ID:dsi_16131 |
Coordinate:2r:5515988-5516137 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
CATACACACAATGCATTAGGCAGTGCCACGCCCACAAAACGTCCCGTAATGCCATTGTGGTCCATAATGAGCAAAGCTTCCCTGGCAGCCATTAGCTTTTGTTTCGACCTGCAACCACCATACACCGCCCACCACCCACAATCCGCGAACTTCCTTTGTGGCCCGACCCCCTAATCGTTCCCACTGCTCCTCTCTTCCAGCTCCGCCAGCCTCGATCGAGATCAAAGGTTACAGCCACAATTCCAAGGTG
**************************************************(((((((((...))))))).))..(((.....(((.(((.(((((...((((........))))............................(((((((.....))))))).........))))).))).)))..)))............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
M025 embryo |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................................................TCCTCTCTTCCAGCTCCACCA.......................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................................................................................................................................GATCGAGATCAAAGGTTACAG................ | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .............................................................................................................................................................................ATCGTTCCCATTGCT.............................................................. | 15 | 1 | 15 | 0.20 | 3 | 0 | 0 | 3 |
| ...........................................................................................................................................................................................TCCTATCTACCAGGTCCG............................................. | 18 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 |
| ..............................................................................................................................................CTGGGAACTTCCTTTGTGA......................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 |
|
GTATGTGTGTTACGTAATCCGTCACGGTGCGGGTGTTTTGCAGGGCATTACGGTAACACCAGGTATTACTCGTTTCGAAGGGACCGTCGGTAATCGAAAACAAAGCTGGACGTTGGTGGTATGTGGCGGGTGGTGGGTGTTAGGCGCTTGAAGGAAACACCGGGCTGGGGGATTAGCAAGGGTGACGAGGAGAGAAGGTCGAGGCGGTCGGAGCTAGCTCTAGTTTCCAATGTCGGTGTTAAGGTTCCAC
**************************************************(((((((((...))))))).))..(((.....(((.(((.(((((...((((........))))............................(((((((.....))))))).........))))).))).)))..)))............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
SRR902009 testis |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
M053 female body |
M024 male body |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................AAAGAGAGCTGGACGTTGGT..................................................................................................................................... | 20 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................................TGGGTCACGAGGAGAGGAGGTCGA................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................................CCGGGCTGTGGGCTTCGCAAG...................................................................... | 21 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................TGCGGCGGGTGTTGGGTGTT............................................................................................................. | 20 | 2 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................................................AATAGCAAGGGTGACG............................................................... | 16 | 1 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................AGCTGGGCGTTGGTG.................................................................................................................................... | 15 | 1 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .................................................................................................................................................................GGGCTCAGGGATTAGTAAG...................................................................... | 19 | 3 | 13 | 0.08 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................................................................................................CCGGGCTTGGGGATTGGAA........................................................................ | 19 | 3 | 19 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..................................................CGGTAATGCCAGGTAT........................................................................................................................................................................................ | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ............................................................................................................................................................ACTACGGGCTGGGGGATA............................................................................ | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| .......................................................................................................................................................................................................CGAGCCGGTTGGACCTAGC................................ | 19 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Generated: 04/23/2015 at 03:33 PM