ID:

dsi_16229

 Coordinate:

3l:18610185-18610334 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TGCTGCTGACCCCCATGGAAGCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACCCACATCCAGTGGACAGTACCGGAAATCTTTGTAAATGCATACTTTAGGCTTTACAGATTTTTCGACTGTCGGCATAGTGCAGGTGTTTGAGCTTTTGACTTTTTGGGGTGTCTGAAGGTCGCTGCTGTTGTCATCGGACATTTGCATGTCTTCTGCGAGTTTTGTTTATGCAATTTTCGTGGGTAACGGAA
**************************************************************.....((.((((((..((((((..((((((((.((.........)))))))))).)))))))))))).))...........*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 SRR618934
dsim w501 ovaries
 M023
head
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
......................................................................................................................TTTCGACTGTCGGCATAGTGCAGGT........................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..........CCCCATGGAAGCCCAGAGTCCGGA........................................................................................................................................................................................................................ 24 0 1 2.00 2 0 0 0 0 0 0 1 0 1 0 0
.........................................................................................................................................GCAGGTGTTTGAGCTTTTGACT........................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TTCGACTGTCGGCATAGTGCAGGTGG......................................................................................................... 26 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CGCTGCTGTTGTCATCGGG..................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TTCGACTGTCGGCATAGTGCAGGTGT......................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................ACAGATTTTTCGACTGTCGGT...................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
....................GCCCAGAGTCCGGATGACCACAT............................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
..............................................................ATCCAGTGGACAGTACCGGA........................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................CGGACATTTGCATGTCTTCTGCGAGT............................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................ATGACCACATGCAAAATGT...................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................GTTGTCATCGGACATTTGCAT............................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................TAGGCTTTACAGATTTTTCGACTGG.......................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TAGGCTTTACAGATTTTTCGACTGT.......................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTTTCGACTGTCGGCATAGTGCAGG............................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................TTTTCGACTGTCGGCATAGT................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CTGTTGTCATCGGACATT................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................TTTCGACTGTCGGCATAGTGC............................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................AAGCCCAGAGTCCGGAT....................................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.......GACCCCCATGGAAGCCCAGAGTCCGGAT....................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................GCCCAGAGTCCGGATGACC................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................GACTGTCGGCATAGTGCAGG............................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAAGGTCGCTGCTGT............................................................... 15 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AGGTCGCTGCTGTTCT............................................................ 16 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................AGCTTTTGACTTTCTGGAGTTTCTG............................................................................. 25 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.....CTGAGCCCCATGGAGCCCCA................................................................................................................................................................................................................................. 20 3 10 0.20 2 0 0 0 0 0 0 0 0 2 0 0
.......................................................................................................................................................................TGTCTGAGGGTCGCT.................................................................... 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................GTCGGCATAGTTCAG............................................................................................................. 15 1 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................GCTGTCGGCAGAATGCAGGT........................................................................................................... 20 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0
............................TCCGAAGGACCACCTGCAAA.......................................................................................................................................................................................................... 20 3 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................TGGGGTATCTGGAGGTC....................................................................... 17 2 17 0.06 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................ATACTTGAGGATTGACAGA...................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................TCTGAAGGTCGCGGGT................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................GCTGCTGTTGTCGTCGGATTT.................................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACGACGACTGGGGGTACCTTCGGGTCTCAGGCCTACTGGTGTACGTTTTACATTAATGGGTGTAGGTCACCTGTCATGGCCTTTAGAAACATTTACGTATGAAATCCGAAATGTCTAAAAAGCTGACAGCCGTATCACGTCCACAAACTCGAAAACTGAAAAACCCCACAGACTTCCAGCGACGACAACAGTAGCCTGTAAACGTACAGAAGACGCTCAAAACAAATACGTTAAAAGCACCCATTGCCTT
***********************************************************************************************************.....((.((((((..((((((..((((((((.((.........)))))))))).)))))))))))).))...........************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
............................................................................................................................................................TGGAAAACACCACAGACTAC.......................................................................... 20 3 7 4.71 33 11 16 0 2 0 1 1 2 0
.....................................................................ACTGTCATGGCCTTTAGAAAC................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................GTCACCTGTCACGGCCTTTAGAAACAT.............................................................................................................................................................. 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................GTGTAGGTCACCTGTCATGGC.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................CTCAGGCCTACTGGTGTACGT............................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.................................................................GTCACCGGTCACGGCCTTTAGAAACAT.............................................................................................................................................................. 27 2 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................................GTAGGTCACCTGTCATGGC.......................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................................TCCGAAATGTCTAAAAAGCTG............................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................GGAAAACACCACAGACTAC.......................................................................... 19 3 20 0.25 5 0 5 0 0 0 0 0 0 0
............................................................................................................................................................TGGAAAACACCACAGACT............................................................................ 18 2 5 0.20 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................TAGCTGAGAGTCGTATC.................................................................................................................. 17 3 20 0.15 3 0 0 0 0 3 0 0 0 0
.............................................................................................................................................................GGAAAACACCACAGACT............................................................................ 17 2 19 0.11 2 0 0 0 0 2 0 0 0 0
....................................TAGTGTACCTTTTACAATAAT................................................................................................................................................................................................. 21 3 20 0.10 2 0 0 2 0 0 0 0 0 0
......................................................................................................................ATAGCTGAGAGTCGTATC.................................................................................................................. 18 3 20 0.10 2 0 0 2 0 0 0 0 0 0
....................................................................................................................AAAAAGCTTCCAGCAGTAT................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 2 0 0
...................................................ATTAATGGTTGTTGGTCA..................................................................................................................................................................................... 18 2 13 0.08 1 0 0 0 0 0 0 0 0 1
........................................................................................................TCCGAACTGTCTAAGTAGC............................................................................................................................... 19 3 15 0.07 1 1 0 0 0 0 0 0 0 0
.................................................................................................................TCTACAAAGCTGACA.......................................................................................................................... 15 1 15 0.07 1 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................GTGGAAAACACCACAGACT............................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1
.....................................................................CCTGTCATGGCGCTTA..................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:18610135-18610384 - dsi_16229 TGCTGCTGACCCCCATGGAAGCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACCCACATCCAGT----------------------------------------------------------------------GGACA-GTACCGGAAATCTTT-GTAAA------------TGCATACTTTA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTCGACTGTCGGCATAGTGCAGGTGT---------TTGAGCTTTTGACTTTTT-GGGGTGTCT--GAAGGTCGCTGCTGTTGTC----ATC--GGACATTTGCATGTCTTCTG--------CG-AGTT-TTGTTTATGCAATTTTCGTG-------------------GGTAA----CGGAA
droSec2 scaffold_19:953301-953549 - TGCTGCTGACCCCCATGGAAGCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACCCACATCCAGT----------------------------------------------------------------------GGACA-GTACCGGAAATCTTT-GTAAA------------TGCATACT-TA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTCGACTGTCGGCATAGTGCAGGTGT---------TTGAGCTTTTGACTTTTT-GGGGTGTCT--GAAGGTCGCTGCTGTTGTC----ATC--GGACATTTGCATGTCTTCTG--------CG-CGTT-TTTTTTATGCAATTTTCGTG-------------------GGTAA----CGGAA
dm3 chr3L:18988331-18988580 - TGCTGCTGACCCCCATGGAAGCCCAGAGTCCGGATGACCACATGAAAAATGTAATTACCCACATCCAGT----------------------------------------------------------------------GGACA-GTACCGGAAATCTTT-GTAAA------------TGCATACTTTA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTCGACTGTCGGCATAGTGCAGGTGT---------TTGAGCTTTTGACTTTTT-GGGGTGTCT--GAAGGTCGCTGCTGTTGTC----ATC--GGACATTTGCATGTCTTCTG--------CG-CGTT-TTGTTTATGCAATTGTCGTG-------------------GGTAA----AGGAA
droEre2 scaffold_4784:18807039-18807291 - TGCTGCTGACCCCCATGGAGCCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACCCACATTAATG--ACCACAT-------------------------------------------------------------GGACA-GTACCGGAAATCTTT-GTAAA------------TGCACA--------------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTTCTCCGCCTGTCGGCATAGTGCAGGTTT---------TAGAGCTTTTGACTTTTT-GGGGTGTCT--GAAGGTCGCTGCTGTTGTC----ATC--GGACATTTGCATGTCTTTTG--------CG-CGTT-TTGTTTATGCAATTTTCGTG-------------------GGTAA----AGGAA
droYak3 3L:21612953-21613198 + TGCTGCTGACCCCCATGGAAGCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACCCACATCCAGT----------------------------------------------------------------------GGACA-GTGCCGGAAATCTTT-GTAAA------------TGCATA--------------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTTCTCCGACTGTCGGCTTAGTGCAGGTTT---------TTGAGCTTTTGAATTTTT-CGGATGCCT--GAAGGTCGCTGCTGTTGTC----ATC--GGACATTTGCATGTCTTGTG--------CG-CGTT-TTGTTTATGCAATTTTCGTG-------------------GGTAA----AGGAA
droEug1 scf7180000409471:494042-494281 + TGCTGCTGACCCCCATGGAACCCCAAAGTCCGGATGACCATATGCAAAATGTAATTACCA-AATTCTAT----------------------------------------------------------------------ACTCA-CTACCGGAAATGTTT-GTAAA------------TGGAT------------------------------------------------------------------------------------------------------------------------TTTAGA------------GATTATTTCGACTGTAGATATAATGCAGGTGT---------TTGAGC-TTTGACTTTTT-TCGGTGTCT--GAAGGTCGATGCTGTTGTC----ATC--GGACATTTGCATGTCTTTTG--------CG-TGTT-TTGTTTATGCAATTTTTGTG-------------------GGTAT----ACCAG
droBia1 scf7180000302529:506043-506282 + TGCTGCTGACACCCATGGAGCCCCAGACCCCGGAGGACCACATGCAAAATGTAAATACCCAACTTCCTC----------------------------------------------------------------------AGGGA-CTGCCGGAAACGCTT-GTAGT------------CGGCT------------------------------------------------------------------------------------------------------------------------TTTAGA------------GATTTTTCCGACCGTATACACTGGGCAGGTGT---------TTGAGC-TTTGACTTTTT-GGGCTGTCT--GAAGGTCGGTGCTGTTGTC----ATC--GGACGTTTGCATGTCTCTTG--------CG-CGC--TTGTTTATGCAATTTTCGTG-------------------G-TAC---ACACAA
droTak1 scf7180000415184:27787-27992 + TGCTGCTGACACCCATGGAACCCCAAAGTCCGGAGGATCACATGCAAAATGTAATTACCCAAATTCTGT----------------------------------------------------------------------TGAGA-GTGCCGGAAACGTTT-GTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCAGGTGT---------TTGAGC-TTTGACTTTTT-GGGGTGTCT--GAAGGTCGATGCTGTTGTC----ATC--AGACATTTGCATGTCTTTTT--------CG-CGTT-TTGTTTATGCAATTTTCGTG-------------------GGTAT----ACACA
droEle1 scf7180000491249:6267595-6267840 - TGCTGCTTACCCCCTTCGAGCCCCAAAGTCCGGATGATCACATGCAAAATGTAATTAACCCAATCAAAT--CCTATATAGTTA--------------------------------------------------------AAGCG-GTGCCGAAAAT-----GGAAA------------TGTCTA------------------------------------------------------------------------------------------------------------------------TTTCC------------CATTTTTCCGACTGTAT-----TTACACGTGT---------CTGAGC-TTTGACTTTTTCGGGGGGTCT--GAAGGTCGGTGCTGTTGTC----ATC--GGACATTTGCATGTCTTTTG--------CG-CATTTTTGTTTATGCAATTTTCAGG-------------------GGTAC----AAGGA
droRho1 scf7180000761233:62137-62363 - TGCTGCTGACCCCCTTGGAGCCCCAAAGTCCGGATGATCATATGCAAAATGTAATTACCCAAATCCTATA---------------------------------------------------------------------AGAGT-GTGCCGGAAATGTTT-GT----------------------------------------------------------------------------------------------------------------------------------------------TTCT------------GATTTTTCCGACTGTAT-----TTACACGTGT---------CTGAGC-TTTGACTTTTT-GGGGTGTCT--GAAGGTCGGTGCTGTTGTC----ATC--GCAAATTTGCATGTCTTTTG--------CG-CATTTTTGTTTATGCAATTTT-GTG-------------------GGGAT----ATGAA
droFic1 scf7180000453824:350914-351150 - TGCTGCTGACCCCCATGGAGCCCCAGAGCCCGGATGACCACATGAAAAATGTAATTACCCAAATCCTAT----------------------------------------------------------------------TG--A-GAACCGGAAGTGTTTTCG-CCCG------------GTG------------------------------------------------------------------------------------------------------------------------GTGAGA------------CACCTTTCCGAACGTAGATATACTGCAAGTGT---------CTGAGC-TTTGACTTTTT-GGGGTGTCT--GAAGGTCGATTTTGTTGTC----ATC--GCCCATTTGCATGTCTT--G--------CG-CGTTTTTGTTTATGCAATTTT-GTG-------------------GGTAT----ACCAA
droKik1 scf7180000302251:36176-36410 - TGCTGCTGACCCCCATGGAGGCCCAGAGTCCGGATGAGCACATGCAAAATGTAATTACCC-----------------------TTTA--------------------------------------------------------A-AAAATCGAATTCATTTATA-A----------------------------------C------------------------------------------------------------------------------------------------------------------AATGTAGAATGTTATGACTGTTGTAAGGGGCCCAGTGT---------TGGGGT-TTTGACATTTTCGGGGTGTCT--GAAGGTCGATGCTGTTGTC----ATC--GGACATTAGCGTGTCTTTTG--------CGACGTTTTTGTTTATGCAATTTCTGTG-------------------GGTATATCACAAAA
droAna3 scaffold_13337:18452590-18452865 + TGTTGCTGACACCGATGGAACCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACTCATCGT-TTT----------------------------------------------------------------------AT-------TTGAAAATATTT------------------------------------------TGGGAAA---GGGTGGGTCCAAAGAGTCCTGTGACGT-----------------------------------------------------------------------------------------TCGAGT------GAAGTGCAAGTGTCTGAAGCGGTTGAGC-TTTGACTTTTTCGGGCTGTCT--GAAGGTCGATGCTGTTGTC----ATC--GTACATTTGCATGTTGTCTGTCCGTCTCCA-CGTT-TTGTTTATGCAATTTTCGTGACTGAGTAGTAGAGTACCAGGTAT----TTGAA
droBip1 scf7180000396741:1635578-1635856 + TGTTGCTGACACCCATGGAACCCCAAAGTCCGGATGATCACATGCAGAATGTAATTACTCATAGT--------------------------------------------------------------------------------------------TTT-ATATA------------AGCATATG---------TATATTAAGAGGAAGTGGGGTGGGTCTAAGGACTCCCGTGACGT-----------------------------------------------------------------------------------------TCTA------GTGGAATGCAAGTGTCTGAAGCGGTTGAGC-TTTGACTTTTTCGGGGTGTCT--GAAGGTCGATGCTGTTGTC----ATC--GTACATTTGCATGTTGTCTGTCTGTCTGCC-CGTT----TTTATGCAATTTTCGTGACTGAGTAGTAGAGT---AGGTAT----TTGAA
dp5 XR_group8:7063932-7064234 - dps_3347 TGATATTGACCCCGATGGAACACCAAAGCTCGGACGAGCACATGCAAAATGTAATTAACAAAAACCTATAC------------CCTA--------------------------------------------------------A-AAACCAGAAATCATTTATA-CTTTTGGGATACATACAAACA-TACATACATATAT------------------------------------GGTTGGAGTGGAGCGATTGTTGTGGCTGGGTATAATGTAGGTGTGTGTGTGTGGGTGTGTGTAT-GTTTTATAGTCTCTAGT--------------------ATAAAATGCAAGTGT---------TTGAGC-TTTGACTTTTT-GGGGGGTCTGTGAAGGTCGCTGCTGTTGTC----ATC--AGACATTTGCATGTCTTTA---------------------------------------------------------GTAT----ATGAA
droPer2 scaffold_36:242542-242828 + TGATATTGACCCCGATGGAACACCAAAGCTCGGACGAGCACATGCAAAATGTAATTAACAAAAACCTATAC------------CCTA--------------------------------------------------------A-AAACCAGAAATCATTTGTA-CTTTTGGGATACATGCATACA---------TATAT------------------------------------GGTTGGAGTGGAGCGATTGTTGTGGCTGGGTAT---------GTGTGTGTGTGGGTGTGTGTATGGTTTTATAGTCTCTAGT--------------------ATAAAATGCAAGTGT---------TTGAGC-TTTGACTTTTT-GGGGGGTCTGTGAAGGTCGCTGCTGTTGTC----ATC--AGACATTTGCAGGTCTTTA---------------------------------------------------------GTAT----ATGAA
droWil2 scf2_1100000004762:3326410-3326673 + dwi_2019 TGCTGCTGACTCCGTTGGATGCTCAAAGTCCGGATGAGCACATGCAAAATGTAATTATAA-AGCGCTAAA-------------ATG-ATTCAATGATTATGTCTTAAGTGATTAGCGTAGCTGTACCTAGGCTACCTATTG--ACGAACTGACTGTCTGTCCG-TCCG-----------------------------------------------------------------------------------------------------------------------T------------------------------------CCGTCCGTCT---------GTCGAAATGT---------CTGAGC-TTTGACTTTTT-GGGTGGTCT--GAAGGTCGCTTGGGTTGCCTGACATTAAAGACATTTGCATGTCGCGTT--------GA-C--TTTGTTTTATGCAATT---------------------------------------
droVir3 scaffold_13049:13440325-13440381 + TGTTATTAACGCCGTTGGAACCCCAGACGCCAGATGAGCACATGCAAAATGTAATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:13901553-13901612 - TGTTATTAACACCGCTGGAAATCCAATCGCTCGATGAGCACATGCAAAATGTAAATATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:18877482-18877539 + TGCTCTTGACACCGATGGAAACCCAGACGGCCGAGGAGCACATGCAAAATGTAATTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGCTGCTGACCCCCATGGAAGCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACCCACATCCAGT----------------------------------------------------------------------GGACA-GTACCGGAAATCTTT-GTAAA------------TGCATACTTTA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTCGACTGTCGGCATAGTGCAGGTGT---------TTGAGCTTTTGACTTTTT-GGGGTGTCT--GAAGGTCGCTGCTGTTGTC----ATC--GGACATTTGCATGTCTTCTG--------CG-AGTT-TTGTTTATGCAATTTTCGTG-------------------GGTAA----CGGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................T-TTCGACTGTCGGCATAGTGCAGGT..............................................................................................................................................................2512.00200200000000000000
..........CCCCATGGAAGCCCAGAGTCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000001100000000
.........................................................................................................................................................................................................................................................................................................................................................GCAGGTGT---------TTGAGCTTTTGACT.....................................................................................................................................2212.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................................TTCGACTGTCGGCATAGTGCAGGTGG---------...................................................................................................................................................2612.00202000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCTGCTGTTGTC----ATC--GGG......................................................................................1911.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................TTCGACTGTCGGCATAGTGCAGGTGT---------...................................................................................................................................................2611.00101000000000000000
..................................................................................................................................................................................................................................................................................................................ACA------------GATTT-TTCGACTGTCGGT.........................................................................................................................................................................2111.00100000001000000000
....................GCCCAGAGTCCGGATGACCACAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
..............................................................ATCCAGT----------------------------------------------------------------------GGACA-GTACCGGA....................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................C--GGACATTTGCATGTCTTCTG--------CG-AGT.......................................................2611.00100010000000000000
.................................ATGACCACATGCAAAATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTC----ATC--GGACATTTGCAT.............................................................................2111.00101000000000000000
...........................................................................................................................................................................................TA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTCGACTGG.............................................................................................................................................................................2511.00100100000000000000
...........................................................................................................................................................................................TA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTCGACTGT.............................................................................................................................................................................2511.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................TT-TTCGACTGTCGGCATAGTGCAGG...............................................................................................................................................................2511.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................TT-TTCGACTGTCGGCATAGT....................................................................................................................................................................2011.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGTC----ATC--GGACATT..................................................................................1811.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................T-TTCGACTGTCGGCATAGTGC..................................................................................................................................................................2111.00100000010000000000
..................AAGCCCAGAGTCCGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000010000000000
.......GACCCCCATGGAAGCCCAGAGTCCGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
....................GCCCAGAGTCCGGATGACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................GACTGTCGGCATAGTGCAGG...............................................................................................................................................................2011.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTCGCTGCTGT......................................................................................................1520.50100000000001000000
droSec2
TGCTGCTGACCCCCATGGAAGCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACCCACATCCAGT----------------------------------------------------------------------GGACA-GTACCGGAAATCTTT-GTAAA------------TGCATACT-TA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTCGACTGTCGGCATAGTGCAGGTGT---------TTGAGCTTTTGACTTTTT-GGGGTGTCT--GAAGGTCGCTGCTGTTGTC----ATC--GGACATTTGCATGTCTTCTG--------CG-CGTT-TTTTTTATGCAATTTTCGTG-------------------GGTAA----CGGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................T-TA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTCG..................................................................................................................................................................................2111.0010010
...............TGGAAGCCCAGAGTCCGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
..CTGCTGACCCCCATGGAAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.............CATGGAAGCCCAGAGTCCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTTGTC----ATC--GGACATTTGCA..............................................................................2611.0010010
...........................GTCCGGATGACCACATGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
..................AAGCCCAGAGTCCGGATGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
....................GCCCAGAGTCCGGATGACCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
....................GCCCAGAGTCCGGATGACCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.GCTGCTGACCCCCATGGAAGCCCAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
....................GCCCAGAGTCCGGATGACCACAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..................AAGCCCAGAGTCCGGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
TGCTGCTGACCCCCATGGAAGCCCAGAGTCCGGATGACCACATGAAAAATGTAATTACCCACATCCAGT----------------------------------------------------------------------GGACA-GTACCGGAAATCTTT-GTAAA------------TGCATACTTTA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTCGACTGTCGGCATAGTGCAGGTGT---------TTGAGCTTTTGACTTTTT-GGGGTGTCT--GAAGGTCGCTGCTGTTGTC----ATC--GGACATTTGCATGTCTTCTG--------CG-CGTT-TTGTTTATGCAATTGTCGTG-------------------GGTAA----AGGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........CCCCCATGGAAGCCCAGAGTCCGGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000002000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................T-TTCGACTGTCGGCATAGTGC..................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GACTTTTT-GGGGTGTCT--GAA..................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GGGGTGTCT--GAAGGTCGC............................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CATGGAAGCCCAGAGTCCGGATGACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGTC----ATC--GGACATTTGCATGT...........................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CCCCCATGGAAGCCCAGAGTCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGGAAGCCCAGAGTCCGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCCCAGAGTCCGGATGACCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
...................AGCCCAGAGTCCGGATGACCACATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGCTGACCCCCATGGAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCCCAGAGTCCGGATGACCACATGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000
.......................CAGAGTCCGGATGACCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CCATGGAAGCCCAGAGTCCGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
............CCATGGAAGCCCAGAGTCCGGATGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............ATGGAAGCCCAGAGTCCGGATGACCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GTCGCTGCTGTTGTC----ATC--GGACAT...................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGCTGCTGACCCCCATGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAAGCCCAGAGTCCGGATGACCACATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GCTTTTGACTTTTT-GGGGTGT.........................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TTTACA------------GATTT-TTCGACTGTC............................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TTTTGACTTTTT-GGGGTGT.........................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
...............TGGAAGCCCAGAGTCCGGATGACCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCT--GAAGGTCGCTGCTGTTG....................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........ACCCCCATGGAAGCCCAGAGTCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................TTTTGACTTTTT-GGGGTGTCT--.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............ATGGAAGCCCAGAGTCCGGATGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCAGAGTCCGGATGACCACATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................GCCCAGAGTCCGGATGACCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTTT-GGGGTGTCT--GAAGGTCG.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CCCACATCCAGT----------------------------------------------------------------------GGACA-GTACCGGAAATC................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..................AAGCCCAGAGTCCGGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......TGACCCCCATGGAAGCCCAGAGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-TTGTTTATGCAATTGTCGTG-------------------GGT...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....GCTGACCCCCATGGAAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCTGCTGTTGTC----ATC--GGA......................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................AGAGTCCGGATGACCACAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGCCCAGAGTCCGGATGACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CTTTTT-GGGGTGTCT--GAAGGT...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AGCTTTTGACTTTTT-GGGGTGT.........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CAGT----------------------------------------------------------------------GGACA-GTACCGGAAAT.................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................CCAGAGTCCGGATGACCACATGAAAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TGTCT--GAAGGTCGCTGCTGTTGTC----A.............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCGCTGCTGTTGTC----ATC--GGACA....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCCAGAGTCCGGATGACCACATGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCCCAGAGTCCGGATGACCACATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCCCATGGAAGCCCAGAGTCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TT-GGGGTGTCT--GAAGGTCGCTG..........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................GCCCAGAGTCCGGATGACCACATGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............CCATGGAAGCCCAGAGTCCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTG--------CG-CGTT-TTGTTTATG............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CTTTTT-GGGGTGTCT--GAAGGTCGCTGC.........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................................................................................................................................................................................TTA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTC...................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................CA-GTACCGGAAATCTTT-GTA.........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................GAAGCCCAGAGTCCGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTC----ATC--GGACATTTGCATGTC..........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............CCATGGAAGCCCAGAGTCCGGATGACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................TTTTT-GGGGTGTCT--GAAGGTCGCTGC.........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......GACCCCCATGGAAGCCCAGAGTCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTCGACTGTCGGCATAGTGCAGGTGT---------T..................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCATGTCTTCTG--------CG-CGT.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GT---------TTGAGCTTTTGACTTTT..................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GGGGTGTCT--GAAGGTCGCT...........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
............................................................................................................................................GACA-GTACCGGAAATCTTT-GT..........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTT-TTCGACTGTCGGCATAGT....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGCCCAGAGTCCGGATGACCACATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................T-TTCGACTGTCGGCATAGTCA..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TACA------------GATTT-TTCGACTGT.............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TACCGGAAATCTTT-GTAAA------------TGC........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--------CG-CGTT-TTGTTTATGCAATT.......................................2211.0010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTTCTG--------CG-CGTT-TTGT.................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCCAGAGTCCGGATGACCACATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GTCT--GAAGGTCGCTGCTGTT.....................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........ACCCCCATGGAAGCCCAGAGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCCCATGGAAGCCCAGAGTCCGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGACCCCCATGGAAGCCCAGAGTCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGCCCAGAGTCCGGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
TGCTGCTGACCCCCATGGAAGCCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GACTTTTT-GGGGTGTCT--G....................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCAATTGTCGTG-------------------GGT...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTGTTTATGCAATTGTCGTG-------------------..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....CTGACCCCCATGGAAGCCCAGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GACTGTCGGCATAGTGCAGGTGT---------TTG................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GGGTGTCT--GAAGGTCGCT...........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................TACTTTA---------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTT-TTCGAC................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCCCATGGAAGCCCAGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGAGCTTTTGACTTTTT-GGGG............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTC----ATC--GGACATTTGCA..............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTCGTG-------------------GGTAA----AGGAC1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CATGGAAGCCCAGAGTCCGGATGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................CCCAGAGTCCGGATGACCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTCCGGATGACCACATGAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................T-TTCGACTGTCGGCATAGTGCAGGTG.............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CTTTTGACTTTTT-GGGGTGTCA--.....................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......TGACCCCCATGGAAGCCCAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
................................................................CCAGT----------------------------------------------------------------------GGACA-GTACCGGAAATCTT..............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTCGTG-------------------GGTAA----AGG..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGACTTTTT-GGGGTGTCT--GAA..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCAGAGTCCGGATGACCACATGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GACCCCCATGGAAGCCCAGAGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
TGCTGCTGACCCCCATGGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CAGT----------------------------------------------------------------------GGACA-GTACCGGAAATCTTT-GT..........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GTCGGCATAGTGCAGGTGT---------TTGAGC.............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....GCTGACCCCCATGGAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CT--GAAGGTCGCTGCTGTT.....................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGACCCCCATGGAAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGCTGCTGACCCCCATGGAGCCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACCCACATTAATG--ACCACAT-------------------------------------------------------------GGACA-GTACCGGAAATCTTT-GTAAA------------TGCACA--------------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTTCTCCGCCTGTCGGCATAGTGCAGGTTT---------TAGAGCTTTTGACTTTTT-GGGGTGTCT--GAAGGTCGCTGCTGTTGTC----ATC--GGACATTTGCATGTCTTTTG--------CG-CGTT-TTGTTTATGCAATTTTCGTG-------------------GGTAA----AGGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................CCAGAGTCCGGATGACCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
................GGAGCCCCAGAGTCCGGATGACCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.............................................................................................................................................................................................................................................................................................................................................TGTCGGCATAGTGCAGGC..............................................................................................................................................................1811.0010100000
.................GAGCCCCAGAGTCCGGATGACCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGCAATTTTCGTG-------------------GGTAA----A....2411.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTG-------------------GGTAA----AGGAA1911.0010000100
.......................CAGAGTCCGGATGACCACATGCAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...................GCCCCAGAGTCCGGATGACCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.............................................................................................................................................................................................................................................................................................................................................................GTTT---------TAGAGCTTTTGACTTTTT-GGGGT...........................................................................................................................2711.0010000100
...........................GTCCGGATGACCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
......................CCAGAGTCCGGATGACCACATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
droYak3
TGCTGCTGACCCCCATGGAAGCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACCCACATCCAGT----------------------------------------------------------------------GGACA-GTGCCGGAAATCTTT-GTAAA------------TGCATA--------------------------------------------------------------------------------------------------------------------GGCTTTACA------------GATTTCTCCGACTGTCGGCTTAGTGCAGGTTT---------TTGAGCTTTTGAATTTTT-CGGATGCCT--GAAGGTCGCTGCTGTTGTC----ATC--GGACATTTGCATGTCTTGTG--------CG-CGTT-TTGTTTATGCAATTTTCGTG-------------------GGTAA----AGGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................GCCCAGAGTCCGGATGACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300000030000
...............................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTTGTC----ATC--GGA......................................................................................1812.00220000000000
.............CATGGAAGCCCAGAGTCCGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000
.........................GAGTCCGGATGACCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
...................AGCCCAGAGTCCGGATGACCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTGTG--------CG-CGTT-TTGTTT...............................................2011.00100000010000
................GGAAGCCCAGAGTCCGGATGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..............................................................................................................................................................................................................................................................................................................................................GTCGGCTTAGTGCAGGTTT---------TTGAGCT............................................................................................................................................2611.00100100000000
......................................................................................................................................................................................................................................................................................................................................CTCCGACTGTCGGCTTAGTGC..................................................................................................................................................................2111.00100010000000
.......................CAGAGTCCGGATGACCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
....................GCCCAGAGTCCGGATGACCACAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.....................CCCAGAGTCCGGATGACCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...................AGCCCAGAGTCCGGATGACCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
...................AGCCCAGAGTCCGGATGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
..................................................................................................................................................................................................................................................................................................................ACA------------GATTTCTCCGACTGTCGGC.........................................................................................................................................................................2220.50100100000000
.................................................................................................................................................................................................................................................................................................................TACA------------GATTTCTCCGACTGTC............................................................................................................................................................................2020.50100000010000
droEug1
TGCTGCTGACCCCCATGGAACCCCAAAGTCCGGATGACCATATGCAAAATGTAATTACCA-AATTCTAT----------------------------------------------------------------------ACTCA-CTACCGGAAATGTTT-GTAAA------------TGGAT------------------------------------------------------------------------------------------------------------------------TTTAGA------------GATTATTTCGACTGTAGATATAATGCAGGTGT---------TTGAGC-TTTGACTTTTT-TCGGTGTCT--GAAGGTCGATGCTGTTGTC----ATC--GGACATTTGCATGTCTTTTG--------CG-TGTT-TTGTTTATGCAATTTTTGTG-------------------GGTAT----ACCAGSizeHit CountTotal NormTotal
No Reads
droBia1
TGCTGCTGACACCCATGGAGCCCCAGACCCCGGAGGACCACATGCAAAATGTAAATACCCAACTTCCTC----------------------------------------------------------------------AGGGA-CTGCCGGAAACGCTT-GTAGT------------CGGCT------------------------------------------------------------------------------------------------------------------------TTTAGA------------GATTTTTCCGACCGTATACACTGGGCAGGTGT---------TTGAGC-TTTGACTTTTT-GGGCTGTCT--GAAGGTCGGTGCTGTTGTC----ATC--GGACGTTTGCATGTCTCTTG--------CG-CGC--TTGTTTATGCAATTTTCGTG-------------------G-TAC---ACACAASizeHit CountTotal NormTotal
No Reads
droTak1
TGCTGCTGACACCCATGGAACCCCAAAGTCCGGAGGATCACATGCAAAATGTAATTACCCAAATTCTGT----------------------------------------------------------------------TGAGA-GTGCCGGAAACGTTT-GTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCAGGTGT---------TTGAGC-TTTGACTTTTT-GGGGTGTCT--GAAGGTCGATGCTGTTGTC----ATC--AGACATTTGCATGTCTTTTT--------CG-CGTT-TTGTTTATGCAATTTTCGTG-------------------GGTAT----ACACASizeHit CountTotal NormTotal
No Reads
droEle1
TGCTGCTTACCCCCTTCGAGCCCCAAAGTCCGGATGATCACATGCAAAATGTAATTAACCCAATCAAAT--CCTATATAGTTA--------------------------------------------------------AAGCG-GTGCCGAAAAT-----GGAAA------------TGTCTA------------------------------------------------------------------------------------------------------------------------TTTCC------------CATTTTTCCGACTGTAT-----TTACACGTGT---------CTGAGC-TTTGACTTTTTCGGGGGGTCT--GAAGGTCGGTGCTGTTGTC----ATC--GGACATTTGCATGTCTTTTG--------CG-CATTTTTGTTTATGCAATTTTCAGG-------------------GGTAC----AAGGASizeHit CountTotal NormTotal
No Reads
droRho1
TGCTGCTGACCCCCTTGGAGCCCCAAAGTCCGGATGATCATATGCAAAATGTAATTACCCAAATCCTATA---------------------------------------------------------------------AGAGT-GTGCCGGAAATGTTT-GT----------------------------------------------------------------------------------------------------------------------------------------------TTCT------------GATTTTTCCGACTGTAT-----TTACACGTGT---------CTGAGC-TTTGACTTTTT-GGGGTGTCT--GAAGGTCGGTGCTGTTGTC----ATC--GCAAATTTGCATGTCTTTTG--------CG-CATTTTTGTTTATGCAATTTT-GTG-------------------GGGAT----ATGAASizeHit CountTotal NormTotal
No Reads
droFic1
TGCTGCTGACCCCCATGGAGCCCCAGAGCCCGGATGACCACATGAAAAATGTAATTACCCAAATCCTAT----------------------------------------------------------------------TG--A-GAACCGGAAGTGTTTTCG-CCCG------------GTG------------------------------------------------------------------------------------------------------------------------GTGAGA------------CACCTTTCCGAACGTAGATATACTGCAAGTGT---------CTGAGC-TTTGACTTTTT-GGGGTGTCT--GAAGGTCGATTTTGTTGTC----ATC--GCCCATTTGCATGTCTT--G--------CG-CGTTTTTGTTTATGCAATTTT-GTG-------------------GGTAT----ACCAASizeHit CountTotal NormTotal
No Reads
droKik1
TGCTGCTGACCCCCATGGAGGCCCAGAGTCCGGATGAGCACATGCAAAATGTAATTACCC-----------------------TTTA--------------------------------------------------------A-AAAATCGAATTCATTTATA-A----------------------------------C------------------------------------------------------------------------------------------------------------------AATGTAGAATGTTATGACTGTTGTAAGGGGCCCAGTGT---------TGGGGT-TTTGACATTTTCGGGGTGTCT--GAAGGTCGATGCTGTTGTC----ATC--GGACATTAGCGTGTCTTTTG--------CGACGTTTTTGTTTATGCAATTTCTGTG-------------------GGTATATCACAAAASizeHit CountTotal NormTotal
No Reads
droAna3
TGTTGCTGACACCGATGGAACCCCAGAGTCCGGATGACCACATGCAAAATGTAATTACTCATCGT-TTT----------------------------------------------------------------------AT-------TTGAAAATATTT------------------------------------------TGGGAAA---GGGTGGGTCCAAAGAGTCCTGTGACGT-----------------------------------------------------------------------------------------TCGAGT------GAAGTGCAAGTGTCTGAAGCGGTTGAGC-TTTGACTTTTTCGGGCTGTCT--GAAGGTCGATGCTGTTGTC----ATC--GTACATTTGCATGTTGTCTGTCCGTCTCCA-CGTT-TTGTTTATGCAATTTTCGTGACTGAGTAGTAGAGTACCAGGTAT----TTGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................AACCCCAGAGTCCGGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............GATGGAACCCCAGAGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...TGCTGACACCGATGGAACCCCAGAGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................................................................................................................................................................................................GTGTCTGAAGCGGTTGAGC-TTTGACT.....................................................................................................................................2611.001000010
................GGAACCCCAGAGTCCGGATGACCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
......................CCAGAGTCCGGATGACCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............GATGGAACCCCAGAGTCCGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................GAACCCCAGAGTCCGGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...................ACCCCAGAGTCCGGATGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.GTTGCTGACACCGATGGAACCCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................GAGTCCGGATGACCACATGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................GAACCCCAGAGTCCGGATGACCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
droBip1
TGTTGCTGACACCCATGGAACCCCAAAGTCCGGATGATCACATGCAGAATGTAATTACTCATAGT--------------------------------------------------------------------------------------------TTT-ATATA------------AGCATATG---------TATATTAAGAGGAAGTGGGGTGGGTCTAAGGACTCCCGTGACGT-----------------------------------------------------------------------------------------TCTA------GTGGAATGCAAGTGTCTGAAGCGGTTGAGC-TTTGACTTTTTCGGGGTGTCT--GAAGGTCGATGCTGTTGTC----ATC--GTACATTTGCATGTTGTCTGTCTGTCTGCC-CGTT----TTTATGCAATTTTCGTGACTGAGTAGTAGAGT---AGGTAT----TTGAASizeHit CountTotal NormTotal
No Reads
dp5
TGATATTGACCCCGATGGAACACCAAAGCTCGGACGAGCACATGCAAAATGTAATTAACAAAAACCTATAC------------CCTA--------------------------------------------------------A-AAACCAGAAATCATTTATA-CTTTTGGGATACATACAAACA-TACATACATATAT------------------------------------GGTTGGAGTGGAGCGATTGTTGTGGCTGGGTATAATGTAGGTGTGTGTGTGTGGGTGTGTGTAT-GTTTTATAGTCTCTAGT--------------------ATAAAATGCAAGTGT---------TTGAGC-TTTGACTTTTT-GGGGGGTCTGTGAAGGTCGCTGCTGTTGTC----ATC--AGACATTTGCATGTCTTTA---------------------------------------------------------GTAT----ATGAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................GGAACACCAAAGCTCGGACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.............GATGGAACACCAAAGCTCGGACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.GATATTGACCCCGATGGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000000
..........................AGCTCGGACGAGCACATGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
....ATTGACCCCGATGGAACACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............ATGGAACACCAAAGCTCGGACGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
droPer2
TGATATTGACCCCGATGGAACACCAAAGCTCGGACGAGCACATGCAAAATGTAATTAACAAAAACCTATAC------------CCTA--------------------------------------------------------A-AAACCAGAAATCATTTGTA-CTTTTGGGATACATGCATACA---------TATAT------------------------------------GGTTGGAGTGGAGCGATTGTTGTGGCTGGGTAT---------GTGTGTGTGTGGGTGTGTGTATGGTTTTATAGTCTCTAGT--------------------ATAAAATGCAAGTGT---------TTGAGC-TTTGACTTTTT-GGGGGGTCTGTGAAGGTCGCTGCTGTTGTC----ATC--AGACATTTGCAGGTCTTTA---------------------------------------------------------GTAT----ATGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................C----ATC--AGACATTTGCAGGTCT.........................................................................2012.002200000
................GGAACACCAAAGCTCGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
.............................................................................................................................................................................ATACATGCATACA---------TATAT------------------------------------GGTTGGA..........................................................................................................................................................................................................................................................................2512.002200000
...................ACACCAAAGCTCGGACGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002101000
....................CACCAAAGCTCGGACGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGAAGGTCGCTGCT........................................................................................................1911.001100000
...................ACACCAAAGCTCGGACGAGCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....................CACCAAAGCTCGGACGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............................CGGACGAGCACATGCAAAATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTCGCTGCTGTTGT...................................................................................................1811.001001000
..ATATTGACCCCGATGGAACACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCTGCTGTTGTC----ATC--AGAC.....................................................................................2011.001100000
................GGAACACCAAAGCTCGGACGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.....................................................................................................................................................................................................TAT------------------------------------GGTTGGAGTGGAGCG..................................................................................................................................................................................................................................................................1811.001010000
...........................................................................................................................................................................................................................................................................AT---------GTGTGTGTGTGGGTGTG......................................................................................................................................................................................................................19190.051010000
droWil2
TGCTGCTGACTCCGTTGGATGCTCAAAGTCCGGATGAGCACATGCAAAATGTAATTATAA-AGCGCTAAA-------------ATG-ATTCAATGATTATGTCTTAAGTGATTAGCGTAGCTGTACCTAGGCTACCTATTG--ACGAACTGACTGTCTGTCCG-TCCG-----------------------------------------------------------------------------------------------------------------------T------------------------------------CCGTCCGTCT---------GTCGAAATGT---------CTGAGC-TTTGACTTTTT-GGGTGGTCT--GAAGGTCGCTTGGGTTGCCTGACATTAAAGACATTTGCATGTCGCGTT--------GA-C--TTTGTTTTATGCAATT---------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................GATGCTCAAAGTCCGGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300300
..................ATGCTCAAAGTCCGGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300030
.....................CTCAAAGTCCGGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
..................ATGCTCAAAGTCCGGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
.............GTTGGATGCTCAAAGTCCGGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201010
.........................AAGTCCGGATGAGCACATGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200
.............GTTGGATGCTCAAAGTCCGGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200110
.......GACTCCGTTGGATGCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
.................GATGCTCAAAGTCCGGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
..................ATGCTCAAAGTCCGGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200110
...TGCTGACTCCGTTGGATGCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.......................CAAAGTCCGGATGAGCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............TGGATGCTCAAAGTCCGGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..........................AGTCCGGATGAGCACATGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...TGCTGACTCCGTTGGATGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAGACATTTGCATGT...........................................................................1911.00100010
..................ATGCTCAAAGTCCGGATGAGCACATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..........................................................................................................................................................................................................................................................................................................................................................................CTGAGC-TTTGACTTTTT-GGGT............................................................................................................................2111.00100010
................GGATGCTCAAAGTCCGGATGAGCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
................GGATGCTCAAAGTCCGGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
........................................................................................TTCAATGATTATGTCTTAAGTGATTAGC.........................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
.........................AAGTCCGGATGAGCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................GCTCAAAGTCCGGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.............GTTGGATGCTCAAAGTCCGGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
........................AAAGTCCGGATGAGCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...TGCTGACTCCGTTGGATGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
...........CCGTTGGATGCTCAAAGTCCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...................TGCTCAAAGTCCGGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............CGTTGGATGCTCAAAGTCCGGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.......................CAAAGTCCGGATGAGCACATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.............GTTGGATGCTCAAAGTCCGGATGAGCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
.........................AAGTCCGGATGAGCACATGCAAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
...............TGGATGCTCAAAGTCCGGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
......................................................................................................CTTAAGTGATTAGCGTAGC....................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................................................................................................................................................TGTCTGTCCG-TCCG-----------------------------------------------------------------------------------------------------------------------T------------------------------------CCGTCC...................................................................................................................................................................................21200.10202000
...........................................................................................................................................................TCTGTCCG-TCCG-----------------------------------------------------------------------------------------------------------------------T------------------------------------CCGTCCGTCT---------......................................................................................................................................................................23200.05100010
.........................................................................................................................................................TGTCTGTCCG-TCCG-----------------------------------------------------------------------------------------------------------------------T------------------------------------CCGTCCGTCT---------T.....................................................................................................................................................................26200.05101000
droVir3
TGTTATTAACGCCGTTGGAACCCCAGACGCCAGATGAGCACATGCAAAATGTAATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................CAGATGAGCACATGCAAAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000001000000000000000000000000000000000000000000010
..................AACCCCAGACGCCAGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000001000001000000000000000000000000000000000000000000000
........ACGCCGTTGGAACCCCAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
.........CGCCGTTGGAACCCCAGACGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....ATTAACGCCGTTGGAACCCCAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
......................CCAGACGCCAGATGAGCACATGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000010000000000000000000000000000000000000000000
......................CCAGACGCCAGATGAGCACATGCAAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
.......AACGCCGTTGGAACCCCAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................ACCCCAGACGCCAGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.......AACGCCGTTGGAACCCCAGACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..................AACCCCAGACGCCAGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
.................GAACCCCAGACGCCAGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
...............TGGAACCCCAGACGCCAGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGTTATTAACACCGCTGGAAATCCAATCGCTCGATGAGCACATGCAAAATGTAAATATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................CCAATCGCTCGATGAGCACATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
................GGAAATCCAATCGCTCGATGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
................GGAAATCCAATCGCTCGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
TGCTCTTGACACCGATGGAAACCCAGACGGCCGAGGAGCACATGCAAAATGTAATTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:28 PM