ID:

dsi_16185

 Coordinate:

x:14506155-14506341 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-48.4 -48.3 -48.2 -48.0

Flybase annnotation

exon [x_14506342_14506526_-]; CDS [x_14506342_14506404_-]; exon [x_14505927_14506154_-]; CDS [x_14505927_14506154_-]; intron [x_14506155_14506341_-]

No Repeatable elements found

mature
star
  1. 2r:17636132-17636146 -
  2. dsi_16185  x:14506309-14506323 -

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTCTCGACGAGAATCCCTTCGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGGCGATAGAAGAGCGTGGAGAGAGAGCGCGGAAGCCGAAGAAAAAACCCATCGCACACACACGCACACGTACGCAAAGGAGGGGTGTTGGTGTGCGTGCCTGCGAGTGTGTGTGTTGGGTGCATTCGTCACATATGTTGAATGAATTGGTTTCTGATTGGGATTTCCCGGTTTTCCCCCGCAGGACCCCGCCATCCAGCAGGCACGACGACTCCAAAGCGGCGCCGCCCTTGT
********************************************************************.((..((......(((((.((..........(((((.(((((((((.(((((((((((((...............)))))))))..)))).))))))))).))))))).)))))........))...))****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 SRR902008
ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
.........................................................................................................................................................................................................................................TGCGGACCCCGCCATCCAGCAGGCACGA.......................... 28 3 1 2.00 2 0 0 2 0 0 0 0 0
..................TCGGGGAGCCCAATCTGGACAAT...................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0
..................................GGACAATCCGTTTGCGG............................................................................................................................................................................................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0
..................TCGGGGAGCCCAATCTGGACAATCC.................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................CGTCACATATGTTGAATG.......................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................CAGGCACGACGACTCCAAAGCGGCGCC........ 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................CGGTTTTCCCCCGCAGGACCCCG........................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................AGCGCGGACGCCGAA.................................................................................................................................................................................................. 15 1 3 1.00 3 3 0 0 0 0 0 0 0
...........................CCAATCTGGACAATCCGTT................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0
................CTTCGGGGAGCCCAATCTGGACAA....................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................................................................AAAGCGGCGCCGCCCTTGG 19 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................GTGGAGAGAGAGCGC............................................................................................................................................................................................................ 15 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................TGTTGAAGGAGTTGGTTTATG.............................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 1 0
..........................................................ATAGAAGATCGTGGAGAAA.................................................................................................................................................................................................................. 19 2 3 0.33 1 0 0 1 0 0 0 0 0
........AAGAATCCCGTCGGGGAGCCA.................................................................................................................................................................................................................................................................. 21 3 3 0.33 1 1 0 0 0 0 0 0 0
....................................ACAATCCCTTTGCGGT........................................................................................................................................................................................................................................... 16 1 4 0.25 1 0 0 0 0 0 0 0 1
..............CCCTTCGGGGAGCCA.................................................................................................................................................................................................................................................................. 15 1 16 0.13 2 0 0 0 0 2 0 0 0
..........GAATCTCTTCGGGGCGCCA.................................................................................................................................................................................................................................................................. 19 3 12 0.08 1 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................................................TTGCCCCGCAGGACC.............................................. 15 1 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................GCCATCCAGCAGACGCGCCG........................ 20 3 14 0.07 1 1 0 0 0 0 0 0 0
............ATACCTTCGGGGAGGCCC................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

CAGAGCTGCTCTTAGGGAAGCCCCTCGGGTTAGACCTGTTAGGCAAACGCCACTCCGCTATCTTCTCGCACCTCTCTCTCGCGCCTTCGGCTTCTTTTTTGGGTAGCGTGTGTGTGCGTGTGCATGCGTTTCCTCCCCACAACCACACGCACGGACGCTCACACACACAACCCACGTAAGCAGTGTATACAACTTACTTAACCAAAGACTAACCCTAAAGGGCCAAAAGGGGGCGTCCTGGGGCGGTAGGTCGTCCGTGCTGCTGAGGTTTCGCCGCGGCGGGAACA
******************************************************************************************.((..((......(((((.((..........(((((.(((((((((.(((((((((((((...............)))))))))..)))).))))))))).))))))).)))))........))...))******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M053
female body
 GSM343915
embryo
...........................................................................................................GTGTGTGTGCGTGTGCATGC................................................................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................ACCACGCGCACGGAC................................................................................................................................... 15 1 16 0.25 4 0 0 4 0 0
..............................................................................TGGCGCCTTCGGCTTCTG............................................................................................................................................................................................... 18 2 5 0.20 1 0 1 0 0 0
..........................................................................................................................................................................................................................AGCGCCAAACGGGGTCGTCC................................................. 20 3 6 0.17 1 1 0 0 0 0
.........................................................................................................................................................................................................................AAGGGCCAGCAGGGGGC..................................................... 17 2 7 0.14 1 0 0 1 0 0
..........CTCAGGGAAGCCCCTCGCA.................................................................................................................................................................................................................................................................. 19 3 9 0.11 1 1 0 0 0 0
........................................................................................................................................................................................................................................................CGTCGTCGGTGGTGCTGAGGT.................. 21 3 20 0.10 2 0 2 0 0 0
..............GGGAAGTCCCTCGAGTT................................................................................................................................................................................................................................................................ 17 2 14 0.07 1 0 1 0 0 0
........................................................................................GGCTTCTTTTTTGGCAGGC.................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1
.......................................................................................................................TTGCATGCGATTCCTCAC...................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0
..............................................................................TTGCGCCTGCGGCTTC................................................................................................................................................................................................. 16 2 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:14506105-14506391 - dsi_16185 GTCTCGACGAGAATCCCTTCGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGGC---------GATAGAAGAGCG-TGGAG--AGAGAGCG------CGGAAGCCGAAG-AAAAAACCCATCGCACACAC-------------------------------ACGCACACGTACGC----------------------------------AAAGGAGG-GG----------TGTTGGTG---TG----------------------------------------------------------------------CGTGCCTGCG--------AGTG--------TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------GGT-T------TTC-----CCC-----------------------------CGCAGGACCCCGCCATCCAGCAGGCACGACG---ACTCCAAAGCGGCGCCGCCCTTGT
droSec2 scaffold_73:33306-33592 - GTCTCGACGAAAATCCCTTCGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGGC---------GATAGAAGAGCG-TGGAG--AGAGAGCG------CGGAAGCCGAAG-AAAAAACCCATCGCACACAC-------------------------------ACGCATACGTACGC----------------------------------AAAGGAGG-GG----------TGTTGGTG---TG----------------------------------------------------------------------CGTGCCTGCG--------AGTG--------TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------GGT-T------TTC-----GCC-----------------------------CGCAGGACCCCGCCATCCAGCAGGCACGACG---ACTCCAGAGCGGCGCCGCCCTTGT
dm3 chrX:15343492-15343787 - GTCTCGACGAGAATCCCTTCGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGGC---------GATAGAAGAGCT-AGGAG--AGAGAGCG------CGGAAGCCGAAG-AAAAAACCCATCGCACACAC-------------------------------ACGCACACGTACGC----------------------------------AAAGGTGG-GG----------TGTTGGTG---TG----------------------------------------------------------------------CGTGCCTGTGAGTGTA-------GTGTGTGTGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------GGT-T------TTC-----CCC-----------------------------CGCAGGACCCCGCCATCCAGCAGGCACGACG---ACTCCAGAGCGGCGCCGCCCTTGT
droEre2 scaffold_4690:11688982-11689270 + GTCTCGACGAGAATCCCTTCGGGGAGCCTAATCTGGACAATCCGTTTGCGGTAAGGC---------GATAAAAGAGCG-AGGAG--AGAGAGCG------CGGAAGCCGAAG-AAAAATCCCATCACACACAC-------------------------------ACGCACACGTACGC----------------------------------AACGGTGATGG----------TGCTTGTG---TA----------------------------------------------------------------------CGTGCCAGTG--------AGTG------TGTGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----C-------------TTC-----CC--------------------------------------GAT-T------T-C-----CCC-----------------------------CGCAGGACCCCGCCATCCAGCAGGCGCGGCG---ACTCCAGAGCGGCGCCGCCCTCGT
droYak3 X:9531709-9531995 - GTCTCGACGAGAATCCCTTCGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGGC---------GATAAAAGAGCG-TGGAG--AGACAGCG------CGGAAGCCGAAG-AAAAAACCCATCGCACATAC-------------------------------ACGCACACGTACGC----------------------------------AGTGGTGGGGG----------TGTATGTG---TG----------------------------------------------------------------------CGTGCCTGTG--------TGTG--------TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------GAC-T------T-C-----CTC-----------------------------CGCAGGACCCCGCCATCCAGCAGGCGCGGCG---ACTCCAGAGCGGCGCCGCCCTCGT
droEug1 scf7180000409533:492838-493121 - GTCTCGACGAGAATCCCTTCGGGGAGCCCAACCTGGACAATCCGTTTGCGGTAAGAT---------GATAAA-GTGCGGTGCGG--AGAGAGCG------CGGAAGCCGAAG-AAAAAAACTACCACAC--AC-------------------------------ACGTATACGTATGC----------------------------------AAGGGTGGG------------AGTATATG---TG----------------------------------------------------------------------CGTGTACGTGAGCATTTGTGTG--------TGTGTGCTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTT-----TC--------------------------------------TAT-T--------T-----CCT-----------------------------CGCAGGATCCCGCCATCCAGCAGGCAAGAAG---CTCACGGG------GCGCCCTCGT
droBia1 scf7180000299226:34710-34977 + GTCTCGACGAGAATCCCTTCGGGGAGCCCAACCTGGACAATCCGTTCGCGGTGAGGC---------GGCAGAAGAACG-GC----------------------GAGTGGAGC-AGAAAACCCAGCTCGCACAC-------------------------------GTACACACGCACGC-----CT-------------------------GCCAGGGTG-------------------------TG----------------------------------------------------------------------CGTGCGTGTG--------TGTG--------TGTGCGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAGTGAATTGGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------CGC-C------T-T-----CCC-----------------------------CGCAGGATCCCGCCATCCAGCAGGCACAGCAGGCCTTCCGGGGCGGCGCCGCGCTCGT
droTak1 scf7180000414432:104870-105156 - GTCTCGACGAGAATCCCTTCGGGGAGCCCAACCTGGACAATCCGTTTGCGGTGAGGC---------GATAATG--------GAG--AGAGAGC--------------GGCGA-AAAAAACCTAGCACACGTAC-------------------------------ACGTACACACAT--ATA----------------------TAT------AGAGAT--GTTAGCTGATGGGGGTAT-------GGGGGTG----------------------------------------------------------------------------------TATA--------TGTGTGCTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTCCAC--------TCCCCCGT------------------------CTGAT-T------T---------T-----------------------------TCCAGGATCCCGCCATCCAGCAGGCACAGCAGGCATTCCGGGGCGGCGCCGCGCTCGT
droEle1 scf7180000491023:1247740-1248015 + GTCTCGACGAGAATCCCTTCGGGGAGCCCAACCTGGACAATCCGTTTGCGGTGAGGC---------GACAAAAGAGC------------------------GGAAGCCGATGAAAAAAATCCAGCACACACAC-----------------------------------ACACGTACGC----------------------------------AAGGGTGGGGG----------TGTCCGTG---TG--------------------------------------------------CATATGCCT----ATGTGTGCGCGTGTGTG--------TGTG--------TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATCGGAA-----T-------------TTC-----------------------------------------------------------------TC-----------------------------CGCAGGATCCCGCCATCCAGCAGGCACGAAC---GTTTCGGGGCGGCGCCGCCCTCGT
droRho1 scf7180000777097:140988-141247 + GTCTCGACGAGAATCCCTTCGGGGAGCCCAACCTGGACAATCCGTTTGCGGTGAGGC---------GATAAAAGAGC------------------------GAAAGCCGAAG-AAAAAACTCAACACAC---------------------------------------ACACGTATGC----------------------------------AAGGGTGGG------------GGTGC-------GC----------GTGTGTG---------------------------------------------A------TGTGTTTGCG--------TGTG------TGTGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATCGGGA-----T-------------TTC-----------------------------------------------------------------TC-----------------------------CGCAGGATCCCGCCATCCAACAGGCACGGAC---GTTTCGGGGCGGCGCCGCCCTCGT
droFic1 scf7180000454038:586442-586697 - GTCTCGACGAGAATCCCTTCGGGGAGCCCAATCTGGATAATCCGTTTGCGGTAAGGC---------GATTAAAGAGC------------------------AGAAGCCGAAG-AAAAAACCCATCGCACACAT-----------------------------------ACACGTATGC----------------------------------AGGGGTTTGGG----------GGTAT-------GCGCATG----------------------------------------------------------------------------------TGTG--------TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGCGCGAATTGATTTCTGATTGGGA-----C-------------TCT-----C-------------------------------------------------------ACAACC-----------------------------GGCAGGATCCCGCCATCCAACAGGCACGACG---CCTTCAGAGCGGCGCCGCGCTCGT
droKik1 scf7180000302698:1092511-1092800 - GTCTCGACGAGAATCCCTTTGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGAGCA--------GCAAAAC----------ACA-----------------CACAGAGA-AGAAAACCCGACACACGCAC-------------------------------ACACTCACA--CACAGA--------------------TACACGTAGGCCAGAGTGGG------------CGTTCGTG---TGCGTATGTGTGTGT------GTGTTGA--TG-----------------------------------------------------------------------------TGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAACTTATTG-----------GGGAAATATTTTTGCAAACCGCTTCCGC--------TTCCTC------------------------------TTT------G-------TAT-----------------------------TTCAGGACCCCGCCATCCAGCAGGCAAGACG---TTTGCAAAGCGG---CGCCCTCGT
droAna3 scaffold_13117:1546998-1547305 - GACTCGACGAGAATCCCTTTGGGGAGCCCAACTGGGACAATCCTTTTGCGGTAAGCAG-------------------------------------------GGAATTGGTGA-AAAAAGCCCAGCTCACACAC-------------------------------AC--------AGGC----------------------------------CAGAGTGGG------------CGTTCGTT-------CGTGTGTGTGT------GTGTTGGTTAGTGGGTGCAACGACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------TCGTC----A-CATATGCTGACTGATTTCGCGACTGATTGGGG-----C-------------TCCTATTGCCGTTCTTCCCCCTCTAATGTATTCTTCTAC---GCATATTC--T--------A-----TTCTATTCTATTC---------------TATTCACAGGATCCAGCCATCCAGCAGGCTCAGCG---GC---TGGCCGGCGGAGCAGTCGT
droBip1 scf7180000396425:569530-569823 + GACTCGACGATAATCCATTTGGGGAGCCCAATTGGGAGAATCCTTTTGCGGTAAGCAG--------------------------------------------GGAGCTTGTG-AAAAAGCCCAGCTCACACAC-------------------------------AC--------AGGC----------------------------------CAGAGTGGG------------CGTGCATT-----TGTGTGTGTGTGT------GTGCTGGTAAGTGGGTGCAACGACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------TCGTC----A-CATATGCTGACTGATTTCGCTGC-GATTGGGT-----T-------------TCCTTCTGCCATTGTCGCCCCTCTAATGCATTTTTCTAC---GCGTATAC--T--------T-----TTC-----------------------------TACAGGATCCAGCTATCCAGCAGGCACAGCG---TC---TGGCCGGCGGAGCAGTCGT
dp5 XL_group1e:12284926-12285181 - GTCTTGATGAAAATCCCTTTGGCGAGCCCAATCTGGACAATCCGTTTGCGGTAAGTCCG-------------------------------------------------GAAT-GAAAAATCCAACCGACACACACGC---------------------------ACCCACACAAACACAGTCACAAACA-----------------------CAGAGTGAGTG----------AGTTCATGGAT-GCGTGGGTGTGTGA------GTGC-----------TGCAACGACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------CCGTC----G-CATATGTTTAAT-------TTTCCTA---------------------------------------------------------------------------TGT------GTCCTATAACC-----------------------------CGTAGGATCCCGCCATACAGCAGGCAAGACG------TCAGGCTGGCGCTGCCTTGGT
droPer2 scaffold_14:1321849-1322104 + GTCTTGATGAAAATCCCTTTGGCGAGCCCAATCTGGACAATCCGTTTGCGGTAAGTCCG-------------------------------------------------GAAT-GAAAATTCCAACCGACACACACGC---------------------------ACCCACACAAACACAGTCACAATCA-----------------------CAGAGTGAGTG----------AGTTCATGCAT-GCGTGGGTGTGTGA------GTGC-----------TGCAACGACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------CCGTC----G-CATATGTTTAAT-------TTTCTTATA---------T-------------GTC-----C-------------------------------------------T-----------ATAACC-----------------------------CGTAGGATCCCGCCATACAGCAGGCAAGACG------TCAGGCTGGCGCTGCCTTGGT
droWil2 scf2_1100000004515:1639036-1639331 + GTTTTGATGAGAATCCATTTGGTGAGCCCAATCTGGACAATCCTTTTGCGGTAAGGCTGCTCTCTTTACAAAA------------------------------------AAG-AAAAAACCCA-CACACACACACACATATAAACGCCGCCCGCCCCCATACACCAACACACACACACACC---T---A----TATATAAGCATACCTATGC---ATACAGTC----------AGCTTTTGCAT-ATGTTGATG------------------------------------------------------------------------------------------------------TT-----------------------------------------------------------------------------------TTTTTTTCC----A-CACTCTTTGATTG----------------TTT-----T-------------T--------------------------------------CTTGCATTTGT--T--------T-----TTT-----------------------------TTTAGGACCCTGCTATACAGCAAGCACGAAGGAACAATCAATCTGGCGCCGCCCAGGT
droVir3 scaffold_12928:7381178-7381503 - dvi_9257 GTTTCGATGAAAATCCATTTGGTGAGCCCAATCTGGATAATCCATTTGCGGTAAGCCCG--------ACAACAA----------AAA--------------TTCTGCTGATG-AAA--ACCACACACACACAC-----------------------------------ACACACACGCAGA--------------------TATTTGT----AAACGTA----------------TATGTG---TA----T------GTGTGTGAT--------TGTAGGTGCAACGACGGCAACTCATATCCAA----ATATA--TGTGTCTGTG--------TGTG------TGTGTGTGC-----------------------CGCCTACGCTTTGCT---------------CA-CATTTTTCT------------------TTTATGCATTTATTTATTTTATTATATTATATATATTTTTTTTTGTTGGTGA-----T-------------T----------------------------------------------------------------------------------------------------TAGGATCCCGCCATACAGCAGGCGACGCG---CA---TGT------CCACCAATGT
droMoj3 scaffold_6473:2674240-2674590 + GTTTTGATGAAAATCCATTTGGCGAGCCCAATCTGGATAACCCATTTGCGGTAAGCCTG--------ACAACAA----------AAA---TGC-TGTGCACGAAA-------------ACCACACACACACAC-------------------------------AGGCACACATAT--TTG--------------------------T----ATACGT-------------------------------------GTGT----------------GTAGGTGCAACGACGACAGCTCATAGGCCAATGTCTATGT----GTGGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTA-------TGTGACTGTGTTCCGCCTACGCTGTGCT---------------CAGCA-GTTGCTTTGATGTGTATGTTTTACGTT--ACTTGATTT----A-CATATTT-------ATTTTTTTTTT-----------------------------------------------------------------TTTGCATTTGA--T--------T-----GAT-----------------------------TTTAGGATCCCGCCATACAGCAGGCAACACG---CAT---GT------CCACCAATGT
droGri2 scaffold_15081:3325462-3325862 + GTTTCGATGAAAATCCATTTGGCGAGCCCAATCTGGATAATCCATTTGCGGTAAGGCTG--------ACAACAA----------AAAATTTCTG------CTGCTGCTGATG-AAA--ACCCCACACACACGC-------------------------------ACACACACACACACACACACTACCAGTCA--------TATA------------TATA------------TATGCATT-----TGTGTGAGTGTGT------GTG------CGTAGGTGCAACGACGACATCACGTATGCAC----ATATGT----GTGCGTGTGTCTCTGTGTG--------TGTGTGTTGTGTGTTTGT--GTATGTGTGCCGCCTACGATTTGATTAACGTGTGCTTTACAA-CATTTTCCC------------------TT------------------------T-------ATTTTTTTCTGT-----A-----T-------------TGT------------------------------------TTTTCATTTGT--GTCGTTTGTC-----GCC----------TGTCGCTTGTCGCTTGGTGTTCAGGATCCCGCCATACAGCAGGCGACACG---AATGTCGAC---------AAATGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTCTCGACGAGAATCCCTTCGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGGC---------GATAGAAGAGCG-TGGAG--AGAGAGCG------CGGAAGCCGAAG-AAAAAACCCATCGCACACAC-------------------------------ACGCACACGTACGC----------------------------------AAAGGAGG-GG----------TGTTGGTG---TG----------------------------------------------------------------------CGTGCCTGCG--------AGTG--------TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------GGT-T------TTC-----CCC-----------------------------CGCAGGACCCCGCCATCCAGCAGGCACGACG---ACTCCAAAGCGGCGCCGCCCTTGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................TCGGGGAGCCCAATCTGGACAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
..................................GGACAATCCGTTTGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..................TCGGGGAGCCCAATCTGGACAATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTC----A-CATATGTTGAATG...................................................................................................................................................................................................1811.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCACGACG---ACTCCAAAGCGGCGCC........2711.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------------------------------GGT-T------TTC-----CCC-----------------------------CGCAGGACCCCG..............................................2311.00110000000000000000
...........................CCAATCTGGACAATCCGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
................CTTCGGGGAGCCCAATCTGGACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCGGCGCCGCCCTTGG1911.00100000000001000000
.............................................................................G-TGGAG--AGAGAGCG------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000001000000
..............CCCTTCGGGGAGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15160.13200000020000000000
droSec2
GTCTCGACGAAAATCCCTTCGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGGC---------GATAGAAGAGCG-TGGAG--AGAGAGCG------CGGAAGCCGAAG-AAAAAACCCATCGCACACAC-------------------------------ACGCATACGTACGC----------------------------------AAAGGAGG-GG----------TGTTGGTG---TG----------------------------------------------------------------------CGTGCCTGCG--------AGTG--------TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------GGT-T------TTC-----GCC-----------------------------CGCAGGACCCCGCCATCCAGCAGGCACGACG---ACTCCAGAGCGGCGCCGCCCTTGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................CCAATCTGGACAATCCGTTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGCACGACG---ACTCCA..................1911.0010010
..............CCCTTCGGGGAGCCCAATCTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
................................................................................................................................................................................................................................................G---TG----------------------------------------------------------------------CGTGCCTGCG--------AGTG--------TGTG..........................................................................................................................................................................................................................................................................................................................2111.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGCACGACG---ACTCCAG.................2011.0010001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGACG---ACTCCAGAGCG.............1911.0010010
...........................................................................................................CGAAG-AAAAAACCCATCGCACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACG---ACTCCAGAGCGGCGCCGCC.....2511.0010100
............ATCCCTTCGGGGAGCCCAATCTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
dm3
GTCTCGACGAGAATCCCTTCGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGGC---------GATAGAAGAGCT-AGGAG--AGAGAGCG------CGGAAGCCGAAG-AAAAAACCCATCGCACACAC-------------------------------ACGCACACGTACGC----------------------------------AAAGGTGG-GG----------TGTTGGTG---TG----------------------------------------------------------------------CGTGCCTGTGAGTGTA-------GTGTGTGTGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------GGT-T------TTC-----CCC-----------------------------CGCAGGACCCCGCCATCCAGCAGGCACGACG---ACTCCAGAGCGGCGCCGCCCTTGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................GCCTGTGAGTGTA-------GTGTG................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100101000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGACG---ACTCCAGAGCGGC...........2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000
..................................................................................................................................................................................................................................................................................................................................TGTGAGTGTA-------GTGTGTGTGTGTG........................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCACGACG---ACTCCAGAGCGG............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGACG---ACTCCAGAGCGGCG..........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................................................................................................................................................................................................................................................................................................................GAGTGTA-------GTGTGTGTGTG..........................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010000000000
........................................................................................................................................................................................................................................................................................................................................TGTA-------GTGTGTGTGTGTGTT......................................................................................................................................................................................................................................................................................................................1921.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000002000000000
.....................................................................................................................................................................................................................AAGGTGG-GG----------TGTTGGTG---TG----------------------------------------------------------------------C...........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................CGCACACGTACGC----------------------------------AAAGGTGG-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GTGCCTGTGAGTGTA-------GTGTGT...............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCACGACG---ACTCCAGAGCGGCGCC........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTGGTTTCTGATTGGGA-----...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................TG----------------------------------------------------------------------CGTGCCTGTGAGTGTA-------GTG..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................GATAGAAGAGCT-AGGAG--AGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCAGGCACGACG---ACTCCAGAGCGG............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CA..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................ACAC-------------------------------ACGCACACGTACGC----------------------------------AAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------GGT-.........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGGTTTCTGATTGGGA-----...........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTCTGATTGGGA-----T-------------TTC-----C....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
........................................................................AGAGCT-AGGAG--AGAGAGCG------CGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGAGAATCCCTTCGGGGAGCCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACG---ACTCCAGAGCGGCG..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GATAGAAGAGCT-AGGAG--AGAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTTGAATGAATTGGTTTCTG.......................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................AAGGTGG-GG----------TGTTGGTG---TG----------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACG---ACTCCAGAGCGGCGCCGCCC....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GTA-------GTGTGTGTGTGTGTTGG....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTTCGGGGAGCCCAATCTGGACAATCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GTTGGTG---TG----------------------------------------------------------------------CGTGCCTGTGAG................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................GCACACGTACGC----------------------------------AAAGGTGG-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................CCCAATCTGGACAATCCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...TCGACGAGAATCCCTTCGGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................AATCCGTTTGCGGTGAGGC---------GA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................G----------TGTTGGTG---TG----------------------------------------------------------------------CGTGCCTG....................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............CCCTTCGGGGAGCCCAATCTGGACAATCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TG---TG----------------------------------------------------------------------CGTGCCTGTGAGTG..............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CGTGCCTGTGAGTGTA-------GTGTGTT..............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGACG---ACTCCAGAGC..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCAGAGCGGCGCCGCCCTT..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG---ACTCCAGAGCGGCGCCG.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AGTGTA-------GTGTGTGTGTGTGT.......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGCACGACG---ACTCCAGAGCGGCG..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................CGTACGC----------------------------------AAAGGTGG-GG----------TGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................GAGCT-AGGAG--AGAGAGCG------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................AAACCCATCGCACACAC-------------------------------ACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...................................................................ATAGAAGAGCT-AGGAG--AGAGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGACG---ACTCCAGAGC..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................G---TG----------------------------------------------------------------------CGTGCCTGTGAGTGTA-------GTGT.................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................GAGTGTA-------GTGTGTGTGTGTGTTGGGT-----------------------------------------------------------------------------------GC.............................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................C-------------------------------ACGCACACGTACGC----------------------------------AAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TTGCGGTGAGGC---------GATAGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CAATCTGGACAATCCGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACG---ACTCCAGAGCGGCGCC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGACG---ACTCCAGAGCGGCGCCGCCCTATC3111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATCCCTTCGGGGAGCCCAATCTGGACAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCATCCAGCAGGCACGACG---ACT.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CACACGTACGC----------------------------------AAAGGTGG-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATCCGTTTGCGGTGAGGC---------GATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GAG--AGAGAGCG------CGGAAGCCGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACG---ACTCCAGAGCGGCGCCG.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAGGCACGACG---ACTCCAGAGCGGC...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGCAGGCACGACG---ACTCCAGAGCGG............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GTGCCTGTGAGTGTA-------GTGTG................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACG---ACTCCAGAGCGGCGCCGC......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GTACGC----------------------------------AAAGGTGG-GG----------TGT............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TTC-----CCC-----------------------------CGCAGGACCCC...............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGACG---ACTCCAGAGCGGC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACG---ACTCCAGAGCGGCGC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACG---ACTCCAGAGCGGCGC.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................TTGGTG---TG----------------------------------------------------------------------CGTGCCTGTGAGTG..............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..........................................................................................................................................................................ACGTACGC----------------------------------AAAGGTGG-GG----------TG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................CG------CGGAAGCCGAAG-AAAAAACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG---ACTCCAGAGCGGCGCCGCC.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TACGC----------------------------------AAAGGTGG-GG----------TGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................................................................................................................................................................................................................................................................................................GTGCCTGTGAGTGTA-------GTGTGTG..............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........AATCCCTTCGGGGAGCCCAATCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGACG---ACTCCAGAGCGG............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAATTGGTTTCTGATTGGGA-----T-------------TTC-----C....................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................CCCATCGCACACAC-------------------------------ACGCACACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...TCGACGAGAATCCCTTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CGTGCCTGTGAGTGTA-------GTGTGT...............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGACG---ACTCCAGAGCGGCGC.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG---ACTCCAGAGCGGCGCCTT......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CGTGCCTGTGAGTGTA-------GTGTG................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGAGCGGCGCCGCCCTT..2111.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACG---ACTCCAGAGCGGCGCCGCCCTT..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACG---ACTCCAGAGCGGCGCCGCC.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TACGC----------------------------------AAAGGTGG-GG----------TGTTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AGAAGAGCT-AGGAG--AGAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGCACGACG---ACTCCAGAG...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GAGTGTA-------GTGTGTGTGTGTGT.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................................................................................................................................................A-------GTGTGTGTGTGTGTTGGGT-----------------------------------------------------------------------------------GCA............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................TCTGGACAATCCGTTTGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGCACGACG---ACTCCAGAGCG.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................C---------GATAGAAGAGCT-AGGAG--AGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............CCTTCGGGGAGCCCAATCTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------GGT-T------TTC-----CCC-----------------------------CGC.......................................................3411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GGTGG-GG----------TGTTGGTG---TG----------------------------------------------------------------------CGTGCCT.....................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACG---ACTCCAGAGCGGCGCCGC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AGAAGAGCT-AGGAG--AGAGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGCACGACG---ACTCCAGAGCGGCGCCG.......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---ACTCCAGAGCGGCGCCGCCCTT..2311.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCAGAGCGGCGCCGCC.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TGTTGGTG---TG----------------------------------------------------------------------CGTGCCTGTGAG................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................TGTA-------GTGTGTGTGTGTGTTGG....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCACGACG---ACTCCAGAGCGGCGC.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CA..............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.....GACGAGAATCCCTTCGGGGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTTGGGT-----------------------------------------------------------------------------------GCA............................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTTCGGGGAGCCCAATCTTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.....................................................................AGAAGAGCT-AGGAG--AGACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTCTCGACGAGAATCCCTTCGGGGAGCCTAATCTGGACAATCCGTTTGCGGTAAGGC---------GATAAAAGAGCG-AGGAG--AGAGAGCG------CGGAAGCCGAAG-AAAAATCCCATCACACACAC-------------------------------ACGCACACGTACGC----------------------------------AACGGTGATGG----------TGCTTGTG---TA----------------------------------------------------------------------CGTGCCAGTG--------AGTG------TGTGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----C-------------TTC-----CC--------------------------------------GAT-T------T-C-----CCC-----------------------------CGCAGGACCCCGCCATCCAGCAGGCGCGGCG---ACTCCAGAGCGGCGCCGCCCTCGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............ATCCCTTCGGGGAGCCTAATCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.........................GCCTAATCTGGACAATCCGTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGGCGCGGCG---ACTCCAGAGC..............2411.0011000000
.....................................................................................................................................................................................................................................................................................................................................G--------AGTG------TGTGTGTGTTGGG...................................................................................................................................................................................................................................................................................................................1811.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAATTGGTTTCTGATTGGGA-----C-------------.............................................................................................................................................................2511.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCAGCAGGCGCGGCG---ACTCC...................2311.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGCGGCG---ACTCCAGAGCGGC...........2411.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCG---ACTCCAGAGCGGCGC.........2111.0011000000
..............CCCTTCGGGGAGCCTAATCTGGACAATCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCG---ACTCCAGAGCGGCGC.........1911.0010000100
.............................................................................................................................................................................................................................................................................................................................GTGCCAGTG--------AGTG------TGTGTGTG........................................................................................................................................................................................................................................................................................................................2120.5011000000
droYak3
GTCTCGACGAGAATCCCTTCGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGGC---------GATAAAAGAGCG-TGGAG--AGACAGCG------CGGAAGCCGAAG-AAAAAACCCATCGCACATAC-------------------------------ACGCACACGTACGC----------------------------------AGTGGTGGGGG----------TGTATGTG---TG----------------------------------------------------------------------CGTGCCTGTG--------TGTG--------TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------GAC-T------T-C-----CTC-----------------------------CGCAGGACCCCGCCATCCAGCAGGCGCGGCG---ACTCCAGAGCGGCGCCGCCCTCGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............ATCCCTTCGGGGAGCCCAATCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCGCCATCCAGCAGGCGCGGCG---ACT.....................2711.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATGTTGAATGAATTGGT............................................................................................................................................................................................2011.00100001000000
..................................................................GATAAAAGAGCG-TGGAG--AGACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
........................................................................AGAGCG-TGGAG--AGACAGCG------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGCAGGCGCGGCG---ACTC....................2111.00101000000000
........GAGAATCCCTTCGGGGAGCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.....................................CAATCCGTTTGCGGTGAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
droEug1
GTCTCGACGAGAATCCCTTCGGGGAGCCCAACCTGGACAATCCGTTTGCGGTAAGAT---------GATAAA-GTGCGGTGCGG--AGAGAGCG------CGGAAGCCGAAG-AAAAAAACTACCACAC--AC-------------------------------ACGTATACGTATGC----------------------------------AAGGGTGGG------------AGTATATG---TG----------------------------------------------------------------------CGTGTACGTGAGCATTTGTGTG--------TGTGTGCTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTT-----TC--------------------------------------TAT-T--------T-----CCT-----------------------------CGCAGGATCCCGCCATCCAGCAGGCAAGAAG---CTCACGGG------GCGCCCTCGTSizeHit CountTotal NormTotal
No Reads
droBia1
GTCTCGACGAGAATCCCTTCGGGGAGCCCAACCTGGACAATCCGTTCGCGGTGAGGC---------GGCAGAAGAACG-GC----------------------GAGTGGAGC-AGAAAACCCAGCTCGCACAC-------------------------------GTACACACGCACGC-----CT-------------------------GCCAGGGTG-------------------------TG----------------------------------------------------------------------CGTGCGTGTG--------TGTG--------TGTGCGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAGTGAATTGGTTTCTGATTGGGA-----T-------------TTC-----CC--------------------------------------CGC-C------T-T-----CCC-----------------------------CGCAGGATCCCGCCATCCAGCAGGCACAGCAGGCCTTCCGGGGCGGCGCCGCGCTCGTSizeHit CountTotal NormTotal
No Reads
droTak1
GTCTCGACGAGAATCCCTTCGGGGAGCCCAACCTGGACAATCCGTTTGCGGTGAGGC---------GATAATG--------GAG--AGAGAGC--------------GGCGA-AAAAAACCTAGCACACGTAC-------------------------------ACGTACACACAT--ATA----------------------TAT------AGAGAT--GTTAGCTGATGGGGGTAT-------GGGGGTG----------------------------------------------------------------------------------TATA--------TGTGTGCTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATTGGGA-----T-------------TTCCAC--------TCCCCCGT------------------------CTGAT-T------T---------T-----------------------------TCCAGGATCCCGCCATCCAGCAGGCACAGCAGGCATTCCGGGGCGGCGCCGCGCTCGTSizeHit CountTotal NormTotal
No Reads
droEle1
GTCTCGACGAGAATCCCTTCGGGGAGCCCAACCTGGACAATCCGTTTGCGGTGAGGC---------GACAAAAGAGC------------------------GGAAGCCGATGAAAAAAATCCAGCACACACAC-----------------------------------ACACGTACGC----------------------------------AAGGGTGGGGG----------TGTCCGTG---TG--------------------------------------------------CATATGCCT----ATGTGTGCGCGTGTGTG--------TGTG--------TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATCGGAA-----T-------------TTC-----------------------------------------------------------------TC-----------------------------CGCAGGATCCCGCCATCCAGCAGGCACGAAC---GTTTCGGGGCGGCGCCGCCCTCGTSizeHit CountTotal NormTotal
No Reads
droRho1
GTCTCGACGAGAATCCCTTCGGGGAGCCCAACCTGGACAATCCGTTTGCGGTGAGGC---------GATAAAAGAGC------------------------GAAAGCCGAAG-AAAAAACTCAACACAC---------------------------------------ACACGTATGC----------------------------------AAGGGTGGG------------GGTGC-------GC----------GTGTGTG---------------------------------------------A------TGTGTTTGCG--------TGTG------TGTGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAATGAATTGGTTTCTGATCGGGA-----T-------------TTC-----------------------------------------------------------------TC-----------------------------CGCAGGATCCCGCCATCCAACAGGCACGGAC---GTTTCGGGGCGGCGCCGCCCTCGTSizeHit CountTotal NormTotal
No Reads
droFic1
GTCTCGACGAGAATCCCTTCGGGGAGCCCAATCTGGATAATCCGTTTGCGGTAAGGC---------GATTAAAGAGC------------------------AGAAGCCGAAG-AAAAAACCCATCGCACACAT-----------------------------------ACACGTATGC----------------------------------AGGGGTTTGGG----------GGTAT-------GCGCATG----------------------------------------------------------------------------------TGTG--------TGTGTGTTGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGCGCGAATTGATTTCTGATTGGGA-----C-------------TCT-----C-------------------------------------------------------ACAACC-----------------------------GGCAGGATCCCGCCATCCAACAGGCACGACG---CCTTCAGAGCGGCGCCGCGCTCGTSizeHit CountTotal NormTotal
No Reads
droKik1
GTCTCGACGAGAATCCCTTTGGGGAGCCCAATCTGGACAATCCGTTTGCGGTGAGAGCA--------GCAAAAC----------ACA-----------------CACAGAGA-AGAAAACCCGACACACGCAC-------------------------------ACACTCACA--CACAGA--------------------TACACGTAGGCCAGAGTGGG------------CGTTCGTG---TGCGTATGTGTGTGT------GTGTTGA--TG-----------------------------------------------------------------------------TGGGT-----------------------------------------------------------------------------------GCATTCGTC----A-CATATGTTGAACTTATTG-----------GGGAAATATTTTTGCAAACCGCTTCCGC--------TTCCTC------------------------------TTT------G-------TAT-----------------------------TTCAGGACCCCGCCATCCAGCAGGCAAGACG---TTTGCAAAGCGG---CGCCCTCGTSizeHit CountTotal NormTotal
No Reads
droAna3
GACTCGACGAGAATCCCTTTGGGGAGCCCAACTGGGACAATCCTTTTGCGGTAAGCAG-------------------------------------------GGAATTGGTGA-AAAAAGCCCAGCTCACACAC-------------------------------AC--------AGGC----------------------------------CAGAGTGGG------------CGTTCGTT-------CGTGTGTGTGT------GTGTTGGTTAGTGGGTGCAACGACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------TCGTC----A-CATATGCTGACTGATTTCGCGACTGATTGGGG-----C-------------TCCTATTGCCGTTCTTCCCCCTCTAATGTATTCTTCTAC---GCATATTC--T--------A-----TTCTATTCTATTC---------------TATTCACAGGATCCAGCCATCCAGCAGGCTCAGCG---GC---TGGCCGGCGGAGCAGTCGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCAGCAGGCTCAGCG---GC---TGGCC..............2511.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCG---GC---TGGCCGGCGGAGCAGTCGT2811.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGCG---GC---TGGCCGGCG..........1911.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCG---GC---TGGCCGGCGGAG.......2011.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCATCCAGCAGGCTCAGCG---GC---T..................2411.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGCCGTTCTTCCCCCTCT.....................................................................................................................................2111.001100000
droBip1
GACTCGACGATAATCCATTTGGGGAGCCCAATTGGGAGAATCCTTTTGCGGTAAGCAG--------------------------------------------GGAGCTTGTG-AAAAAGCCCAGCTCACACAC-------------------------------AC--------AGGC----------------------------------CAGAGTGGG------------CGTGCATT-----TGTGTGTGTGTGT------GTGCTGGTAAGTGGGTGCAACGACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------TCGTC----A-CATATGCTGACTGATTTCGCTGC-GATTGGGT-----T-------------TCCTTCTGCCATTGTCGCCCCTCTAATGCATTTTTCTAC---GCGTATAC--T--------T-----TTC-----------------------------TACAGGATCCAGCTATCCAGCAGGCACAGCG---TC---TGGCCGGCGGAGCAGTCGTSizeHit CountTotal NormTotal
No Reads
dp5
GTCTTGATGAAAATCCCTTTGGCGAGCCCAATCTGGACAATCCGTTTGCGGTAAGTCCG-------------------------------------------------GAAT-GAAAAATCCAACCGACACACACGC---------------------------ACCCACACAAACACAGTCACAAACA-----------------------CAGAGTGAGTG----------AGTTCATGGAT-GCGTGGGTGTGTGA------GTGC-----------TGCAACGACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------CCGTC----G-CATATGTTTAAT-------TTTCCTA---------------------------------------------------------------------------TGT------GTCCTATAACC-----------------------------CGTAGGATCCCGCCATACAGCAGGCAAGACG------TCAGGCTGGCGCTGCCTTGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGACG------TCAGGCTGGC...........1912.0020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCAGGCAAGACG------TC...................1912.0020200000000
..........................................................................................................................................................................................ACA-----------------------CAGAGTGAGTG----------AGTTCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATACAGCAGGCAAGACG------TC...................2211.0010100000000
..............................ATCTGGACAATCCGTTTGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..CTTGATGAAAATCCCTTTGGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCAGGCAAGACG------TCAGGCTG.............2411.0010100000000
..........AAATCCCTTTGGCGAGCCCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGACG------TCAGGCTGGCGCT........2211.0010100000000
.......................GAGCCCAATCTGGACAATCCGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------TCAGGCTGGCGCTGCCTTGGT2211.0010100000000
............ATCCCTTTGGCGAGCCCAATCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGCAAGACG------TCAGGCTGGCGCTG.......2611.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCAGGCAAGACG------TCAGGCTGGC...........2711.0010010000000
droPer2
GTCTTGATGAAAATCCCTTTGGCGAGCCCAATCTGGACAATCCGTTTGCGGTAAGTCCG-------------------------------------------------GAAT-GAAAATTCCAACCGACACACACGC---------------------------ACCCACACAAACACAGTCACAATCA-----------------------CAGAGTGAGTG----------AGTTCATGCAT-GCGTGGGTGTGTGA------GTGC-----------TGCAACGACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------CCGTC----G-CATATGTTTAAT-------TTTCTTATA---------T-------------GTC-----C-------------------------------------------T-----------ATAACC-----------------------------CGTAGGATCCCGCCATACAGCAGGCAAGACG------TCAGGCTGGCGCTGCCTTGGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGACG------TCAGGCTGGC...........1911.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACAGCAGGCAAGACG------TCAGGCTGGC...........2811.001100000
..............CCCTTTGGCGAGCCCAATCTGGACAATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAAGACG------TCAGGCTGGCGCT........2311.001100000
droWil2
GTTTTGATGAGAATCCATTTGGTGAGCCCAATCTGGACAATCCTTTTGCGGTAAGGCTGCTCTCTTTACAAAA------------------------------------AAG-AAAAAACCCA-CACACACACACACATATAAACGCCGCCCGCCCCCATACACCAACACACACACACACC---T---A----TATATAAGCATACCTATGC---ATACAGTC----------AGCTTTTGCAT-ATGTTGATG------------------------------------------------------------------------------------------------------TT-----------------------------------------------------------------------------------TTTTTTTCC----A-CACTCTTTGATTG----------------TTT-----T-------------T--------------------------------------CTTGCATTTGT--T--------T-----TTT-----------------------------TTTAGGACCCTGCTATACAGCAAGCACGAAGGAACAATCAATCTGGCGCCGCCCAGGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................TTGGTGAGCCCAATCTGGACAATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCACGAAGGAACAATCAATCTGGC...........2611.00100100
................................CTGGACAATCCTTTTGCGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.TTTTGATGAGAATCCATTTGGTGAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
droVir3
GTTTCGATGAAAATCCATTTGGTGAGCCCAATCTGGATAATCCATTTGCGGTAAGCCCG--------ACAACAA----------AAA--------------TTCTGCTGATG-AAA--ACCACACACACACAC-----------------------------------ACACACACGCAGA--------------------TATTTGT----AAACGTA----------------TATGTG---TA----T------GTGTGTGAT--------TGTAGGTGCAACGACGGCAACTCATATCCAA----ATATA--TGTGTCTGTG--------TGTG------TGTGTGTGC-----------------------CGCCTACGCTTTGCT---------------CA-CATTTTTCT------------------TTTATGCATTTATTTATTTTATTATATTATATATATTTTTTTTTGTTGGTGA-----T-------------T----------------------------------------------------------------------------------------------------TAGGATCCCGCCATACAGCAGGCGACGCG---CA---TGT------CCACCAATGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................ATTTGGTGAGCCCAATCTGGATAATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGCCATACAGCAGGCGACGCG---C.......................2411.001000100000000000000000000000000000000000000000000000000000000000
..................TTGGTGAGCCCAATCTGGATAATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
...................TGGTGAGCCCAATCTGGATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................TTTGGTGAGCCCAATCTGGATAATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000010000000000000000000000000000000000000000000000000000000
.....GATGAAAATCCATTTGGTGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
............ATCCATTTGGTGAGCCCAATCTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
........GAAAATCCATTTGGTGAGCCCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
GTTTCGATGAAAATCCATTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTTGGTGA-----T-------------T----------------------------------------------------------------------------------------------------T.......................................................1611.001000000000000000000000000000000000000000000000000010000000000000
..................TTGGTGAGCCCAATCTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000100000000000000000000000
...............CATTTGGTGAGCCCAATCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
....CGATGAAAATCCATTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
GTTTTGATGAAAATCCATTTGGCGAGCCCAATCTGGATAACCCATTTGCGGTAAGCCTG--------ACAACAA----------AAA---TGC-TGTGCACGAAA-------------ACCACACACACACAC-------------------------------AGGCACACATAT--TTG--------------------------T----ATACGT-------------------------------------GTGT----------------GTAGGTGCAACGACGACAGCTCATAGGCCAATGTCTATGT----GTGGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTA-------TGTGACTGTGTTCCGCCTACGCTGTGCT---------------CAGCA-GTTGCTTTGATGTGTATGTTTTACGTT--ACTTGATTT----A-CATATTT-------ATTTTTTTTTT-----------------------------------------------------------------TTTGCATTTGA--T--------T-----GAT-----------------------------TTTAGGATCCCGCCATACAGCAGGCAACACG---CAT---GT------CCACCAATGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................CCAATGTCTATGT----GTGGTTGT.................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCAGGCAACACG---CAT---GT------C.........2211.001000001
GTTTTGATGAAAATCCATTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
GTTTCGATGAAAATCCATTTGGCGAGCCCAATCTGGATAATCCATTTGCGGTAAGGCTG--------ACAACAA----------AAAATTTCTG------CTGCTGCTGATG-AAA--ACCCCACACACACGC-------------------------------ACACACACACACACACACACTACCAGTCA--------TATA------------TATA------------TATGCATT-----TGTGTGAGTGTGT------GTG------CGTAGGTGCAACGACGACATCACGTATGCAC----ATATGT----GTGCGTGTGTCTCTGTGTG--------TGTGTGTTGTGTGTTTGT--GTATGTGTGCCGCCTACGATTTGATTAACGTGTGCTTTACAA-CATTTTCCC------------------TT------------------------T-------ATTTTTTTCTGT-----A-----T-------------TGT------------------------------------TTTTCATTTGT--GTCGTTTGTC-----GCC----------TGTCGCTTGTCGCTTGGTGTTCAGGATCCCGCCATACAGCAGGCGACACG---AATGTCGAC---------AAATGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........GAAAATCCATTTGGCGAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----A-----T-------------TGT------------------------------------TTTTCATTTGT--GTCG.....................................................................................................2111.00101

Generated: 05/18/2015 at 12:57 PM