGCTGGAGCATGTGGTCATGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................A-CCAAGAGTT-GCGT--TT-CTC-------ATT..................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ACTCCGTCAAGGTGAGAG----------------------------------A---------------------GA.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................................C-GACCTAACCTCACTAT---------------CAATCGGAAT........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGAGTGCAA-CCAAGAGTT-GCGT--T.................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.................CATGTGGTCATGTATCCGCTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCGGGCGTGCTGGAGCATGTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........TGCTGGAGCATGTGGTCATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.........................................................................................................................................................................................................................................CACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGC............................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTGGTCATGTATCCGCTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAGTGCAA-CCAAGAG...........................................................................................1811.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TAACA------------------C-GACCTAACCTCACTAC---------------..................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CG---CTGCTTTGGCATAATCGTA................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GAGAG----------------------------------A---------------------GACTGCAT-GGC-CGC...............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................................................GTGAGAG----------------------------------A---------------------GACTGCAT-GGC-C.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................TGTGGTCATGTATCCGCTGGACTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GAG----------------------------------A---------------------GACTGCAT-GGC-CGCC---TGT........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................GTATCCGCTGGACTCCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TAATTGCCCACG--TCTCGAGTG......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................CTGGACTCCGTCAAGGTGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................................................................................................GTAATC---------GGAGGAGCAGCGG--------------------CA.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GCTTTGGCATAATCGTGATG.............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................TCATGTATCCGCTGGACTCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CCG---CTGCTTTGGCATAATCGTGATG.............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CG--TCTCGAGTGCAA-CCAAG.............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............TGGAGCATGTGGTCATGTATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................AT---------------CAATCGGAATT-T--TGTG----TG----------TG.............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CCCACG--TCTCGAGTGCAA-CCAAGAGT..........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................................GTGAGAG----------------------------------A---------------------GACTGCAT-GGC-CG................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................TGGTCATGTATCCGCTGGACTCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTGGTCATGTATCCGCTGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTGGTCATGTATCCGCTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-GCGT--TT-CTC-------ATTAAGAGC--ATC.......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CAGCGG--------------------CATGAA-------CATAACA------------------C-G................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................CAGCGG--------------------CATGAA-------CATAACC------------------G-C................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
droEre2
TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCAGTCAAGGTGAGAC----------------------------------T-------------------------GCAT-TGC-CGCC---TGGTAATC---------GGAGGAGCAGC-----------------------ATGAA-------CATAACCCA-----C--------C-C-GACCTAACCTCACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTGGGCATAATCGTGATGTAATTCCCCACG--TCTCGAATGCAA-CCAAGAGTT-GCGC--TC-CTC-------ATTAATAGC--TCTGGGT--------------GG-TA------------AAGCCA--------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................G----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTGGG..........................................................................................................................................2011.0011000000
...............................................................................................................................................................................................................................GACCTAACCTCACTAT---------------CAATCGGAAT........................................................................................................................................................................................................................................................2611.0010000010
droYak3
TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCACTGGACTCTGTCAAGGTGAGAC----------------------------------T-------------------------GCAT-TGC-CGCC---TGGTAATC---------GGAGGAGCAGC-----------------------ATGAA-------CATAACC------------------C-GACCTAACCTCACTAT---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTCGGCATAATCGTGATGTAATTCCCCACG--TCTCGAGTGCAA-CCAAGAGTT-GCGT--TC-CTC-------ATTAAGAGC--TCTGGGT--------------GG-TA------------TAGCCAGATAC---------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................GAC----------------------------------T-------------------------GCAT-TGC-CGCC---TGGTA......................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
..................ATGTGGTCATGTATCCACTGGACTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
..................................ACTGGACTCTGTCAAGGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.................CATGTGGTCATGTATCCACTGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
........GTGCTGGAGCATGTGGTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
droEug1
TTGCGGGTGTACTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------A-------------------------TCAT-TAC-GGCC---TGGTAATA---------GGAGAAGGAGCA-----------------------TAAG------------CC----CGACCAT-TAATCATAAACCTAACCTCACTAA---------------CAATCGGAACA-T--TGTG----TG----------TGCCA------------------CC---------------GCCG--------------------------CTG---CTGCTTTGGCATAATCGTGATGTAATTCGTTGGT--TCTTGAGTGCAA-CTAAGAGTT-CCGT--AC-C-CGTTGCCCAATAAGA-C--TCTAGGT--------------GG-TA------------TAGCCA----C---------SizeHit CountTotal NormTotal
No Reads
droBia1
TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAA----------------------------------T-------------------------GGCT-TAC-CGCC---TGCT--TCCCATGACCAGGACGAG---CAT--------------------AATGGG-------CAGCACCCCGCCGACCCCAGAGCCATAAACCTAACCTCACTAA---------------CCGTCTGAATGTTTTTGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTCCTCGGG--TCTCGAGTGCAG-CCAAGAGTT-CCGT--TC-CCCATTTCCCATTAGGAGC--TCTAGGT---------------G-TA------------TAGCC---------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTGCGGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------A-------------------------GCAT-TGC-CGCC---CGGTAACC---------GGAGCAGGAGCCT--------------------CATAAA-------CAGAACC----CGACCC---GACCATAAACCTAACCTCACTAA--------------ACAGTCGGAATTTT--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTCCTCGGG--TCTCGAGTGCAA-CCAAGAGTT-CCGC--TC-CCCGATTCCCATTAAGAGC--TCTGGGT--------------GG-TG------------TAGCG-----C--TTAG---SizeHit CountTotal NormTotal
No Reads
droEle1
TTGCGGGTGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAT----------------------------------C---------------------G---GCGT-TACCCGTCCGGTGGTAATC---------GGAGGAGGAGCA-----------------------TAAT--AC-GG-----------------------CATAAACCTAACCTCACTAA---------------CCATCGGAATT-T--TGTG----TG----------TGCCA------------------CCGTCGCCATCGCCGCTGCCG--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTCCTCGGG--TATCAACTGCAAACCAAGAGTT-TCCCAGTC-CCA-------ATGAACAGC--TTTAGGT--------------GG-AA------------TAGCCA----C---------SizeHit CountTotal NormTotal
No Reads
droRho1
TTGCTGGCGTGCTGGAGCATGTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGAG----------------------------------C---------------------------GT-TACCCGCC---TGGTAACC---------GGAGGAG---CA-----------------------TAAT--AC-----------------------GGCCATAAACCTAACCTCACTAC---------------CAATCGGAATT-T--TGTG----TG----------TGCC---------------------------------------G--------------------------CCGCTTCTGCTTTGGCATAATCGTGATGTAATTTCTCGGG--TATCAACTGCAA-CCAAGAGTT-CC--------CC-------ATTCTCAGC--TTTGCGT--------------GG-T---------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTGCTGGCGTGCTGGAGCATGTGGTCATGTATCCACTGGACTCCGTCAAGGTGAGCG----------------------------------C---------------------------ACTGGA-CGTC---TGGTAATC---------GGAGGAG---CA-----------------------TAAA-------G---C---------------TACCATAAACCTAACCTCACTAA---------------CAATCGGAATTTT--TGTG----TG----------TGCC---------------------------------------G--------------------------CCG---CTGCTTTGGCATAATCGTGATGTAATTCCTCGGG--TCTCGAGTGCAG-CCAAGAGGTCCCGC--TCCCCC-------ATTAAGAGC--TTTAGGT--------------AG-TA------------AAGT----------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTGCGGGCGTGCTGGAGCACTTGGTCATGTATCCGCTGGACTCCGTCAAGGTGAGCG----------------------------------CCCTT-CCAGCGAA-------------------C-CAGC---TGGTAACC---------GGAGGAG---CG-----------------------TAAA--CA-AG--C-----------------AGGCAT--ACCTAACCTCACAAATG-CGCGT----ACACAATCG-AATT-T--TGTG----AG----------TGCC---------------------------------------A---------------------AGTGCCCA---CTGCTTAGATATAATCGTGATGTAATTCCTCGGGCACCTCGAGTGCAG-CCAAGAGCT-CTC--------------------GGGGCT-TC-----GGTTTTTG----GGAGCCA------------TAGC----------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTGCTGGCGTGCTGGAGCATGTGATCATGTATCCACTGGACTCAGTCAAGGTAAGTG----------------------------------CCCTT-CCATCGAACCGAATTCGACTG-----------C---AGGTAACC---------GGAGGAGGAGGAGGAGGAGCACTTGCCCAAGAGTATAAA--CA-AG--CATCA------------------T-AACCTAACCTCACAAATC-CGTGT----ACACAAACAACAAA---------------------------T---------------------------------------T--------------------------CCT---ATGCTCTGGCATAATCGTGATGTAATTCCTTGGG--TTTTAAGTGCAA-CCCAGAGCT-CTGG--TG------------------GCTCTTTTGGG--------------GG-TT------------TAGAA-----T---------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................GATCATGTATCCACTGGACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................TCGTGATGTAATTCCTTGGG--T..............................................................................................................2111.001000010
...........................TGTATCCACTGGACTCAGTCAAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
......................................................................................................................................................GGAGGAGGAGGAGGAGGAGC......................................................................................................................................................................................................................................................................................................................................................20200.051000001
droBip1
TTGCGGGCGTGCTGGAGCATGTGATCATGTATCCGCTGGACTCAGTCAAGGTAAGCG----------------------------------CCCTG-CCACCGAGCC------GGCTG------G-TGGC---AGGTAACC---------GGAGGAGCACTTG------------TCCAAGAGTATAAA--CA-AG-----------------------CA--TACCTAACCTCACAAACG-CGTGT----ACACAAACAAAAAT-T--CGTA---------------------------------------------------------------------------------------------TGCTCTGGCATAATCGTGATGTAATTCCTCGGG--TTTTTAGTGCAA-CCGAGAGCT-CTG--------------------GGGGC--TCTTT---------G----GGGG-TT------------TAGA----------------SizeHit CountTotal NormTotal
No Reads
dp5
TCGCTGGCGTTCTGGAGCATGTGGTCATGTATCCGCTGGACTCTGTTAAGGTGAGAG----------------------------------ACTTT---------------------------TC-CG------------C---------GGAAGAGGAGCAGGGTATCCAC-TG--------CCTGAAATCGGGGCATGCCA------------------C-CACATAACCTCACAAATG-CGTGT----ACACAATCGAAATATT--TTTATACATATGTCCGTCTGTGC--------------------------------------------------------------------CA---ATGTTCGGGCATAATCGTGATGTAATTCCTTGGC--TCTCGAAGACTA-TTGC---------------------------------------GGGTGGTATTTGCCCTGTAGCTG------------TGGC-G----CTCATAACT-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................TCGTGATGTAATTCCTTGGC--TCTCGA.........................................................................................................2611.0010000000010
........................TCATGTATCCGCTGGACTCTGTTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
.........TTCTGGAGCATGTGGTCATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................ATCCAC-TG--------CCTGAAATCGGGG............................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................CATAATCGTGATGTAATTCC......................................................................................................................2011.0010100000000
.....GGCGTTCTGGAGCATGTGGTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
......GCGTTCTGGAGCATGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
droPer2
TCGCTGGCGTTCTGGAGCATGTGGTCATGTATCCGCTGGACTCTGTTAAGGTGAGAG----------------------------------ACTTT---------------------------TC-CG------------C---------GGAAGAGGAGCAGGGTATCCAC-TG--------CCTGAAATCGGGGCATGCCA------------------C-CACATAACCTCACAAATG-CGTGT----ACACAATCGAAATATT--TGTA----TATGTCCGTCTGT------------------------------------------G--------------------------CCA---ATGCTCGGGCATAATCGTGATGTAATTCCTTGGC--TCTCGAAGACTA-TTGC---------------------------------------GGGTGGTATTTGCCCTGTAGCTG------------TGGC-G----CTCATAACT-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTAGCTG------------TGGC-G----CTC.......1812.002200000
.........................CATGTATCCGCTGGACTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................CATGTATCCGCTGGACTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
TAGCTGGTGTACTGGAGCATGTTGTCATGTATCCACTGGACTCGGTTAAGGTAAGTC----------------------------------T---------------------AAAAGTTT-AGAATGCC---CAAT--------------GTGGTGCAGTGA--------------------CT----------------TC------------------T-GACCTAACCTCACAAATTGCATCTCGGTCAATAT---------T--AGGC----AG----------TGTTG------------------CT---------------GCTGTTGTTGTTATTGTTTTCATTAAGGT-CTT---ATGCTTCGGCATAATCGTGATGTAATTCCTTGGT--TTGTGCTGGCAATTCACGAGGT-CTGC--TG-CCT-------ATGGCCTGC--CCGGTGT--------------GA-AAATATATGAAATGGAG-TA----CACTTCGCTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................GTAATTCCTTGGT--TTGTGCTGGC.....................................................................................................2311.00100010
...CTGGTGTACTGGAGCATGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
.......................................................................................................................................................................................................................................................................................................................................................................................ATAATCGTGATGTAATTCCTT....................................................................................................................2111.00101000
...................................................................................................................................................................................................................................................................................................TTG------------------CT---------------GCTGTTGTTGTTATTG.......................................................................................................................................................................21120.08101000
droVir3
TAGCGGGCGTATTGGAGCATATTGTCATGTATCCGCTGGACTCGGTTAAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......CGTATTGGAGCATATTGTCATGTATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
TAGCGGGCGTATTGGAGCATATTGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
..................ATATTGTCATGTATCCGCTGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
........GTATTGGAGCATATTGTCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
..........................ATGTATCCGCTGGACTCGGTTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000001000000000000000000000000000
....GGGCGTATTGGAGCATATTGTCATGTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
............................GTATCCGCTGGACTCGGTTAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
............TGGAGCATATTGTCATGTATCCGCTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
........GTATTGGAGCATATTGTCATGTATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
......................TGTCATGTATCCGCTGGACTCGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
droMoj3
TAGCGGGCGTATTGGAGCATGTTGTCATGTATCCGCTGGACTCGGTTAAGGTGAGTGTTTGTGTGTATATACAGTAATGATGTTGTTTTTCACTTTTCCAATGAACGCAAA-----------AGC-TGTG--TATGTAATC---------GAAGAAGTA------------------------CATAAA-------CATAGCG--------------------TACCTAACCTCACAATCG-CGCAT----ATC---------------TTTACCCATTCGTGTGTATGTGCATGTGCGTGTACCTGTGTTAGT----------------------GTGCTAGTGTTTTC------GT-CTT---ATGCCTCGGCATAATCGTGATGTAATT------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.AGCGGGCGTATTGGAGCATGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100
......................................................................................TTTTCACTTTTCCAATGAACGCA...................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
............................GTATCCGCTGGACTCGGTTAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droGri2
TAGCGGGCGTATTGGAGCATGTTGTCATGTATCCAATGGACTCGGTTAAGGTGAGTG----------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................GTTGTCATGTATCCAATGGACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110

Generated: 05/18/2015 at 10:31 PM