ID:

dsi_1608

 Coordinate:

3r:14402718-14402915 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.6 -30.3 -30.2

Flybase annnotation

five_prime_UTR [3r_14402916_14403013_-]; exon [3r_14402916_14403013_-]; five_prime_UTR [3r_14402658_14402717_-]; exon [3r_14402481_14402717_-]; intron [3r_14402718_14402915_-]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTAAATAAACTTTTTAGGAGCAAAATCAATGAAATAAGTGAAAATAAAAGGTGAGTACCGTCTAAATAATCGATTTGTGGGCACCTTCATCGAGATGCGCTGCACTTTCCCCGAAACATGCCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGGCTCCATGACTACGCCTTTCCATTTGTGCCGGACCACACGCACACACCCACAACCATCGACGCCAACACGAACACACCACACGCAGAGTGCGAATAACGGAGAAACATCAAGACACACAGAGGAGCAGCAACTGGA
*****************************************************************....((((((((((((...........(((((((..(((.((((...))))..)))...........((....))............)))))))(((............))).........((((.((.......))))))..)))))))..))))).................*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
........ACTTTTTAGGAGCAAAAT................................................................................................................................................................................................................................................................................ 18 0 1 2.00 2 0 2 0 0 0 0 0
......................................................................................................................................................................................................................ACCATCGACGCCAACACGAACACAC........................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................AGTGCGAATAACGGAGAA................................ 18 0 1 1.00 1 0 0 0 1 0 0 0
.................................................................ATAATCGATTTGTGGGCAC...................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................TAAATAATCGATTTGTGGGCAT...................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................TAATCGATTTGTGGGCACCTT................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
................................................................AATAATCGATTTGTGGGCA....................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................ACGGAGAAACATCAAGACACACA................. 23 0 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................................GCAAACTGCGAATACCGGAGA................................. 21 3 4 0.50 2 0 0 0 0 2 0 0
..........................................................................................................................................................................................................................................................TGCGAATACCGGAGAATCTT............................ 20 3 2 0.50 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................................ACGCGCCCACAACCATCGACGT......................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................GTGCGAATAACGGAGG................................. 16 1 4 0.25 1 0 0 0 0 1 0 0
..........................................................................................................................................................................................TTTGCCGGACCACACGA............................................................................................... 17 2 15 0.13 2 0 0 2 0 0 0 0
......................................................................................................................................................................................CTTTCGTGCCGGACC..................................................................................................... 15 2 20 0.10 2 0 0 0 0 0 2 0
...........................................................................................................................................................................................................................................................GCGAATACCGGAGAA................................ 15 1 10 0.10 1 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................................................CTGCGAATACCGGAGA................................. 16 2 20 0.05 1 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................................ACTGCGAATACCGGAGAAT............................... 19 3 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

GATTTATTTGAAAAATCCTCGTTTTAGTTACTTTATTCACTTTTATTTTCCACTCATGGCAGATTTATTAGCTAAACACCCGTGGAAGTAGCTCTACGCGACGTGAAAGGGGCTTTGTACGGAATGAATTGACTTAAAAGGTGTTTTGTACTGCGTAGACGCCGAGGTACTGATGCGGAAAGGTAAACACGGCCTGGTGTGCGTGTGTGGGTGTTGGTAGCTGCGGTTGTGCTTGTGTGGTGTGCGTCTCACGCTTATTGCCTCTTTGTAGTTCTGTGTGTCTCCTCGTCGTTGACCT
***********************************************************....((((((((((((...........(((((((..(((.((((...))))..)))...........((....))............)))))))(((............))).........((((.((.......))))))..)))))))..))))).................***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
.............................................................................................CTACGCGACGTGAAAGGGGCT........................................................................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0
..................................................................................................................................GACTTAAAAGGTGTTTTGTAC................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................................................GGTACTGATGCGGAAAGGT.................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................TACGCGACGTGGAAGGGGCTT....................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................GCGGAAAGGTAAACACGGCCT....................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................AGCTAAACACCCGTGGAAGTA................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................GGGCTTTGTACGGAATGAATT........................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................AATGTGTGGGTGTTGGTAGCTG........................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
...................................................ACTCATGGCAGATTTATTAG................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................GAAGTAGCTCTAGGCGTCG................................................................................................................................................................................................... 19 2 3 0.67 2 0 0 1 0 1 0 0
..........................ATTACTTTATTCACTGTTAT............................................................................................................................................................................................................................................................ 20 2 3 0.33 1 0 0 0 0 0 1 0
......................................................................................................................................................................................................................TGGTAGCTGTGGTTGTG................................................................... 17 1 5 0.20 1 0 0 0 0 0 0 1
...............................................................................................................................................................................CGGAAAGGCAAAAACTGCCT....................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 1
..................................................................................................................................................................................................................GCTTTGGTCGCTGCGGTTGT.................................................................... 20 3 20 0.10 2 0 0 0 2 0 0 0
..................................................................................................CGACGTGCAAGGGGC......................................................................................................................................................................................... 15 1 11 0.09 1 0 0 0 1 0 0 0
....................................................................................GAAGTAGCTCTAGGCGTCGC.................................................................................................................................................................................................. 20 3 14 0.07 1 1 0 0 0 0 0 0
...................................................................................CGAAGTAGCTCTAGGCGTCG................................................................................................................................................................................................... 20 3 14 0.07 1 0 0 1 0 0 0 0
.............................................................................................................CGGCTTTGTACTGAAT............................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 1 0 0 0
..........................................................................................................................................................................................GCAGGGCCTGGTGTG................................................................................................. 15 2 20 0.05 1 0 0 0 1 0 0 0
.................................................................................................................................................................AATAGGTACTGATGCGGA....................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................TATGGCATCTTTGTAGGTC........................ 19 3 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:14402668-14402965 - dsi_1608 CT---AAATAAACTTT------TTAGGAGCAAAATCAATGAAATAAGTGAAAATAAAAGGTGAGTACCGTCTAAATAATCGATTTGTGGGCACCTTCATCGAGATGCGCTGCACTTTCCCCGAAACATGCCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGA-CCACACGCACA----CACCCACA------ACCATCGACGCCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A--------ACGGAGAAACATCA---AGAC-----------------------ACACAGAGGAGCA------GCAAC--------------------TGG-----------------A
droSec2 scaffold_0:15270171-15270469 - CT---AAATAAACTTT------TAAGGAGCAAAATCAATGAAATAAGTGAAAATAAAAGGTGAGTACCGTCAAAATAATCGATTTGTGGGCACCTTCATCGAGATGCGCTGCACTTTCCCCGAAACATGCCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGATCCACACGCACA----CACCCACA------ACCATCGACACCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A--------ACGGAGAAACATCT---AGAC-----------------------ACACAGAGGAGCA------GCAAC--------------------GGG-----------------A
dm3 chr3R:6680269-6680567 + CT---AAATAAACTTT------TAAGGAGTAAAATCAATGAAATAAGTGAAAATAAAAGGTGAGTACCGTCTAAATAATCGATTTGTGGGCGCCTCCATCGAAATGCGCTGCGCTTTCCCCAAAACATGCCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGATCCACACGCACA----CACGCGCA------ACCATTGACGCCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCAAAT-A--------ACGGAGAAACATCA---AGAC-----------------------ACGCAGAGGAGCA------GCAAC--------------------TGG-----------------A
droEre2 scaffold_4770:14930340-14930638 - CT---AAATAAACTTT------TAAGCAGTAAAGTCAATGAAATAAGTGGAAATAAAACGTGAGTACACTCGAAATAATCGATTTGTGTGCGCCTCCATCGAGATGCACTGCACTTTCCCCGAAACATGCCTTACTTAACTTCATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCTTTTGTGCCGGAACCACACGCACA----CACGCTCA------CCAATCGACGCCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAGT-A--------ACGGAGAAACAGCA---AGGC-----------------------ACGCAGAGGAGCA------GCAAC--------------------TGG-----------------A
droYak3 3R:10714609-10714907 + CT---AAATAAACTTT------TAAGCAGTAAAATCAATGAAATAAGTGAAAACAAAACGTGAGTATCCTCGAAACAATCGATTTGTGTGCGCCTCCAACGAGATGCACTGCACTTTCGCCGAAACATGCCTTACTTAACTGCATTTTCAACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGAACCACACGCACA----CACGCTCA------CCAATCGACGCCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A--------ACGGAGAAACAGCA---AGAC-----------------------ACGCAGAGGAGCA------GCAAC--------------------TGG-----------------A
droEug1 scf7180000409797:288973-289265 + CTA--AAATAAACTTA------AAAGCAGTAAAATCAATGAAATAAGTGGAAAAAAAACGTGAGTACCCTCTAAATAATCGATTTGTGGCCACTTCAAACGAAATGCGCACAAATTTCCAAGTAGCAAGTCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGA-CCACACACACA----CACTTAC--------TAATCGACGCCAACACA----------------------------------AC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGTGAAC-A-------AACGGAGAAACAGAA---AGAA-----------------------ACACAGAGGAGCA------GCAAT--------------------TGG-----------------G
droBia1 scf7180000302075:4097986-4098278 - TA---AAATAAACTTT------TGAGCCGTAAAATCAATGAAATAAGTGAAAAACCAGCGTGAGTACCCAGCGCATAATCGATTTGTGGCCACTTGCACCGAGGGGCGACCCCATTGGCCAGCAACAATGCTTACTTAACTGAATTTTCACCTAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGATCCACACGCACA----CACTCGCA------C----CGACGCCAACACGCA--C-----ACGGAC----------------GCCC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A-------AACGGAGAAACAGAG---AGAA-----------------------ACGCAGAGGAGCA----------------------------------------------------
droTak1 scf7180000414561:66533-66819 - CT---AAATAAACTTT------TAAGCAGTAAAATCAATGAAATAAGTGAAAAACCGGCGTGAGTACCCTCTAATAAATCGATTTGTGGACCCCTTGACCAAGAGGCGCCCCAATTTCGCGTTAACAATGCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGATCCACACGCACA----CACTCACA------C----CGACGCCAACACGAA-------------C----------------ACGC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A-------AACGGAGAAACAGAT---ATAA-----------------------ACGCAGAGGAGCA----------------------------------------------------
droEle1 scf7180000491080:3397410-3397717 + CT---AAATAAACTTT------AAAGCAGTAAAATCAATGAAATAACTGGAAAATAAGCGTGAGTACCCTCTGAATAATCGATTTGTGGCCGCCTTTGCCACTACACGGCCCAAATTCGCCACAACAATGCTTACTTAACTGAATTTTCCCCAAAACATGACGCATCTGCGGCGG-----CTCC-ATGGCTACGCCTTTCCATTTGTGCCGGAACCACACGCACATACACACTCTCACCG---ACCGTCGACGCCAACACAAA-------------C----------------GCAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GGGCGAAC-A-------AACGGAAATAC--TG---AGAA-----------------------ACCAAGAGGAGCA------GCAAC--------------------TGG-----------------A
droRho1 scf7180000779572:154850-155160 + CT---AAATAAACTTA------AAAGCAATAAAATCAATGAAATAAGTGGAAAATCAGCGTGAGTACCCTCTGAATAATCGATTTGTGACCGCTTAGACTGAGATGCGGCCCAAATTCGCCACAACAATGCTTACTTAACTGAATTTTCCCCAAAACATGACGCATCTGCGGCGG-----CTCC-ATGGCTACGCCTTTCCATTTGTGCCGGAACCACACGCACATACACACTCTCACCG---ACCATCGACGCCAACACAAA-------------C----------------GCAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GGGCGAAT-A-------AACGG-AAAACAGAG---AGAA-----------------------ATCAAGAGGAGCA------GCAAC--------------------TGGAC---------------A
droFic1 scf7180000453912:2585756-2586055 + CT---AAATAAACTTT------AAAGCAGCAAAATCAATGAAATAAGAGAAAAACTAACGTAAGTACCATCTGAATAATCGATTTTTGGCCACTTCGACCGAGATGTGACCCAGATTCCCCGTATCGAGCCTTACTTATGTGAATTTTCCACAAAACATGACGCATCTGCGGCGG-----CTCC-ATGACTACGCCTTTCCATTTGTGCCGGAACCTCACACACA----CTCGCACA-CA---AACTTTGACGCCAACACA----------------------------------AC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A-------AACGGAAAAACTTAA---GGAA-----------------------AACGAGAGGAGCA------GCAAG--------------------TGG-----------------A
droKik1 scf7180000302706:2299206-2299543 + AT---AAATAAACTTA------AATTCAGCAAAATCAATGAAATAAGTGAAACACCAACGTGAGTACCCTTCAAATAATCGATTTATGACCGCTTCGACCAATACGCGCACCAAACTCGTGGTTCCAATGCTTACTTAACTGAATTTTCCCCAAAACATGACGCATCTGCGGCGGCTCGGCTCC-ATGGCTACGCCTTTCCATTTATGCCGGAACC-CACATACA----CACGCAC-----------CTGGCTCCAACACACT----------GTCG----------------GTAC----------------------------------------------------------------------------------CACACGCAGA--GTAGA------------------------GTGCGA------------ACGGAAAAACAGAGTGAAGAAAACAAGCGAGGAGCAGAGCAGTAACAGAGAAGAGCATAGCAGGCAAG--------------------TGG-----------------A
droAna3 scaffold_12911:2922565-2922887 - CT---AAATAAACTTA------AAATCGGCAAAATCAATGAAATAACTGAAACACCTGGGTGAGTACCCTTCAAAAGATCGATTTGTGGTCGTCCCGACTCCGGGGCCCCGCAACTTCCTGGCCAGCAGGCTTACTAAATTGAATTTTCCACAAAACATGACGCATCTGCGGCGG-----TTCC-ATGGCTACGCCTTTCCATTCGTACCGGAACCACACACACA----TGCGGC-----GCATTAACCCACACCGTCTTA--CATTGGACCAAATC----------------GTAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAC-A--TCAGAGTCGGAAAAAC--TA---AGAG-----------------------CGCCACTGGAGCA------GGAAA--------------------AC------------AAATCAC
droBip1 scf7180000396714:182953-183271 + CT---AAATAAACTTT------AAATCGGCAAAATCAATGAAATAACTGAAACACCTGGGTGAGTACCTTTCAAAAGATCGATTTGTAGTCGTCTCGACTCCGGGGCCTCGCAGCTTCCGCTCCAACAGGCTTACTTAATTGAATTTTCCACAAAACATGACGCATCTGCGGCGG-----TTCC-ATGACTACGCCTTTCCATTTGTACCGGAACCACACACACA----TACGGC-----GCATTAACCCACACCGTCTTA--CATTGGACCGAATC----------------GTAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAC-G--GAGAAGACGGAAAAACTAAG---AGCG-----------------------ACAC----------------------------------------TGGAGAAGAAAAACCA----A
dp5 2:15297762-15298070 + TA---AAATAAACTTT------AAACCATTAAAATCAATGAAATAGTCGAACGATCAATGTACGTACCATCTAAAAAGTTCATTTGTTGTTGCATTTGACACAGCCCATTGCAAACTTCCACTAACATGGCCTACTTAACCGAATTTTCCACTAAACATGACGCATCTGCGG--------CTCCTATGACTACGCCTTT-CATTTGTGCCGGACACAT----ACA----CAACCTCA------AC-CTCGACCTCACCTCAAA----------TGCC----------------GCAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GACCGAGCTAAA------CCAGAGGAAAATCT---TCA------------------------GCGCAGGTTTGT----TTGCTATC--------------------TGGAC---------AGATAGA
droPer2 scaffold_0:5118262-5118563 - TA---AAATAAACTTT------AAACCATTAAAATCAATGAAATAGTCGAACTATCAATGTACGTACCATCTAAAAAGTTAATTTGTTGTTGCATTTGACGCAGCCCATTGCAAACTTCCACTAACATGGCCTACTTAACCGAATTTTCCACTAAACATGACGCATCTGCGG--------CTCCTATGACTACGCCTTT-CATTTGTGCCGGACACATAC----A----CAACCTCA------AC-CTCGACCTCACCTCAA---------CATGCC----------------GCAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GCCCGAGCTAAA------CCAGAGGAAAATCT---TCA------------------------GCGCAGGTTTGT----TTGCTATC--------------------TGG-----------------A
droWil2 scf2_1100000004921:2791096-2791320 + A-------------------------------AATAATTAAAATAAGCATAAAATAAATGTAAGTACTGTGTGAATAAACAATTTAAGGTTATTTTAACTTATATCTAATATTTTTATAAACTAACATGCAATACTTTATTGAATTTTCGACAAAACATGACGCATCTGCGGCGA-----CTCC-ACACATACACTTACACACACACAC-----CCACACGCACA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTCATGCAGT-------------------------------GCGTTAGT--------------------------------------------------------------------------CAAG--------------------TGT-----------------A
droVir3 scaffold_13047:18616598-18616932 + ------------------------------AAATTCTATTAAATCAGTGAAAAATTAACGTAAGTAGTCGCCAAATAGCTGATTTATACTCGTCTTAAGTCAAATATAATGTCCTTTTATACTAACGTTGGCTACTTTATTGAATTTTCCACAAAACATGACGCATCTGCAT--------C-----TGGATACGCCTTT-CATTTATGCCGGACACGCATACACA----CAAAACAA------AACAT---------------------------TT----------------GTAAAACACGCACACGCACACGCAAACACGCAGTGCGTACAGCTCTCTCACACACACACACACA------------CACACGCACACACAGGCATA--A-CAAGAGTCAAAATAGATACGAATTAGT-------------------------T---------------------------------------GCCACAAGCA------GCAAGTGCAC---CTACA---------------------------C
droMoj3 scaffold_6540:19803977-19804344 - ------------------------------AAAATCAATGAAATCAGTGTGAAATTAATGTAAGTATTTGCTCCGTGTATGATTTATGGCAACCTCAGCTCACATACAATGTTCTTTTGTATTAATGTTGGTTACTTTATTGAATTTTCAACAAAACATGACGCATCTGCAT--------T-----TGGATACGCCTTT-CATTTATGCCGGACACACACGCACA----CACACACA------TGAACACACATGCACACGCA-------------TACACCAAACAACATTTGTAAAACAC----TCGCACACGTAAACACGCAGTGCGTACTGCTC------AGACACACACACA------------AACAAGCACAATCAGGCAT-----CAGCAGTCAAAATAGATACAATATAGT-------------------------C----------GCC-----------------------ACCAGCAGCAGCA------GCAAGTGCACCTCCTACACAG----TCG-----------------A
droGri2 scaffold_14830:3750006-3750358 + CGAATAAATAAGCTATAAGAATTAACTCGTCAAATCAATGAAATCGGTCAGAAATTAATGTAAGTACTCGCTAAATAGATGATTTATTGCTGCCTTATATGCAAATAAATGACCATTCTCACTAACATTGGCTACTTTACTGAATTTTCAACAAAACATGACGCATCTGCAT--------C-----TGGATACGCCTTT-CATTTATGCCGGACACACACACAAA----C----TAA------AC---------------------------------------------------------------------------ACACAGTGCGTACAA-----ACACACACATAGACACACATACACACACAAACGCA----TACAAGCAGATAATAAAGATTGAAAATAGATTCAAGTTAGT-------------------------TGCCACA---AGCA-----------------------GCGCACAAGTGCA------GCAAC--------CCACACAACCACTGC-----------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CT---AAATAAACTTT------TTAGGAGCAAAATCAATGAAATAAGTGAAAATAAAAGGTGAGTACCGTCTAAATAATCGATTTGTGGGCACCTTCATCGAGATGCGCTGCACTTTCCCCGAAACATGCCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGA-CCACACGCACA----CACCCACA------ACCATCGACGCCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A--------ACGGAGAAACATCA---AGAC-----------------------ACACAGAGGAGCA------GCAAC--------------------TGG-----------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........ACTTT------TTAGGAGCAAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
...................................................................................................................................................................................................................................................ACCATCGACGCCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------........................................................................................................................................................................2511.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------GTGCGAAT-A--------ACGGAGAA.....................................................................................................1811.00100001000000000000
..........................................................................ATAATCGATTTGTGGGCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
.......................................................................TAAATAATCGATTTGTGGGCAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
...........................................................................TAATCGATTTGTGGGCACCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.........................................................................AATAATCGATTTGTGGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGAAACATCA---AGAC-----------------------ACACA............................................................2311.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGAAT-A--------ACGGAGG......................................................................................................1640.25100000000001000000
droSec2
CT---AAATAAACTTT------TAAGGAGCAAAATCAATGAAATAAGTGAAAATAAAAGGTGAGTACCGTCAAAATAATCGATTTGTGGGCACCTTCATCGAGATGCGCTGCACTTTCCCCGAAACATGCCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGATCCACACGCACA----CACCCACA------ACCATCGACACCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A--------ACGGAGAAACATCT---AGAC-----------------------ACACAGAGGAGCA------GCAAC--------------------GGG-----------------ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................AGTGAAAATAAAAGGTGAGTACCGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001
.................................................................................................ATCGAGATGCGCTGCACTTTCCCCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..............................................GTGAAAATAAAAGGTGAGTACCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..........................................ATAAGTGAAAATAAAAGGTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAGGAGCA------GCAAC--------------------GGG-----------------.1911.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCT---AGAC-----------------------ACACAGAGGAGCA------G.............................................2511.0010010
dm3
CT---AAATAAACTTT------TAAGGAGTAAAATCAATGAAATAAGTGAAAATAAAAGGTGAGTACCGTCTAAATAATCGATTTGTGGGCGCCTCCATCGAAATGCGCTGCGCTTTCCCCAAAACATGCCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGATCCACACGCACA----CACGCGCA------ACCATTGACGCCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCAAAT-A--------ACGGAGAAACATCA---AGAC-----------------------ACGCAGAGGAGCA------GCAAC--------------------TGG-----------------ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.........................................................AGGTGAGTACCGTCTAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droEre2
CT---AAATAAACTTT------TAAGCAGTAAAGTCAATGAAATAAGTGGAAATAAAACGTGAGTACACTCGAAATAATCGATTTGTGTGCGCCTCCATCGAGATGCACTGCACTTTCCCCGAAACATGCCTTACTTAACTTCATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCTTTTGTGCCGGAACCACACGCACA----CACGCTCA------CCAATCGACGCCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAGT-A--------ACGGAGAAACAGCA---AGGC-----------------------ACGCAGAGGAGCA------GCAAC--------------------TGG-----------------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................CCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCA................................................................................................................................................................2311.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGAGGAGCA------GCAAC--------------------TG...................2011.0010000010
.....................................ATGAAATAAGTGGAAATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCA---AGGC-----------------------ACGCAGAGGAGCA------GC............................................2611.0010000100
droYak3
CT---AAATAAACTTT------TAAGCAGTAAAATCAATGAAATAAGTGAAAACAAAACGTGAGTATCCTCGAAACAATCGATTTGTGTGCGCCTCCAACGAGATGCACTGCACTTTCGCCGAAACATGCCTTACTTAACTGCATTTTCAACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGAACCACACGCACA----CACGCTCA------CCAATCGACGCCAACACGAA-------------C----------------ACAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A--------ACGGAGAAACAGCA---AGAC-----------------------ACGCAGAGGAGCA------GCAAC--------------------TGG-----------------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACAGCA---AGAC-----------------------ACGCAGAGGAGCA------G.............................................2711.00100000010000
...........................AGTAAAATCAATGAAATAAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..................................................................................................................................................................GCATCTGCGG--------CTCC-ATGACTACGCCTTC............................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------GTGCGAAT-A--------ACGGAGAAACA..................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---AGAC-----------------------ACGCAGAGGAGC.....................................................2011.00100100000000
...........................................................GTGAGTATCCTCGAAACAATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001000000
droEug1
CTA--AAATAAACTTA------AAAGCAGTAAAATCAATGAAATAAGTGGAAAAAAAACGTGAGTACCCTCTAAATAATCGATTTGTGGCCACTTCAAACGAAATGCGCACAAATTTCCAAGTAGCAAGTCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGA-CCACACACACA----CACTTAC--------TAATCGACGCCAACACA----------------------------------AC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGTGAAC-A-------AACGGAGAAACAGAA---AGAA-----------------------ACACAGAGGAGCA------GCAAT--------------------TGG-----------------GSizeHit CountTotal NormTotal
No Reads
droBia1
TA---AAATAAACTTT------TGAGCCGTAAAATCAATGAAATAAGTGAAAAACCAGCGTGAGTACCCAGCGCATAATCGATTTGTGGCCACTTGCACCGAGGGGCGACCCCATTGGCCAGCAACAATGCTTACTTAACTGAATTTTCACCTAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGATCCACACGCACA----CACTCGCA------C----CGACGCCAACACGCA--C-----ACGGAC----------------GCCC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A-------AACGGAGAAACAGAG---AGAA-----------------------ACGCAGAGGAGCA----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CT---AAATAAACTTT------TAAGCAGTAAAATCAATGAAATAAGTGAAAAACCGGCGTGAGTACCCTCTAATAAATCGATTTGTGGACCCCTTGACCAAGAGGCGCCCCAATTTCGCGTTAACAATGCTTACTTAACTGAATTTTCCACAAAACATGACGCATCTGCGG--------CTCC-ATGACTACGCCTTTCCATTTGTGCCGGATCCACACGCACA----CACTCACA------C----CGACGCCAACACGAA-------------C----------------ACGC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A-------AACGGAGAAACAGAT---ATAA-----------------------ACGCAGAGGAGCA----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CT---AAATAAACTTT------AAAGCAGTAAAATCAATGAAATAACTGGAAAATAAGCGTGAGTACCCTCTGAATAATCGATTTGTGGCCGCCTTTGCCACTACACGGCCCAAATTCGCCACAACAATGCTTACTTAACTGAATTTTCCCCAAAACATGACGCATCTGCGGCGG-----CTCC-ATGGCTACGCCTTTCCATTTGTGCCGGAACCACACGCACATACACACTCTCACCG---ACCGTCGACGCCAACACAAA-------------C----------------GCAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GGGCGAAC-A-------AACGGAAATAC--TG---AGAA-----------------------ACCAAGAGGAGCA------GCAAC--------------------TGG-----------------ASizeHit CountTotal NormTotal
No Reads
droRho1
CT---AAATAAACTTA------AAAGCAATAAAATCAATGAAATAAGTGGAAAATCAGCGTGAGTACCCTCTGAATAATCGATTTGTGACCGCTTAGACTGAGATGCGGCCCAAATTCGCCACAACAATGCTTACTTAACTGAATTTTCCCCAAAACATGACGCATCTGCGGCGG-----CTCC-ATGGCTACGCCTTTCCATTTGTGCCGGAACCACACGCACATACACACTCTCACCG---ACCATCGACGCCAACACAAA-------------C----------------GCAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GGGCGAAT-A-------AACGG-AAAACAGAG---AGAA-----------------------ATCAAGAGGAGCA------GCAAC--------------------TGGAC---------------ASizeHit CountTotal NormTotal
No Reads
droFic1
CT---AAATAAACTTT------AAAGCAGCAAAATCAATGAAATAAGAGAAAAACTAACGTAAGTACCATCTGAATAATCGATTTTTGGCCACTTCGACCGAGATGTGACCCAGATTCCCCGTATCGAGCCTTACTTATGTGAATTTTCCACAAAACATGACGCATCTGCGGCGG-----CTCC-ATGACTACGCCTTTCCATTTGTGCCGGAACCTCACACACA----CTCGCACA-CA---AACTTTGACGCCAACACA----------------------------------AC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAT-A-------AACGGAAAAACTTAA---GGAA-----------------------AACGAGAGGAGCA------GCAAG--------------------TGG-----------------ASizeHit CountTotal NormTotal
No Reads
droKik1
AT---AAATAAACTTA------AATTCAGCAAAATCAATGAAATAAGTGAAACACCAACGTGAGTACCCTTCAAATAATCGATTTATGACCGCTTCGACCAATACGCGCACCAAACTCGTGGTTCCAATGCTTACTTAACTGAATTTTCCCCAAAACATGACGCATCTGCGGCGGCTCGGCTCC-ATGGCTACGCCTTTCCATTTATGCCGGAACC-CACATACA----CACGCAC-----------CTGGCTCCAACACACT----------GTCG----------------GTAC----------------------------------------------------------------------------------CACACGCAGA--GTAGA------------------------GTGCGA------------ACGGAAAAACAGAGTGAAGAAAACAAGCGAGGAGCAGAGCAGTAACAGAGAAGAGCATAGCAGGCAAG--------------------TGG-----------------ASizeHit CountTotal NormTotal
No Reads
droAna3
CT---AAATAAACTTA------AAATCGGCAAAATCAATGAAATAACTGAAACACCTGGGTGAGTACCCTTCAAAAGATCGATTTGTGGTCGTCCCGACTCCGGGGCCCCGCAACTTCCTGGCCAGCAGGCTTACTAAATTGAATTTTCCACAAAACATGACGCATCTGCGGCGG-----TTCC-ATGGCTACGCCTTTCCATTCGTACCGGAACCACACACACA----TGCGGC-----GCATTAACCCACACCGTCTTA--CATTGGACCAAATC----------------GTAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAC-A--TCAGAGTCGGAAAAAC--TA---AGAG-----------------------CGCCACTGGAGCA------GGAAA--------------------AC------------AAATCACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGAAAAAC--TA---AGAG-----------------------CGCC.............................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................GA-------------------------------GTGCGAAC-A--TCAGAGT............................................................................................................1811.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGAAC-A--TCAGAGTCGGA........................................................................................................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTCGGAAAAAC--TA---AGAG-----------------------C................................................................2111.001010000
droBip1
CT---AAATAAACTTT------AAATCGGCAAAATCAATGAAATAACTGAAACACCTGGGTGAGTACCTTTCAAAAGATCGATTTGTAGTCGTCTCGACTCCGGGGCCTCGCAGCTTCCGCTCCAACAGGCTTACTTAATTGAATTTTCCACAAAACATGACGCATCTGCGGCGG-----TTCC-ATGACTACGCCTTTCCATTTGTACCGGAACCACACACACA----TACGGC-----GCATTAACCCACACCGTCTTA--CATTGGACCGAATC----------------GTAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GTGCGAAC-G--GAGAAGACGGAAAAACTAAG---AGCG-----------------------ACAC----------------------------------------TGGAGAAGAAAAACCA----ASizeHit CountTotal NormTotal
No Reads
dp5
TA---AAATAAACTTT------AAACCATTAAAATCAATGAAATAGTCGAACGATCAATGTACGTACCATCTAAAAAGTTCATTTGTTGTTGCATTTGACACAGCCCATTGCAAACTTCCACTAACATGGCCTACTTAACCGAATTTTCCACTAAACATGACGCATCTGCGG--------CTCCTATGACTACGCCTTT-CATTTGTGCCGGACACAT----ACA----CAACCTCA------AC-CTCGACCTCACCTCAAA----------TGCC----------------GCAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GACCGAGCTAAA------CCAGAGGAAAATCT---TCA------------------------GCGCAGGTTTGT----TTGCTATC--------------------TGGAC---------AGATAGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------CCAGAGGAAAATCT---TCA------------------------GCGC.............................................................2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGT----TTGCTATC--------------------TGGAC---------AGATAGA2511.0010000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT---TCA------------------------GCGCAGGTTTGT----TTGCTAT..........................................2511.0010100000000
..............................AAAATCAATGAAATAGTCGAACGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
................................AATCAATGAAATAGTCGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---TCA------------------------GCGCAGGTTTGT----TTG..............................................2011.0010000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGT----TTGCTATC--------------------TGGAC---------A......2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGTTTGT----TTGCTATC--------------------TGGAC---------.......2311.0010100000000
.................................ATCAATGAAATAGTCGAACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................TGCC----------------GCAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GACCGAGC.......................................................................................................................2611.0010000000010
droPer2
TA---AAATAAACTTT------AAACCATTAAAATCAATGAAATAGTCGAACTATCAATGTACGTACCATCTAAAAAGTTAATTTGTTGTTGCATTTGACGCAGCCCATTGCAAACTTCCACTAACATGGCCTACTTAACCGAATTTTCCACTAAACATGACGCATCTGCGG--------CTCCTATGACTACGCCTTT-CATTTGTGCCGGACACATAC----A----CAACCTCA------AC-CTCGACCTCACCTCAA---------CATGCC----------------GCAC----------------------------------------------------------------------------------CACACGCAGA-------------------------------GCCCGAGCTAAA------CCAGAGGAAAATCT---TCA------------------------GCGCAGGTTTGT----TTGCTATC--------------------TGG-----------------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................ATCAATGAAATAGTCGAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAA------CCAGAGGAAAATCT---TCA------------------------GC...............................................................2511.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCT---TCA------------------------GCGCAGGTTTGT----TTGCTATC--------------------TG...................2911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---TCA------------------------GCGCAGGTTTGT----TTGCTATC--------------------.....................2411.001010000
...................................CAATGAAATAGTCGAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droWil2
A-------------------------------AATAATTAAAATAAGCATAAAATAAATGTAAGTACTGTGTGAATAAACAATTTAAGGTTATTTTAACTTATATCTAATATTTTTATAAACTAACATGCAATACTTTATTGAATTTTCGACAAAACATGACGCATCTGCGGCGA-----CTCC-ACACATACACTTACACACACACAC-----CCACACGCACA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTCATGCAGT-------------------------------GCGTTAGT--------------------------------------------------------------------------CAAG--------------------TGT-----------------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................TACTTTATTGAATTTTCGACAAAACA.....................................................................................................................................................................................................................................................................................................................................................................................................2619.00909000
...............................................................................................................................................ATTTTCGACAAAACATGACGCATC............................................................................................................................................................................................................................................................................................................................................................................................2418.00806020
................................................................TACTGTGTGAATAAACAATTTAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.00704030
.................................................................................................................................................TTTCGACAAAACATGACGCATCTGCGG.......................................................................................................................................................................................................................................................................................................................................................................................2715.00505000
.....................................................................................................................................................................TCTGCGGCGA-----CTCC-ACACATACACT...............................................................................................................................................................................................................................................................................................................................................................2514.00413000
.................................................TAAAATAAATGTAAGTACTGTGTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00403010
..............................................................................................................................................................TGACGCATCTGCGGCGA-----CTCC-ACACA.....................................................................................................................................................................................................................................................................................................................................................................2614.00404000
..............................................................................................................................................................TGACGCATCTGCGGCGA-----CTCC-ACA.......................................................................................................................................................................................................................................................................................................................................................................2414.00404000
..........................................................................................................................................................................................................................................TCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTCATGCAGT-------------------------------GCGT...........................................................................................................................2513.00303000
.......................................................................................................................................................................................................................CACACGCACA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------C.......................................................................................................................................................................2713.00303000
................................................................................................................................................TTTTCGACAAAACATGACGCATCTGCGG.......................................................................................................................................................................................................................................................................................................................................................................................2813.00303000
.....................................................................................................................................................................................TCC-ACACATACACTTACACACACACAC-----C............................................................................................................................................................................................................................................................................................................................................2813.00303000
...........................................................................................................................................................................................................................CGCACA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTCA....................................................................................................................................................................2613.00303000
.......................................................................................................................................................................................................................CACACGCACA----CACTCTCA------T----CCACG......................................................................................................................................................................................................................................................................................................2412.00202000
..........................................................TGTAAGTACTGTGTGAATAAACAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00202000
.......................................................................................................................................................................TGCGGCGA-----CTCC-ACACATACACTTACAC..........................................................................................................................................................................................................................................................................................................................................................2812.00202000
..................................................................................................................................................TTCGACAAAACATGACGCATCTGCGG.......................................................................................................................................................................................................................................................................................................................................................................................2612.00202000
............................................................................................................................................................................................................................GCACA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTC.....................................................................................................................................................................2412.00202000
................................................................TACTGTGTGAATAAACAATTTAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00202000
...................................................................................................................................................................CATCTGCGGCGA-----CTCC-ACACATACACT...............................................................................................................................................................................................................................................................................................................................................................2712.00202000
.......................................................................................................................................................................................................................CACACGCACA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------........................................................................................................................................................................2612.00202000
.................................................................................................................................................TTTCGACAAAACATGACGCATCTGCGGC......................................................................................................................................................................................................................................................................................................................................................................................2812.00202000
................................................................TACTGTGTGAATAAACAATTTAAGGTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00202000
.........................................................................................................................................TATTGAATTTTCGACAAAACATGACGC...............................................................................................................................................................................................................................................................................................................................................................................................2712.00202000
..............................................................................................................................................................TGACGCATCTGCGGCGA-----CTCC-ACAC......................................................................................................................................................................................................................................................................................................................................................................2512.00202000
...............................................................................................................................................................................................ACACTTACACACACACAC-----CCACACGC.....................................................................................................................................................................................................................................................................................................................................2612.00202000
...........................................................................................................................................................................................................................CGCACA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTC.....................................................................................................................................................................2512.00202000
.......................................................................................................................................................................TGCGGCGA-----CTCC-ACACATACACTTACA...........................................................................................................................................................................................................................................................................................................................................................2712.00202000
...........................................................................................................................................................................................................................CGCACA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CT......................................................................................................................................................................2412.00202000
.........................................................................................................................................................................CGGCGA-----CTCC-ACACATACACTTACACA.........................................................................................................................................................................................................................................................................................................................................................2711.00101000
................................................................................................................................................TTTTCGACAAAACATGACGCATCTGCG........................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
................................................................................................................................................TTTTCGACAAAACATGACGCATC............................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.....................................................................TGTGAATAAACAATTTAAGGTTATTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
........................................................................................................................................................................GCGGCGA-----CTCC-ACACATACACTTACA...........................................................................................................................................................................................................................................................................................................................................................2611.00101000
..............................................................................................................................................................................................TACACTTACACACACACAC-----CCACACG......................................................................................................................................................................................................................................................................................................................................2611.00101000
...........................................TAAGCATAAAATAAATGTAAGTACTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
.................................................................................................................................................TTTCGACAAAACATGACGCATCTGCGGT......................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
.......................................................................................................................................................................TGCGGCGA-----CTCC-ACACATACA.................................................................................................................................................................................................................................................................................................................................................................2111.00101000
............................................................................................................................................TGAATTTTCGACAAAACATGACGCATC............................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
..........................................................................................................................................................AACATGACGCATCTGCGGCGA-----CTCC-..........................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..............................................................................................................................................................................................TACACTTACACACACACAC-----CCACAC.......................................................................................................................................................................................................................................................................................................................................2511.00101000
.........................................................................................................................................TATTGAATTTTCGACAAAACATGACG................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
........................................................................................................................................................................................................................................TCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTCATGCAGT-------------------------------GC.............................................................................................................................2511.00101000
............................................................TAAGTACTGTGTGAATAAACAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
..........................................................................................................................................ATTGAATTTTCGACAAAACATGACGCA..............................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.........................................................................................................................................TATTGAATTTTCGACAAAACATGACGCA..............................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
............................................AAGCATAAAATAAATGTAAGTACTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.............................................................................................................................................GAATTTTCGACAAAACATGACGCATC............................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.................................................TAAAATAAATGTAAGTACTGTGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..........................................................................................................................................................AACATGACGCATCTGCGGCGA-----CTCC-AC........................................................................................................................................................................................................................................................................................................................................................................2711.00101000
..........................................................................................................................................ATTGAATTTTCGACAAAACATGACG................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.................................................................ACTGTGTGAATAAACAATTTAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.......................................................................................................................................................CAAAACATGACGCATCTGCGGCGA-----CT.............................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...............................................................................................................................................................GACGCATCTGCGGCGA-----CTCC-ACA.......................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.................................................................................................................................................................CGCATCTGCGGCGA-----CTCC-ACACATACC.................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.........................................................................................................................................................AAACATGACGCATCTGCGGCGA-----CTCC-A.........................................................................................................................................................................................................................................................................................................................................................................2711.00101000
...............................................................................................................................TGCAATACTTTATTGAATTTTCGACA..........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...............................................................................................................................................................................................................................CA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTCATGCAGT-------------------------------...............................................................................................................................2811.00101000
..........................................................................................................................................................................................................................ACGCACA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CT......................................................................................................................................................................2511.00101000
...................................................................................................................................................TCGACAAAACATGACGCATCTGCG........................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
....................................................................................................................................................................................................TACACACACACAC-----CCACACGCACA----..............................................................................................................................................................................................................................................................................................................................2411.00101000
...............................................................................................................................................................................................................AC-----CCACACGCACA----CACTCTCA------T----CCA........................................................................................................................................................................................................................................................................................................2511.00101000
..........................................................................................................................................................AACATGACGCATCTGCGGCGA-----CTCC-A.........................................................................................................................................................................................................................................................................................................................................................................2611.00101000
......................................................................GTGAATAAACAATTTAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..............................................................................................................................................................................................TACACTTACACACACACAC-----CCACACGC.....................................................................................................................................................................................................................................................................................................................................2711.00101000
........................................................................................................................................................................................................................................................................................................C----------------------------------------------------------------------------------CTCATGCAGT-------------------------------GCGTTAGT--------------------------------------------------------------------------CAAG--------------------TGT-----------------A2711.00101000
.........................................................................................................................................................AAACATGACGCATCTGCGGCGA-----CTC............................................................................................................................................................................................................................................................................................................................................................................2511.00101000
................................................................................................................................................................................................................................A----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTCATGCAGT-------------------------------G..............................................................................................................................2811.00101000
..................................................................................................................................................................GCATCTGCGGCGA-----CTCC-ACACATACACT...............................................................................................................................................................................................................................................................................................................................................................2811.00101000
..............................................................................................................................................AATTTTCGACAAAACATGACGCATC............................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
....................................................................................................................................................CGACAAAACATGACGCATCTGCGGCGA-----C..............................................................................................................................................................................................................................................................................................................................................................................2811.00101000
.................................................TAAAATAAATGTAAGTACTGTGTGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
...........................................................GTAAGTACTGTGTGAATAAACAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...........................................................................................................................................................................................................................CGCACA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTCATG..................................................................................................................................................................2811.00101000
.................................................................................................................................................TTTCGACAAAACATGACGCATCTG..........................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
......................................................................................................................................................................................CC-ACACATACACTTACACACACAC....................................................................................................................................................................................................................................................................................................................................................2411.00101000
...............................................................................................................................................ATTTTCGACAAAACATGACGCATCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
................................................................................................................................GCAATACTTTATTGAATTTTCGACA..........................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...............................................................................................................................................................................................................................CA----CACTCTCA------T----CCACGC------------------------------------------C----------------------------------------------------------------------------------CTCATGCAG...............................................................................................................................................................2711.00101000
.............................................................................................................................................GAATTTTCGACAAAACATGACGCA..............................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.......................................................................................................................................................................TGCGGCGA-----CTCC-ACACATACACTTA.............................................................................................................................................................................................................................................................................................................................................................2511.00101000
.....................................................................................................................................................................................TCC-ACACATACACTTACACACAC......................................................................................................................................................................................................................................................................................................................................................2311.00101000
.......................................................................................................................................................................TGCGGCGA-----CTCC-ACACATACACTTACACA.........................................................................................................................................................................................................................................................................................................................................................2911.00101000
............................................................TAAGTACTGTGTGAATAAACAATTTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.......................................................................................................................................................................TGCGGCGA-----CTCC-ACACATACACTTAC............................................................................................................................................................................................................................................................................................................................................................2611.00101000
droVir3
------------------------------AAATTCTATTAAATCAGTGAAAAATTAACGTAAGTAGTCGCCAAATAGCTGATTTATACTCGTCTTAAGTCAAATATAATGTCCTTTTATACTAACGTTGGCTACTTTATTGAATTTTCCACAAAACATGACGCATCTGCAT--------C-----TGGATACGCCTTT-CATTTATGCCGGACACGCATACACA----CAAAACAA------AACAT---------------------------TT----------------GTAAAACACGCACACGCACACGCAAACACGCAGTGCGTACAGCTCTCTCACACACACACACACA------------CACACGCACACACAGGCATA--A-CAAGAGTCAAAATAGATACGAATTAGT-------------------------T---------------------------------------GCCACAAGCA------GCAAGTGCAC---CTACA---------------------------CSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................T--------C-----TGGATACGCCTTT-CATTTATGCC.................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACGAATTAGT-------------------------T---------------------------------------GCCACAAGCA------GCAAG.........................................2711.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................TACTAACGTTGGCTACTTTATTGAATT.................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................ATTTTCCACAAAACATGACGCATCTG..........................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
...................................CTATTAAATCAGTGAAAAATTAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CACACGCACACGCAAACACGCAG.............................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
...........................................................GTAAGTAGTCGCCAAATAGCTGATTTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................TTTATACTAACGTTGGCTACTTTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
...........................................................GTAAGTAGTCGCCAAATAGCTGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ACACACACACA------------CACACGCAC.........................................................................................................................................................................20200.051000000000000000000000000000100000000000000000000000000000000000
droMoj3
------------------------------AAAATCAATGAAATCAGTGTGAAATTAATGTAAGTATTTGCTCCGTGTATGATTTATGGCAACCTCAGCTCACATACAATGTTCTTTTGTATTAATGTTGGTTACTTTATTGAATTTTCAACAAAACATGACGCATCTGCAT--------T-----TGGATACGCCTTT-CATTTATGCCGGACACACACGCACA----CACACACA------TGAACACACATGCACACGCA-------------TACACCAAACAACATTTGTAAAACAC----TCGCACACGTAAACACGCAGTGCGTACTGCTC------AGACACACACACA------------AACAAGCACAATCAGGCAT-----CAGCAGTCAAAATAGATACAATATAGT-------------------------C----------GCC-----------------------ACCAGCAGCAGCA------GCAAGTGCACCTCCTACACAG----TCG-----------------ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................TGCGTACTGCTC------AGACACACACACA------------..................................................................................................................................................................................2511.001010000
droGri2
CGAATAAATAAGCTATAAGAATTAACTCGTCAAATCAATGAAATCGGTCAGAAATTAATGTAAGTACTCGCTAAATAGATGATTTATTGCTGCCTTATATGCAAATAAATGACCATTCTCACTAACATTGGCTACTTTACTGAATTTTCAACAAAACATGACGCATCTGCAT--------C-----TGGATACGCCTTT-CATTTATGCCGGACACACACACAAA----C----TAA------AC---------------------------------------------------------------------------ACACAGTGCGTACAA-----ACACACACATAGACACACATACACACACAAACGCA----TACAAGCAGATAATAAAGATTGAAAATAGATTCAAGTTAGT-------------------------TGCCACA---AGCA-----------------------GCGCACAAGTGCA------GCAAC--------CCACACAACCACTGC-----------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAAGTGCA------GCAAC--------CCACACAACC.......................2611.00110
..........................................................................................................................................................................................................................................................................................................................................................ACATAGACACACATACACA......................................................................................................................................................................................1980.13110

Generated: 05/18/2015 at 05:03 PM