ID:dsi_16044 |
Coordinate:3l:16501236-16501385 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -39.9 | -39.0 | -39.0 |
 |
 |
 |
intergenic
No Repeatable elements found
|
ATTTGATGCATAAACTTTGATCATCTCAATATAATAAAGAACCAAAAAAAGTATTTCCGCATCCAAAATCAGTAGTTGAGAGACGCCGGCGCTGATTAAAAGAAACCAGTGCCCGTCTCCAATTATAAACATATTGTTGTTTAGAGCAATTCACCTGTAAACAATATGGAAAAGTGTACCCAAATGGCTTCTGTTTTCCTAGTGTGTAAATTGCAACAGCGGGTAACAGCGAGGAACTAGCGACCCACAT
**************************************************.....................(((((((.((((((..(((((((............))))))))))))))))))))........(((((((((.((........)).))))))))).((((((......((....))......)))))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
M053 female body |
SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................AGTAGTTGAGAGACGCCGGCT............................................................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ......................................................................TGTAGTTGAGAGACGCCGGCGCTGAAA......................................................................................................................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................................TGTACCCAAATGGCTTCTGTTTT..................................................... | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................................................................GCTACTGTTTTCGTAGTG.............................................. | 18 | 2 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 |
| ................................................................................................................................................................................................................AATTGCAACTACGGGTAACG...................... | 20 | 3 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...........AAACGTTGATCAGCTCGATA........................................................................................................................................................................................................................... | 20 | 3 | 8 | 0.13 | 1 | 0 | 0 | 0 | 1 | 0 |
| .............ACTTTGATCATCACAGT............................................................................................................................................................................................................................ | 17 | 2 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 |
| .........................................................................................................................................................GCTGTTAACAATATGGAA............................................................................... | 18 | 2 | 15 | 0.07 | 1 | 0 | 0 | 0 | 0 | 1 |
| ..............................ATACTAAAGAACCAA............................................................................................................................................................................................................. | 15 | 1 | 19 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................................................................................................GTTTAGCGCAAGTCAC................................................................................................ | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..................................................................................................AAAGAAACCAGAGCC......................................................................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 |
|
TAAACTACGTATTTGAAACTAGTAGAGTTATATTATTTCTTGGTTTTTTTCATAAAGGCGTAGGTTTTAGTCATCAACTCTCTGCGGCCGCGACTAATTTTCTTTGGTCACGGGCAGAGGTTAATATTTGTATAACAACAAATCTCGTTAAGTGGACATTTGTTATACCTTTTCACATGGGTTTACCGAAGACAAAAGGATCACACATTTAACGTTGTCGCCCATTGTCGCTCCTTGATCGCTGGGTGTA
**************************************************.....................(((((((.((((((..(((((((............))))))))))))))))))))........(((((((((.((........)).))))))))).((((((......((....))......)))))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................ATTGGTCACGGGCAAAGGCTA............................................................................................................................... | 21 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 |
| ..............................................................................TCTCTGTGGCCGCAACT........................................................................................................................................................... | 17 | 2 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................GGATTTAGTCATCAA............................................................................................................................................................................. | 15 | 1 | 11 | 0.09 | 1 | 0 | 0 | 0 | 1 |
| .......................................................................................................................................................................................................................................TCCTCGATTGCTGGGTG.. | 17 | 2 | 11 | 0.09 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................................GTCTATGCTTGATCGCTG...... | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
| ...................................................................................................................................................................................................................................TCTATGCTTGATCGCTGG..... | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
| ......................................................................................................................................................................................................................................CTCCTTGCTCGCTGGT.... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
| ..................................................TATAAAGGCGTAGGT......................................................................................................................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 05:08 AM