ID:

dsi_16175

Coordinate:

3l:14413847-14413996 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.2 -22.2 -22.2

Flybase annnotation

exon [3l_14413682_14416624_-]; CDS [3l_14413682_14416624_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
AACCTTTGCCATATCCACAGCAGTATACTGATCCCAATGCAGCTCCAGCCCCAGCTCCTGGTGTTTCTTCGGTACCAAGTCCTGCTCCAGCTCAGACTCCAGCCCCCACTTCATCTCAAGCTCAGGTTCCCACATCTCCTCATCCTTCAGCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGCTTTAATCCGCAGACAGGTATATACGAGTACAGCAGTGGCTACCAGCAGGACACCAGTTCGTT
**************************************************...(((...((((.......(((....((((..((....))...))))...)))...............(((.(((.................)))..)))))))...)))((((((.(((.......)))..))))))...........**************************************************
Read size # Mismatch Hit Count Total Norm Total M025
embryo
SRR553486
Makindu_3 day-old ovaries
SRR618934
dsim w501 ovaries
M023
head
SRR553485
Chicharo_3 day-old ovaries
SRR553487
NRT_0-2 hours eggs
M024
male body
..................................................................................TGCTCCAGCTCAGACTCCAGCCCC................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................AGCTTTGATCCGCAGA................................................. 16 1 2 0.50 1 0 1 0 0 0 0 0
............ATCCACAGCGGTATACTC............................................................................................................................................................................................................................ 18 2 4 0.25 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................AGCTTTGATCCGCAG.................................................. 15 1 9 0.22 2 0 0 0 0 1 1 0
......................................................................................................................................................................................TAGAGCTTTGATCCGGAG.................................................. 18 3 20 0.15 3 0 0 0 3 0 0 0
.......................................................................................................................................................................................................GACAGGTAAATACGA.................................... 15 1 11 0.09 1 0 1 0 0 0 0 0
........................................................................................................................................................................................AAGCTTTGATCCGCAGA................................................. 17 2 17 0.06 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................GGCAAGACGCCAGTTCGT. 18 3 20 0.05 1 0 0 0 0 0 0 1
...................................AATGCAGCTCCAGCCTT...................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0

Anti-sense strand reads

TTGGAAACGGTATAGGTGTCGTCATATGACTAGGGTTACGTCGAGGTCGGGGTCGAGGACCACAAAGAAGCCATGGTTCAGGACGAGGTCGAGTCTGAGGTCGGGGGTGAAGTAGAGTTCGAGTCCAAGGGTGTAGAGGAGTAGGAAGTCGGTGGATGTCGTCGATAAGGTTGGTAGGACCGATATCGAAATTAGGCGTCTGTCCATATATGCTCATGTCGTCACCGATGGTCGTCCTGTGGTCAAGCAA
**************************************************...(((...((((.......(((....((((..((....))...))))...)))...............(((.(((.................)))..)))))))...)))((((((.(((.......)))..))))))...........**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
SRR902009
testis
SRR618934
dsim w501 ovaries
M023
head
GSM343915
embryo
SRR553488
RT_0-2 hours eggs
SRR553486
Makindu_3 day-old ovaries
...............................................................................................................GTAGAGTTCGAGTCCAAGGGTG..................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................GGTTCAGGACGAGGTCAAGT............................................................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0
............................................................................................................................................................TGTCGTCCATAAGATTGG............................................................................ 18 2 3 0.33 1 0 0 1 0 0 0 0
...........................................................................TTTCAGGACGAGGTTGAGTGT.......................................................................................................................................................... 21 3 5 0.20 1 0 0 0 1 0 0 0
..........................................................................................................................................TAGTAGGAAGTGGGTGGA.............................................................................................. 18 2 5 0.20 1 0 0 0 0 1 0 0
......................................................................................................................TCGAGGCCAAGGGTG..................................................................................................................... 15 1 15 0.13 2 0 0 2 0 0 0 0
................................GGGTTGACTCGAGGTCGGGG...................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 1 0
...............................................................................................................................................................TGTCGATGAGGTTGGCAGG........................................................................ 19 3 18 0.06 1 0 0 0 1 0 0 0
......................................................................................................................................................GGTGGAAGTCGTCGAACAGGT............................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:14413797-14414046 - dsi_16175 AACCTT---TGCCATATCCACAGCAGTA----------------------------------------------------------------TACTGATCCCAATG------------------------------CAGCTCCAGCCCCAGCTCCTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTTCG---------GT---ACCAAGTCCTGCT------CCAGCTCAGACTCCAG------CC------------------------CCCAC------------TTCATCTCAAGCTCAGGTTCCCACATCTCCTCA---TCCTTCA---GCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGCTTTAATCCGCAGACAGGTATATACGAGTACAGCAGTGGCTACCAGCAGGACACCAGTT---CGTT
droSec2 scaffold_0:6885799-6886048 - AACCTT---TGTCAGATCCACATCAGTA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCTCCAGCCCCAGCTCCTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTTCT---------GT---ACCAAGTCCTGCT------CCAGTTCAGACTCCAG------TC------------------------CCCAC------------TTCATTTCAAGCTCAGGTTCCCACATCTCCTCA---TCCTTCG---GCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGCTTTAATCCGCAGACAGGTATATACGAGTACAGCAGTGGGTATCAGCAGGACACCAGTT---CGTT
dm3 chr3L:14764964-14765213 - AACCTT---TGCCATATCCACAGCAGTA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCTCCAGCTCCAGCTCCTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTTCT---------GT---ACCAAGTCCTGTT------CCAGTACCGACTCCAG------CC------------------------CCCAC------------TTCATCTCAAGCTCAGGTTCCCACATCTCCGCA---TCCTTCG---GCCACCTACACCAGCTATTCCAACCATCCTGGCTATAGCTTTAATCCGCAGACAGGTAAATACGAGTACAGCAGTGGCTATCAGCAGGATACCAGTT---CGTT
droEre2 scaffold_4784:14732174-14732423 - CGCCTT---TGGCATATCCACAGCAGTA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCTGGTGCCCCAGCTCCTGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTCCT---------GT---TCCAAGTCCTGCT------CCAGCTCAGACTGCAG------CC------------------------CCCAC------------TTCATCTCAAGCTCAGGTTAACACGTCTCCTCA---TCCCTCG---GCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGCTTTAATCCGCAGACAGGCAAATACGAGTACAGCAGTGGCTATCAGCAGGACACCAGTT---CGTT
droYak3 3L:14852891-14853128 - AACCAC---TGCCATATCCACAGCAGTA----------------------------------------------------------------CACTGAACCCAATG------------------------------CAGCTGCAGCTCCAGCTCCTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTCCT---------GT---TCCAAGTCCTGCT------CCA------------G------CC------------------------CCCAC------------TCCATCTCAAGCCCAGGCTACCACGACCCCTCA---TCCTTCG---GCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGTTTCAATCCACAGACTGGTATATACGAGTACAGCAGTGGCTATCAGCAAGACACCAGTT---CGTT
droEug1 scf7180000409456:1015234-1015480 - AAAACA---TGCCGTATCCACAGCAGTA----------------------------------------------------------------CAATGATCCGAATA------------------------------CCGTACTAGCTCCAACGGCAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTCCT---------GT---TCCAAGTCCAGCA------CCAGCTCAGATTCCTG------TA------------------------CCCGC------------TCCATCTCCAGTTCCAGTTCCAACATC---TCA---TTCTTCC---GCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGCTTCAATCCCCTGACGGGTAAATACGAGTACAGCAGTGGCTATCAGCAGGACAGTAGCT---CCAT
droBia1 scf7180000302428:5117578-5117792 + C--CTG---TGCCGTATCC-------------------------------------------------------------------------------------------------------------------------------TCCAGCTCCTGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCCCCT---------GT---TCCCAGTCCTGCT------CCAGCTCAGACTCCCG------CA------------------------CCCAC------------TTCATCTCAAGCTAATGGGGTCACATCTCCCAA---TCCTGGT---CCCACCTACAGCAGCTACTCCAACCATCCTGGCTACAGCTTCAATCCGCAGACGGGTAAATACGAGTACAGCAGTGGCTATCAGCAGGAAAGCAGCG---CCTT
droTak1 scf7180000412281:10448-10683 - C--CTG---TGCCGTATTCTCAGCAATA----------------------------------------------------------------CAGTGATGCCAATG------------------------------CTACTCTGACTCCAGCTCCTGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTACT---------GT---TCCGAGTGCTGTT------CC------------CC------CA------------------------CCCAC------------TTCATCTCAAGCTTCCGCTGTCACATCTCCTCA---GCCTTCG---GCCACCTACACCAGCTATTCAAACCATCCTGGCTACAGCTTTAATCCACAGACGGGTGTATACGAGTACAGCAGTGGCTACCAGCAGGACAGCAGCT---CCTT
droEle1 scf7180000491000:9995-10250 - CATCCA---TGCAGTATCCACAGCAGTT----------------------------------------------------------------CGGTGATACCCATG------------------------------CACCTCCAGCTCCAGCTCCTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCTCCC---------GT---GCCGAGTCCAGCTCCAGCTCCAGCTCAAACGCCTG------CA------------------------TCCAC------------ACCAGCTCAGGCCACAGTTCCCGCCTCTACCTA---TCACTCA---GCCAACTACAGCAGCTACTCCAACCATCCCGGCTACAGTTTCAATCCGCAGACGGGAGTATTCGAGTACAACAGTGGCTATCAGCAGGATAGCAGCT---CCCT
droRho1 scf7180000777233:39252-39501 + AGTCTT---TGCAGTATCCACAGCAGTA----------------------------------------------------------------TAGTGATCCCAATG------------------------------CAGCTCCAGTTTCAGCTCCTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCTCCT---------GT---CCCAAGTCCAGTT------CCTGCGCAAACTCCTG------TA------------------------CCCAC------------TCCATCTCAAGCTCCAGTTCCCGCATCTCCTCA---TCCTTCA---GGAACCTACACCAGCTACTCCAACCATCCCGGCTACAGCTTCAATCCGCAGACGGGAAAATACGAGTACAGCAGTGGCTATCAGCAAGACAGCAGCT---CCTT
droFic1 scf7180000453807:221606-221837 - AATCCC---TGCAGTATCCACAGCAGTA----------------------------------------------------------------CAGTGATCCCAATG------------------------------CAGCTCCAGCCTCCGCACCTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCTCCT---------GT---TCCGAATCCTGCT------CAAGCTCAAAACGCTG------CG------------------------CCAAC------------ATCATCGCAAGCTGCAGTTCCTGTTTCGCCACA---TCCTTCT---GCCAACTACAGCAGTTATTCCAATCATCCTGGCTACAGCTTCAATCCTCAGACCGGACAATACGAGTACAGTAGTGGA--------GGA-------------GT
droKik1 scf7180000302383:913510-913744 - AATCCT---TGCAGTATCCCCAGGC----------------------------------------------------------------------------------------------------------------AG------------------GTTCATC---------------------------------------------------------------------------------------------------------TCC---TGCTCCGGCTCCTGAG------------------------------------------------------------------------GCATCTCCC---------AT---TCC------------------------------TGCACCCATACCAGCTGGAGTTCCCAACAATCCTCCCGT------------TCCCACACAAGCTCA---------ACCACCTCA---ACCCTCA---GCCACGTACAGCAGCTACTCCAATCATCCCGGCTACAGCTTCAATCCCCAGACGGGCAAGTACGAGTACAGCAGTGGCTATCAGCAGGACAGCAGTT---CGGT
droAna3 scaffold_13337:4339331-4339561 + ATCCTC----GCCAG----------------------------------------------------------------------------------------------------------CTACTGCTGCTGCCGCTCCTGTTGTGCCAGCTCCTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTCTCCT---------GC---TCTGCCCCCTGTT------GC---TCCAAGCCAAG------CC------------------------TCCAT------------CCCCCCTCAAG------TTCCTGCATCTTCACAAGCTTCTTCG---GCCACCTACATCAGCTACTCCAACCATCCGGGGTACAGCTTCAATCCCCAGACCGGAAACTACGAGTACAGCAGTGGATATCAGCAGGACAATAGTG---CTCT
droBip1 scf7180000395450:466078-466297 + AATCCT---CGCCAG----------------------------------------------------------------------------------------------------------CTG---------------------CTGCTGCTCCTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTCTCCT---------GC---TCC------TGCT------CCAG------------------CACCCTCAGTTGCTCCAAGCCAAGCTTCCGT------------GCCCCCTCA------AGTTCCTGCATCTTCACAAGCTCCTTCG---GCCACCTACATCAGCTACTCCAACCATCCAGGCTACAGCTTCAATCCGCAGACCGGGATCTACGAGTACAGCAGCGGATACCAGCAAGACAACAGTG---CCCT
dp5 XR_group6:980701-980996 + CAGCATCCCAGCAGTACCCCCAGCAATA----------------------------------------------------------------CGGTGATCTCCAAGCGACAGTATATCCCGCGACTGCTGCTGCTGCTGCTCCGGCTCCAGCTGCTGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGCTTCCAATCCTCCGGTAGCCTCCAGTCCAGCT------CAAGCTCCCACTCCAG------CT------------------------CCCACTCCAGCTCCCACTCCAGCTCCCGCCCCCGCTGCAGC------------GCCCGCT---CCCACGTACATCAGCTACTCCAACCATCCTGGCTACAGCTACAATCCGCAGACAGGCGCCTACGAGTACAGCAGTGGCTACCAGCAGGAGAACATCT---CC--
droPer2 scaffold_12:1659600-1659880 + CATCCC---AGCAGTATCCCCAGCAATA----------------------------------------------------------------CGGTGATCTCCAAGCGACAGTATATCCCGCGACTGCTGCTGCTGCTGCTCCGGCTCCAGCTGCTGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGCTTCCAATCCTCCGGTAGCCTCCAGTCCAGCT------CAAGCTCCCACTCCAG------CT------------------------CCCAC------------TCCAGCTCCCGCTCCCGCTGCAAC------------TCCCGCT---CCCACGTACATCAGCTACTCCAACCATCCTGGCTACAGCTACAATCCGCAGACAGGCGCCTACGAGTACAGCAGTGGCTACCAGCAGGAGAACATCT---CC--
droWil2 scf2_1100000004949:1057650-1058001 + AATCTT---TTCAATATCCGCAGCCAAG----------------------------------------------------------------CAATGATGTCCAGC------------ATGCTG------------CGGCTGTACCTGTCGCTCCGGCC-----GCCATTCCTCCTCCTTCGATCGTTTCACCCCATTCCATTTCATCTCTTCCCGCATCGAATTCTGTGCCCTCCATAGCACCTACATCCTATCACACAACGACGCCC---ACTC-TTTCAGTTACTGCACCCAT------------------------------TTCGAATGCCACTGCC---------------------GGTATCCTT---------GC---CTCAAATCCTGTT------------------------------------------------------------------------------------------GCTAC------------CAATGGT---CCCAAGTTCATCAGCTACTCCAACCATCCCGGATATGGCTTTAATCCTCAAACGGGCATCTATGACTATAGCAGCGGTTATCAGCAGGAAGTTAGCTACGCACT
droVir3 scaffold_13049:13954374-13954583 - AGCCTC---AGATGCCAGCGCAGCC---------------------AGCTTTGTATCCTTCACAGGCGGTGCCATCAACGCCAGCAGCCATGCAA-------------------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAGTGGCCACCGCCGGCTCAGTGCC---AGTTCCCAG---------------------------------------------------------------------------------------------------------------------------------------------TGTTGAT---ACCAATTTCTTGAGCTACTCAAATCATCCTGGCTACAGCTTTAATCCACAAACGGGCATCTATGAGTACAGCAGTGGCTATCAGCATGAGAGCA----------
droMoj3 scaffold_6680:13370133-13370332 + AGCCTG---TGCTTTATCCCTCGCAA-------------------------------------------------------------------------------G---------------CAG---------------------CAGC------------------------------------------------------------------------------------------------------------------------TCA---GCC---------------CACGCCTACCGCCGCTTCAGCGCCCACACAATACCCAGTGGGCAGCG---------------CTGTCCCCGG---------------------------------------------------------------------------------------------------------------------------------------------CATTGAGGCGAACAACTATTTGGGCTACTCCAATCATCCGGGCTACAGCTTCAATCCGCAGACAGGATTATTCGAGTACAGCAGCGGCTATCAGCATGACACCAAT--------
droGri2 scaffold_15110:16245873-16246105 + AAATTT---CTCCATACGCTCAGCAACAAATAGCGACGCCACAGCCAGCTTTATATG--------------------------------------------CAACA------------------------------CAACAACAACA-----------------------------------------------------------------------------------------------------------------------------ACACGCTCCGGCTGCGGCAGCCACGCCT-------------------------------------TCGCTGCCTCAG--CCAGCTGCAGCCAG---------------------------------------------------------------------------------------------------------------------------------------------TGCTGAG---TCGAACTATTTGAGCTACTCCAACCATCCCGGCTACAGTTTCAATCCACAAACGGGTGTCTATGAATACAGCAGCGGCTATCAGCATGCCAGCAATC--ACATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AACCTT---TGCCATATCCACAGCAGTA----------------------------------------------------------------TACTGATCCCAATG------------------------------CAGCTCCAGCCCCAGCTCCTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTTCG---------GT---ACCAAGTCCTGCT------CCAGCTCAGACTCCAG------CC------------------------CCCAC------------TTCATCTCAAGCTCAGGTTCCCACATCTCCTCA---TCCTTCA---GCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGCTTTAATCCGCAGACAGGTATATACGAGTACAGCAGTGGCTACCAGCAGGACACCAGTT---CGTTSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCT------CCAGCTCAGACTCCAG------CC------------------------CC.....................................................................................................................................................................2411.00100100000000000000
......................................................................................................AATG------------------------------CAGCTCCAGCCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
droSec2
AACCTT---TGTCAGATCCACATCAGTA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCTCCAGCCCCAGCTCCTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTTCT---------GT---ACCAAGTCCTGCT------CCAGTTCAGACTCCAG------TC------------------------CCCAC------------TTCATTTCAAGCTCAGGTTCCCACATCTCCTCA---TCCTTCG---GCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGCTTTAATCCGCAGACAGGTATATACGAGTACAGCAGTGGGTATCAGCAGGACACCAGTT---CGTTSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
...........................A----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---TCCTTCG---GCCACCTACAGCAGCT........................................................................................2511.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGGTATCAGCAGGACACCAGT........2511.0010100
..............................................................................................................................................................................................................................................................................................................................................................................TCTTCT---------GT---ACCAAGTCCTGCT------.......................................................................................................................................................................................................................2111.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCTTTAATCCGCAGACAGGT...............................................2411.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGCAGTGGGTATCAGC...................2011.0010100
...CTT---TGTCAGATCCACATCAGTA----------------------------------------------------------------CA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
dm3
AACCTT---TGCCATATCCACAGCAGTA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCTCCAGCTCCAGCTCCTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTTCT---------GT---ACCAAGTCCTGTT------CCAGTACCGACTCCAG------CC------------------------CCCAC------------TTCATCTCAAGCTCAGGTTCCCACATCTCCGCA---TCCTTCG---GCCACCTACACCAGCTATTCCAACCATCCTGGCTATAGCTTTAATCCGCAGACAGGTAAATACGAGTACAGCAGTGGCTATCAGCAGGATACCAGTT---CGTTSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAAATACGAGTACAGCAG..............................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGGTAAATACGAGTA....................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATCCTGGCTATAGCTTC..............................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGCTATAGCTTTAATCCGCAGA....................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------TTCATCTCAAGCTCAGGTTCCC................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATCAGCAGGATACCA..........1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................ACTGATCCCAATG------------------------------CAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................AGCTCCTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTTCT---------GT---ACCAAGTC..................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AGCTCCTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTTCT---------GT---A.........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGTA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GACTCCAG------CC------------------------CCCAC------------TTCATCTCAA............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................T---------GT---ACCAAGTCCTGTT------CCAGTACCGAC............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCAGACAGGTAAATACGA.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GTTTCTTCT---------GT---ACCAAGTC..................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGACAGGTAAATACGAG......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGCAGTGGCTATCAGCAGG................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCAGACAGGTAAATACG........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCAGACAGGTAAATACGAGTAC...................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGCTATAGCTTTAATC..........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACCGACTCCAG------CC------------------------CCCAC------------T.....................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACGAGTACAGCAGTGGCTATCAGT...................2711.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGACAGGTAAATACGAGT.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TCCTGTT------CCAGTACCGACTCCAG------CC------------------------CC.....................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCA---TCCTTCG---GCCACCTACACCAG..........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGTACAGCAGTGGCTATCAGCA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTAAATACGAGTACAGCAG..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCAAGCTCAGGTTCCC................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGGTAAATACGAGTACA..................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGTT------CCAGTACCGACTCCA........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CTCCAGCTCCTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTT.............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCACATCTCCGCA---TCCTTCG---GCCA....................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACCATCCTGGCTATAGCT................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACACCAGCTATTCCAACCATCCTGGC.......................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCG---GCCACCTACACCAGCT........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................T---ACCAAGTCCTGTT------CCAGTACCGACTCC.........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TG------------------------------CAGCTCCAGCTCCAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1951.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000200000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCTCCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATCCTGGCTATAGCTCC..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGGCTATCAGCAGGA...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATCTCCGCA---TCCTTCG---GC......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGGATACCAGTT---CG..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................GCAGTA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TCCAGCTCCAGCTCCTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAAATACGAGTACAGCAGT.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCACATCTCCGCA---TCCTTCG---GC......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------TTCATCTCAAGCTCAGG.....................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTACAGCAGTGGCTA........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATACGAGTACAGCAGTGGCTAT.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................CACTGATCCCAATG------------------------------CAGCTCCAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTAAATACGAGTACAGCAGTGGC..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
........................................................................................................TG------------------------------CAGCTCCAGCTCCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................G------------------------------CAGCTCCAGCTCCAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TG------------------------------CAGCTCCAGCTCCAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGCCTT---TGGCATATCCACAGCAGTA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCTGGTGCCCCAGCTCCTGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTCCT---------GT---TCCAAGTCCTGCT------CCAGCTCAGACTGCAG------CC------------------------CCCAC------------TTCATCTCAAGCTCAGGTTAACACGTCTCCTCA---TCCCTCG---GCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGCTTTAATCCGCAGACAGGCAAATACGAGTACAGCAGTGGCTATCAGCAGGACACCAGTT---CGTTSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------CCCAC------------TTCATCTCAAGCTCAGGTTAACAC..............................................................................................................................3018.0080000008
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACACGTCTCCTCA---TCCCTCG---GCCACC..................................................................................................2811.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATAGCTTTAATCCGCAGACAGGC...............................................2611.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTTTAATCCGCAGACAGGC...............................................2311.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCAGTGGCTATCAGCAGGA...............2311.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAGACTGCAG------CC------------------------CCCAC------------TA....................................................................................................................................................2311.0010000010
......................GCAGTA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGGTTAACACGTCTCC........................................................................................................................2011.0010000010
.........................GTA----------------------------------------------------------------CACTGATCCCAATG------------------------------CAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCT------CCAGCTCAGACTGC.........................................................................................................................................................................................................1811.0011000000
.....T---TGGCATATCCACAGCAGTA----------------------------------------------------------------CACTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGCTATAGCTTTAATCCGCAGA....................................................2611.0011000000
..............TATCCACAGCAGTA----------------------------------------------------------------CACTGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCTACAGCAGCTATTCCAACCATCC...........................................................................2811.0011000000
droYak3
AACCAC---TGCCATATCCACAGCAGTA----------------------------------------------------------------CACTGAACCCAATG------------------------------CAGCTGCAGCTCCAGCTCCTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTCCT---------GT---TCCAAGTCCTGCT------CCA------------G------CC------------------------CCCAC------------TCCATCTCAAGCCCAGGCTACCACGACCCCTCA---TCCTTCG---GCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGTTTCAATCCACAGACTGGTATATACGAGTACAGCAGTGGCTATCAGCAAGACACCAGTT---CGTTSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAGACTGGTATATACGAGT.....................................2211.00101000000000
...........................A----------------------------------------------------------------CACTGAACCCAATG------------------------------CAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCAATCCACAGACTGGC...............................................2011.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTATTCCAACCATCCT..........................................................................2011.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACGAGTACAGCAGTGGCTATCAG....................2711.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTACCACGACCCCTCA---TCCTTCG---GC......................................................................................................2711.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCAATCCACAGACTGGTATATACGA.......................................2811.00101000000000
........................AGTA----------------------------------------------------------------CACTGAACCCAATG------------------------------CAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---TCCTTCG---GCCACCTACAGCAGC.........................................................................................2511.00101000000000
droEug1
AAAACA---TGCCGTATCCACAGCAGTA----------------------------------------------------------------CAATGATCCGAATA------------------------------CCGTACTAGCTCCAACGGCAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTCCT---------GT---TCCAAGTCCAGCA------CCAGCTCAGATTCCTG------TA------------------------CCCGC------------TCCATCTCCAGTTCCAGTTCCAACATC---TCA---TTCTTCC---GCCACCTACAGCAGCTATTCCAACCATCCTGGCTATAGCTTCAATCCCCTGACGGGTAAATACGAGTACAGCAGTGGCTATCAGCAGGACAGTAGCT---CCATSizeHit CountTotal NormTotal
No Reads
droBia1
C--CTG---TGCCGTATCC-------------------------------------------------------------------------------------------------------------------------------TCCAGCTCCTGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCCCCT---------GT---TCCCAGTCCTGCT------CCAGCTCAGACTCCCG------CA------------------------CCCAC------------TTCATCTCAAGCTAATGGGGTCACATCTCCCAA---TCCTGGT---CCCACCTACAGCAGCTACTCCAACCATCCTGGCTACAGCTTCAATCCGCAGACGGGTAAATACGAGTACAGCAGTGGCTATCAGCAGGAAAGCAGCG---CCTTSizeHit CountTotal NormTotal
No Reads
droTak1
C--CTG---TGCCGTATTCTCAGCAATA----------------------------------------------------------------CAGTGATGCCAATG------------------------------CTACTCTGACTCCAGCTCCTGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTACT---------GT---TCCGAGTGCTGTT------CC------------CC------CA------------------------CCCAC------------TTCATCTCAAGCTTCCGCTGTCACATCTCCTCA---GCCTTCG---GCCACCTACACCAGCTATTCAAACCATCCTGGCTACAGCTTTAATCCACAGACGGGTGTATACGAGTACAGCAGTGGCTACCAGCAGGACAGCAGCT---CCTTSizeHit CountTotal NormTotal
No Reads
droEle1
CATCCA---TGCAGTATCCACAGCAGTT----------------------------------------------------------------CGGTGATACCCATG------------------------------CACCTCCAGCTCCAGCTCCTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCTCCC---------GT---GCCGAGTCCAGCTCCAGCTCCAGCTCAAACGCCTG------CA------------------------TCCAC------------ACCAGCTCAGGCCACAGTTCCCGCCTCTACCTA---TCACTCA---GCCAACTACAGCAGCTACTCCAACCATCCCGGCTACAGTTTCAATCCGCAGACGGGAGTATTCGAGTACAACAGTGGCTATCAGCAGGATAGCAGCT---CCCTSizeHit CountTotal NormTotal
No Reads
droRho1
AGTCTT---TGCAGTATCCACAGCAGTA----------------------------------------------------------------TAGTGATCCCAATG------------------------------CAGCTCCAGTTTCAGCTCCTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCTCCT---------GT---CCCAAGTCCAGTT------CCTGCGCAAACTCCTG------TA------------------------CCCAC------------TCCATCTCAAGCTCCAGTTCCCGCATCTCCTCA---TCCTTCA---GGAACCTACACCAGCTACTCCAACCATCCCGGCTACAGCTTCAATCCGCAGACGGGAAAATACGAGTACAGCAGTGGCTATCAGCAAGACAGCAGCT---CCTTSizeHit CountTotal NormTotal
No Reads
droFic1
AATCCC---TGCAGTATCCACAGCAGTA----------------------------------------------------------------CAGTGATCCCAATG------------------------------CAGCTCCAGCCTCCGCACCTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCTCCT---------GT---TCCGAATCCTGCT------CAAGCTCAAAACGCTG------CG------------------------CCAAC------------ATCATCGCAAGCTGCAGTTCCTGTTTCGCCACA---TCCTTCT---GCCAACTACAGCAGTTATTCCAATCATCCTGGCTACAGCTTCAATCCTCAGACCGGACAATACGAGTACAGTAGTGGA--------GGA-------------GTSizeHit CountTotal NormTotal
No Reads
droKik1
AATCCT---TGCAGTATCCCCAGGC----------------------------------------------------------------------------------------------------------------AG------------------GTTCATC---------------------------------------------------------------------------------------------------------TCC---TGCTCCGGCTCCTGAG------------------------------------------------------------------------GCATCTCCC---------AT---TCC------------------------------TGCACCCATACCAGCTGGAGTTCCCAACAATCCTCCCGT------------TCCCACACAAGCTCA---------ACCACCTCA---ACCCTCA---GCCACGTACAGCAGCTACTCCAATCATCCCGGCTACAGCTTCAATCCCCAGACGGGCAAGTACGAGTACAGCAGTGGCTATCAGCAGGACAGCAGTT---CGGTSizeHit CountTotal NormTotal
No Reads
droAna3
ATCCTC----GCCAG----------------------------------------------------------------------------------------------------------CTACTGCTGCTGCCGCTCCTGTTGTGCCAGCTCCTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTCTCCT---------GC---TCTGCCCCCTGTT------GC---TCCAAGCCAAG------CC------------------------TCCAT------------CCCCCCTCAAG------TTCCTGCATCTTCACAAGCTTCTTCG---GCCACCTACATCAGCTACTCCAACCATCCGGGGTACAGCTTCAATCCCCAGACCGGAAACTACGAGTACAGCAGTGGATATCAGCAGGACAATAGTG---CTCTSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCTTCG---GCCACCTACATCAGCT........................................................................................2512.002000002
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCTTCAATCCCCAGACCGGAA..............................................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................CTCCT---------GC---TCTGCCCCCTGTT------G......................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGCATCTTCACAAGCTT................................................................................................................2011.001010000
............................................................................................................................................TGTTGTGCCAGCTCCTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTCTCC.........................................................................................................................................................................................................................................................2711.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCCAGACCGGAAACTACGAGTACA..................................2711.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCCCCAGACCGGAAAC............................................2011.001000001
.............................................................................................................................................GTTGTGCCAGCTCCTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTCTC..........................................................................................................................................................................................................................................................2511.001010000
droBip1
AATCCT---CGCCAG----------------------------------------------------------------------------------------------------------CTG---------------------CTGCTGCTCCTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTCTCCT---------GC---TCC------TGCT------CCAG------------------CACCCTCAGTTGCTCCAAGCCAAGCTTCCGT------------GCCCCCTCA------AGTTCCTGCATCTTCACAAGCTCCTTCG---GCCACCTACATCAGCTACTCCAACCATCCAGGCTACAGCTTCAATCCGCAGACCGGGATCTACGAGTACAGCAGCGGATACCAGCAAGACAACAGTG---CCCTSizeHit CountTotal NormTotal
No Reads
dp5
CAGCATCCCAGCAGTACCCCCAGCAATA----------------------------------------------------------------CGGTGATCTCCAAGCGACAGTATATCCCGCGACTGCTGCTGCTGCTGCTCCGGCTCCAGCTGCTGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGCTTCCAATCCTCCGGTAGCCTCCAGTCCAGCT------CAAGCTCCCACTCCAG------CT------------------------CCCACTCCAGCTCCCACTCCAGCTCCCGCCCCCGCTGCAGC------------GCCCGCT---CCCACGTACATCAGCTACTCCAACCATCCTGGCTACAGCTACAATCCGCAGACAGGCGCCTACGAGTACAGCAGTGGCTACCAGCAGGAGAACATCT---CC--SizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.......................................................................................................................................GCTGCTCCGGCTCCAGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGCT------CAAGCTCCCACTCCAG------CT------------------------CC.....................................................................................................................................................................2811.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACTCCAACCATCCTGGCT......................................................................2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCTACTCCAACCATCCT..........................................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATCCGCAGACAGGCGC.............................................2011.0010000010000
.............GTACCCCCAGCAATA----------------------------------------------------------------CGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACAATCCGCAGACAGGC...............................................2111.0010010000000
.............GTACCCCCAGCAATA----------------------------------------------------------------CGGTGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCCAACCATCCTGGCTACAG..................................................................2311.0010100000000
droPer2
CATCCC---AGCAGTATCCCCAGCAATA----------------------------------------------------------------CGGTGATCTCCAAGCGACAGTATATCCCGCGACTGCTGCTGCTGCTGCTCCGGCTCCAGCTGCTGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGCTTCCAATCCTCCGGTAGCCTCCAGTCCAGCT------CAAGCTCCCACTCCAG------CT------------------------CCCAC------------TCCAGCTCCCGCTCCCGCTGCAAC------------TCCCGCT---CCCACGTACATCAGCTACTCCAACCATCCTGGCTACAGCTACAATCCGCAGACAGGCGCCTACGAGTACAGCAGTGGCTACCAGCAGGAGAACATCT---CC--SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAATCCGCAGACAGGC...............................................1914.004400000
...................................................................................................................ATCCCGCGACTGCTGCTGCTGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCCGCTGCAAC------------TCCCGCT---C.......................................................................................................2211.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGCAAC------------TCCCGCT---CCCACGTACATCA...........................................................................................2911.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACAATCCGCAGACAGG................................................2011.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGCAGTGGCTACCAGCA..................2111.001010000
...........................................................................................................GACAGTATATCCCGCGACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........................................................................................................................................................................................................................................................................................................................................................................................CTCCGGTAGCCTCCAGTCC.................................................................................................................................................................................................................................1911.001010000
droWil2
AATCTT---TTCAATATCCGCAGCCAAG----------------------------------------------------------------CAATGATGTCCAGC------------ATGCTG------------CGGCTGTACCTGTCGCTCCGGCC-----GCCATTCCTCCTCCTTCGATCGTTTCACCCCATTCCATTTCATCTCTTCCCGCATCGAATTCTGTGCCCTCCATAGCACCTACATCCTATCACACAACGACGCCC---ACTC-TTTCAGTTACTGCACCCAT------------------------------TTCGAATGCCACTGCC---------------------GGTATCCTT---------GC---CTCAAATCCTGTT------------------------------------------------------------------------------------------GCTAC------------CAATGGT---CCCAAGTTCATCAGCTACTCCAACCATCCCGGATATGGCTTTAATCCTCAAACGGGCATCTATGACTATAGCAGCGGTTATCAGCAGGAAGTTAGCTACGCACTSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
......................................................................................................CAGC------------ATGCTG------------CGGCTGTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
..........................................................................................................................................................................................................................................................................CCC---ACTC-TTTCAGTTACTGCA.........................................................................................................................................................................................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGT---CCCAAGTTCATCAG..........................................................................................2011.00100010
..............................................................................................................................................................C-----GCCATTCCTCCTCCTTCGATCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTATGACTATAGCAGCGGT..........................2111.00100100
.......................CCAAG----------------------------------------------------------------CAATGATGTCCAGC------------ATGCTG------------CGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
.............................................................................................................................................................................................................................................................................................................................................GCCACTGCC---------------------GGTATCCTT---------...............................................................................................................................................................................................................................................1811.00100010
.............................................................................................................................................GTACCTGTCGCTCCGGCC-----GCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...CTT---TTCAATATCCGCAGCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
droVir3
AGCCTC---AGATGCCAGCGCAGCC---------------------AGCTTTGTATCCTTCACAGGCGGTGCCATCAACGCCAGCAGCCATGCAA-------------------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAGTGGCCACCGCCGGCTCAGTGCC---AGTTCCCAG---------------------------------------------------------------------------------------------------------------------------------------------TGTTGAT---ACCAATTTCTTGAGCTACTCAAATCATCCTGGCTACAGCTTTAATCCACAAACGGGCATCTATGAGTACAGCAGTGGCTATCAGCATGAGAGCA----------SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
..................CGCAGCC---------------------AGCTTTGTATCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGGCATCTATGAGTACA..................................1911.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGGCATCTATGAGTAC...................................1911.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT---ACCAATTTCTTGAGCTACTC....................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GGCCACCGCCGGCTCAGTGCC---AGTTCCC.................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCACAAACGGGCATCT...........................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCCACCGCCGGCTCAGTGC............................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............TGCCAGCGCAGCC---------------------AGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTCCCAG---------------------------------------------------------------------------------------------------------------------------------------------TGTTGAT---ACCAATTTCTTG............................................................................................2611.001000000000000000000000000000000001000000000000000000000000000000
.....C---AGATGCCAGCGCAGCC---------------------AGCTTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAT---ACCAATTTCTTGAGA.........................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
............................................................................................................................................................................................................................................................................................................................................................GTGCC---AGTTCCCAG---------------------------------------------------------------------------------------------------------------------------------------------TGTTGAT---........................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGCAGTGGCTATCAGCATGAGAG............2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT---ACCAATTTCTTGAGCTACT.....................................................................................2211.001000000001000000000000000000000000000000000000000000000000000000
......................................................................................GCCATGCAA-------------------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAGTGGC.............................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................CATCAACGCCAGCAGCCATGCAA-------------------T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACTCAAATCATCCTGGCTACAG..................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGCCTG---TGCTTTATCCCTCGCAA-------------------------------------------------------------------------------G---------------CAG---------------------CAGC------------------------------------------------------------------------------------------------------------------------TCA---GCC---------------CACGCCTACCGCCGCTTCAGCGCCCACACAATACCCAGTGGGCAGCG---------------CTGTCCCCGG---------------------------------------------------------------------------------------------------------------------------------------------CATTGAGGCGAACAACTATTTGGGCTACTCCAATCATCCGGGCTACAGCTTCAATCCGCAGACAGGATTATTCGAGTACAGCAGCGGCTATCAGCATGACACCAAT--------SizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................GCAGCG---------------CTGTCCCCGG---------------------------------------------------------------------------------------------------------------------------------------------CATTGAGGC.........................................................................................................2512.002000002
..............................................................................................................................................................................................................................................................................................................................ACACAATACCCAGTGGGCAGCG---------------CT.......................................................................................................................................................................................................................................................................2411.001100000
.............................................................................................................................................................................................................................................................................................................................CACACAATACCCAGTGGGCAGCG---------------CT.......................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCGAACAACTATTTGGGCTACT.....................................................................................2511.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGGCGAACAACTATTTGG...........................................................................................2211.001000001
droGri2
AAATTT---CTCCATACGCTCAGCAACAAATAGCGACGCCACAGCCAGCTTTATATG--------------------------------------------CAACA------------------------------CAACAACAACA-----------------------------------------------------------------------------------------------------------------------------ACACGCTCCGGCTGCGGCAGCCACGCCT-------------------------------------TCGCTGCCTCAG--CCAGCTGCAGCCAG---------------------------------------------------------------------------------------------------------------------------------------------TGCTGAG---TCGAACTATTTGAGCTACTCCAACCATCCCGGCTACAGTTTCAATCCACAAACGGGTGTCTATGAATACAGCAGCGGCTATCAGCATGCCAGCAATC--ACATTSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
.......................CAACAAATAGCGACGCCACAGCCAGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
.............................ATAGCGACGCCACAGCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
...................................................................................................................................................................................................................................................................................................................................................................CTGCAGCCAG---------------------------------------------------------------------------------------------------------------------------------------------TGCTGAG---TCGAA...................................................................................................2211.00110

Generated: 05/19/2015 at 12:24 AM