ID:

dsi_16034

 Coordinate:

3r:15629870-15630019 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.6 -12.1 -12.1

Flybase annnotation

intron [3r_15629770_15629828_+]; CDS [3r_15629829_15629869_+]; exon [3r_15629829_15629869_+]; intron [3r_15629870_15630247_+]

No Repeatable elements found

Sense Strand Reads

---------#########################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTTCTTCAGGCCCCAAGACGATATTCTTCTGGGCTCCAATCGTTAAGTGGGTAAGTTTTGGAACCACTTGCATAACCATGAACCCTGCGTCCTTAGCCAATTCCCATTATCATCGAGCTGATAAACAAATCTGTGGGCGAATATTGTGTTTTATTATTATTTGTTTAGTTCTCGGCAAACCTGTTCAAGCCCGCGATAAATTAGTACATATATATATAACATTTTCCTCTCCACGCGCGAGATTCTGATA
*******************************************************************************************.....................(((((....(((((((((..((((..(((((...)))))..)))).)))))))))...)))))................*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M025
embryo
 M053
female body
 O002
Head
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 SRR553488
RT_0-2 hours eggs
.......................................................................................................................GATAATCAAATCGGTGGGC................................................................................................................ 19 2 2 19.00 38 37 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................GATAATCAAATCGGTGGGCC............................................................................................................... 20 3 8 4.50 36 35 1 0 0 0 0 0 0 0 0 0
...............AGACGATATTCTTCTGGGCT....................................................................................................................................................................................................................... 20 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
...........................................................................................CTTAGCCAATTCCCATTATCATCGAGCT................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CTCGGCAAACCTGTTCAAGCC........................................................... 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................CGATAATCAAATCGGTGGGC................................................................................................................ 20 3 8 1.88 15 15 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TTCGTTGTCGACAAACCTG................................................................... 19 3 13 1.23 16 0 15 1 0 0 0 0 0 0 0 0
..............AAGACGATATTCTTCTGGGCT....................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................ATAACCATGAACCCTGCGTCCT............................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............CAAGACGATATTCTTCTGGGCTC...................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TTAGTTCTCGGCAAACCTGT.................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GTTTAGTTCTCGGCAAACCTG................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................ATATTCTTCTGGGCTCCA.................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TTGTTTAGTTCTCGGCAAACCT.................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............CAAGACGATATTCTTCTGGGCT....................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TTATTATTATTTGTTTAGTTCTCGGC.......................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATATAACATTTTCCTCTC................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................GACGATATTCTTCTGGGCT....................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................GACGATATTCTTCTGGGCTC...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................TAGTTCTCGGCAAACCTGTTCAAGCCC.......................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................TGCATAACCATGAACCCTGCGTCCTT............................................................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................TCTGGGCTCCAATCGTTAAGT.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................ACTTTGTTCTTCTGGGCTCCA.................................................................................................................................................................................................................... 21 3 6 0.33 2 0 2 0 0 0 0 0 0 0 0 0
................................................CGGCAAGTTTTGGAAGCACT...................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0
......................................ATCGTTAAGTGGGAAA.................................................................................................................................................................................................... 16 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................CTCGGAAAACCTGTT................................................................. 15 1 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................GATAATCAAATCGGTGGG................................................................................................................. 18 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
........................................CGTTAAATGGGTAAG................................................................................................................................................................................................... 15 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0
.............................TGGGCTGCAATCGTT.............................................................................................................................................................................................................. 15 1 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0
...................................................TAAGTTTTGGAGCCA........................................................................................................................................................................................ 15 1 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................TTAGTTCCCGGGAAACC..................................................................... 17 2 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................TTTTATTATTATTTGT...................................................................................... 16 0 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................TGCATAACCGTCATCCCT.................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................................................................AAAAGTAGTACATATATAT................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

AAAGAAGTCCGGGGTTCTGCTATAAGAAGACCCGAGGTTAGCAATTCACCCATTCAAAACCTTGGTGAACGTATTGGTACTTGGGACGCAGGAATCGGTTAAGGGTAATAGTAGCTCGACTATTTGTTTAGACACCCGCTTATAACACAAAATAATAATAAACAAATCAAGAGCCGTTTGGACAAGTTCGGGCGCTATTTAATCATGTATATATATATTGTAAAAGGAGAGGTGCGCGCTCTAAGACTAT
***********************************************************.....................(((((....(((((((((..((((..(((((...)))))..)))).)))))))))...)))))................******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR553488
RT_0-2 hours eggs
 O002
Head
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
......GTCCGGGGTTCTGCTATAAGA............................................................................................................................................................................................................................... 21 0 1 4.00 4 4 0 0 0 0 0 0 0
.......................................................................................GCAGGAATCGGTTAAGGGTAA.............................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0
........CCGGGGTTCTGCTATAAGAAG............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................GAGAGCCGTTTGGGCAAGTTCGGGCG........................................................ 26 2 1 1.00 1 1 0 0 0 0 0 0 0
.....AGTCCGGGGTTCTGCTATAAGA............................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TATATATATTATAAAAGGAGTAGTGCGC............. 28 3 1 1.00 1 0 0 1 0 0 0 0 0
.........CGGGGTTCTGCTATAAGAAGA............................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................CTTGGGACGCAGGAATCGGTT...................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................................................................................AACAAATAAAGAGCCGTTT....................................................................... 19 1 2 0.50 1 0 0 0 1 0 0 0 0
......................................................................GTGTTGGTAGTTGGGATGCA................................................................................................................................................................ 20 3 7 0.14 1 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................TTCGGGAGCTGGTTAATCAT............................................ 20 3 7 0.14 1 0 0 1 0 0 0 0 0
..............................................................................................TCGGTTCAGGGTAAT............................................................................................................................................. 15 1 9 0.11 1 0 0 0 0 0 1 0 0
........................................................................................CAGGAATCGCCTAAGGCT................................................................................................................................................ 18 3 20 0.10 2 0 0 0 0 0 1 1 0
...........................................................................GGTACTTGGCACCCAGAAA............................................................................................................................................................ 19 3 16 0.06 1 0 0 0 0 0 0 0 1
...............................................................................CTTGGGACGCAGGGATAA......................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0
...............................................................GGTGAATGTATTTGTACTTA....................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:15629820-15630069 + dsi_16034 TT----------T---C----TTCAGGCCCCAAGACGATATTCTTCTGGGCTCCAATCGTTAAGTGGGTAAGTTTTG----------------------G-------AACCACTTGCATAACCATGAACCCT--GC---GTCCTTAGCCAA-TTCCCATTATCATCG------------------------------------------AGCTGATAAAC-AAATCTGTGGGCG--------------------------------------AA-------------------------------------------TATTGTG--------------TTTTATTATTATTTGTTTAGTTCTCGG----CAAACCTGTTCA-------AGCCCG-CGATAAATT----------------------AGTACATATAT----------A------TATAACATTTTC--CTCTCCACGCGCGAG-ATTCTGATA
droSec2 scaffold_0:16500072-16500321 + TT----------C---C----TTCAGGCCCTAAGACGATATTCTTCTGGGCTCCAATCGTTAAGTGGGTAAGTTTTG----------------------G-------AACCACTTGCATAACCATGAACCCT--GC---GTCCTTAGCCAA-TTCCCATTATCATCG------------------------------------------AGCTGATAAAC-AAATCTGTGGGCG--------------------------------------AA-------------------------------------------TGTTGTG--------------TTTTATTATTATTTGTTTAGTTCTCGG----TAAACCTGTTCA-------AGCCCG-CTATAAATT----------------------AGTACGTATAT----------A------TATAACATTTTC--CTCTCCACCCGCGAG-ATTCTGATA
dm3 chr3R:5396651-5396904 - TT----------C---C----TTCAGGACCCAAGACCATATTCTTTTGGGCTCCAATCGTTAAGTGGGTAAGTTTTT----------------------G-------CACTACTTGCATAACCATGAACCCT--GC---GTCCTTAGCCAA-TTCCCATTATCACCG------------------------------------------TACTGATAAAC-AAACCTGTGGGCG--------------------------------------AA-------------------------------------------TATTGTG--------------TTTTATTATTATTTGTTTAGTTCTCGG----CAAACCTGTTCA-------AGCCCG-CGATAAATA----------------------TGTATATATGT--ACTT----A------TATACCATTTTC--CTCTCCACGCGCGAG-ATTCTGATA
droEre2 scaffold_4770:16203594-16203853 + CT----------T---C----TTCAGGTCCCAAGACCATATTCTTCTGGGGTCCAATCGTGAAATGGGTAAGTTTCG----------------------G-------AACTACTTGCATAACCATGAACCCT--GC---GTCCTTAGCCAA-TTCCCATTATCACCG------------------------------------------TACTGATAAAC-AAATCTGTGGGCG--------------------------------------CA-------------------------------------------TATGGTG--------------TTTTATTAATATTTGTTTAGTTCTCAG----CAAACCTGTTCA-------AGCCCG-CGATAAATT----------------------AGTACGTATATGTATGTATGTA------TATACCATTTTG--CTCTCCACGCGCGAG-ATTCTGATA
droYak3 3R:9447926-9448176 - TT----------C---C----TCCAGGCCCAAAGACCATATTCTTCTGGGGTCCCATCGTTAAGTGGGTAAGTTTTT----------------------GG------CACTACTTGCATAACTATGAACCCT--GC---GTCCTTCGCCAA-TTGCCATTATCACCG------------------------------------------TACTGATAAAC-AAATCTGTGGGCG--------------------------------------CA-------------------------------------------TATTGTG--------------TTTTATTATTATTTGTTTAGTTCTCGG----CAAACCTGTTCA-------AGCTCG-CGATAAATT----------------------AATACGTATGT----------A------TATACCATTTTC--CTCTCCACGCGCGAG-ATTCTGATA
droEug1 scf7180000407136:295471-295723 + TGACGGATTTACCA--T----TTAAGGTCCCAAGACAATATTCTTTTGGGCACCTCTCGTTAAATGGGTAAGTTTGG----------------------AA------AGCTTGTTGTATAACTT-GTCCTAA--TT---GTCCTTCGCCAATTTTATATTATCACCG------------------------------------------AGCTGATAAAC-AAATCTGTGGGAG--------------------------------------CA-------------------------------------------TATTGTG--------------TTTTATTATTATTTGTTTAATTCTCAG----C-AACCTGTTCA-------AGCTCG-CGATAAATG----------------------AATACATTTT------------------------TTTTTC--ATTTCCACGCGCGAG-ATTCTGATA
droBia1 scf7180000302075:5407883-5408110 - CC----------CC--C----TCTAGGTCCCAAGACCATATTCTTTTGGGGTCCCATCGTTAAATGGGTAAGTTTGG----------------------C-------AACGTCTTATATAACTCGGCAGCCT--TC---GTCCTTTGCCC-----------------------------------------------------------AGCTGATAAAC-AAATCTGTGGGCG--------------------------------------AA-------------------------------------------TCTCGAG--------------TTTTATTGCTATTTGTTTATTTCTC--------AACCTGATGA-------AGCTCG-CGATAAATG----------------------AATACTTATACGTAG-------------------TTTTTC--GTCCCCACGCGCGAG-ATTCTGATA
droTak1 scf7180000415245:123346-123580 + TC----------T---T----TTTAGGTCCTAAGACCATATTCTTCTGGGCTCCTCTCGTCAAATGGGTAAGTTTGG----------------------A-------AACCTCTTACGTAACTCTAAACCCT--GC---GTCCTTAGTCAA-TTTCTATTATCGCCA------------------------------------------AGCTGATAAAC-AAATCTGTGGGCG--------------------------------------CA-------------------------------------------TATTGTG--------------TTTTATTATTATTTGTTTATTTCTCGG----C-AACCTGTTCA-------AGCTCG-CGATAAATG----------------------A---TAT---------------------------TTTTTG--TTCCCCACGCGCGAG-ATTCTGATA
droEle1 scf7180000491047:250678-250914 + TT----------CA--C----CCTAGGTCCCAAGACAATATTCTTCTGGGCTCCTCTCGTTAAATGGGTAAGTTGG-----------------------------------TGTTATGTAACTATGAGCCCA--GC---GTCCTTAGCCAA-TTTTCATTATCACCA------------------------------------------AGCTGATAAAAAAAATCTGTGGGCG--------------------------------------CA-------------------------------------------TATTGTG--------------TTTTATTATTGTTTGTTTATTTCTCAG----C-AAGTTTTTCA-------ACTTCG-CGATAAATT----------------------AATAAATATAT------------------------TTTTT--TCCCCCACGCGCGAG-TTTCTGATA
droRho1 scf7180000777865:166569-166810 - TT----------CA--C----CCTAGGTCCAAAGACCATATTCTTTTGGGGTCCTATCGTTAAATGGGTAAGTTCGT------------------CGT-G-------AGCCTGTTATATAACTCTAAGCCCC--GC---GTCCTTAGCCAA-TTTTCATTATCGCCA------------------------------------------AGCTGATAACC-AAATCTGTGGGAG--------------------------------------CA-------------------------------------------TATTGTG--------------TTTTATTATTGTTTGTTTATTTCTCGG----C-AACCTGTTCA----------TCG-CGATAAATT----------------------AATATATTTT------------------------TTTTTC--GTCCCCACGCGCGAT-TTTCTGATA
droFic1 scf7180000454104:1450692-1450917 + TC----------TA--C----TTTAGGCCCAAAAACTATATTTTTCTGGGCTCCTCTCGTTAAATGGGTAAGTGTCT----------------------A-------ATACTGTTACATAACTTTAA------------GTCCTTTGCCAA-TTTCTATAATCGGCA------------------------------------------AGCTGATAAAC-CAATCTGCGGGGG--------------------------------------CA-------------------------------------------T------------------------ATTATTATTTGTATAGCTCTCCG----C-AGCCTGTGAA-------AGCTTG-TGATAAATA----------------------AATATATTTTT-----------------------TTATTG--AGCCCCACGCGCGAA-ATTCTGATA
droKik1 scf7180000302387:445946-446236 - CT----------GTGTC----CTTAGGTCCCAAGACTATATTCTTCTGGGCCCCGCTGGTTAAATGGGTAAGTTGGG----------------------AATCCCCCCTGCTGTTACATAATTCTGAACCCA--GC---GTCCTTCGCCAA-TTTTTCCTATCGGCT------------------------------------------AGCTGATAAAC-AAATCTGTGGGCGGAA-------------------TGCTACTAATCGCGCGTA-------------------------------------------TATTGTA--------------TTTTATTATTATTTGTTTATTTCTCAA----C-AACCTGTTTA-------GGTTCG-CGATAAATGCGCATTTGTCTCACTCTCTTGGAATACATTT-------------------------TTATTC--GTCCCCACGCGCGAG-ATTCTGATA
droAna3 scaffold_13340:15412540-15412804 - CA----------T---T----CCCAGGACCAAAAACCATATTCTTCTGGGCACCCCTCGTCAAATGGGTGAGTTGAG----------------------A-------GGATTGTGACATAATTGTGA-------GC---GTCCTCCGCCGA-TGTTCATTATCAGCA------------------------------------------AGCTGATAAAC-AAATCTGTGGGCAAGC-------------------TGCTA--AACCAAGCGTA-------------------------------------------TATTGTG--------------TTT--TTATTATTTGTTTATTTCCCTGGG--C--ATAGTAGCA-------AATTCG-TGATAAATA----------------------TGTATGTGTCC----GTATCTG------GATT--TGGTTT--AGTGGCATGTGCGAACATTCTGATA
droBip1 scf7180000396708:4617890-4618159 + AT--------------T----TTCAGGACCAAAAACCATATTCTTCTGGGCACCCCTCGTCAAATGGGTGAGTTGGG----------------------A-------GGATTGTGACATAATTCGGAATTCTGAGC---GTCCTCCGCTTA-TGTTCATTATCAGCG------------------------------------------AGCTGATAAAC-AAATCTGTGGGCAAGC-------------------TGCTA--AACCAAGCGTA-------------------------------------------TATTGTG--------------TTT--TTATTATTTGTTTATTTCCCGGAG--T--A-TAGTAGC-------GATTCG-TGATAAATA----------------------TGTATGTGTCC----GTATCTG------GATT--TGGTTT--AGTGGCATGTGCGAACATTCTGATA
dp5 2:24015279-24015599 - GC----------TCT-G----TTAAGGTCCAAAGACGATATTCTTTTGGGCACCGCTGGTCAAATGGGTAAGTTGTC------------------------------AGGAGGTTACATAACTTTGACAGCT--GC---GTCCTTTGGCAA-TTTTCATTATCGCG-TCGA--------------------------------------CACTGATAAAC-AAATCTGTAGGCGAGCGTTTCTGCTACTCTACTCGTACTA--AAACGACCATA-------------------------------------------TATTGTG--------------CTTTATTATGATTTGTTTATGTCGGAA----C-AACCTGTTCAGAATAGC--GACG-CGATAAATGCGCATTTGCCTC--TCTCAGAGA--ACCTATAGATAG--AGGCAGAGGCAGA------TCTATTTCCCACACGCGCGA--CTTTTGATA
droPer2 scaffold_3:6793754-6794072 - TC----------T---G----TTAAGGTCCAAAGACGATATTCTTTTGGGCCCCGCTGGTCAAATGGGTAAGTTGTC------------------------------AGGAGGTTATATAACTTTGACAGCT--GC---GTCCTTTGGCAA-TTTTCATTATCGCG-TCGA--------------------------------------CACTGATAAAC-AAATCTGTAGGCGAGCGTTTCTGCTACTCTACTCGTACTA--AAACGACCATA-------------------------------------------TATTGTG--------------CTTTATTATGATTTGTTTATGTCGGAA----C-AACCTGTTCAGAATAGC--GACG-CGATAAATGCGCATTTGCCTC--TCTCAGAGA--ACCTATACAGAG--AGGCAATGGCAGA------TCTATTTCCCACACGCGCGA--CTTTTGATA
droWil2 scf2_1100000004902:4679246-4679510 - TT----------TTTTTTTTATGTAGGACCCAAAACGATTTTCTTCTGGGCTCCTGTATTCAAATGGGTGAGTTCACC--TGC------------AGA-C-------AGGTGGTTACATAATCTCAGACTAC--GTCTCGACCTTGGCAAAATTTTCATTATCGCCACCGACAGTCCAATACATACGCATATAAGTACAATTCGAAAAGAGGCCATATAT-AAATCTGTGCGGG--------------------------------------AA-------------------------------------------CGATGCGACGATTATAAATATTTTTATTATTATTTGTTTATTCTGGCC----C-AACTTGTTTG-------C----------------------------------------------------------------------------------------------------GACC
droVir3 scaffold_12855:5711375-5711591 - dvi_4084 CG----------T---T----TTTAGGTCCAAAAACGATTTTCTTCTGGGCACCAATTTTCAAATGGGTAAGTTACCT--ATCAGACAGACTGACGGA-C-------AGCCTGTTACATAATTTCGA-CTGC--GT---GACCTTCGCTAA-TTTTCATTATCTCTGTCTGC-------------------------------------TGCTGATATACAAAATCT-AA--------------------------TGA---------------C-ATTAAT--ACAGATATCTGCGAGTGTGT----------GCGAATTGCT--------------TTTTATGATTATTTGTTTA----------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:6034668-6034888 - AT----------T---C----GATAGGTCCAAAAACCGTTTTCTTTTGGGCACCAATAATTAAATGGGTAAGTAAACGATAACAGACAGATTGACAGA-C-------AGCCTGTTACATAATACAGA-CTGC--AT---GACCTTCGCTAT-TTTTCATTATCTCTGTCTGC-------------------------------------TGCTGATATAGCAAATCTGAA--------------------------TGA---------------C-ATTAATACACAAAAATCTCGGAGAGTGT----------GCGAATTGC---------------TTTTATGAATATTTGTTTA----------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:8292183-8292519 + TG----------T---T----TTTAGGTCCCAAAACGATTTTCTTCTGGGCACCTATCTTCAAATGGGTAAGCTGACG--GACAGACAGATGGACGGATAATCTATCAGCCAGTTACATAATTTGG-ACTGC--AT---GACCTTCGCTAA-TTTGCATTATCACTGTCTAC-------------------------------------GACTGATAGACAATATTTTAA--------------------------TGA---------------AGAATTATAAACAGAAATCCGAGAGAGTGTCGCCGTCTGCTCAGATTGCT--------------TTTTATGATTGCTGGTTTATTTGCGTA-CAATAAACTCGTTGAGAGCGTC--AGCGTCAATACCTGCGCACTTATATA--TA------CGTATATACAT--ATAT----A----CAC-----ATATAT--GCCCCTGTGTGTGT----------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TT----------T---C----TTCAGGCCCCAAGACGATATTCTTCTGGGCTCCAATCGTTAAGTGGGTAAGTTTTG----------------------G-------AACCACTTGCATAACCATGAACCCT--GC---GTCCTTAGCCAA-TTCCCATTATCATCG------------------------------------------AGCTGATAAAC-AAATCTGTGGGCG--------------------------------------AA-------------------------------------------TATTGTG--------------TTTTATTATTATTTGTTTAGTTCTCGG----CAAACCTGTTCA-------AGCCCG-CGATAAATT----------------------AGTACATATAT----------A------TATAACATTTTC--CTCTCCACGCGCGAG-ATTCTGATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................AGACGATATTCTTCTGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00302100000000000000
..............................................................................................................................................CTTAGCCAA-TTCCCATTATCATCG------------------------------------------AGCT........................................................................................................................................................................................................................................................................................2812.00202000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CTCGG----CAAACCTGTTCA-------AGCC.....................................................................................................2112.00211000000000000000
...............................AAGACGATATTCTTCTGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.....................................................................................................................ATAACCATGAACCCT--GC---GTCCT.............................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..............................CAAGACGATATTCTTCTGGGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTAGTTCTCGG----CAAACCTGT...................................................................................................................2011.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................GTTTAGTTCTCGG----CAAACCTG....................................................................................................................2111.00110000000000000000
.....................................ATATTCTTCTGGGCTCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTGTTTAGTTCTCGG----CAAACCT.....................................................................................................................2211.00101000000000000000
..............................CAAGACGATATTCTTCTGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................TTATTATTATTTGTTTAGTTCTCGG----C...........................................................................................................................2611.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................A------TATAACATTTTC--CTCTC....................1811.00100000100000000000
.................................GACGATATTCTTCTGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.................................GACGATATTCTTCTGGGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................TAGTTCTCGG----CAAACCTGTTCA-------AGCCC....................................................................................................2711.00101000000000000000
..................................................................................................................TGCATAACCATGAACCCT--GC---GTCCTT............................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
............................................TCTGGGCTCCAATCGTTAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................TTTTATTATTATTTGT...........................................................................................................................................16180.06100000000001000000
droSec2
TT----------C---C----TTCAGGCCCTAAGACGATATTCTTCTGGGCTCCAATCGTTAAGTGGGTAAGTTTTG----------------------G-------AACCACTTGCATAACCATGAACCCT--GC---GTCCTTAGCCAA-TTCCCATTATCATCG------------------------------------------AGCTGATAAAC-AAATCTGTGGGCG--------------------------------------AA-------------------------------------------TGTTGTG--------------TTTTATTATTATTTGTTTAGTTCTCGG----TAAACCTGTTCA-------AGCCCG-CTATAAATT----------------------AGTACGTATAT----------A------TATAACATTTTC--CTCTCCACCCGCGAG-ATTCTGATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTC--CTCTCCACCCGCGAG-A........2011.0011000
...............................................................................................................................................................................................................................ATCTGTGGGCG--------------------------------------AA-------------------------------------------TGTTGTG--------------T..........................................................................................................................................................2111.0010001
..............................................................AGTGGGTAAGTTTTG----------------------G-------AACCA.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.........................................................................................................................................................................................................................AAC-AAATCTGTGGGCG--------------------------------------AA-------------------------------------------TGT.............................................................................................................................................................................2111.0010001
.......................................ATTCTTCTGGGCTCCAATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.............................................CTGGGCTCCAATCGTTAAGTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.............................CTAAGACGATATTCTTCTGGGCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
dm3
TT----------C---C----TTCAGGACCCAAGACCATATTCTTTTGGGCTCCAATCGTTAAGTGGGTAAGTTTTT----------------------G-------CACTACTTGCATAACCATGAACCCT--GC---GTCCTTAGCCAA-TTCCCATTATCACCG------------------------------------------TACTGATAAAC-AAACCTGTGGGCG--------------------------------------AA-------------------------------------------TATTGTG--------------TTTTATTATTATTTGTTTAGTTCTCGG----CAAACCTGTTCA-------AGCCCG-CGATAAATA----------------------TGTATATATGT--ACTT----A------TATACCATTTTC--CTCTCCACGCGCGAG-ATTCTGATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................GACCATATTCTTTTGGGCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACCATATTCTTTTGGGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CTGATAAAC-AAACCTGTGGGC....................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................TGTGGGCG--------------------------------------AA-------------------------------------------TATTGTG--------------TTTTATT....................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................C-AAACCTGTGGGCG--------------------------------------AA-------------------------------------------TA..............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AACCTGTGGGCG--------------------------------------AA-------------------------------------------TATTGTG--------------...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................TCTTTTGGGCTCCAATCGTTAAGTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AGTTCTCGG----CAAACCTGTTCA-------A........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TAACCATGAACCCT--GC---GTCCT.............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................GGGCTCCAATCGTTAAGTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGCGAG-ATTCTGAT.1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGG----CAAACCTGTTCA-------AGCCC....................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CCT--GC---GTCCTTAGCCAA-TTCCCATTATC..........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCATTTTC--CTCTCCACGCGCGAG-AT.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TACTGATAAAC-AAACCTGTGG......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CTCCAATCGTTAAGTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................ACTGATAAAC-AAACCTGTGGG.....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ATTTGTTTAGTTCTCGG----C...........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGTGGGCG--------------------------------------AA-------------------------------------------TATTGTG--------------TTTT.......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................CTTGCATAACCATGAACCCT--.......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ACTT----A------TATACCATTTTC--CTCTCCACG................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTAAGTGGGTAAGTTTTT----------------------G-------CA................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CCTGTGGGCG--------------------------------------AA-------------------------------------------TATTGTG--------------TTTTAT.....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TCTTTTGGGCTCCAATCGTTAAGTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGTGGGCG--------------------------------------AA-------------------------------------------TATTGTG--------------TTT........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droEre2
CT----------T---C----TTCAGGTCCCAAGACCATATTCTTCTGGGGTCCAATCGTGAAATGGGTAAGTTTCG----------------------G-------AACTACTTGCATAACCATGAACCCT--GC---GTCCTTAGCCAA-TTCCCATTATCACCG------------------------------------------TACTGATAAAC-AAATCTGTGGGCG--------------------------------------CA-------------------------------------------TATGGTG--------------TTTTATTAATATTTGTTTAGTTCTCAG----CAAACCTGTTCA-------AGCCCG-CGATAAATT----------------------AGTACGTATATGTATGTATGTA------TATACCATTTTG--CTCTCCACGCGCGAG-ATTCTGATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................CTGGGGTCCAATCGTGAAATGGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000300
..........................................CTTCTGGGGTCCAATCGTGAAATGGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000200
.................................................GGTCCAATCGTGAAATGGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...........................................TTCTGGGGTCCAATCGTGAAATGGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.................................................GGTCCAATCGTGAAATGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
....................................CATATTCTTCTGGGGTCCAATCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
................................................GGGTCCAATCGTGAAATGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...........................................TTCTGGGGTCCAATCGTGAAATGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
..........................................CTTCTGGGGTCCAATCGTGAAATGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
.............................................CTGGGGTCCAATCGTGAAATGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
....................................CATATTCTTCTGGGGTCCAATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..................................................GTCCAATCGTGAAATGGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000010
droYak3
TT----------C---C----TCCAGGCCCAAAGACCATATTCTTCTGGGGTCCCATCGTTAAGTGGGTAAGTTTTT----------------------GG------CACTACTTGCATAACTATGAACCCT--GC---GTCCTTCGCCAA-TTGCCATTATCACCG------------------------------------------TACTGATAAAC-AAATCTGTGGGCG--------------------------------------CA-------------------------------------------TATTGTG--------------TTTTATTATTATTTGTTTAGTTCTCGG----CAAACCTGTTCA-------AGCTCG-CGATAAATT----------------------AATACGTATGT----------A------TATACCATTTTC--CTCTCCACGCGCGAG-ATTCTGATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................GGGGTCCCATCGTTAAGTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000
.................................................................................................................................................................................................................................................................................................................................................................TTTAGTTCTCGG----CAAACCTGT...................................................................................................................2111.00100000010000
droEug1
TGACGGATTTACCA--T----TTAAGGTCCCAAGACAATATTCTTTTGGGCACCTCTCGTTAAATGGGTAAGTTTGG----------------------AA------AGCTTGTTGTATAACTT-GTCCTAA--TT---GTCCTTCGCCAATTTTATATTATCACCG------------------------------------------AGCTGATAAAC-AAATCTGTGGGAG--------------------------------------CA-------------------------------------------TATTGTG--------------TTTTATTATTATTTGTTTAATTCTCAG----C-AACCTGTTCA-------AGCTCG-CGATAAATG----------------------AATACATTTT------------------------TTTTTC--ATTTCCACGCGCGAG-ATTCTGATASizeHit CountTotal NormTotal
No Reads
droBia1
CC----------CC--C----TCTAGGTCCCAAGACCATATTCTTTTGGGGTCCCATCGTTAAATGGGTAAGTTTGG----------------------C-------AACGTCTTATATAACTCGGCAGCCT--TC---GTCCTTTGCCC-----------------------------------------------------------AGCTGATAAAC-AAATCTGTGGGCG--------------------------------------AA-------------------------------------------TCTCGAG--------------TTTTATTGCTATTTGTTTATTTCTC--------AACCTGATGA-------AGCTCG-CGATAAATG----------------------AATACTTATACGTAG-------------------TTTTTC--GTCCCCACGCGCGAG-ATTCTGATASizeHit CountTotal NormTotal
No Reads
droTak1
TC----------T---T----TTTAGGTCCTAAGACCATATTCTTCTGGGCTCCTCTCGTCAAATGGGTAAGTTTGG----------------------A-------AACCTCTTACGTAACTCTAAACCCT--GC---GTCCTTAGTCAA-TTTCTATTATCGCCA------------------------------------------AGCTGATAAAC-AAATCTGTGGGCG--------------------------------------CA-------------------------------------------TATTGTG--------------TTTTATTATTATTTGTTTATTTCTCGG----C-AACCTGTTCA-------AGCTCG-CGATAAATG----------------------A---TAT---------------------------TTTTTG--TTCCCCACGCGCGAG-ATTCTGATASizeHit CountTotal NormTotal
No Reads
droEle1
TT----------CA--C----CCTAGGTCCCAAGACAATATTCTTCTGGGCTCCTCTCGTTAAATGGGTAAGTTGG-----------------------------------TGTTATGTAACTATGAGCCCA--GC---GTCCTTAGCCAA-TTTTCATTATCACCA------------------------------------------AGCTGATAAAAAAAATCTGTGGGCG--------------------------------------CA-------------------------------------------TATTGTG--------------TTTTATTATTGTTTGTTTATTTCTCAG----C-AAGTTTTTCA-------ACTTCG-CGATAAATT----------------------AATAAATATAT------------------------TTTTT--TCCCCCACGCGCGAG-TTTCTGATASizeHit CountTotal NormTotal
No Reads
droRho1
TT----------CA--C----CCTAGGTCCAAAGACCATATTCTTTTGGGGTCCTATCGTTAAATGGGTAAGTTCGT------------------CGT-G-------AGCCTGTTATATAACTCTAAGCCCC--GC---GTCCTTAGCCAA-TTTTCATTATCGCCA------------------------------------------AGCTGATAACC-AAATCTGTGGGAG--------------------------------------CA-------------------------------------------TATTGTG--------------TTTTATTATTGTTTGTTTATTTCTCGG----C-AACCTGTTCA----------TCG-CGATAAATT----------------------AATATATTTT------------------------TTTTTC--GTCCCCACGCGCGAT-TTTCTGATASizeHit CountTotal NormTotal
No Reads
droFic1
TC----------TA--C----TTTAGGCCCAAAAACTATATTTTTCTGGGCTCCTCTCGTTAAATGGGTAAGTGTCT----------------------A-------ATACTGTTACATAACTTTAA------------GTCCTTTGCCAA-TTTCTATAATCGGCA------------------------------------------AGCTGATAAAC-CAATCTGCGGGGG--------------------------------------CA-------------------------------------------T------------------------ATTATTATTTGTATAGCTCTCCG----C-AGCCTGTGAA-------AGCTTG-TGATAAATA----------------------AATATATTTTT-----------------------TTATTG--AGCCCCACGCGCGAA-ATTCTGATASizeHit CountTotal NormTotal
No Reads
droKik1
CT----------GTGTC----CTTAGGTCCCAAGACTATATTCTTCTGGGCCCCGCTGGTTAAATGGGTAAGTTGGG----------------------AATCCCCCCTGCTGTTACATAATTCTGAACCCA--GC---GTCCTTCGCCAA-TTTTTCCTATCGGCT------------------------------------------AGCTGATAAAC-AAATCTGTGGGCGGAA-------------------TGCTACTAATCGCGCGTA-------------------------------------------TATTGTA--------------TTTTATTATTATTTGTTTATTTCTCAA----C-AACCTGTTTA-------GGTTCG-CGATAAATGCGCATTTGTCTCACTCTCTTGGAATACATTT-------------------------TTATTC--GTCCCCACGCGCGAG-ATTCTGATASizeHit CountTotal NormTotal
No Reads
droAna3
CA----------T---T----CCCAGGACCAAAAACCATATTCTTCTGGGCACCCCTCGTCAAATGGGTGAGTTGAG----------------------A-------GGATTGTGACATAATTGTGA-------GC---GTCCTCCGCCGA-TGTTCATTATCAGCA------------------------------------------AGCTGATAAAC-AAATCTGTGGGCAAGC-------------------TGCTA--AACCAAGCGTA-------------------------------------------TATTGTG--------------TTT--TTATTATTTGTTTATTTCCCTGGG--C--ATAGTAGCA-------AATTCG-TGATAAATA----------------------TGTATGTGTCC----GTATCTG------GATT--TGGTTT--AGTGGCATGTGCGAACATTCTGATASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................GACCAAAAACCATATTCTTCTGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................ATAAAC-AAATCTGTGGGCAAGC-------------------TGCT.........................................................................................................................................................................................................................................2611.001000010
droBip1
AT--------------T----TTCAGGACCAAAAACCATATTCTTCTGGGCACCCCTCGTCAAATGGGTGAGTTGGG----------------------A-------GGATTGTGACATAATTCGGAATTCTGAGC---GTCCTCCGCTTA-TGTTCATTATCAGCG------------------------------------------AGCTGATAAAC-AAATCTGTGGGCAAGC-------------------TGCTA--AACCAAGCGTA-------------------------------------------TATTGTG--------------TTT--TTATTATTTGTTTATTTCCCGGAG--T--A-TAGTAGC-------GATTCG-TGATAAATA----------------------TGTATGTGTCC----GTATCTG------GATT--TGGTTT--AGTGGCATGTGCGAACATTCTGATASizeHit CountTotal NormTotal
No Reads
dp5
GC----------TCT-G----TTAAGGTCCAAAGACGATATTCTTTTGGGCACCGCTGGTCAAATGGGTAAGTTGTC------------------------------AGGAGGTTACATAACTTTGACAGCT--GC---GTCCTTTGGCAA-TTTTCATTATCGCG-TCGA--------------------------------------CACTGATAAAC-AAATCTGTAGGCGAGCGTTTCTGCTACTCTACTCGTACTA--AAACGACCATA-------------------------------------------TATTGTG--------------CTTTATTATGATTTGTTTATGTCGGAA----C-AACCTGTTCAGAATAGC--GACG-CGATAAATGCGCATTTGCCTC--TCTCAGAGA--ACCTATAGATAG--AGGCAGAGGCAGA------TCTATTTCCCACACGCGCGA--CTTTTGATASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................TGGTCAAATGGGTAAGTTGTC------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000002000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTGCCTC--TCTCAGAGA--A...............................................................2111.0010000010000
.................................................................................................................................................................................................................CACTGATAAAC-AAATCTGTAGGCGAGCG...............................................................................................................................................................................................................................................................2811.0010000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATTTCCCACACGCGCGA--C........2111.0010100000000
.........................GGTCCAAAGACGATATTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................................................................................................................................................................................................................GATAAAC-AAATCTGTAGGCGA..................................................................................................................................................................................................................................................................2111.0010100000000
................................................GGCACCGCTGGTCAAATGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................TC------------------------------AGGAGGTTACATAACTTTGACAGC..........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000010
........................................................................................................................................................................CGA--------------------------------------CACTGATAAAC-AAATCTG.........................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGCAGA------TCTATTTCCCAC...................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCCCACACGCGCGA--CT.......2011.0010100000000
..........................................CTTTTGGGCACCGCTGGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
TC----------T---G----TTAAGGTCCAAAGACGATATTCTTTTGGGCCCCGCTGGTCAAATGGGTAAGTTGTC------------------------------AGGAGGTTATATAACTTTGACAGCT--GC---GTCCTTTGGCAA-TTTTCATTATCGCG-TCGA--------------------------------------CACTGATAAAC-AAATCTGTAGGCGAGCGTTTCTGCTACTCTACTCGTACTA--AAACGACCATA-------------------------------------------TATTGTG--------------CTTTATTATGATTTGTTTATGTCGGAA----C-AACCTGTTCAGAATAGC--GACG-CGATAAATGCGCATTTGCCTC--TCTCAGAGA--ACCTATACAGAG--AGGCAATGGCAGA------TCTATTTCCCACACGCGCGA--CTTTTGATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................GACGATATTCTTTTGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.................................................................................................................................................................................................................................................................................................................................................................................C-AACCTGTTCAGAATAGC--GACG-CG................................................................................................2412.002200000
..................................................................................................................................................................................................................ACTGATAAAC-AAATCTGTAGG.....................................................................................................................................................................................................................................................................2111.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TC--TCTCAGAGA--ACCTATACAG......................................................2111.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................TTCAGAATAGC--GACG-CGATAGG...........................................................................................2211.001000001
droWil2
TT----------TTTTTTTTATGTAGGACCCAAAACGATTTTCTTCTGGGCTCCTGTATTCAAATGGGTGAGTTCACC--TGC------------AGA-C-------AGGTGGTTACATAATCTCAGACTAC--GTCTCGACCTTGGCAAAATTTTCATTATCGCCACCGACAGTCCAATACATACGCATATAAGTACAATTCGAAAAGAGGCCATATAT-AAATCTGTGCGGG--------------------------------------AA-------------------------------------------CGATGCGACGATTATAAATATTTTTATTATTATTTGTTTATTCTGGCC----C-AACTTGTTTG-------C----------------------------------------------------------------------------------------------------GACCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................AAAACGATTTTCTTCTGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000
..................................ACGATTTTCTTCTGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
..................................ACGATTTTCTTCTGGGCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00210100
..............................................................................................................................................................................................ATAAGTACAATTCGAAAAG............................................................................................................................................................................................................................................................................................1911.00100010
...............................AAAACGATTTTCTTCTGGGCTCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
................................AAACGATTTTCTTCTGGGCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
...........................................TTCTGGGCTCCTGTATTCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
....................................GATTTTCTTCTGGGCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.....................................ATTTTCTTCTGGGCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
................................AAACGATTTTCTTCTGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
.............................CCAAAACGATTTTCTTCTGGGCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
................................AAACGATTTTCTTCTGGGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.........................................................................................................................................................................................................................................................................................................................................................ATTATTTGTTTATTCTGGCC----C-..........................................................................................................................2111.00101000
...................................CGATTTTCTTCTGGGCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.................................AACGATTTTCTTCTGGGCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.................................................................................................................................................................................................................................................................................A-------------------------------------------CGATGCGACGATTATAAATATT..........................................................................................................................................................2311.00100010
..............................CAAAACGATTTTCTTCTGGGCTCCTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
droVir3
CG----------T---T----TTTAGGTCCAAAAACGATTTTCTTCTGGGCACCAATTTTCAAATGGGTAAGTTACCT--ATCAGACAGACTGACGGA-C-------AGCCTGTTACATAATTTCGA-CTGC--GT---GACCTTCGCTAA-TTTTCATTATCTCTGTCTGC-------------------------------------TGCTGATATACAAAATCT-AA--------------------------TGA---------------C-ATTAAT--ACAGATATCTGCGAGTGTGT----------GCGAATTGCT--------------TTTTATGATTATTTGTTTA----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................TTCTTCTGGGCACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................1513.003000000000000000000000000000000000000000000000000010000000200000
........................................TTCTTCTGGGCACCAATTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000000001000000000000000000000000000000000000000000000
................................AAACGATTTTCTTCTGGGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000100000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATATCTGCGAGTGTGT----------GCGAA..............................................................................................................................................................................2112.002000000000020000000000000000000000000000000000000000000000000000
.......................................TTTCTTCTGGGCACCAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
...................................CGATTTTCTTCTGGGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
...............................AAAACGATTTTCTTCTGGGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TAATTTCGA-CTGC--GT---GACCTT............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...........................................TTCTGGGCACCAATTTTCAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
.........................GGTCCAAAAACGATTTTCTTCTGGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GATATCTGCGAGTGTGT----------G..................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
....................................................................TAAGTTACCT--ATCAGACAGACT.................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AT--ACAGATATCTGCGAGTGTGT----------GC.................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................ACCT--ATCAGACAGACTGA...............................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
................................AAACGATTTTCTTCTGGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
............................CCAAAAACGATTTTCTTCTGGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................ACTGACGGA-C-------AGCCTGTTAC........................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
.......................................TTTCTTCTGGGCACCAATTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................GACAGACTGACGGA-C-------AGC...............................................................................................................................................................................................................................................................................................................................................................................................1820.501010000000000000000000000000000000000000000000000000000000000000
droMoj3
AT----------T---C----GATAGGTCCAAAAACCGTTTTCTTTTGGGCACCAATAATTAAATGGGTAAGTAAACGATAACAGACAGATTGACAGA-C-------AGCCTGTTACATAATACAGA-CTGC--AT---GACCTTCGCTAT-TTTTCATTATCTCTGTCTGC-------------------------------------TGCTGATATAGCAAATCTGAA--------------------------TGA---------------C-ATTAATACACAAAAATCTCGGAGAGTGT----------GCGAATTGC---------------TTTTATGAATATTTGTTTA----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................ACACAAAAATCTCGGAGAGTG..............................................................................................................................................................................................2111.001100000
............................CCAAAAACCGTTTTCTTTTGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droGri2
TG----------T---T----TTTAGGTCCCAAAACGATTTTCTTCTGGGCACCTATCTTCAAATGGGTAAGCTGACG--GACAGACAGATGGACGGATAATCTATCAGCCAGTTACATAATTTGG-ACTGC--AT---GACCTTCGCTAA-TTTGCATTATCACTGTCTAC-------------------------------------GACTGATAGACAATATTTTAA--------------------------TGA---------------AGAATTATAAACAGAAATCCGAGAGAGTGTCGCCGTCTGCTCAGATTGCT--------------TTTTATGATTGCTGGTTTATTTGCGTA-CAATAAACTCGTTGAGAGCGTC--AGCGTCAATACCTGCGCACTTATATA--TA------CGTATATACAT--ATAT----A----CAC-----ATATAT--GCCCCTGTGTGTGT----------GSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:53 PM