ID:

dsi_16100

 Coordinate:

3r:5977302-5977616 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.9 -34.8 -34.7

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAGTTACTCGTTTTTTTCTGCGCGCCGTCGTTGTGAGCCGAAAAGAAAAAGTAACAAAAGAAGCAGCGCAGGAAAATCAAAATTGGCTGCAAGTGCGTGTTTTGAAAGTTTAATAACCAAGAAAAGTTAGTAAATTGAAAAAGGCACTTAAAGTGGTTACCTAAAATGAAAAGATAATGGGAAAGAGCGAAAAAAAAAGCTGACGCAAGTTCAAGGTGTAGAATTTGTGCGCGTGTGTGAGTGTGCCACAAGTTGTTTGAGCAAAAGTGGAGAAATAATATAAAAACCAAAGAAATTTCAACAGCAAGTGCAGGAAATCGAATTTTGTGTGCCAAACTTAAGGTTTTGCCTTGTGTTTTATCGAGTTTTTAGAGGTTTTAACTCTTTTTTTCCAACAAACACACACATACTCACA
*****************************************************************((((..............(((((((((((((...((((...((((((.((((........)))).))))))))))...))))))...)))))))((((..((......))..))))....(((..........)))..(((((((((........))))))))).)))).......****************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 M024
male body		 M023
head
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
........................................................................................................................................................................................................................TGTAGAATTTGTGCGCGTGTGTGAG.............................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................CGCGCCGTCGTTGTGAGCC........................................................................................................................................................................................................................................................................................................................................................................................ 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.................................................................................................................................................................................TGGGCAAGAACGAAAAAAAAA......................................................................................................................................................................................................................... 21 2 3 1.33 4 3 0 0 0 0 1 0 0 0 0
..............TTTCTGCGCGCCGTCGTTGTGAGCCG....................................................................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................GCGCAGGAAAATCAAAATTGGCTG...................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................CTGCGCGCCGTCGTTGTGAGCCG....................................................................................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................CCACAAGTTGTTTGAGCAAAA..................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.............................................................................CAAGATTGGCTGCAAGTGCGT............................................................................................................................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....ACTCGTTTTTTTCTGCGCGCCGT................................................................................................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................GACGCCGGTTCAAGGTG..................................................................................................................................................................................................... 17 2 9 0.56 5 0 0 0 5 0 0 0 0 0 0
.........................................................................................................................................................................................................GACGCCGGTTCAAGGT...................................................................................................................................................................................................... 16 2 15 0.53 8 0 0 0 7 0 0 0 0 1 0
......................................................................................................................AAGAAAAGGTAATAAATTGAAA................................................................................................................................................................................................................................................................................... 22 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................TAATGGAATAGAGCGAAATAAAAA......................................................................................................................................................................................................................... 24 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
AAGTTGTCCGTTTTTTTCTGCG......................................................................................................................................................................................................................................................................................................................................................................................................... 22 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................TGACGCCGGTTCAAGGT...................................................................................................................................................................................................... 17 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGGTGTAGAATATGTG.......................................................................................................................................................................................... 16 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................................GCCTCAAGTTGTTTGA........................................................................................................................................................... 16 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................AAGAAAGATGACGCAAGT............................................................................................................................................................................................................. 18 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GGTGTAGAATACGTGGGCGT..................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 1 0 0 0 0 0
...................GCGCGCCGGCGTTGTTA........................................................................................................................................................................................................................................................................................................................................................................................... 17 2 9 0.11 1 0 0 0 0 0 0 0 0 1 0
..............................................AAAAGTAACAGAAGAACC............................................................................................................................................................................................................................................................................................................................................................... 18 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AGATCAAGGTGTAGA................................................................................................................................................................................................. 15 1 12 0.08 1 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................................................................GAAATAATAGATAAACCAAAGT.......................................................................................................................... 22 3 12 0.08 1 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................................................................................................TAAGTGGACAAATATTATAAAA.................................................................................................................................. 22 3 13 0.08 1 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................AGCGAAAAGAAAAGCAGGCGC................................................................................................................................................................................................................. 21 3 16 0.06 1 0 0 0 0 0 0 0 0 0 1
........................ACGTCGCTGTGACCCGAAA.................................................................................................................................................................................................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................................................GTTTGAGCAAAAGTA.................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................GACGCCTGTTCAAGGT...................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TTCAATGAGCAAAAAAAGACGCGCGGCAGCAACACTCGGCTTTTCTTTTTCATTGTTTTCTTCGTCGCGTCCTTTTAGTTTTAACCGACGTTCACGCACAAAACTTTCAAATTATTGGTTCTTTTCAATCATTTAACTTTTTCCGTGAATTTCACCAATGGATTTTACTTTTCTATTACCCTTTCTCGCTTTTTTTTTCGACTGCGTTCAAGTTCCACATCTTAAACACGCGCACACACTCACACGGTGTTCAACAAACTCGTTTTCACCTCTTTATTATATTTTTGGTTTCTTTAAAGTTGTCGTTCACGTCCTTTAGCTTAAAACACACGGTTTGAATTCCAAAACGGAACACAAAATAGCTCAAAAATCTCCAAAATTGAGAAAAAAAGGTTGTTTGTGTGTGTATGAGTGT
******************************************************************************************************************************************************************************((((..............(((((((((((((...((((...((((((.((((........)))).))))))))))...))))))...)))))))((((..((......))..))))....(((..........)))..(((((((((........))))))))).)))).......***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
..............................................................................................................................................................................................................................................CTCACACGGTGTTCAACAAACT........................................................................................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0
...........................AGCAACTCTCGGCTTG.................................................................................................................................................................................................................................................................................................................................................................................... 16 2 20 1.85 37 0 37 0 0 0 0 0 0
......GAGCAAAAAAAGACGCGCGGCAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAGGTTGTTTGTGT............ 18 0 1 1.00 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................CACACTCACACGGTGTTCAACAAACT........................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................ACTCACACGGTGTTCAACAAACT........................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................TCTAACCGACGTTCACGCACAAA......................................................................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................ATCACACGGTGTTCAACAAACT........................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGTGTGTATGAGT.. 18 0 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................CACTCACACGGTGTTCAACAAACT........................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTCGACTGCGTTCAAGTTCCA...................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................AGCAACTCTCGGCTT..................................................................................................................................................................................................................................................................................................................................................................................... 15 1 7 0.86 6 0 6 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................................AAAAAATGGTTGCTTTTGTGT.......... 21 3 20 0.40 8 0 0 0 0 8 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAGGTTTTTTGTGT............ 19 1 3 0.33 1 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAGGTTGATAGTGT............ 19 2 3 0.33 1 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................................................................................................................................GAAAAAAAAAGGTTGATAGTGT............ 22 3 3 0.33 1 0 0 1 0 0 0 0 0
............................................................................................................................TCAATGATTTAAGTTTTACCGT............................................................................................................................................................................................................................................................................. 22 3 5 0.20 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................AAAATAGGTTGTTTGTGTT........... 19 2 7 0.14 1 0 1 0 0 0 0 0 0
...........................................................................TAGTTTTAAACGACGATC.................................................................................................................................................................................................................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTGTGTATAAGTG. 17 1 14 0.07 1 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................................................................................................................................................................AAATTGAGAAAAAAAAG...................... 17 1 18 0.06 1 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................................................................ATATTTTTGGCTTCTT......................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................................................................................................................................................AAAATTGAGACAAAAA........................ 16 1 20 0.05 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................................AAACGGTGTTCAACA............................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:5977252-5977666 - dsi_16100 AAGTTACT-----CGTTTTTTTCTGCGCGC-------------------------CGTCGTTGTGAGCCG--AA---------AAGAA-----------AAAGTAACAA-----AAGAAGCAGCGCAGGAAAA-------------TCA-AAAT---TGGCTGC---AAGTGCGTGTTTTG---------------------------------AAAG-------TTTA-ATAACCAAGAA----------------AAGTTAGTAAATTGAAAA-AGGCACTTAAAGTGGTTACCTAAAA-----------------------------TGA---AAAGATAATGGGAAAGAGCGAA-AAAAAAAGCTGAC-----------GCAAGTTCAAGGTGTAGAATTTG----TG--------CGCGTGTGTGAGTGTGCCACAAGTTGTTTGAGCAA-AAGTG--GAGAAATAATAT-AAAAACCAA-AGAAATTTCAACAGCA-AGTGCAGGAAATCGAAT-----------TTTGT------------------------------------------------G----TGCCAAACTTAAGGTTTTGCCTTGT---------------------G--TTTTATCGAGTTTTTAGAGG-TTTTAACTC--TTTTTTT--C--------------CAA---------------------CAAACACACACATACTCA------------------------------------CA-------------
droSec2 scaffold_25:486628-487041 - AAGTTACT-----CGTTTTTTTCTGCGCGC-------------------------CGTCGTTGTGAGCCG--AA---------AAGAA-----------GAAGTAACAA-----AAGAAGCAGCGCAGGAAAA-------------TCA-AAAT---TGGCTGC---AAGTGCGTGTTTTG---------------------------------AAAG-------TTTA-ATAACCAAGAA----------------AAGTTAGTAAATTGAAAA-AGGCACTTAAAGTGGTTACCTAAAA-----------------------------TGA---AAAGATAATGGGAAAGAGCGAA--AAAAAAGCTGAC-----------GCAAGTTCAAGGTGTAGAATTTG----TG--------CGCGTGTGTGAGTGTGCCACAAGTTGTTTGAGCAA-AAGTG--GAGAAATAATAT-AAAGTCCGA-AGGAATTTCAACAGCA-AGTGCATGAAATCGAAT-----------TTTGT------------------------------------------------G----TGCCAAACTTAAGGTTTTGCCTTGT---------------------G--TTTTATCGAGTTATTAGAGG-TTTTAACTC--TTTTTTT--C--------------CAA---------------------CAAACACACACATACACA------------------------------------CA-------------
dm3 chr3R:15289312-15289726 + ATGTTACT-----GGTTTTTTTCTGCGCGC-------------------------CGTCGTTGTGAGCCG--AG---------AAGAA-----------AAAGTAACAA-----AAGAAGCAGCGCAGGAAAA-------------TCA-AAAT---TGGCTGC---AAGTGCGTGTCCCG---------------------------------AAAG-------TTTA-ATAACCAAGAA----------------AAGTTTGTAAATTGAAAA-AGGCACTTAAAGTGGTTACCTAAAA-----------------------------TGA---AAAGATAATGGGAAAGAGCAAA-AAAAAAAGCTGAC-----------GCAAGTTCAAGGTGTAGAATTTG----TG--------CGCGTGTGTGAGTGTGCCACAAGTTGTTTGAGCAA-AAGTG--GAGAAATAATAT-AAATTCCGA-AGGAATTTCAACAGCA-AGTGCTTGAAATCGCAA-----------TTGGT------------------------------------------------G----TGCCAAACTTAAGGTTTTGCCTTGT---------------------C--TTTAATCGAGTTTTTAGAGG-TTTTAACTC--TTTTTTT--C--------------CAA---------------------CAAACACACACATTCACG------------------------------------CA-------------
droEre2 scaffold_4770:6351720-6352139 - AAGTTACT-----GGTTTTTTTGTGCGCGC-------------------------CGTCGTTTTAAGCCG--AG---------AAGAA-----------AAAGTAACAA-----AAGAAGCAGCAAGGGAAAA-------------TTA-AAAT---TGGCTGC---AAGTGCGTGTTTTG---------------------------------AAAG-------TTTA-ATAACCAAGGGTT---------AAACGAAGTTAGTTAATTGAAAA-AGGCACAGAAAGTAGTTACCGAAAA-----------------------------TGA---AAAGATAATGGGAAAGAGCGAA--AAAAAAGCTGAC-----------GCAAGTTCAAGGTGTTGAGTTTG----TG--------CGCGTGTGTGAGTGTACCACAAGTTGTTTGTGAAA-ATGCG--GAGAAATAATAA--AAACCCAA-AGGAATTTCTACAGCAAAGTGCATGAAATCGCAT-----------TTAGA------------------------------------------------G----TGCCAAACTTGGGATTTTGCCTTGA---------------------A--TTTAAT-GGGCTTCTAGAGG-CTTTAACTC--TTTTTTT--C--------------CAA---------------------CAAGCACACACATACACA------------------------------------CA-------------
droYak3 3R:4021007-4021392 + AAGTTACA-----AGTTTTTTTCTACGCGC-------------------------CGTCGTTTTAAGCCG--AG---------AAGAA-----------AAAGTAACAAAAAAAAAGAAGCAGCCCAGGAAAA-------------TTA-AAAT---TGGCTGC---AAGTGCGCGTTTTG---------------------------------AAAG-------TTTA-ATAACCAAGAA----------------AAGTTAGTTAATTAAAAA-AGGCACAGAATGTGGTTACCAAAAA-----------------------------TAA---AAA------------------------------GAC-----------GCAAGTTCAAGGTGTAGAATTTG----TA--------CGCGTGTGTGAGTGTGCCACAAGTTGTTCGTGAAA-AAGTG--GAAAAATAATAC-AAAATCCGA-AGGAATTTCCGCAGCAAAGTGCATGAAATCGCAT-----------TTGGT------------------------------------------------G----TGCCAAACTAAAGGTTTTGCCTTGT---------------------G--TTTAAT-GGGTTTTTAGAGG-CTTTAACTC--TTTTTTT--T---------------AA---------------------CAAAAACAC----ACACA------------------------------------CA-------------
droEug1 scf7180000409804:1565138-1565542 + TAATGGCT-----CGTTTTTTACAGTGC-------------------------------G-TTTAAGCCG--AG---------AAAAA-----------------------------AAGCAGCAAAGGAAAA-------------TCATTAAT---TGGCTGTAAAAAGTGTGTGTTCTT---------------------------------AAAG-------TTGA-ATAACCAAAAG-G-------------CAAGCCAGTTAGTTGAAAA-GTGCAAAGAAAGTGGCCACCAAAAA-----------------------------TGA---GAAGATAATGAAGAAAAGCAA----AAAAAGCTGAC-----------GCAAGTTCAAGGTGTAGAGTTTGTGCGTG--------CGTGTGTGTGAGTGTGCCACAAGTTGTTTGAACTAAAAGTG--CAAAATTATCAA-TATATTTTATTGAAATAACAACAGCA-AGTGCAGGAATTTGTAT-----------TTAGT------------------------------------------------G----TAGCGAAACGAAGGTTTTACCTTAG---------------------T-TTTTAAC-GAGTTTTTAGGTGCTTTTAACTC--TTTTTTCTTC--------------CAA---------------------CAAACACTCAC--ACATA------------------------------------CA-------------
droBia1 scf7180000302402:1054154-1054553 + TAGTTTCC-----AGTTTT--TATGCGCGC-------------------------CGTCGTT-TAAGCCG--AG---------AAAAA--------------------------AAGAAGCAACAAAAGA-TA-------------TCATAAAT---TGGCTGCGAAAGGTGTGTGTTCCA---------------------------------GAAG-------ATTA-ATAACCCAAAAAG-------------TAAGGCAGTTAATTAAAGA-GTGCAAAGAGTGTGGCC---AA-AA-----------------------------AAG---GCAGATAATAAGCAAGG----A--AAAAAAGCTGAC-----------GCAAGTTCAAGGTGTAGAATTTG----TG--------CGAGTGTGTGCGTGTGCCACAAGTTGTTCAAACAA-AAGTG--CAGAATTAACAA-CGAGTTCGA-AGGAATTGCAACAGCC-AGTGCCGGAATTTGCAT-----------TCAGT------------------------------------------------T----CGCCAAACTTTGGGTTTTACCTTGG---------------------A--TTTAAT-GAGTTTTCAATGG--TTTGACTCGCTTTTTCC-TC--------------CAT---------------------CAAACACACACACACGCG------------------------------------CA-------------
droTak1 scf7180000415710:559031-559443 - TAGTTTAT-----AGTTTTT-TATGCGCGCC------------------------CGTCGTTTTAAGCCG--AG---------CAGAA---------GAGGAGTAACAA-----AAGT-------------AA-------------TCCCAAAT---TGGCTGCCAAAAGTGCGGGTTCTG---------------------------------AAAG-------ATTA-ATAGCCAG-AA----------------AAGGCAGTTAATTGAAGA-GTGCAAAGAAAGTGGCCACCAAAAAG----------------------------TGA---GCAGATAATAAAGAAAATCAAA--AAAAAAGCTGAC-----------ACAAGTTCAAGGTGTAGAATTTGTGCGTG--------CGTGTGTGTGAGTGAGCCACAAGTTGTTTAAACAA-AAGTG--CAGAAATAATAG-CAAGATTGA-AGGAATTTCAACGGCA-AGTGCAGGAACTTGCAT-----------TCGGT------------------------------------------------G----TGCCAAATTTAAGGTTTTACCTTGG---------------------T-TTTTAAT-GAGTTTTTGGCTGCTTTTAACTC--TTTTTTT-TC--------------CAG---------------------CAAACACACACATATACA------------------------------------CA-------------
droEle1 scf7180000490994:1081302-1081689 + TAGTTTTT-----CGATTTTTAATGC-CGC-------------------------CGTCGTTTTAAGCCG--AG---------AAAAA-----------GAAATTACAC-----AAAA----------------------------------ATGAATGGC---AAAAAGTGTGTGTTTCT---------------------------------AAAG-------TTGT-AAAGCCAAAAA-----------------AGGC---------AAAT-GTGCAAAAGAAGTGGTAACCAA-AA-----------------------------TGA---GTAGAAAATAAAGAAAATCATAAAAAAAGAGCTGAC-----------GCAAGTTCAAGGTGTA-----CG----CG--------TGTGTGTGTGAGTGAGCCACAAGTTGTTTAAACAA-AAGTG--CAGAAATAATAA-CAAATTTTT-AAGAATTTTATCAGGA-AGTGGAGGGAATGTCAT-----------TTTGT------------------------------------------------A----AGCCCAATGCGATGTTTTGCCTTGG---------------------T-TTTTAAT-GGGTTTTTGGCTGCTTTTAACTC--TTTTTTC--GAA----T---AT--CCA---------------------CACATATACATACACACA------------------------------------CA-------------
droRho1 scf7180000770577:11485-11883 - TAGTTTTC------GATTTTTTCTAC-CGC-------------------------CGTGGTTTTAATTCTCGGC--------TTAAAA-----------GAAGTAACTA-----AAGAAGCAGAAAAGAAAAA------------GCCATTAAT---TAGCAGCAAAAAGTGCGTTATCTT---------------------------------AAAG-------TTGT-ATAGCCAAAAAAG---------------AGGC----------AAA-GTGCAAAGAAAGTGGCC----AAAA-----------------------------TGA---GCAGAAAATAAAGAAAATCTTA--TAAAAAGCTGAC-----------GCAAGTTCAAGGTGTA-----CG----CG--------TGTGTGTGTTAGTGTGCCACAAGTTGTTTAAACAA-AAATG--CAAAAA--GCAA-CAAATTCTT-AAGAATTTTAACAGCA-AGTCCAAGGAATTGCAT-----------TTAGT------------------------------------------------A----TGCCAAGTTTGAGATTTTTCCTTGG---------------------T-TTTTAAT-AAGTTTTTAGGTGCTTTTGACTC--TTTTTTC--C--------------GAA---------------------CAAACACA--CATACACA------------------------------------CA-------------
droFic1 scf7180000454126:271705-272110 + TAGTTT-------GGTTTTTAACTGCGCGC-------------------------CGTCGTTTTTAGCCG--AC---------AAAAC----------CGAATTAACAA-----AAGAAGCGGCGAATAAAAG-------------TCAAAAAG---TTGCTGCT-TAAGTGTGTGATCTA---------------------------------A----------TCTA-A-AGCCCAAAA----------------AAGCCGTTTAATTGAATA-GTGCTAAGAAAGTGACCAGCGAA-C-----------------------------GGA---AAAGATAAT---AAAAAGCAT----AAGAAGCTGAC-----------GCAAGTTCAAGGTGTA---TTTGTGCATG--------TGTGTGTGCGATTGTGCTACAAATTGTTTAAATAA-AAGTG--CAAAAATTATAT-TATGTTCCT-AGGGATTACAGCAAAA-AGTGAAGCAAGTAGCAA-----------TAAGT------------------------------------------------T----AGCCAAAGTAAAGGTTTTGCCTTGG---------------------GTTTCTGAT-GAGTTTTTAGGTGCTTTTAACGT--TTTTT-------------------CAA---------------------CAAACACACGCATACACA------------------------------------CA-------------
droKik1 scf7180000302707:534757-535166 + GC--------------------------TT-------------------------CGTCGTT-TGAGCCG--AG---------AATAA-----------ATAAAAATAA-----AAGAGGCAGCGAAAGAAGCACAGCGCCGAAGGGCA-AAGG---TGGCTGGT-AAAGTGTGTGTTTTA---------------------------------AAAGTGTATAAGTTT-ATGGCCTAAAAAGTGTTCATAAT-----------TCGATCACAAA-GTGCAAAGAAAGTGGCTCCC-AGGT-----------------------------TGA---GCAGAAAATAATGAAAAGCATA---AAAAAGCTGACGC--GCTGCCAGCAAGTTCAAGGTGTATAGCTTGTGC--G--------CGTGTGTATGTGTGTGCAACAAGTTGTTTACACTA-AAGTG--ACTAAATAACAAACAAATCCAG-TGGAAGTTT-GTAGC----------GAAATGTTT-----------TTACC------------------------------------------------G----TGCAGCAGTTAATGTTTTGCCTTGG---------------------T--TTTAAT-A----------T-CTTTTAACTC--TTTTTTT--C----------AC--CTA---------------------AAAACACACCCATACATA------------------------------------TA-------------
droAna3 scaffold_13340:15103932-15104373 - AAGTTGAAGTGCTCG------CGAGAGCGGCCGCGACTGAGTTATTAACGGAAGGCTGCGTT-TCAGCCA--AG---------AAAAA-----------AT------CA-----AAGAAGCT-------------------------TA-AT---AATAG---CAAAAGGTGCC----CCA---------------------------------AAAG-------CTAATACA----------AGTGAGATATAA--AAGTG---------AGA-TCT--------G--------------TGAAAATAGTAATCTAATCAGATTCGAATTGG---AAAGTAAAGAGGAAGAGGCTGA-GAAAATAGCCG---------------AAGTTCAAGGTGTCGAAGGTGTGCGTGTGTG----TGTGTGTGTGTGTGTGCAACAAGTTGTTTAAACTG-AAATT--CAAA-------T-AGAATTCTG-TGGAATTTTTGCAACA-AGTGTAAATAAATATATAAACCGACCCTGTAGA------------------------------------------------GT---GGCAAAGTTTGTGATTTCGCTTTAT---------------------T--TATTGT-TCGTTTTCTGAGAGTTTTAACTC--TTTTTTT--TTTATTATATTTTCTTGA---------------------CGGACACACACACATATA------------------------------------GA-------------
droBip1 scf7180000395971:80631-81017 + GAATGC--------------------------------------------------TGCGTT-TCAGCCA--AG---------AAAAA-----------T-------TA-----AAGAAGCT-------------------------TA-AT---AATAG---CAAAAGGTGCA----CTA---------------------------------AAAA-------TTAA-ACAACCATACACA---------TAAGCAAGTG---------AGA-TCT--------G--------------TGAATATAATAATCTAATCAGAATCGAATTGG---AAATTAAATAGAAAAAAGCTGA-GAATACAGCTG---------------AAGTTCAAGGTGTAGAAGGTGCGCGTG--------TGCGTGTGTGTGTGTGCAACAAGTTGTTAAAACTG-AAATT--GAATAA--------GAATTCGG-TGGAATTTTTGCAACA-AGTGTGAAGAAATACATAAACCAAACCCGTAGA------------------------------------------------CT---GCCAAAGTTTATGTTTTCGCTTTAT---------------------T--TATTGT-TCGTTTTTTGAGGGTTTTAACTC--TTTTATT--TT-----T-TTTTCTTGA---------------------CGGACACACAC--ATATA------------------------------------GA-------------
dp5 2:29751317-29751767 + TTTTT----------------CCTTAGCTC-------------------------CGATC---------G--AACGAACGAAAGACAACAAGCAACT----------CC-----AATAAGAAGTGCCAAAAGA-------------TAG-CTAT---TGGCTATAAAGAGTGTGTGCTATTAACAAAATAATAAAATTTAATCATAATTAAAAG----CGTGAAGGTAAAAC-----------AGTGCAAAATAG--AATG---------AAAA-AGA--------G--------------GTGAAAAAGTAATAC----AAAATCGAACTACAGCCAAAAAAATACAG-------------CGAAGCTGACGACAGCCAGCAGCAAGTTCAAGGTGTA---CGCGCGTGTG--------TGTGTGTATGTATGAGCAACAAGTTGTTTGAAT-------GCAA-AAATTTATCA-TAATTTTGATTGAAATGCAAACAAAA-AGTAT-----------------------GCATAGTGTTGTTGACTAAA--GAATTATAATAATTTC------------------------------AAGT----------------GATTGTGCGGCTTTAAT-TC------GAGTTT-------TATTTAACTC--TTTTTCT--C--------------ACG---------------------CATTCACT--AATAC----------------------------------CAATGCAAGGGCCGC-----
droPer2 scaffold_6:5123857-5124307 + TTTTT----------------CCTTAGCTC-------------------------CGATC---------G--AACGAACGAAAGACAACAAGCAACT----------CC-----AATAAGAAGTGCCAAAAGA-------------TAG-CTAT---TGGCTATAAAGAGTGTGTGCTATTAACAAAATAATAAAATTTAATCATAATTAAAAG----CGTGAAGGTAAAAC-----------AGTGCAAAATAG--AATG---------AAAA-AGA--------G--------------GGGAAAAAGTAATAC----AAAATCGAACTACAGCCAAAAAAATACAG-------------CGAAGCTGACGACAGCCAGCAGCAAGTTCAAGGTGTA---CGCGCGTGTG--------TGTGTGTATGTATGAGCAACAAGTTGTTTGAAT-------GCAA-AAATTAATAA-TCATTCTGATTGAAATGCAAACAAAA-AGTAT-----------------------GCATAGTGTTGTTGACTAAA--GAATTATAATAATTTC------------------------------AAGT----------------GATTGTGCGGCTTTAAT-TC------GAGTTT-------TATTTAACTC--TTTTTCT--C--------------ACG---------------------CATTTACC--AATAC----------------------------------CAATGCAAGGGCCGC-----
droWil2 scf2_1100000004943:4090430-4090716 + AAAAGA---------------------CGC-------------------------CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGCCAGCAAGTTCAAGGTGTTGCGGCTGTGTGTGTGTGCTCGCGAGTGTGTGTGTGTGCAACAAGTTGTTAAAACAA-AA---------------------------------------CGAAA-AGTGC-----------------------G-ATTTTGTTATTGGCCAAAAAGTGTTGTG----TTTCATTTGTAAAATTTATGTGCAGGCCAAGTTTATGTGTTTTCTGTGCTCACGGATTGAACCCTTTTTAC-TCCCGA---AGCCT-------TTTTTAACTC--TTTTTTC--CCTTTTCT-TCTTCTCTATGTTCATTCGTATGTACATCATATATATACATTTACACG------------------------------------CA-------------
droVir3 scaffold_13047:16323149-16323258 - TTTTTTGG-----CATTTTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCAACTC--TTTTTCT--TG-----T---TC--CCA---------------------CACACACACACACACATACAAAATCATACATACACACATGCACGCACACAAACACATAAATTGTAGTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGTTACT-----CGTTTTTTTCTGCGCGC-------------------------CGTCGTTGTGAGCCG--AA---------AAGAA-----------AAAGTAACAA-----AAGAAGCAGCGCAGGAAAA-------------TCA-AAAT---TGGCTGC---AAGTGCGTGTTTTG---------------------------------AAAG-------TTTA-ATAACCAAGAA----------------AAGTTAGTAAATTGAAAA-AGGCACTTAAAGTGGTTACCTAAAA-----------------------------TGA---AAAGATAATGGGAAAGAGCGAA-AAAAAAAGCTGAC-----------GCAAGTTCAAGGTGTAGAATTTG----TG--------CGCGTGTGTGAGTGTGCCACAAGTTGTTTGAGCAA-AAGTG--GAGAAATAATAT-AAAAACCAA-AGAAATTTCAACAGCA-AGTGCAGGAAATCGAAT-----------TTTGT------------------------------------------------G----TGCCAAACTTAAGGTTTTGCCTTGT---------------------G--TTTTATCGAGTTTTTAGAGG-TTTTAACTC--TTTTTTT--C--------------CAA---------------------CAAACACACACATACTCA------------------------------------CA-------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAATTTG----TG--------CGCGTGTGTGAG...................................................................................................................................................................................................................................................................................................................................................................2512.00200000000000020000
.........................CGCGC-------------------------CGTCGTTGTGAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
...................TTTCTGCGCGC-------------------------CGTCGTTGTGAGCCG--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..........................................................................................................................GCGCAGGAAAA-------------TCA-AAAT---TGGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
......................CTGCGCGC-------------------------CGTCGTTGTGAGCCG--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAAGTTGTTTGAGCAA-AA.........................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.....ACT-----CGTTTTTTTCTGCGCGC-------------------------CGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGAGCAA-AAGTA--....................................................................................................................................................................................................................................................................................................................................15200.05100000000100000000
droSec2
AAGTTACT-----CGTTTTTTTCTGCGCGC-------------------------CGTCGTTGTGAGCCG--AA---------AAGAA-----------GAAGTAACAA-----AAGAAGCAGCGCAGGAAAA-------------TCA-AAAT---TGGCTGC---AAGTGCGTGTTTTG---------------------------------AAAG-------TTTA-ATAACCAAGAA----------------AAGTTAGTAAATTGAAAA-AGGCACTTAAAGTGGTTACCTAAAA-----------------------------TGA---AAAGATAATGGGAAAGAGCGAA--AAAAAAGCTGAC-----------GCAAGTTCAAGGTGTAGAATTTG----TG--------CGCGTGTGTGAGTGTGCCACAAGTTGTTTGAGCAA-AAGTG--GAGAAATAATAT-AAAGTCCGA-AGGAATTTCAACAGCA-AGTGCATGAAATCGAAT-----------TTTGT------------------------------------------------G----TGCCAAACTTAAGGTTTTGCCTTGT---------------------G--TTTTATCGAGTTATTAGAGG-TTTTAACTC--TTTTTTT--C--------------CAA---------------------CAAACACACACATACACA------------------------------------CA-------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............TTTTTTTCTGCGCGC-------------------------CGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
...................................................................................................................................AA-------------TCA-AAAT---TGGCTGC---AAGTGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
..........................GCGC-------------------------CGTCGTTGTGAGCCG--AA---------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
............................................................................................................................................................................................................................................................................................................................................................AAAGAGCGAA--AAAAAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................18150.0710001
dm3
ATGTTACT-----GGTTTTTTTCTGCGCGC-------------------------CGTCGTTGTGAGCCG--AG---------AAGAA-----------AAAGTAACAA-----AAGAAGCAGCGCAGGAAAA-------------TCA-AAAT---TGGCTGC---AAGTGCGTGTCCCG---------------------------------AAAG-------TTTA-ATAACCAAGAA----------------AAGTTTGTAAATTGAAAA-AGGCACTTAAAGTGGTTACCTAAAA-----------------------------TGA---AAAGATAATGGGAAAGAGCAAA-AAAAAAAGCTGAC-----------GCAAGTTCAAGGTGTAGAATTTG----TG--------CGCGTGTGTGAGTGTGCCACAAGTTGTTTGAGCAA-AAGTG--GAGAAATAATAT-AAATTCCGA-AGGAATTTCAACAGCA-AGTGCTTGAAATCGCAA-----------TTGGT------------------------------------------------G----TGCCAAACTTAAGGTTTTGCCTTGT---------------------C--TTTAATCGAGTTTTTAGAGG-TTTTAACTC--TTTTTTT--C--------------CAA---------------------CAAACACACACATTCACG------------------------------------CA-------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................CGTTGTGAGCCG--AG---------AAGAA-----------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCGCGC-------------------------CGTCGTTGTGAGCCG--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CGC-------------------------CGTCGTTGTGAGCCG--AG---------AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................G---------AAGAA-----------AAAGTAACAA-----AAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCGCGC-------------------------CGTCGTTGTGAGCCG--AG---------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TGGGAAAGAGCAAA-AAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AAT---TGGCTGC---AAGTGCGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................C-----------GCAAGTTCAAGGTGTAGAATT...............................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGCGC-------------------------CGTCGTTGTGAGCCG--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................A-AAAT---TGGCTGC---AAGTGCGTGTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAAGGTGTAGAATTTG----TG--------CGCGTG.........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................GCGC-------------------------CGTCGTTGTGAGCCG--AG---------AAGAA-----------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GTTCAAGGTGTAGAATTTG----.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TG----TG--------CGCGTGTGTGAGTGTGC..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....ACT-----GGTTTTTTTCTGCGCGC-------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---------------------C--TTTAATCGAGTTTTTAGA...................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................TCAAGGTGTAGAATTTG----TG--------...............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA-AAGTG--GAGAAATAATAT-.......................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................A-AAAT---TGGCTGC---AAGTGCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................GCGCGC-------------------------CGTCGTTGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CGC-------------------------CGTCGTTGTGAGCCG--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTGTAGAATTTG----TG--------CGCGT..........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AGCGCAGGAAAA-------------TCA-AAAT---TGGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................AA-----AAGAAGCAGCGCAGGAAAA-------------TC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TAAAA-----------------------------TGA---AAAGATAATGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................TGTGAGCCG--AG---------AAGAA-----------AAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
......................CTGCGCGC-------------------------CGTCGTTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GAAAA-AGGCACTTAAAGTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGAGCAA-AAGTG--GAGA................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................GTGTCCCG---------------------------------AAAG-------TTTA-A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CA-AAAT---TGGCTGC---AAGTGCGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCCTTGT---------------------C--TTTAATCGAG...........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGCGCGC-------------------------CGTCGTTGTGAGCCG--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................A-AAAT---TGGCTGC---AAGTGCGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CAGGAAAA-------------TCA-AAAT---TGGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........................GCGC-------------------------CGTCGTTGTGAGCCG--AG---------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GC---AAGTGCGTGTCCCG---------------------------------AA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CGTTGTGAGCCG--AG---------AAGAA-----------AAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
........................................................................................................AACAA-----AAGAAGCAGCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA-AGTGCTTGAAATC...............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--TTTTTTT--C--------------CAA---------------------CAAACACACACATT.......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................A-------------TCA-AAAT---TGGCTGC---AAGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................AGTTCAAGGTGTAGAATTTG----TG--------CGC............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTCTGCGCGC-------------------------CGTCGTTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................GTCGTTGTGAGCCG--AG---------AAGAA-----------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGCGC-------------------------CGTCGTTGTGAGCCG--AG---------AAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACAGCA-AGTGCTTGAAATCGCAA-----------T...............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTTTTTCTGCGCGC-------------------------CGTCGTTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AAGTGCGTGTCCCG---------------------------------AAAG-------TTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCAA-----------TTGGT------------------------------------------------G----TGCCAAACT.............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AAAA-AGGCACTTAAAGTGGTTAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AGAATTTG----TG--------CGCGTGTGTGA....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................GTCGTTGTGAGCCG--AG---------AAGAA-----------AAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GTTGTGAGCCG--AG---------AAGAA-----------AAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GCGTGTCCCG---------------------------------AAAG-------TTTA-A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GC-------------------------CGTCGTTGTGAGCCG--AG---------AAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................GCGCGC-------------------------CGTCGTTGTGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................A---AAAGATAATGGGAAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
............................................................................................................A-----AAGAAGCAGCGCAGGAAAA-------------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................TTCTGCGCGC-------------------------CGTCGTTGTGAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AAAA-----------------------------TGA---AAAGATAATGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AGGAAAA-------------TCA-AAAT---TGGCTGC---AAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................ACCAAGAA----------------AAGTTTGTAAATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AAAGATAATGGGAAAGAGCAAA-............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TGTGAGCCG--AG---------AAGAA-----------AAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................AGGTGTAGAATTTG----TG--------CC.............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................GTTGTGAGCCG--AG---------AAGAA-----------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................GCGCGC-------------------------CGTCGTTGTGAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...TTACT-----GGTTTTTTTCTGCGCGC-------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..GTTACT-----GGTTTTTTTCTGCGCGC-------------------------CGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AGAATTTG----TG--------CGCGTGTGTGT....................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAGTTACT-----GGTTTTTTTGTGCGCGC-------------------------CGTCGTTTTAAGCCG--AG---------AAGAA-----------AAAGTAACAA-----AAGAAGCAGCAAGGGAAAA-------------TTA-AAAT---TGGCTGC---AAGTGCGTGTTTTG---------------------------------AAAG-------TTTA-ATAACCAAGGGTT---------AAACGAAGTTAGTTAATTGAAAA-AGGCACAGAAAGTAGTTACCGAAAA-----------------------------TGA---AAAGATAATGGGAAAGAGCGAA--AAAAAAGCTGAC-----------GCAAGTTCAAGGTGTTGAGTTTG----TG--------CGCGTGTGTGAGTGTACCACAAGTTGTTTGTGAAA-ATGCG--GAGAAATAATAA--AAACCCAA-AGGAATTTCTACAGCAAAGTGCATGAAATCGCAT-----------TTAGA------------------------------------------------G----TGCCAAACTTGGGATTTTGCCTTGA---------------------A--TTTAAT-GGGCTTCTAGAGG-CTTTAACTC--TTTTTTT--C--------------CAA---------------------CAAGCACACACATACACA------------------------------------CA-------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTTTG----TG--------CGCGTGTGTGAGT..................................................................................................................................................................................................................................................................................................................................................................2512.0020000020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTACCACAAGTTGTTTGTGAAA-...........................................................................................................................................................................................................................................................................................................................................2811.0010000100
.........................................................................................................................AGCAAGGGAAAA-------------TTA-AAAT---TGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAGCAAAGTGCATGAAATCGC.............................................................................................................................................................................................................................................................................2411.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTTTG----TG--------CGCGTGTGTGA....................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..........................................................CGTTTTAAGCCG--AG---------AAGAA-----------AAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.................................................................................................................................................................................................................................................................................................................................................................GCGAA--AAAAAAGCTGAC-----------G...................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
..GTTACT-----GGTTTTTTTGTGCGCGC-------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................TG----TG--------CGCGTGTGTGAGTGTACCACA..........................................................................................................................................................................................................................................................................................................................................................2511.0010000100
droYak3
AAGTTACA-----AGTTTTTTTCTACGCGC-------------------------CGTCGTTTTAAGCCG--AG---------AAGAA-----------AAAGTAACAAAAAAAAAGAAGCAGCCCAGGAAAA-------------TTA-AAAT---TGGCTGC---AAGTGCGCGTTTTG---------------------------------AAAG-------TTTA-ATAACCAAGAA----------------AAGTTAGTTAATTAAAAA-AGGCACAGAATGTGGTTACCAAAAA-----------------------------TAA---AAA------------------------------GAC-----------GCAAGTTCAAGGTGTAGAATTTG----TA--------CGCGTGTGTGAGTGTGCCACAAGTTGTTCGTGAAA-AAGTG--GAAAAATAATAC-AAAATCCGA-AGGAATTTCCGCAGCAAAGTGCATGAAATCGCAT-----------TTGGT------------------------------------------------G----TGCCAAACTAAAGGTTTTGCCTTGT---------------------G--TTTAAT-GGGTTTTTAGAGG-CTTTAACTC--TTTTTTT--T---------------AA---------------------CAAAAACAC----ACACA------------------------------------CA-------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCACAAGTTGTTCGT................................................................................................................................................................................................................................................................................................................................................1811.00100010000000
.................................................................................................................................AAAA-------------TTA-AAAT---TGGCTGC---AAGTGCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTTGTTCGTGAAA-AAGTG--GAAA................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...................................................................................................AAAGTAACAAAAAAAAAGAAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.................................................................................................................................................................TGC---AAGTGCGCGTTTTG---------------------------------AAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
................TTTTTTCTACGCGC-------------------------CGTCGTTTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
droEug1
TAATGGCT-----CGTTTTTTACAGTGC-------------------------------G-TTTAAGCCG--AG---------AAAAA-----------------------------AAGCAGCAAAGGAAAA-------------TCATTAAT---TGGCTGTAAAAAGTGTGTGTTCTT---------------------------------AAAG-------TTGA-ATAACCAAAAG-G-------------CAAGCCAGTTAGTTGAAAA-GTGCAAAGAAAGTGGCCACCAAAAA-----------------------------TGA---GAAGATAATGAAGAAAAGCAA----AAAAAGCTGAC-----------GCAAGTTCAAGGTGTAGAGTTTGTGCGTG--------CGTGTGTGTGAGTGTGCCACAAGTTGTTTGAACTAAAAGTG--CAAAATTATCAA-TATATTTTATTGAAATAACAACAGCA-AGTGCAGGAATTTGTAT-----------TTAGT------------------------------------------------G----TAGCGAAACGAAGGTTTTACCTTAG---------------------T-TTTTAAC-GAGTTTTTAGGTGCTTTTAACTC--TTTTTTCTTC--------------CAA---------------------CAAACACTCAC--ACATA------------------------------------CA-------------SizeHit CountTotal NormTotal
No Reads
droBia1
TAGTTTCC-----AGTTTT--TATGCGCGC-------------------------CGTCGTT-TAAGCCG--AG---------AAAAA--------------------------AAGAAGCAACAAAAGA-TA-------------TCATAAAT---TGGCTGCGAAAGGTGTGTGTTCCA---------------------------------GAAG-------ATTA-ATAACCCAAAAAG-------------TAAGGCAGTTAATTAAAGA-GTGCAAAGAGTGTGGCC---AA-AA-----------------------------AAG---GCAGATAATAAGCAAGG----A--AAAAAAGCTGAC-----------GCAAGTTCAAGGTGTAGAATTTG----TG--------CGAGTGTGTGCGTGTGCCACAAGTTGTTCAAACAA-AAGTG--CAGAATTAACAA-CGAGTTCGA-AGGAATTGCAACAGCC-AGTGCCGGAATTTGCAT-----------TCAGT------------------------------------------------T----CGCCAAACTTTGGGTTTTACCTTGG---------------------A--TTTAAT-GAGTTTTCAATGG--TTTGACTCGCTTTTTCC-TC--------------CAT---------------------CAAACACACACACACGCG------------------------------------CA-------------SizeHit CountTotal NormTotal
No Reads
droTak1
TAGTTTAT-----AGTTTTT-TATGCGCGCC------------------------CGTCGTTTTAAGCCG--AG---------CAGAA---------GAGGAGTAACAA-----AAGT-------------AA-------------TCCCAAAT---TGGCTGCCAAAAGTGCGGGTTCTG---------------------------------AAAG-------ATTA-ATAGCCAG-AA----------------AAGGCAGTTAATTGAAGA-GTGCAAAGAAAGTGGCCACCAAAAAG----------------------------TGA---GCAGATAATAAAGAAAATCAAA--AAAAAAGCTGAC-----------ACAAGTTCAAGGTGTAGAATTTGTGCGTG--------CGTGTGTGTGAGTGAGCCACAAGTTGTTTAAACAA-AAGTG--CAGAAATAATAG-CAAGATTGA-AGGAATTTCAACGGCA-AGTGCAGGAACTTGCAT-----------TCGGT------------------------------------------------G----TGCCAAATTTAAGGTTTTACCTTGG---------------------T-TTTTAAT-GAGTTTTTGGCTGCTTTTAACTC--TTTTTTT-TC--------------CAG---------------------CAAACACACACATATACA------------------------------------CA-------------SizeHit CountTotal NormTotal
No Reads
droEle1
TAGTTTTT-----CGATTTTTAATGC-CGC-------------------------CGTCGTTTTAAGCCG--AG---------AAAAA-----------GAAATTACAC-----AAAA----------------------------------ATGAATGGC---AAAAAGTGTGTGTTTCT---------------------------------AAAG-------TTGT-AAAGCCAAAAA-----------------AGGC---------AAAT-GTGCAAAAGAAGTGGTAACCAA-AA-----------------------------TGA---GTAGAAAATAAAGAAAATCATAAAAAAAGAGCTGAC-----------GCAAGTTCAAGGTGTA-----CG----CG--------TGTGTGTGTGAGTGAGCCACAAGTTGTTTAAACAA-AAGTG--CAGAAATAATAA-CAAATTTTT-AAGAATTTTATCAGGA-AGTGGAGGGAATGTCAT-----------TTTGT------------------------------------------------A----AGCCCAATGCGATGTTTTGCCTTGG---------------------T-TTTTAAT-GGGTTTTTGGCTGCTTTTAACTC--TTTTTTC--GAA----T---AT--CCA---------------------CACATATACATACACACA------------------------------------CA-------------SizeHit CountTotal NormTotal
No Reads
droRho1
TAGTTTTC------GATTTTTTCTAC-CGC-------------------------CGTGGTTTTAATTCTCGGC--------TTAAAA-----------GAAGTAACTA-----AAGAAGCAGAAAAGAAAAA------------GCCATTAAT---TAGCAGCAAAAAGTGCGTTATCTT---------------------------------AAAG-------TTGT-ATAGCCAAAAAAG---------------AGGC----------AAA-GTGCAAAGAAAGTGGCC----AAAA-----------------------------TGA---GCAGAAAATAAAGAAAATCTTA--TAAAAAGCTGAC-----------GCAAGTTCAAGGTGTA-----CG----CG--------TGTGTGTGTTAGTGTGCCACAAGTTGTTTAAACAA-AAATG--CAAAAA--GCAA-CAAATTCTT-AAGAATTTTAACAGCA-AGTCCAAGGAATTGCAT-----------TTAGT------------------------------------------------A----TGCCAAGTTTGAGATTTTTCCTTGG---------------------T-TTTTAAT-AAGTTTTTAGGTGCTTTTGACTC--TTTTTTC--C--------------GAA---------------------CAAACACA--CATACACA------------------------------------CA-------------SizeHit CountTotal NormTotal
No Reads
droFic1
TAGTTT-------GGTTTTTAACTGCGCGC-------------------------CGTCGTTTTTAGCCG--AC---------AAAAC----------CGAATTAACAA-----AAGAAGCGGCGAATAAAAG-------------TCAAAAAG---TTGCTGCT-TAAGTGTGTGATCTA---------------------------------A----------TCTA-A-AGCCCAAAA----------------AAGCCGTTTAATTGAATA-GTGCTAAGAAAGTGACCAGCGAA-C-----------------------------GGA---AAAGATAAT---AAAAAGCAT----AAGAAGCTGAC-----------GCAAGTTCAAGGTGTA---TTTGTGCATG--------TGTGTGTGCGATTGTGCTACAAATTGTTTAAATAA-AAGTG--CAAAAATTATAT-TATGTTCCT-AGGGATTACAGCAAAA-AGTGAAGCAAGTAGCAA-----------TAAGT------------------------------------------------T----AGCCAAAGTAAAGGTTTTGCCTTGG---------------------GTTTCTGAT-GAGTTTTTAGGTGCTTTTAACGT--TTTTT-------------------CAA---------------------CAAACACACGCATACACA------------------------------------CA-------------SizeHit CountTotal NormTotal
No Reads
droKik1
GC--------------------------TT-------------------------CGTCGTT-TGAGCCG--AG---------AATAA-----------ATAAAAATAA-----AAGAGGCAGCGAAAGAAGCACAGCGCCGAAGGGCA-AAGG---TGGCTGGT-AAAGTGTGTGTTTTA---------------------------------AAAGTGTATAAGTTT-ATGGCCTAAAAAGTGTTCATAAT-----------TCGATCACAAA-GTGCAAAGAAAGTGGCTCCC-AGGT-----------------------------TGA---GCAGAAAATAATGAAAAGCATA---AAAAAGCTGACGC--GCTGCCAGCAAGTTCAAGGTGTATAGCTTGTGC--G--------CGTGTGTATGTGTGTGCAACAAGTTGTTTACACTA-AAGTG--ACTAAATAACAAACAAATCCAG-TGGAAGTTT-GTAGC----------GAAATGTTT-----------TTACC------------------------------------------------G----TGCAGCAGTTAATGTTTTGCCTTGG---------------------T--TTTAAT-A----------T-CTTTTAACTC--TTTTTTT--C----------AC--CTA---------------------AAAACACACCCATACATA------------------------------------TA-------------SizeHit CountTotal NormTotal
No Reads
droAna3
AAGTTGAAGTGCTCG------CGAGAGCGGCCGCGACTGAGTTATTAACGGAAGGCTGCGTT-TCAGCCA--AG---------AAAAA-----------AT------CA-----AAGAAGCT-------------------------TA-AT---AATAG---CAAAAGGTGCC----CCA---------------------------------AAAG-------CTAATACA----------AGTGAGATATAA--AAGTG---------AGA-TCT--------G--------------TGAAAATAGTAATCTAATCAGATTCGAATTGG---AAAGTAAAGAGGAAGAGGCTGA-GAAAATAGCCG---------------AAGTTCAAGGTGTCGAAGGTGTGCGTGTGTG----TGTGTGTGTGTGTGTGCAACAAGTTGTTTAAACTG-AAATT--CAAA-------T-AGAATTCTG-TGGAATTTTTGCAACA-AGTGTAAATAAATATATAAACCGACCCTGTAGA------------------------------------------------GT---GGCAAAGTTTGTGATTTCGCTTTAT---------------------T--TATTGT-TCGTTTTCTGAGAGTTTTAACTC--TTTTTTT--TTTATTATATTTTCTTGA---------------------CGGACACACACACATATA------------------------------------GA-------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..GTTGAAGTGCTCG------CGAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG-TGGAATTTTTGCAACA-AGTGTA......................................................................................................................................................................................................................................................................................2511.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGACCCTGTAGA------------------------------------------------GT---G.....................................................................................................................................................................................................1911.001010000
.......................AGAGCGGCCGCGACTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
........................................GTTATTAACGGAAGGCTGCGTT-TCAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
......................................GAGTTATTAACGGAAGGCTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..........................GCGGCCGCGACTGAGTTATTAACGGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAAACCGACCCTGTAGA------------------------------------------------GT---GGC...................................................................................................................................................................................................2511.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................G----TGTGTGTGTGTGTGTGC..............................................................................................................................................................................................................................................................................................................................................................18200.153000003
........................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGTG----TGTGTGTGTGTGTGTGC..............................................................................................................................................................................................................................................................................................................................................................25100.101000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTG----TGTGTGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................18200.102200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG----TGTGTGTGTGTGTGTGCA.............................................................................................................................................................................................................................................................................................................................................................23200.051000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTGTG----TGTGTGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................21200.051000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTGTGTG----TGTGTGTGTGTGT..................................................................................................................................................................................................................................................................................................................................................................24200.051000001
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTG----TGTGTGTGTGTGTGTGCA.............................................................................................................................................................................................................................................................................................................................................................22200.051000001
droBip1
GAATGC--------------------------------------------------TGCGTT-TCAGCCA--AG---------AAAAA-----------T-------TA-----AAGAAGCT-------------------------TA-AT---AATAG---CAAAAGGTGCA----CTA---------------------------------AAAA-------TTAA-ACAACCATACACA---------TAAGCAAGTG---------AGA-TCT--------G--------------TGAATATAATAATCTAATCAGAATCGAATTGG---AAATTAAATAGAAAAAAGCTGA-GAATACAGCTG---------------AAGTTCAAGGTGTAGAAGGTGCGCGTG--------TGCGTGTGTGTGTGTGCAACAAGTTGTTAAAACTG-AAATT--GAATAA--------GAATTCGG-TGGAATTTTTGCAACA-AGTGTGAAGAAATACATAAACCAAACCCGTAGA------------------------------------------------CT---GCCAAAGTTTATGTTTTCGCTTTAT---------------------T--TATTGT-TCGTTTTTTGAGGGTTTTAACTC--TTTTATT--TT-----T-TTTTCTTGA---------------------CGGACACACAC--ATATA------------------------------------GA-------------SizeHit CountTotal NormTotal
No Reads
dp5
TTTTT----------------CCTTAGCTC-------------------------CGATC---------G--AACGAACGAAAGACAACAAGCAACT----------CC-----AATAAGAAGTGCCAAAAGA-------------TAG-CTAT---TGGCTATAAAGAGTGTGTGCTATTAACAAAATAATAAAATTTAATCATAATTAAAAG----CGTGAAGGTAAAAC-----------AGTGCAAAATAG--AATG---------AAAA-AGA--------G--------------GTGAAAAAGTAATAC----AAAATCGAACTACAGCCAAAAAAATACAG-------------CGAAGCTGACGACAGCCAGCAGCAAGTTCAAGGTGTA---CGCGCGTGTG--------TGTGTGTATGTATGAGCAACAAGTTGTTTGAAT-------GCAA-AAATTTATCA-TAATTTTGATTGAAATGCAAACAAAA-AGTAT-----------------------GCATAGTGTTGTTGACTAAA--GAATTATAATAATTTC------------------------------AAGT----------------GATTGTGCGGCTTTAAT-TC------GAGTTT-------TATTTAACTC--TTTTTCT--C--------------ACG---------------------CATTCACT--AATAC----------------------------------CAATGCAAGGGCCGC-----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...TT----------------CCTTAGCTC-------------------------CGATC---------G--AACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
....T----------------CCTTAGCTC-------------------------CGATC---------G--AACGAACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
droPer2
TTTTT----------------CCTTAGCTC-------------------------CGATC---------G--AACGAACGAAAGACAACAAGCAACT----------CC-----AATAAGAAGTGCCAAAAGA-------------TAG-CTAT---TGGCTATAAAGAGTGTGTGCTATTAACAAAATAATAAAATTTAATCATAATTAAAAG----CGTGAAGGTAAAAC-----------AGTGCAAAATAG--AATG---------AAAA-AGA--------G--------------GGGAAAAAGTAATAC----AAAATCGAACTACAGCCAAAAAAATACAG-------------CGAAGCTGACGACAGCCAGCAGCAAGTTCAAGGTGTA---CGCGCGTGTG--------TGTGTGTATGTATGAGCAACAAGTTGTTTGAAT-------GCAA-AAATTAATAA-TCATTCTGATTGAAATGCAAACAAAA-AGTAT-----------------------GCATAGTGTTGTTGACTAAA--GAATTATAATAATTTC------------------------------AAGT----------------GATTGTGCGGCTTTAAT-TC------GAGTTT-------TATTTAACTC--TTTTTCT--C--------------ACG---------------------CATTTACC--AATAC----------------------------------CAATGCAAGGGCCGC-----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAATAATTTC------------------------------AAGT----------------GATTGTGCGGC.............................................................................................................................................................2713.003300000
.........................AGCTC-------------------------CGATC---------G--AACGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droWil2
AAAAGA---------------------CGC-------------------------CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGCCAGCAAGTTCAAGGTGTTGCGGCTGTGTGTGTGTGCTCGCGAGTGTGTGTGTGTGCAACAAGTTGTTAAAACAA-AA---------------------------------------CGAAA-AGTGC-----------------------G-ATTTTGTTATTGGCCAAAAAGTGTTGTG----TTTCATTTGTAAAATTTATGTGCAGGCCAAGTTTATGTGTTTTCTGTGCTCACGGATTGAACCCTTTTTAC-TCCCGA---AGCCT-------TTTTTAACTC--TTTTTTC--CCTTTTCT-TCTTCTCTATGTTCATTCGTATGTACATCATATATATACATTTACACG------------------------------------CA-------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCTCGCGAGTGTGTGTGTGT................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................AGCAAGTTCAAGGTGTTGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
droVir3
TTTTTTGG-----CATTTTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCAACTC--TTTTTCT--TG-----T---TC--CCA---------------------CACACACACACACACATACAAAATCATACATACACACATGCACGCACACAAACACATAAATTGTAGTTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT--TG-----T---TC--CCA---------------------CACACACACACAC........................................................2511.001001000000000000000000000000000000000000000000000000000000000000

Generated: 05/18/2015 at 08:01 PM