ID:

dsi_16104

 Coordinate:

3l:18607604-18607753 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.8 -22.9 -22.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GCTTAGAGAAACTTTATCAGGCAGAAACGGAATCCGCAAGGGGTCATCGACTAATCTCGCTGGCTCAGCAGGAAAGTTGCCGAGCATTTAATAGCGGACTCCGCCGCTCGATCGACTTTCAGTCGGCGCGCGATCTCCACTCTAACCCGATGGCCATGTCTCGGACTGTACTAATCCTGGCCGTTGCCTTGTCCTTGCAGTGCGCCGCCTTCGTGGACGGAGCCTCCATCACCTATGGAACCGGAAACGA
***********************************************************************************..........((((...))))(((.((.((((((...)))))))).)))..............((((.(((...)))))))....********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 M025
embryo
 M053
female body
 SRR618934
dsim w501 ovaries
 O001
Testis
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
......................................................................................................................................................TGGCCATGTCTCGGACTG.................................................................................. 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CCCGATGGCCATGTCTCGGACTG.................................................................................. 23 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
................................................................................................................................................ACCCGATGGCCATGTCTCGGACTG.................................................................................. 24 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0
...............................................................................................................................................AACCCGATGGCCATGTCTCGGACTG.................................................................................. 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TCTCGGACTGTACTAATCCTGGCC.................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................GCGCGATCTCCACTCTAACCC...................................................................................................... 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................CTAACCCGATGGCCATGTCTCGGACTG.................................................................................. 27 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TTCGTGGACGGAGCCTCCATC.................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................................................................................GCATTTAATAGCGGACTCCG................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................ACCCGATGGCCATGTCTCGGACTGTA................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CGGACTGTACTAATCCTGGCC.................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CCTTCGTGGACGGAGCCTCCGTCAC.................. 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................CTCCATCACCTATGGAACCGGAAAC.. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................ATGTCTCGGACTGTACTAATCCT........................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GCCGTTGCCTTGTCCTTGCAG.................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................GATGGCCATGTCTCGGACT................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................TGTCTCGGACTGTACTAATCCTGGC..................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCGGACTGTACTAATCCTGGCC.................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CACTCTAACCCGATGGCCA.............................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGTGGACGGAGCCTCCATC.................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TAACCCGATGGCCATGTCTCGGACTG.................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................GACTTTCAGTCGGCGCGCGATCTCCACT............................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................ATCGACTAATCTCGCTGGCTC........................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TGTCTCGGACTGTACTAATCCTGGCCG................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................GTCGGCGCGCGATCTCCACTCTAACC....................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CCGCCTTCGTGGACG............................... 15 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................CGATGGCCATGTCTCGGACTGTACG.............................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................ATCACCTATGGAACCGGAAAC.. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................TGTCTCGGACTGTACTAATCCTGGCC.................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................TCGGACTGTACTAATCCT........................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CTCCATCACCTATGGAACCGGAAA... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TAACCCGATGGCCATGTCTCGGACTGTA................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................GCAAGAGGTCATCGACTAATCTCGCTG............................................................................................................................................................................................ 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................CCCGATGGCCATGTCTCGGAC.................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GCAGTGCGCCGCCTTCGTG................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................CGCGCGATCTCCACTCTAACCC...................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CCCCTTCGTGGACGGACCCT......................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................GATCGACTTTCAGTCGGCG.......................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................TGGCCATGTCTCGCACTG.................................................................................. 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
...........................................................CTGGCTCAGAACGAAGGTTG........................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................TGGACGGAGCCCCCA...................... 15 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................................ACATTCAGTCAGCGCGCGT..................................................................................................................... 19 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0
...........................................................CTGGCTCAGAACGAATGTTG........................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................TATCACCACTCTAACCCGC.................................................................................................... 19 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0
...........................................................CTGGCTCAGAACGAACGTTG........................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................GTACTTGCCGTGCGCCG........................................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................TGGACGGAGCCTCTTT..................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................CTCGATCGACTTTCGTTCC............................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................CTTGGAGAGCGCCGCGTTC...................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CGAATCTCTTTGAAATAGTCCGTCTTTGCCTTAGGCGTTCCCCAGTAGCTGATTAGAGCGACCGAGTCGTCCTTTCAACGGCTCGTAAATTATCGCCTGAGGCGGCGAGCTAGCTGAAAGTCAGCCGCGCGCTAGAGGTGAGATTGGGCTACCGGTACAGAGCCTGACATGATTAGGACCGGCAACGGAACAGGAACGTCACGCGGCGGAAGCACCTGCCTCGGAGGTAGTGGATACCTTGGCCTTTGCT
**********************************************************************************..........((((...))))(((.((.((((((...)))))))).)))..............((((.(((...)))))))....*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
..........................................................................................................................................................................................................GCGGTGGAAGCGCCTGCCT............................. 19 2 1 1.00 1 0 1 0 0 0
......................................................AGAGGGACCGAGCCGACCTTT............................................................................................................................................................................... 21 3 4 0.50 2 2 0 0 0 0
......................................................AGAGGGACCGAGCCGACCTT................................................................................................................................................................................ 20 3 9 0.44 4 4 0 0 0 0
...................................................................................................................................................................................................AGGTCACTCGGCGGAAGC..................................... 18 2 7 0.43 3 2 0 1 0 0
................................................................................................................................................................AGCCTGACATGATGAGA......................................................................... 17 2 5 0.20 1 0 0 0 1 0
.....................................................TTGAGCGACCGAGTC...................................................................................................................................................................................... 15 1 11 0.09 1 0 0 0 0 1
..................................................................................................CAGGCAGCGAGCTGGCTGA..................................................................................................................................... 19 3 11 0.09 1 1 0 0 0 0
....................................................................................................GGCGGCGAGCTACCT....................................................................................................................................... 15 1 12 0.08 1 0 0 1 0 0
...........................TCCTTAGGCGGTCCCCA.............................................................................................................................................................................................................. 17 2 15 0.07 1 0 1 0 0 0
............................................................................................................................CCGCGCGCTGGAGGTT.............................................................................................................. 16 2 17 0.06 1 0 1 0 0 0
......TCATTGAAATAGTGCG.................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:18607554-18607803 - dsi_16104 GCTTAGAGAAA-------------CTTTATCAGGC--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCTC------------AGCAGG-----------AAAGT----TGCCGAGCATTTAATAGCGGACTCCGCCGCTCGAT-----CGACTTTCAGTCGGCGCGCGATCTCCACT------CTAACCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCCGTTGCCTT------GTCCTTGCAGTGCGCCGCCTTCGTGGACGGAGC---CT------------------CCATCACCTAT---GGAACCGGAAACGA
droSec2 scaffold_19:950760-951009 - dse_944 GCTTAGAGAAA-------------CTTTATCAGGC--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCTC------------AGCAGG-----------AAAGT----TGCCGAGCATTTAATAGCGGACTCCGCCGCTCGAT-----CGACTTTCAGTCGGCGCGCGATCTCCACT------CTAACCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCCGGTGCCTT------GTCCTTGCAGTGCGCCGCCTTCGTGGACGGAGC---CT------------------CCATCACCTAT---GGAACCGGAAACGC
dm3 chr3L:18985776-18986025 - GCTTAGAGAAA-------------CTTTATCAGGC--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCTC------------AGCAGG-----------AAAGT----TGCCGAGCATTTAATAGCGGACTCCGCCGCTCGAT-----CGACTTTCAGTCGGCGCGCGATCTCCACT------CTAACCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCCGTTGCCTT------GTCCTTGCAGTGTGCCGCCTTCGTGGACGGAGC---CT------------------CCATCACCTAT---GGAACCGGAAACGA
droEre2 scaffold_4784:18804580-18804829 - GCTTAGAGAAA-------------CTTTATCAGGC--AGAAGCG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCTC------------AGCAGG-----------AAAGT----TGCCGTGCATTTAATAGCAGACATCGCCGCTCGAT-----CGACTTTCAGTCGGCGCGCGATCGCCACT------CTAACCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCCGTTGCCTT------GTCCTTGCAGTGCGCCGCCTTCGTGGACGGAGC---CT------------------CCATCACCTAT---GGAACCGGAAACGA
droYak3 3L:21615384-21615633 + GCTTAGAGAAA-------------CTTTATCAGGC--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCGC------------AGCAGG-----------AAAGT----CGCCGTGCATTTAATAGCGGACTTCGCCGCTCGAT-----CGACTTTCAGTCGGCGCGCGATCGCCACT------CTAAACCGATGGCCATGTGTCGGAC---TGTACTAA---TCCTAGCCGTTGCCTT------GTCCTTGCAGTGCGCCGCCTTCGTGGACGGAGC---CT------------------CCATTACCTAT---GGAACCGGAAACGA
droEug1 scf7180000409471:496462-496711 + GCCTAGAGAAA-------------CTTTATCAGTG--AGAAATG------------------AAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCAC------------AGCAGG-----------AAAGT----TGCCGAGTATTTAATAGCGGACTTCGCCGACCGAT-----CGACTTTCAGTCGGCGTCCGTTCTTCATT------CCAAACCGTTGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCTATTGCCTT------GTCCTTGCAGTGTGCCGCGTACGTGGACGGAGC---CT------------------CTCTCACCTAT---GGAACCGGAAACGA
droBia1 scf7180000302529:508651-508898 + GCCTAGAGAAA-------------CTTTATCAGGG--AGAAACG------------------GAATCCGCAAGGGGTCATC---ACTAATCTCGC-CCGCAC------------AGCAGG-----------AAAGT----TG-CGACTACTTAATAGCGGGCTCCGCCGCTCGAT-----CGACTTTCAGTCGGCGTCGGTTCTCCATT------CCAAGCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCTGTTGCCTT------GTCCTTGCAGTGTGCCGCCTTCGTGGACGGAGC---CT------------------CGATCTCCTAT---GGAACCGGAAACGA
droTak1 scf7180000415184:30343-30592 + GCCTAGAGAAA-------------CTTTATCAGGG--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCCC------------AGCAGG-----------AAAGT----TGCCGACTACTTAATAGCGGGCTTCGCCGCGCGAT-----CGACTTTCAGTCGGCCTCCGATCTCCATT------CCAAGCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCCGTTGCCTT------GTCCTTGCAGTGTGCCGCCTACGTGGACGGAGC---CT------------------CCCTCACCTAT---GGAACCGGAAACGA
droEle1 scf7180000491249:6264758-6265010 - GCCTAGAGAAA-------------CTTTATCAGGG--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCGCGC-G--CTCGAACAGCCGAACAGCATGAAACGGCATGAAAAGT----AGTAGCGTATTTAA------------------GCG-----CGACTTTCAGTCGACGGCCGTTCCCCAAC------CAATTCATACAGCCATGTCTCGGAC---TGTACTAA---TCCTGTTCGTTGCCTT------GTCCTTGCAGTGTGCCGCCCTTGTGGATGGGGG---CT------------------CAATCAACTAT---GGAACCGGAAACGA
droRho1 scf7180000761233:59650-59899 - GCCTAGAGAAA-------------CTTTATCAGGG--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCGCGC-TCGAAC------------AGCAGA-----------AAAGT----TGCCATGTATTTAATAGCGGACTCCACCACTCGAG-----TGACTTTCAGTCGGCTTTCGTTCTCCATT------CCAAACCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCTGTTGCCTT------GTCCTTGCAGTGTGCCGCCCTAGTGGATGGAGC---CT------------------CCATCAACTAT---GGAACCGGAAACGA
droFic1 scf7180000453824:348348-348596 - GCCTAGAGAAA-------------CTTTATCAGGG--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCGC------------AGCAGG-----------AAAGC-----GTCGCGTATTTAATACCGGACCTCGTCGCTCGAG-----CGACTTTCAGTCGGCGGCCGAGCTCCACT------CCAAGCCGATGGCCATGTCGCGGAC---TGTACTAA---TCCTGGCTCTTGCCTT------GTCCTTGCAGTGCGCCGCCTACGTGGACGGAGC---CT------------------CGATCACCTAT---GGAACCGGAAACGA
droKik1 scf7180000302251:33570-33845 - ---TAGAGAAA-------------CTTTATCAGGG--CGAAACCGAATACGAATCCAAATCCGAATCCGCAAGGGGTCAGCGAGATTAGTCGCG-------C------------AGCAGG-----------GAAGTCTACGCGAGTCTATTTATTAACGATCAGCTCCGGCAGCG-----GGGCTTTCAGTCGGTGTCTGGCCTCCACTGCAGAACCAA-GCCAGGGCCATGTCTCGGAC---TGTACTAATATTCCTGGCTGTTGCCTT---GTTGTCCTTGCAGTGTGCCGCCTTCGCGGATGGAGC---CG------------------CCCTCGTCTAT---GGAACGGGTAATGA
droAna3 scaffold_13337:18455058-18455288 + dan_2712 G----GAGAAA-------------CTTTATCAGGG--CGTAACC------------------AAATCCGCAAGGGGTCATCG--CTTAATCTCGGCTGG---------------------------------------------GTCTATTTAATAGCCGGCTAGGTTGCCACAG-----AGGCGCTCAGTCGGTTTCTGCCCTCCAAT------C----GGGATGGCCATGTTGCGGACAAATTTACTAA---TCCTGGCCATGGCCT---GGTTGTTCTTGCAGTGTACCGCCTACGTGGATGGATC---CG------------------CCATATCCTAT---GGCACAGGCAATGA
droBip1 scf7180000396741:1637994-1638224 + G----GAGAAA-------------CTTTATCAGGG--CGTAACC------------------AAATCCGCAAGGGGTCATCG--TTTAATCTCGA-CTG--------------------------------------------CGTCTATTTAATAGCTGGCTAGGGTGCCGCAT-----CGGCGCTCAGTCGGTTTCTGCCCTCCAAT------C----GGGATGGCCATGTTGCGGACAAATTTACTAA---TCCTGGCCGTGGCCT---GGTTGTTCTTGCAGTGTGCCGCCTACGTGGATGGATC---CG------------------CCATATCCTAT---GGCACAGGCAATGA
dp5 XR_group8:7061441-7061712 - dps_3346 GCTTAGTGAAA-------------CTTTATCAGGGCGCGAAACG------------------AAATCCGCAAGGGGTCAACG--TTTAATCTCGG-C---TC------------CG--AG-----------ACAGTG---TGGGTTGGGTTTATTAAACGAGACCGCTGGCAGCG-----GTGCCCTCAGTCGTAGTCTAGTCTCCATT------GCTGAGCGATGGCCCTGTGGCACACCACCGTACTAA---TCCTGGCCTATGCCT---CCATCTCCTTGCAGTGCGCCGCATACGTGGAGGCAGC---CACCGTGCCACCGGGCGCCCTCATCAAGTAT---GGAACGGCCAATGA
droPer2 scaffold_36:245048-245319 + GCTTAGTGAAA-------------CTTTATCAGGGCGCGAAACG------------------AAATCCGCAAGGGGTCAACG--TTTAATCTCGG-C---TC------------CG--AG-----------ACAGTG---TGGGTTGGGTTTATTAAACGAGACCGCTGGCAGCG-----GTGCCCTCAGTCGTAGTCTAGTCTCCATT------GCTGAGCGATGGCCCTGTGGCACACCACCGTACTAA---TCCTGGCCTATGCCT---CCATCTCCTTGCAGTGCGCCGCATACGTGGAGGCCGC---CACCGTGCCACCGGGCGCCCTCATCAAGTAT---GGAACGGCCAATGA
droWil2 scf2_1100000004762:3329479-3329702 + GCCTAAAGACAGGCTAAGCGTCTCTCTTATCAGGG--TGAAATG------------------AAATCCGCAAGGGGTCAATG--TTTAATCTCTA-T-------------------CTAG-----------TCTAT----CGGGGTATATATATTAGATGAGATTTCTTTGGACA-----TTGCATTCAGTTGAAATC--------------------------TGACCATGTCTGGCTC---TATACTAA---TCCTTGGCTTTGCCTT------A---TTACAGTGTGCAGCA---------GCTGC---TA------------------CCCTCAATTAT---GGAACTGGCAATGA
droVir3 scaffold_13049:13442743-13442858 + G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATGCTGGGTTC---CCTATTAA---TCCTTGGCATTGTCGTCCCATCTGTCTTGCAGTGTGCTTCGTATGCGGATGCTGCGGCT-----GCTATCG--CTG--CCTCAAACTAT---GCTACTGGCAACGA
droMoj3 scaffold_6680:13898947-13899108 - CC-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGTCTGATGCTTTTGGCATTCAGTTTCTGCGCG-----CATT------TCATAGTTGTCGCCATGCTCGCCAT---TTCACTAA---TCCTTGGCCTTGTCGTCTCATCTGTTTTACAGTGCGCCGATGCTGCA---GCAGC---CA--------TCA--CTG--CCAACAACTATGGCGGCACGGGCAACGA
droGri2 scaffold_15110:18880141-18880191 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCAGTGTGCCGCATTTGTGGATGCAGC---C------------------------AGTTTT---GGCACTGGCAATGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCTTAGAGAAA-------------CTTTATCAGGC--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCTC------------AGCAGG-----------AAAGT----TGCCGAGCATTTAATAGCGGACTCCGCCGCTCGAT-----CGACTTTCAGTCGGCGCGCGATCTCCACT------CTAACCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCCGTTGCCTT------GTCCTTGCAGTGCGCCGCCTTCGTGGACGGAGC---CT------------------CCATCACCTAT---GGAACCGGAAACGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................TGGCCATGTCTCGGAC---TG...................................................................................................................1814.00440000000000000000
...........................................................................................................................................................................................................................CCCGATGGCCATGTCTCGGAC---TG...................................................................................................................2314.00440000000000000000
..........................................................................................................................................................................................................................ACCCGATGGCCATGTCTCGGAC---TG...................................................................................................................2414.00431000000000000000
.........................................................................................................................................................................................................................AACCCGATGGCCATGTCTCGGAC---TG...................................................................................................................2513.00330000000000000000
........................................................................................................................................................................................................................................TCTCGGAC---TGTACTAA---TCCTGGCC..................................................................................................2412.00220000000000000000
...................................................................................................................................................................................................GCGCGATCTCCACT------CTAACCC..........................................................................................................................................2112.00210100000000000000
.......................................................................................................................................................................................................................CTAACCCGATGGCCATGTCTCGGAC---TG...................................................................................................................2712.00210100000000000000
.......................................................................................................................................................................................................................................................................................................TTCGTGGACGGAGC---CT------------------CCATC.......................2111.00100000000001000000
..................................................................................................................................................GCATTTAATAGCGGACTCCG..................................................................................................................................................................................................2011.00110000000000000000
..........................................................................................................................................................................................................................ACCCGATGGCCATGTCTCGGAC---TGTA.................................................................................................................2611.00110000000000000000
...........................................................................................................................................................................................................................................CGGAC---TGTACTAA---TCCTGGCC..................................................................................................2111.00101000000000000000
........................................................................................................................................................................................................................................................................................................................CT------------------CCATCACCTAT---GGAACCGGAAAC..2511.00100010000000000000
.....................................................................................................................................................................................................................................ATGTCTCGGAC---TGTACTAA---TCCT......................................................................................................2311.00110000000000000000
...................................................................................................................................................................................................................................................................GCCGTTGCCTT------GTCCTTGCAG..........................................................................2111.00100001000000000000
..............................................................................................................................................................................................................................GATGGCCATGTCTCGGAC---T....................................................................................................................1911.00100100000000000000
......................................................................................................................................................................................................................................TGTCTCGGAC---TGTACTAA---TCCTGGC...................................................................................................2511.00110000000000000000
..........................................................................................................................................................................................................................................TCGGAC---TGTACTAA---TCCTGGCC..................................................................................................2211.00110000000000000000
.............................................................................................................................................................................................................CACT------CTAACCCGATGGCCA..................................................................................................................................1911.00110000000000000000
.........................................................................................................................................................................................................................................................................................................CGTGGACGGAGC---CT------------------CCATC.......................1911.00100100000000000000
........................................................................................................................................................................................................................TAACCCGATGGCCATGTCTCGGAC---TG...................................................................................................................2611.00110000000000000000
.....................................................................................................................................................................................GACTTTCAGTCGGCGCGCGATCTCCACT------.................................................................................................................................................2811.00101000000000000000
..............................................................................ATCG--ACTAATCTCGC-TGGCTC------------......................................................................................................................................................................................................................................................2111.00101000000000000000
......................................................................................................................................................................................................................................TGTCTCGGAC---TGTACTAA---TCCTGGCCG.................................................................................................2711.00101000000000000000
.............................................................................................................................................................................................GTCGGCGCGCGATCTCCACT------CTAACC...........................................................................................................................................2611.00110000000000000000
..................................................................................................................................................................................................................................................................................................CCGCCTTCGTGGACG.......................................................1511.00100000000001000000
.............................................................................................................................................................................................................................CGATGGCCATGTCTCGGAC---TGTACG...............................................................................................................2511.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................ATCACCTAT---GGAACCGGAAAC..2111.00100010000000000000
......................................................................................................................................................................................................................................TGTCTCGGAC---TGTACTAA---TCCTGGCC..................................................................................................2611.00101000000000000000
..........................................................................................................................................................................................................................................TCGGAC---TGTACTAA---TCCT......................................................................................................1811.00110000000000000000
........................................................................................................................................................................................................................................................................................................................CT------------------CCATCACCTAT---GGAACCGGAAA...2411.00100010000000000000
........................................................................................................................................................................................................................TAACCCGATGGCCATGTCTCGGAC---TGTA.................................................................................................................2811.00101000000000000000
...........................................................................................................................................................................................................................CCCGATGGCCATGTCTCGGAC---.....................................................................................................................2111.00110000000000000000
..........................................................................................................................................................................................................................................................................................GCAGTGCGCCGCCTTCGTG...........................................................1911.00100001000000000000
..................................................................................................................................................................................................CGCGCGATCTCCACT------CTAACCC..........................................................................................................................................2211.00110000000000000000
............................................................................................................................................................................GAT-----CGACTTTCAGTCGGCG....................................................................................................................................................................1911.00100000100000000000
droSec2
GCTTAGAGAAA-------------CTTTATCAGGC--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCTC------------AGCAGG-----------AAAGT----TGCCGAGCATTTAATAGCGGACTCCGCCGCTCGAT-----CGACTTTCAGTCGGCGCGCGATCTCCACT------CTAACCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCCGGTGCCTT------GTCCTTGCAGTGCGCCGCCTTCGTGGACGGAGC---CT------------------CCATCACCTAT---GGAACCGGAAACGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................GCCTTCGTGGACGGAGC---CT------------------CC..........................2112.0020101
............................................................................................................................................................................................................................................................................................................................................CCATCACCTAT---GGAACCGGA.....2012.0022000
................................................................................................................................................................................................................................TGGCCATGTCTCGGAC---TG...................................................................................................................1811.0011000
...........................................................................................................................................................................................................TCCACT------CTAACCCGATGGCCA..................................................................................................................................2111.0011000
....................................................................................................................................................................................................CGCGATCTCCACT------CTAACCCGATGG.....................................................................................................................................2511.0011000
........................................................................................................................................................................................................................................................................................................TCGTGGACGGAGC---CT------------------CCATCACC....................2311.0010010
.......................................................................................................................................................................CGCTCGAT-----CGACTTTCAGTCGGCGCG..................................................................................................................................................................2611.0011000
..............................................................................................................................................................................................................................................................................................TGCGCCGCCTTCGTGGACGGAGC---................................................2311.0010010
.........................................................................................................................................................................................................................................................................GCCTT------GTCCTTGCAGTGCGCCGCC.................................................................2411.0010001
.....................................................................................................................................................................................................................................ATGTCTCGGAC---TGTACTAA---TCC.......................................................................................................2211.0010100
.................................................................................................................................................................................................................................GGCCATGTCTCGGAC---TGTA.................................................................................................................1911.0011000
................................................................................................................................................................................................................................TGGCCATGTCTCGGAC---TGTA.................................................................................................................2011.0011000
................................................................................................................................................................................................................................TGGCCATGTCTCGGAC---TGT..................................................................................................................1911.0010010
..............................................................................................................................................................................................................................................................................................................................................ATCACCTAT---GGAACCGGAAA...2011.0010100
...........................................................................................................................................................................................................................................................................................CAGTGCGCCGCCTTCGTGG..........................................................1911.0010001
..................................................................................................................................................................................................................................GCCATGTCTCGGAC---TGTA.................................................................................................................1811.0010010
....................................................................................................................................................................................................................................................................................................GCCTTCGTGGACGGAGC---CT------------------C...........................2011.0011000
..................................................................................................................................................................................................................................................................................................................................................CCTAT---GGAACCGGAAACG.1811.0010010
....................................................................................................................................................................................................................................................................................................GCCTTCGTGGACGGAGC---CT------------------............................1911.0010001
.............................................................................................................................................................................................................................................................................................................................................CATCACCTAT---GGAACCGGAAAC..2211.0010001
.............................................................................................................................................................................................................................................................................................................................................CATCACCTAT---GGAACCGGAAACGC2411.0010010
..............................................................................................................................................................................................................................................................................................TGCGCCGCCTTCGTGGACG.......................................................1911.0010001
.........................................................................................................................................................................................................................AACCCGATGGCCATGTCTCGGAC---TGT..................................................................................................................2611.0010010
........................................................................................................................................................................................................................................................................................................................CT------------------CCATCACCTAT---GGAACCGGAAACGC2711.0010100
..............................................................................................................................................................................................................................................................................................TGCGCCGCCTTCGTGGACGGA.....................................................2111.0010010
............................................................................................................................................................................................................................................................................................AGTGCGCCGCCTTCGTGGACGGAGC---C...............................................2611.0010001
...........................................................................................................................................................................................................................................................................CTT------GTCCTTGCAGTGCGCCG...................................................................2011.0010001
........................................................................................................................................................................................................................................................................................................TCGTGGACGGAGC---CT------------------CCATCACCTAT---GG............2811.0010100
...........................................................................................................................................................................................................................................................................................CAGTGCGCCGCCTTCGTG...........................................................1811.0010001
..............................................................................................................................................................................................................................GATGGCCATGTCTCGGAC---TGTACTA..............................................................................................................2511.0010100
dm3
GCTTAGAGAAA-------------CTTTATCAGGC--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCTC------------AGCAGG-----------AAAGT----TGCCGAGCATTTAATAGCGGACTCCGCCGCTCGAT-----CGACTTTCAGTCGGCGCGCGATCTCCACT------CTAACCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCCGTTGCCTT------GTCCTTGCAGTGTGCCGCCTTCGTGGACGGAGC---CT------------------CCATCACCTAT---GGAACCGGAAACGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................AAACG------------------GAATCCGCAAGGGGT...........................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTCGTGGACGGAGC---CT------------------CCATCACC....................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000300000000
.....................................................................................................................................................................................GACTTTCAGTCGGCGCGCG................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CCTTCGTGGACGGAGC---CT------------------CCATC.......................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................ATCACCTAT---GGAACCGGAAA...2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GCCGCCTTCGTGGACGGAGC---CT------------------CC..........................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TGGCCATGTCTCGGAC---TG...................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CGATGGCCATGTCTCGGAC---TGT..................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TCACCTAT---GGAACCGGAAA...1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CGTGGACGGAGC---CT------------------CCATCACCTAT---GG............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
.............................................................................................................................................................................................................................................................................................................................................CATCACCTAT---GGAACCGGAAA...2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTCGTGGACGGAGC---CT------------------CCATCA......................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GCCTTCGTGGACGGAGC---CT------------------CC..........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CACCTAT---GGAACCGGAAA...1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GCCGCCTTCGTGGACGGAGC---CT------------------CCATC.......................2712.0020000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ACCCGATGGCCATGTCTCG...........................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................C-TGGCTC------------AGCAGG-----------AAAGT----............................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AGAAACG------------------GAATCCGCAAGGGGTC..........................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................G--ACTAATCTCGC-TGGCTC------------AGCAGG-----------AAAG.................................................................................................................................................................................................................................2812.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GCCTTCGTGGACGGAGC---CT------------------CCATC.......................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
................................................................................................................................................................................................................................................................................................................GGAGC---CT------------------CCATCACCTAT---..............1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACG------------------GAATCCGCAAGGGGTC..........................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TGGACGGAGC---CT------------------CCATCACCATC---..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GGACGGAGC---CT------------------CCATCACCTA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TGGCCATGTCTCGGAC---TGTACTA..............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTC------------AGCAGG-----------AAAGT----TGCCGAGCAT..................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGC--AGAAACG------------------GAATCCGCAAGGGGC...........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TGGACGGAGC---CT------------------CCATCACCTA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TGCCGCCTTCGTGGACGGAGC---CT------------------CC..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GC---CT------------------CCATCACCTAT---GGAACCGGAAACGA2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CTTCGTGGACGGAGC---CT------------------CCATC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................GCATTTAATAGCGGACTCCG..................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TCCACT------CTAACCCGATGG.....................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GCCGCCTTCGTGGACGGAG....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GAC---TGTACTAA---TCCTGGCCGTTG..............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................TGGACGGAGC---CT------------------CCATCA......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TGCAGTGTGCCGCCTTCGTGGACGGAGC---................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GC---CT------------------CCATCACCTAT---GGAACCGGA.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GTGCCGCCTTCGTGGACGGAGC---................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................ACCCGATGGCCATGTCTCGGAC---TGT..................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GCCTT------GTCCTTGCAGTGTGCCGCC.................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CGGAGC---CT------------------CCATCACCTAT---GGAA..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GACTTTCAGTCGGCGCGCGA...............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TGTGCCGCCTTCGTGGACGGAGC---................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CATCACCTAT---GGAACCGGA.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGGC--AGAAACG------------------GAATCCGCAAGGGG............................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CGCCTTCGTGGACGGAGC---C...............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACG------------------GAATCCGCAAGGGGT...........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................ATCAGGC--AGAAACG------------------GAATCCGC..................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................AACG------------------GAATCCGCAAGGGGT...........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AC---TGTACTAA---TCCTGGCCG.................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AAACG------------------GAATCCGCAAGGGGTC..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AGTGTGCCGCCTTCGTGGACGGA.....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTGCCTT------GTCCTTGCAGTGT.......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CCATCACCTAT---GGAACCG.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TTGCAGTGTGCCGCCTTCGTGGACGGAGC---................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TCGTGGACGGAGC---CT------------------CCA.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GC---CT------------------CCATCACCTAT---GGAACC........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CGGAGC---CT------------------CCATCACCTAT---GG............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GCCGCCTTCGTGGACGGAGC---CT------------------CAT.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AC---TGTACTAA---TCCTGGCCGTTG..............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................ACTAATCTCGC-TGGCTC------------AGCA..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................GGCCATGTCTCGGAC---TGTACT...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TGCAGTGTGCCGCCTTCGTGGACGGAG....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................CACCTAT---GGAACCGGAAAC..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TGGCCGTTGCCTT------GTCCTTGC............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ACTTTCAGTCGGCGCGCG................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................C---TGTACTAA---TCCTGGCCGTTGCCTT------....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................C-TGGCTC------------AGCAGG-----------AAAGT----TGCCG.......................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................................................................................................................................................................................................................................................................................................................GAGC---CT------------------CCATCACCTAT---GGAAC.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GTCCTTGCAGTGTGCCGCC.................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTCGTGGACGGAGC---CT------------------CCATC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AGTGTGCCGCCTTCGTGGACGGAGC---CT------------------............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AGAAACG------------------GAATCCGCAAGGGGT...........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TCGTGGACGGAGC---CT------------------CCATCACC....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................TGCCGCCTTCGTGGACGGAGC---CT------------------CCATC.......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TGGCCATGTCTCGGAC---TGTACT...............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................ATCACCTAT---GGAACCGGAG....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................T------------------CCATCACCTAT---GGAACCGGAAAC..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CT------------------CCATCACCTAT---GGAACCGGA.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GC---CT------------------CCATCACCTAT---GGAA..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................GATGGCCATGTCTCGGAC---TGTACTA..............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CCTAT---GGAACCGGAAACGA1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GCCGTTGCCTT------GTCCTTGCAGTG........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTCGTGGACGGAGC---CT------------------CCA.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................................................................................................................................................................................................................................................................................CGCCTTCGTGGACGGAGC---CT------------------............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................T------------------CCATCACCTAT---GGAACCGGAAACGA2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CCGCCTTCGTGGACGGAGC---CT------------------CCATC.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AGTGTGCCGCCTTCGTGGACGGAGC---................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CATCACCTAT---GGAACCGGAAACGA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CGTGGACGGAGC---CT------------------CCATCAC.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CAGTCGGCGCGCGATCTCCA.........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TACTAA---TCCTGGCCGTTGCC............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........AAA-------------CTTTATCAGGC--AGAACTC------------------..........................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CACCTAT---GGAACCGGATC...1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCTTAGAGAAA-------------CTTTATCAGGC--AGAAGCG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCTC------------AGCAGG-----------AAAGT----TGCCGTGCATTTAATAGCAGACATCGCCGCTCGAT-----CGACTTTCAGTCGGCGCGCGATCGCCACT------CTAACCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCCGTTGCCTT------GTCCTTGCAGTGCGCCGCCTTCGTGGACGGAGC---CT------------------CCATCACCTAT---GGAACCGGAAACGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................TCGTGGACGGAGC---CT------------------CCA.........................1811.0011000000
...............................................................................................................................................................................................................................................................................................GCGCCGCCTTCGTGGACGGA.....................................................2011.0011000000
....................................................................................................................................................................................................................................................................................................GCCTTCGTGGACGGAGC---CT------------------CCATCACCT...................2811.0010000100
...................................................................................................................................................................................................GCGCGATCGCCACT------CTAACC...........................................................................................................................................2011.0010000010
...............................................................................................................................................................................................................................................................................................GCGCCGCCTTCGTGGACGGAGC---CT------------------CC..........................2611.0011000000
..............................................................................................................................................................................................................................................................................................TGCGCCGCCTTCGTGGAC........................................................1811.0010000100
..................................................................................................................................................................................................................................................................................................CCGCCTTCGTGGACGGAGC---CT------------------CC..........................2311.0010000100
...................................................................................................................................................................................................................................................................................................CGCCTTCGTGGACGGAGC---CT------------------CA..........................2211.0010001000
.........................................................................................................................................................................................................................................................AA---TCCTGGCCGTTGCCTT------GTC.................................................................................2111.0011000000
......................................................................................................................................................................................................................................................................................CCTTGCAGTGCGCCGCCTTCGTGGA.........................................................2511.0010000010
..............................................................................................................................................................................................................................................................................................................................................ATCACCTAT---GGAACCGGAAACG.2211.0010000100
..............................................................................................................................................................................................................................................................................................................................................ATCACCTAT---GGAACCGGAAA...2011.0010000100
...............................................................................................................................................................................................................................................................................................................CGGAGC---CT------------------CCATCACCTAT---GGAACC........2511.0010000100
.........................................................................................................................................................................................................................AACCCGATGGCCATGTCTCG...........................................................................................................................2011.0010000010
......................................................................................................................................................................................................................................TGTCTCGGAC---TGTACTAA---TCCTGGCC..................................................................................................2611.0010010000
...................................................................................................................................................................................................................................................................................................CGCCTTCGTGGACGGAGC---CT------------------CCATCA......................2611.0010000100
........................................................................................................................................................................................................................................................................TGCCTT------GTCCTTGCAGTGCGCCGC..................................................................2411.0010100000
.........................................................................................................................................................................................................................................................AA---TCCTGGCCGTTGCCTT------GTCC................................................................................2211.0011000000
.........................................................................................................................................................................................................TCGCCACT------CTAACCCGATGGCCATGTCTC............................................................................................................................2911.0011000000
......................................GAAGCG------------------GAATCCGCAAGGGGTC..........................................................................................................................................................................................................................................................................................2211.0010100000
...........................................................................................................................................................................................................................................................................CTT------GTCCTTGCAGTGCGCC....................................................................1911.0010000010
..............................................................................................................................................................................................................................GATGGCCATGTCTCGGAC---TGTACT...............................................................................................................2411.0010000010
.............................................................................................................................................................................................................................................................................................GTGCGCCGCCTTCGTGGACGGA.....................................................2211.0010000010
......................................................................................................................................................................................................................................................................................................CTTCGTGGACGGAGC---CT------------------CCATCACCT...................2611.0010000100
droYak3
GCTTAGAGAAA-------------CTTTATCAGGC--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCGC------------AGCAGG-----------AAAGT----CGCCGTGCATTTAATAGCGGACTTCGCCGCTCGAT-----CGACTTTCAGTCGGCGCGCGATCGCCACT------CTAAACCGATGGCCATGTGTCGGAC---TGTACTAA---TCCTAGCCGTTGCCTT------GTCCTTGCAGTGCGCCGCCTTCGTGGACGGAGC---CT------------------CCATTACCTAT---GGAACCGGAAACGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................AGTGCGCCGCCTTCGTGGACGGAGC---C...............................................2614.00400000010003
.......................................................................................................................................................................................................................................................................................................TTCGTGGACGGAGC---CT------------------CCATTACCT...................2512.00210010000000
................................................................................................................................................................................................................T------CTAAACCGATGGCCATGTGTCGGA.........................................................................................................................2511.00100000010000
..................................................................................................................................................................................................................................GCCATGTGTCGGAC---TGTACTAA---TCCTA.....................................................................................................2711.00100001000000
......................................................................................................................................................................................................................................................................................................CTTCGTGGACGGAGC---CT------------------CCATTACCTAT---G.............2911.00100000010000
..............................................................................................................................................................................................................................................................................................TGCGCCGCCTTCGTGGAC........................................................1811.00101000000000
........................................................................................................................................................................................................................................................................................................TCGTGGACGGAGC---CT------------------CCATTACCT...................2411.00100000010000
.........................................................................................................................................................................................TTCAGTCGGCGCGCGATCGCCA.........................................................................................................................................................2211.00100000010000
...........................................................................................................................................................................................................................ACCGATGGCCATGTGTCGGAC---T....................................................................................................................2211.00110000000000
.........................................................................................................................................................................................TTCAGTCGGCGCGCGATCGC...........................................................................................................................................................2011.00110000000000
..............................................................................ATCG--ACTAATCTCGC-TGGCGC------------......................................................................................................................................................................................................................................................2111.00100010000000
.......................................................................................................................................................................................................................................................................................................TTCGTGGACGGAGC---CT------------------CCATTACCTAT---G.............2811.00101000000000
................................................................................................................................................................................................................................TGGCCATGTGTCGGAC---TG...................................................................................................................1811.00101000000000
.........................................................................................................................................................................................................................................................................GCCTT------GTCCTTGCAGTGCGCCGC..................................................................2311.00101000000000
........................................................................................................................................................................................................................................................................................................................CT------------------CCATTACCTAT---GGAACCGGAAA...2411.00100000100000
.............................................................................................................................................................................................................................................................................................GTGCGCCGCCTTCGTGGACGGAGC---CT------------------............................2611.00100100000000
.....................................................................................................................................................................................................................................................................................................CCTTCGTGGACGGAGC---CT------------------CCATTACC....................2611.00110000000000
.....GAGAAA-------------CTTTATCAGGC--AGAAACG------------------GA........................................................................................................................................................................................................................................................................................................2611.00100000010000
..........................................................................................CTCGC-TGGCGC------------AGCAGG-----------AAAGT----CGCCGTGC....................................................................................................................................................................................................................3011.00100000010000
.....................................................................................................................................................................................................................................................TACTAA---TCCTAGCCGTTGCCT...........................................................................................2111.00101000000000
.................................................................................................................................................................................................................................................................................................GCCGCCTTCGTGGACGGAGC---CT------------------CC..........................2411.00100100000000
droEug1
GCCTAGAGAAA-------------CTTTATCAGTG--AGAAATG------------------AAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCAC------------AGCAGG-----------AAAGT----TGCCGAGTATTTAATAGCGGACTTCGCCGACCGAT-----CGACTTTCAGTCGGCGTCCGTTCTTCATT------CCAAACCGTTGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCTATTGCCTT------GTCCTTGCAGTGTGCCGCGTACGTGGACGGAGC---CT------------------CTCTCACCTAT---GGAACCGGAAACGASizeHit CountTotal NormTotal
No Reads
droBia1
GCCTAGAGAAA-------------CTTTATCAGGG--AGAAACG------------------GAATCCGCAAGGGGTCATC---ACTAATCTCGC-CCGCAC------------AGCAGG-----------AAAGT----TG-CGACTACTTAATAGCGGGCTCCGCCGCTCGAT-----CGACTTTCAGTCGGCGTCGGTTCTCCATT------CCAAGCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCTGTTGCCTT------GTCCTTGCAGTGTGCCGCCTTCGTGGACGGAGC---CT------------------CGATCTCCTAT---GGAACCGGAAACGASizeHit CountTotal NormTotal
No Reads
droTak1
GCCTAGAGAAA-------------CTTTATCAGGG--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCCC------------AGCAGG-----------AAAGT----TGCCGACTACTTAATAGCGGGCTTCGCCGCGCGAT-----CGACTTTCAGTCGGCCTCCGATCTCCATT------CCAAGCCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCCGTTGCCTT------GTCCTTGCAGTGTGCCGCCTACGTGGACGGAGC---CT------------------CCCTCACCTAT---GGAACCGGAAACGASizeHit CountTotal NormTotal
No Reads
droEle1
GCCTAGAGAAA-------------CTTTATCAGGG--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCGCGC-G--CTCGAACAGCCGAACAGCATGAAACGGCATGAAAAGT----AGTAGCGTATTTAA------------------GCG-----CGACTTTCAGTCGACGGCCGTTCCCCAAC------CAATTCATACAGCCATGTCTCGGAC---TGTACTAA---TCCTGTTCGTTGCCTT------GTCCTTGCAGTGTGCCGCCCTTGTGGATGGGGG---CT------------------CAATCAACTAT---GGAACCGGAAACGASizeHit CountTotal NormTotal
No Reads
droRho1
GCCTAGAGAAA-------------CTTTATCAGGG--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCGCGC-TCGAAC------------AGCAGA-----------AAAGT----TGCCATGTATTTAATAGCGGACTCCACCACTCGAG-----TGACTTTCAGTCGGCTTTCGTTCTCCATT------CCAAACCGATGGCCATGTCTCGGAC---TGTACTAA---TCCTGGCTGTTGCCTT------GTCCTTGCAGTGTGCCGCCCTAGTGGATGGAGC---CT------------------CCATCAACTAT---GGAACCGGAAACGASizeHit CountTotal NormTotal
No Reads
droFic1
GCCTAGAGAAA-------------CTTTATCAGGG--AGAAACG------------------GAATCCGCAAGGGGTCATCG--ACTAATCTCGC-TGGCGC------------AGCAGG-----------AAAGC-----GTCGCGTATTTAATACCGGACCTCGTCGCTCGAG-----CGACTTTCAGTCGGCGGCCGAGCTCCACT------CCAAGCCGATGGCCATGTCGCGGAC---TGTACTAA---TCCTGGCTCTTGCCTT------GTCCTTGCAGTGCGCCGCCTACGTGGACGGAGC---CT------------------CGATCACCTAT---GGAACCGGAAACGASizeHit CountTotal NormTotal
No Reads
droKik1
---TAGAGAAA-------------CTTTATCAGGG--CGAAACCGAATACGAATCCAAATCCGAATCCGCAAGGGGTCAGCGAGATTAGTCGCG-------C------------AGCAGG-----------GAAGTCTACGCGAGTCTATTTATTAACGATCAGCTCCGGCAGCG-----GGGCTTTCAGTCGGTGTCTGGCCTCCACTGCAGAACCAA-GCCAGGGCCATGTCTCGGAC---TGTACTAATATTCCTGGCTGTTGCCTT---GTTGTCCTTGCAGTGTGCCGCCTTCGCGGATGGAGC---CG------------------CCCTCGTCTAT---GGAACGGGTAATGASizeHit CountTotal NormTotal
No Reads
droAna3
G----GAGAAA-------------CTTTATCAGGG--CGTAACC------------------AAATCCGCAAGGGGTCATCG--CTTAATCTCGGCTGG---------------------------------------------GTCTATTTAATAGCCGGCTAGGTTGCCACAG-----AGGCGCTCAGTCGGTTTCTGCCCTCCAAT------C----GGGATGGCCATGTTGCGGACAAATTTACTAA---TCCTGGCCATGGCCT---GGTTGTTCTTGCAGTGTACCGCCTACGTGGATGGATC---CG------------------CCATATCCTAT---GGCACAGGCAATGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................TGGCCT---GGTTGTTCTTGCAGTGTA......................................................................2411.001100000
.......................................................................................................................................................................................CGCTCAGTCGGTTTCTGCCC.............................................................................................................................................................2011.001000001
................................................................................................................................................................................................................................................................................................................................................ATCCTAT---GGCACAGGCAAT..1911.001100000
...............................................................................................................................................................................................................AT------C----GGGATGGCCATGTTGC............................................................................................................................1911.001010000
.......................................................................................................................................................................................................GCCCTCCAAT------C----GGGATGGCCATGTTG.............................................................................................................................2611.001000001
................................................................................................................................................................................................GGTTTCTGCCCTCCAAT------C----GGGATGGC....................................................................................................................................2611.001000001
............................................................................................................................................................................................................................................................................................................GGATGGATC---CG------------------CCATATCCTAC---..............2211.001010000
.............................................................................................................................................................................................................................................................................................................GATGGATC---CG------------------CCATATCCTAT---GGCAC.........2611.001010000
.......................................................................................................................................................................................................GCCCTCCAAT------C----GGGATGGCCATGTTGC............................................................................................................................2711.001000001
..............................................................................................................................................................................................................................................................................................................................................ATATCCTAT---GGCACAGGCA....1911.001100000
..............................................................................................................................................................................................................AAT------C----GGGATGGCCATGTTGCGGACAA......................................................................................................................2611.001100000
..............................................................................................................................................................................................................................................................................................................................................ATATCCTAT---GGCACAGGCAATG.2211.001100000
.....................................................................................................................................................................................................................................................................CATGGCCT---GGTTGTTCTTGCA...........................................................................2111.001010000
.......................................................................................................................................................................................................................................................................................................TACGTGGATGGATC---CG------------------CCA.........................1911.001000100
....................................................................................................................................................................................AGGCGCTCAGTCGGTTTCTGCCCT............................................................................................................................................................2411.001100000
G----GAGAAA-------------CTTTATCAGGG--CGT................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................GTTTCTGCCCTCCAAT------C----GGGATGGC....................................................................................................................................2511.001010000
...............................................................................................................................................................................................................................................................................................GTACCGCCTACGTGGATGGAT....................................................2111.001100000
....................................................................................................................................................................................................................................................................................GTTCTTGCAGTGTACCGCCTACG.............................................................2311.001000001
................................................................................................................................................................................................................................TGGCCATGTTGCGGACAAATT...................................................................................................................2111.001100000
.....................................................................................................................................................................................................CTGCCCTCCAAT------C----GGGATGG.....................................................................................................................................2011.001000001
droBip1
G----GAGAAA-------------CTTTATCAGGG--CGTAACC------------------AAATCCGCAAGGGGTCATCG--TTTAATCTCGA-CTG--------------------------------------------CGTCTATTTAATAGCTGGCTAGGGTGCCGCAT-----CGGCGCTCAGTCGGTTTCTGCCCTCCAAT------C----GGGATGGCCATGTTGCGGACAAATTTACTAA---TCCTGGCCGTGGCCT---GGTTGTTCTTGCAGTGTGCCGCCTACGTGGATGGATC---CG------------------CCATATCCTAT---GGCACAGGCAATGASizeHit CountTotal NormTotal
No Reads
dp5
GCTTAGTGAAA-------------CTTTATCAGGGCGCGAAACG------------------AAATCCGCAAGGGGTCAACG--TTTAATCTCGG-C---TC------------CG--AG-----------ACAGTG---TGGGTTGGGTTTATTAAACGAGACCGCTGGCAGCG-----GTGCCCTCAGTCGTAGTCTAGTCTCCATT------GCTGAGCGATGGCCCTGTGGCACACCACCGTACTAA---TCCTGGCCTATGCCT---CCATCTCCTTGCAGTGCGCCGCATACGTGGAGGCAGC---CACCGTGCCACCGGGCGCCCTCATCAAGTAT---GGAACGGCCAATGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................T---CCATCTCCTTGCAGTGCGCC....................................................................2113.0030200001000
.................................................................................................................................................................................................................................................................................................................................................AAGTAT---GGAACGGCCAATG.1912.0020100001000
......................................................................................................................................................................................................................................TGTGGCACACCACCGTACTAA---..........................................................................................................2112.0020200000000
.......................................................................................................................................................................................................................GCTGAGCGATGGCCCTGTGGC............................................................................................................................2112.0020200000000
..........................................................................................................................................................................................................................................................................................................GTGGAGGCAGC---CACCGTGCCACCGGGC................................2711.0010100000000
..................................................................................................................................................................................................................................................................................ATCTCCTTGCAGTGCGCCGC..................................................................2011.0010000001000
.........................................................................................................................................................................................................................TGAGCGATGGCCCTGTGGC............................................................................................................................1911.0010100000000
.....................................................................................................................................................................................................................................CTGTGGCACACCACCGTA.................................................................................................................1811.0010100000000
...............................................................................................................................................................................................................................................................CCTGGCCTATGCCT---CCATCC..................................................................................2011.0010001000000
.................................................................................................................................................................................................................................................................TGGCCTATGCCT---CCATCTCCT...............................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................A---TCCTGGCCTATGCCT---CCAT....................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................TGCGCCGCATACGTGGAGGCAG....................................................2211.0010000010000
.........................................................................................................................................................................................................................TGAGCGATGGCCCTGTGGCACACCACC....................................................................................................................2711.0010001000000
.................................................................................................................................................................................................................................................................................CATCTCCTTGCAGTGCGCCGC..................................................................2111.0010100000000
...............................................................................................................................................................................................................................................CCACCGTACTAA---TCCTGGCCT.................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................GCGCCGCATACGTGGAGGCAG....................................................2111.0010100000000
.................................................................................................................................................................................................TAGTCTAGTCTCCATT------GCTGAG...........................................................................................................................................2211.0010100000000
.......................................................................................................................................................................................................................GCTGAGCGATGGCCCTGTGG.............................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................CTGGCCTATGCCT---CCATCTCCTTG.............................................................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................TGCGCCGCATACGTGGAGGCAGC---................................................2311.0010000001000
................................................................................................................................................................................................................................................................................................................GCAGC---CACCGTGCCACCGGGC................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................TCAAGTAT---GGAACGGCCAATGA2211.0010000001000
...............................................................................................................................................................................................................................................................CCTGGCCTATGCCT---CCATCTCCC...............................................................................2311.0010001000000
...........................................................................................................................................................................................................................AGCGATGGCCCTGTGGCACACCACC....................................................................................................................2511.0010100000000
droPer2
GCTTAGTGAAA-------------CTTTATCAGGGCGCGAAACG------------------AAATCCGCAAGGGGTCAACG--TTTAATCTCGG-C---TC------------CG--AG-----------ACAGTG---TGGGTTGGGTTTATTAAACGAGACCGCTGGCAGCG-----GTGCCCTCAGTCGTAGTCTAGTCTCCATT------GCTGAGCGATGGCCCTGTGGCACACCACCGTACTAA---TCCTGGCCTATGCCT---CCATCTCCTTGCAGTGCGCCGCATACGTGGAGGCCGC---CACCGTGCCACCGGGCGCCCTCATCAAGTAT---GGAACGGCCAATGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................CTCAGTCGTAGTCTAGTCT............................................................................................................................................................1911.001100000
.............................................................................................................................................................................................................................................................................................GTGCGCCGCATACGTGGAG........................................................1911.001001000
.............................................................................CAACG--TTTAATCTCGG-C---TC------------......................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................................................................GCTGAGCGATGGCCCTGTGGCACAC........................................................................................................................2511.001000010
.......................................................................................................................................................................................................................................................................ATGCCT---CCATCTCCTTGCAGTGCGCC....................................................................2611.001000010
droWil2
GCCTAAAGACAGGCTAAGCGTCTCTCTTATCAGGG--TGAAATG------------------AAATCCGCAAGGGGTCAATG--TTTAATCTCTA-T-------------------CTAG-----------TCTAT----CGGGGTATATATATTAGATGAGATTTCTTTGGACA-----TTGCATTCAGTTGAAATC--------------------------TGACCATGTCTGGCTC---TATACTAA---TCCTTGGCTTTGCCTT------A---TTACAGTGTGCAGCA---------GCTGC---TA------------------CCCTCAATTAT---GGAACTGGCAATGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................CTCAATTAT---GGAACTGGCAAT..2112.00200020
......................................................................................................................................................................................................................................................................................................A---------GCTGC---TA------------------CCCTCAATTAT---GGAACT........2512.00200020
.........................................................................................................................................................................................................................................................................................................................A------------------CCCTCAATTAT---GGAACTGGC.....2111.00100010
....................................................................................................................................................................TTCTTTGGACA-----TTGCATTCAGTTGAAA....................................................................................................................................................................2711.00100010
...............................................................................................................................................................................................................................................................................................................................................TCAATTAT---GGAACTGGCA....1811.00101000
...............................................................................................................................................................................................TGAAATC--------------------------TGACCATGTCTGGC..........................................................................................................................2111.00110000
......................................................................................................................................................................................................................................................................................................A---------GCTGC---TA------------------CCCTCAATTAT---GGAACTGG......2711.00100010
............................................................................................................................................................................................................................................................................................AGTGTGCAGCA---------GCTGC---TA------------------CC..........................2011.00100010
.............................................................................................................................................................................................................................................................................................................................................CCTCAATTAT---GGAACTGGCA....2011.00100010
...................................................................................................................................................................................................................................................................................................................GC---TA------------------CCCTCAATTAT---GGAACTGGCA....2511.00101000
..............................................................................................................................................................................................................................................................................................................................................CTCAATTAT---GGAACTGGC.....1811.00101000
........................................................................................................................................................................................................................................................................................................................TA------------------CCCTCAATTAT---GGAACTGGCAAT..2511.00100100
GCCTAAAGACAGGCTAAGCGTCTCTCTT............................................................................................................................................................................................................................................................................................................................................2811.00100010
........................................................................................................................................................................................................................................TCTGGCTC---TATACTAA---TCCTTGGCTC................................................................................................2611.00110000
.........................................................................................................................................................................................................................................................................................TACAGTGTGCAGCA---------GCTG....................................................1811.00100001
..............................................................................................................................................................................................................................................................................................................................................CTCAATTAT---GGAACTGGCA....1911.00100010
........................................................................................................................................................................................................................................................................TGCCTT------A---TTACAGTGTGCAGCA---------GCT.....................................................2511.00100001
....AAAGACAGGCTAAGCGTCTCTC..............................................................................................................................................................................................................................................................................................................................................2211.00100010
.................................................................................................................................................................................................................................................................................................................................................AATTAT---GGAACTGGCAAT..1811.00100010
...................................................................................................................................................................................................ATC--------------------------TGACCATGTCTGGCTC---TATACT...............................................................................................................2511.00110000
.................................................................................................................................................................................................................................................................................................................................................AATTAT---GGAACTGGCAATGA2011.00100010
............................................................................................................................................................................................................................................................................................................................................CCCTCAATTAT---GGAACTGGC.....2011.00100010
droVir3
G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATGCTGGGTTC---CCTATTAA---TCCTTGGCATTGTCGTCCCATCTGTCTTGCAGTGTGCTTCGTATGCGGATGCTGCGGCT-----GCTATCG--CTG--CCTCAAACTAT---GCTACTGGCAACGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................GCTTCGTATGCGGATGCTGC...................................................2016.006003000000000000001000000000000000000000000000000000000000002000
...................................................................................................................................................................................................................................................................................................TTCGTATGCGGATGCTGCGGC................................................2112.002002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................G--CCTCAAACTAT---GCTACTGGC.....2112.002002000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GCTTCGTATGCGGATGCTGCGG.................................................2212.002002000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CTATCG--CTG--CCTCAAACTAT---GCTACT........2612.002001000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CAAACTAT---GCTACTGGCAACGA2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................G--CCTCAAACTAT---GCTACTGGCAAC..2411.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TTCGTATGCGGATGCTGCGGCT-----G.........................................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AACTAT---GCTACTGGCAACG.1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CTCAAACTAT---GCTACTGGCAAC..2211.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GTATGCGGATGCTGCGGCT-----G.........................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................G--CTG--CCTCAAACTAT---GCTACTG.......2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TCAAACTAT---GCTACTGGCAAC..2111.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CAAACTAT---GCTACTGGCAACG.2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CCTTGGCATTGTCGTCCCATCTGTCTT..............................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GGATGCTGCGGCT-----GCTATCG--CTG--C...........................2411.001001000000000000000000000000000000000000000000000000000000000000
G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATGCTGGGTTC---CCTA.................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................T-----GCTATCG--CTG--CCTCAAACTAT---GCTACT........2811.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GGATGCTGCGGCT-----GCTATCG--CT...............................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GCTGCGGCT-----GCTATCG--CTG--CCT.........................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................GTGTGCTTCGTATGCGGATGCTGC...................................................2411.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................CTTGGCATTGTCGTCCCATCT...................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TGCAGTGTGCTTCGTATGCGGATGCT.....................................................2611.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................CGTCCCATCTGTCTTGCA...........................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GTGCTTCGTATGCGGATGCTGC...................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GCTTCGTATGCGGATGCTGCG..................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TATCG--CTG--CCTCAAACTAT---GC............2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CT-----GCTATCG--CTG--CCTCAAACTAT---..............2311.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
CC-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGTCTGATGCTTTTGGCATTCAGTTTCTGCGCG-----CATT------TCATAGTTGTCGCCATGCTCGCCAT---TTCACTAA---TCCTTGGCCTTGTCGTCTCATCTGTTTTACAGTGCGCCGATGCTGCA---GCAGC---CA--------TCA--CTG--CCAACAACTATGGCGGCACGGGCAACGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................TT------TCATAGTTGTCGCCATGCTCGC...........................................................................................................................2412.002200000
.............................................................................................................................................................................................................................................................................................................................................CAACAACTATGGCGGCACGGGC.....2212.002200000
..................................................................................................................................................................................................................................................................................................CCGATGCTGCA---GCAGC---CA--------TCA--CTG--CCA.........................2711.001000010
.......................................................................................................................................................................................................................................................................................................................................CTG--CCAACAACTATGGCGGCACGG.......2411.001100000
.................................................................................................................................................................................................................................................................................................................................................AACTATGGCGGCACGGGC.....1811.001100000
................................................................................................................................................................................................................T------TCATAGTTGTCGCCATGCTCGC...........................................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................................................GCCGATGCTGCA---GCAGC---CA--------TC....................................2111.001100000
.........................................................................................................................................................................................................................................................................................................................................G--CCAACAACTATGGCGGCACGGGC.....2411.001100000
..............................................................................................................................................................................................TTTCTGCGCG-----CATT------TCATAG...........................................................................................................................................2011.001000100
.........................................................................................................................................................................................................................................................AA---TCCTTGGCCTTGTCGTCTCATCTG..................................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................ACTATGGCGGCACGGGCA....1811.001000100
..................................................................................................................................................................................................................................................................................................................AGC---CA--------TCA--CTG--CCAACAACTATGGC..............2511.001100000
........................................................................................................................................................................................................................................................................................................................................TG--CCAACAACTATGGCGGCACGGGC.....2511.001100000
..............................................................................................................................................................................................................................................................................................................................................AACAACTATGGCGGCACGGGCA....2211.001000001
................................................................................................................................................................................................................................................................................................CGCCGATGCTGCA---GCAGC---CA--------TC....................................2211.001100000
............................................................................................................................................................................................................................................................................................................................................CCAACAACTATGGCGGCAC.........1911.001100000
droGri2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCAGTGTGCCGCATTTGTGGATGCAGC---C------------------------AGTTTT---GGCACTGGCAATGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:27 PM