dsi_16003

########################################################################################################################################################################################################################################################## ATCCGTCAAGTGCTTTGCTCTTCATCGAACAGTACGTGGGCATCCTCAAGGAATTGGCTGCCAAATACACCTCACTGGGCAAACTGCAGGTTTTAGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCGACGGAGTTGGACGACGAGGAAGTTAAGTACGAGTACGATCTGGATGAGCATTTCGATGTAAAGCCATCGGCCACCAAGCCCGTGGTAACCGAGGATCCCATCGAAGTGAACCC ***************************************************************************************************************.(((....((.((((.((((((((((....(((.....)))....)))..)).))))).)))).)).....))).************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553486 Makindu_3 day-old ovaries	M024 male body	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs	SRR902008 ovaries	M023 head	M053 female body	O001 Testis	SRR553485 Chicharo_3 day-old ovaries	SRR618934 dsim w501 ovaries	GSM343915 embryo
........................................CATCCTCAAGGAATTGGCCGCCAAAA........................................................................................................................................................................................	26	2	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
.................................ACGTGGGCATCCTCAAGGAATTGGCTG..............................................................................................................................................................................................	27	0	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
....................TTCATCGAACAGTACGTGGGCA................................................................................................................................................................................................................	22	0	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................GGATCCCATCGAAGTGA....	17	0	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0
..................................CGTGGGCATCCTCAAGGAATTG..................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................AGGAAGTTCAGTACGAG................................................................................	17	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.............TCTGCTCTTCATCGAACAGTACGTGG...................................................................................................................................................................................................................	26	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
........................TCGAACAGTACGTGGGCATCCTCAAGGAA.....................................................................................................................................................................................................	29	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................CCCGTGGTAACCGAGGATCCCATCGA.........	26	0	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..............................AGTACGTGGGCATCCTCAAGGAATTGGC................................................................................................................................................................................................	28	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................GATCTGGATGAGCAT..............................................................	15	0	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................CGAGTACGATCTGGATGAGC................................................................	20	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................TCATCGAACAGTACGTGGGCATCCTC...........................................................................................................................................................................................................	26	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
............CTTTGCTCTTCATCGAACA...........................................................................................................................................................................................................................	19	0	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................TACGATCTGGATGAGCATTTCGATGTA.....................................................	27	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................CTGCAGCACAAGTCGCACT......................................................................................................................	19	0	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................CTTGGTGACCGAGGATCCGAT............	21	3	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0
.................................ACCTGGGCATCCTCACGGA......................................................................................................................................................................................................	19	2	3	0.33	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................CCCGTGGTAACCGTGGGGCC...............	20	3	6	0.17	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................CAGTTGGACGACGATGAA............................................................................................	18	2	12	0.17	2	0	1	0	0	0	1	0	0	0	0	0
.................................ACCTGGGCATCCTCACGGAT.....................................................................................................................................................................................................	20	3	7	0.14	1	1	0	0	0	0	0	0	0	0	0	0
..............................................................................................AGTCCAGGGCGTTGCCAGG.........................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1
................................................................................................................................................TGGAAGACCAGTAAGTTAA.......................................................................................	19	3	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0

TAGGCAGTTCACGAAACGAGAAGTAGCTTGTCATGCACCCGTAGGAGTTCCTTAACCGACGGTTTATGTGGAGTGACCCGTTTGACGTCCAAAATCAGGTCCGGCAACGGGACGACGTCGTGTTCAGCGTGAGCCGCTGCCTCAACCTGCTGCTCCTTCAATTCATGCTCATGCTAGACCTACTCGTAAAGCTACATTTCGGTAGCCGGTGGTTCGGGCACCATTGGCTCCTAGGGTAGCTTCACTTGGG ************************************************************.(((....((.((((.((((((((((....(((.....)))....)))..)).))))).)))).)).....))).***************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M023 head	SRR902009 testis	SRR553487 NRT_0-2 hours eggs	SRR618934 dsim w501 ovaries	SRR553486 Makindu_3 day-old ovaries	M024 male body	SRR553488 RT_0-2 hours eggs
.........................................................................................................................................................................................................................GAACCACTGGCTCCTAGGCTA............	21	3	1	1.00	1	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................ATTGGCGCCTAGGGTTGCT.........	19	2	2	1.00	2	0	2	0	0	0	0	0
.............................................................................CCGTTTGACGTCTAAAATCAGGTCCG...................................................................................................................................................	26	1	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................TCATGCTCATGCTAGACCTAC...................................................................	21	0	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................TCATGCTAGACCTACTCGTAA.............................................................	21	0	1	1.00	1	0	0	1	0	0	0	0
.....................................................................................................................................................................................................TTCGGTAGCCGGTGGGTCGCGT...............................	22	3	9	0.11	1	0	0	0	1	0	0	0
..................AGAAGTAGCTAGTCA.........................................................................................................................................................................................................................	15	1	10	0.10	1	0	0	0	0	1	0	0
........................................................................................................................................................................TCATGCTGGACCTACTTT................................................................	18	3	20	0.10	2	0	0	0	0	0	2	0
.................................TGGACCCGTAGGAGT..........................................................................................................................................................................................................	15	1	12	0.08	1	0	0	0	0	1	0	0
............................................................................................................................................................................................................GCAGGTGGTTCGGGCAA.............................	17	2	13	0.08	1	0	0	0	1	0	0	0
..GGCAGTTAACGAAAC.........................................................................................................................................................................................................................................	15	1	14	0.07	1	0	0	0	0	0	0	1
..................................................................................................................................GAGGCGCTGCCTTAACTTG.....................................................................................................	19	3	14	0.07	1	0	0	0	0	0	1	0
.....................................................................................................................................................................................ACTCGTACAGCTACA......................................................	15	1	14	0.07	1	0	0	0	1	0	0	0
........................................................................................................................................................................TCATGCTGGACCTACTTTT...............................................................	19	3	20	0.05	1	0	0	0	0	1	0	0

Species	Coordinate	ID	Alignment
droSim2	2r:20432112-20432361 +	dsi_16003	ATCCGTCAAGTGCTTTGCTCTTCATCGAACAGTACGTGGGCATCCTCAAGGAATTGGCTGCCAAATACACCTCACTGGGCAAACTGCAGGTTTTAGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCGACGGAGTTGGACGACGAGGAAGT---TAAGTACGAGTACGATCTGGATGAGCATTT---CGATGTAAAGCCATCGGC---CA---CCAAGCCCGTGGT---AACCGAG---GATCCCATCGAAGTGAACCC
droSec2	scaffold_5:184482-184731 +		ATCCGTCAAGTGCTCTGCTCTTCATCGAACAGTACGTGGGCATCCTCAAGGAATTGGCTGCCAAATACACCTCACTGGGCAAACTGCAGGTTTTGGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCGACGGAGTTGGACGACGAGGAAGT---TAAGTACGAGTATGATCTGGATGAGCATTT---CGATGTAAAGCCATCGGC---CA---CCAAGCCCGTGGT---AACCGAG---GATCCCATCGAAGTGAACCC
dm3	chr2R:19931071-19931320 +		ATCCCTCAAGTGCTCTGCTCTTCATCGAACAGTACGTGGGCATCCTGAAGGAACTTGCAGCCAAGTACACCTCACTAGGCAAACTGCAGGTTTTGGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCGACGGAATTGGACGACGAGGAAGT---TAAGTACGAGTACGATCTGGATGAGCATTT---CGATGTAAAGCCATCGGC---CA---GCAAGCCCGTGGT---AACAGAG---GATCCCATCGAAGTGAATCC
droEre2	scaffold_4845:21306527-21306776 +		ATCCCTCAAGTGCTCTCCTCTTCATCGAACAGTACGTGGGCATCCTCAAAGAACTCGCTGCCAAATACACCTCACTGGGCAAACTCCAGGTTTTGGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCCACAGAATTAGACGACGAGGATGT---TAAGTACGAGTACGATCTGGATGAGCACTT---CGATGTAAAGCCATCGGT---CA---GCAAGCCCGTGGT---AACCGAG---GAACCAATCGAAGTTATCCC
droYak3	2R:19909825-19910074 +		ATCCCTCAAGTGCTCTCCTCTTCATCGAACAGTACGTGGGCATCCTCAAGGAACTGGCTGCCAAATACACCTCACTGGGCAAACTCCAGGTTTTAGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCCACGGAGTTGGACGACGAGGAGGT---TAAGTACGAGTACGATCTGGATGAGCATTT---CGATGTAAAGCCAACGGT---CA---GCAAGCCCGTGGT---AGCTGAG---GAACCAATAGAAGTGATCCC
droEug1	scf7180000409464:304078-304327 +		ATCCCTCAAGTGCCCTGCTCTTCATCGAGCAGTACGTTGGCATCCTCAAGGAATTGGCTGCCAAGTACACCTGGCTAAGTAAGCTCCAGGTTTTGGTTCAAGCAGTGGCCTTACTGCAGCATAAGTCGCATTCAGCCACCGAATTGGACGACGAGGAGGT---TAAGTACGAGTACGATCTGGACGAGCACTT---TGAGGTGAAACCATCGGC---CA---GCAAAGGCGTAGT---TTCGGAG---GACCCCATCGAGGGAAACCC
droBia1	scf7180000302143:464154-464403 +		ATCCCACGAGTGCCCTGCTCTTTATCGAGCAGTACGTGGGCATACTCAAGGAACTGGCTGCCAAGTACACTTCGCTGGGCAAGCTGCAGGTTCTCGTCCAGGCAGTCGCCCTGCTGCAGCACAAGTCGCACTCGGCCACCGAACTCGACGACGAGGAGGT---GAAATACGAGTACGATCTGGACGAGCACTT---CGAGGTGAAGCCATCGGT---CA---GCAAACCCGTGGT---GCCTGAG---GAGCCCGTCGAGGGCAACGC
droTak1	scf7180000415878:1057892-1058141 +		ATCCCTCGAGTGCCCTGCTCTTCATCGAGCAGTACGTGGGCATCCTCAAGGAGCTGGCCGCCAAGTACACCGCGCTGGGAAAGCTTCAGGTTCTCGTCCAGGCAGTCGCCCTGCTGCAGCACAAGTCTCACTCGGCCACCGAGCTGGACGACGAGGAGGT---GAAGTACGAGTACGACCTGGACGAGCACTT---TGAGGTGAAGCCGTCGGC---CA---GCAAACCCGCGGT---GACAGAG---GAGCCCGTCGAGGGCAATCC
droEle1	scf7180000491214:5145664-5145913 -		ATCCCTCGAGTGCCCTGCTCTTCATCGAGCAGTACGTGGGCATCCTCAAGGAGCTGGCTGCCAAGTACACATCGCTGGGCAAGCTGCAGGTTCTGGTCCAGGCAGTGGCCCTTCTGCAGCACAAGTCGCACTCGGCCTCGGAGCTGGACGACGAGGAGGT---GAAGTATGAGTACGACCTGGACGAGCATCT---GGATGCGAAGCCATCGGC---CA---GCAAGCCGGTGGT---CAGTGAG---GAGCCCATCGACGCAAATCC
droRho1	scf7180000780203:13576-13825 +		ATCCCTCAAGTGCCCTTCTCTTCATTGAGCAGTACGTGGGTATCCTCAAGGAGCTGGCTGCCAAGTACACTTCGCTGGCCAAACTGCAGGTTCTGGTCCAGGCAGTTGCCCTTCTGCAGCACAAGTCGCACTCGGCCTCCGAGCTGGACGACGAGGAGGT---GAAGTATGAGTACGACCTGGACGAGCACGT---GGATGTGAAGCCATCGGC---CA---GCAAGCCCGTAGT---CAGTGAA---GAGGCCATCGAGGTAAATCC
droFic1	scf7180000453858:1667853-1668102 +		ACCCGTCGAGCGCCCTGCTCTTTATCGAACAGTACGTGGGCATCCTTAAAGAACTTGCTGTGAAGTATACTTCTCTGGGAAAGCTGCAGGTTCTGGTTCAAGCAGTGGCCCTGCTGCAGCACAAGTCACACTCGGCCTCCGAGCTGGACGACGAGGAGGT---GAAGTACGAGTACGACCTAGACGAGCACTT---CGAAGTGAAGCCGCCGGC---CA---CCAAATCCACTGT---GAGCGAG---GAACTCGTCGAGGGGAACCC
droKik1	scf7180000302355:523259-523505 +		ACCCTTCGAGCGCCCTGCTTTTCATCGAGCAGTATGTCGGCATTCTTATGGAGCTGGCCGCAAAGTACACCTCGCTGGGTAAGCTGCAGGTCCTGGTCCAGGCAGTTGCCCTGTTGCAGCACAAGTCCAGCTCCGCCTCGGAGCTGGATGACGAGGAGGTGGCCAAAAACGAATACGAACTGGACGAACAGTC---------------CTCGTCCTCAAATACCAAGCCCGTGGTGGTGATCGAT---GAGCCCATGGACCC---GCC
droAna3	scaffold_13266:14469979-14470216 -		ATCCCAGCAGTGCTCTGCTCTTCATCGAGCAGTATGTGGGCATCCTCATGGAACTGGCCGACAAGTACGCGACGATGGGTAAACTCCAGATTCTGGTGCAGGCTGTGGCACTTCTGCAGCACAAATCTTCGTCTGCCTCGGAACTGGACGACGAGGAAGT---GAAATACGAGTATGAGCTGGACGAGCA---------------GCCGTCGGT---CA---GCAAGCCGGTGGT---GTTCGAA---GAGCCCATGGAGAGTATTCC
droBip1	scf7180000396428:366468-366705 +		ACCCAACCAGTGCCCTGCTCTTCATCGAGCAGTATGTGGGCATCCTCATGGAACTGGCTGCCAAGTACACGATGATGGCCAAACTTCAGGTTCTGGTGCAGGCTGTGGCTCTCCTGCAGCACAAATCTTCCACTGCCACGGAACTGGACGACGAGGAGGT---GAAATACGAGTACGAGCTGGATGAACA---------------GCCTTCGGC---CA---GCAAGCCGGTGGT---GTTCGAA---GAGCCCATGGAGAGTGCTCC
dp5	3:7618532-7618784 +		ACCCGTCCAGTGCCCTGCTGTTCATCGAACAGTACGTGGGCATACTGATGGAGCTGGCCGCCAAGTACACATCGCTGGGCAAGCTGCAGGTCCTCGTCCAGGCAGTGGCCCTGCTTCAGCACAAGTCGAACTTCCTCTCTGAGCTGGACGACGAGGAGGT---TCGGTACGAGTATGAGCTGGACGAGCACTT---TGAGGTGAAGCCATCGGC---TA---GCAAGCCAGTGGT---AGCCGAGATTGAGCCTTTAGAGGGCAGCGC
droPer2	scaffold_2:7814171-7814421 +		ACCCGTCCAGTGCCCTGCTGTTCATCGAGCAGTACGTGGGCATACTGATGGAGCTGGCCGCCAAGTACACTTCGCTGGGCAAGCTGCAGGTCCTCGTCCAGGCAGTGGCCCTGCTTCAGCACAAGTCGAACTTCCTCTCTGAGCTGGACGACGAGGAGGT---TCGGTACGAGTATGAGCTGGACGAGCACTT---TGAGGTGAAGCCATCGGC---TA---GCAAGCCAGTGGT---AGCCGAGATTGAGCCTTTAGAAGGCA--CC
droWil2	scf2_1100000004513:5047218-5047464 +		ATCCGGTGAGTGCCTTATCGTTTATCGAGCAATATGTTGGAATCTTGATGGAATTGGCAGCCAAGTATACCTCGTTAGAGAAACTACAAGTTTTAGTGCAAGCCGTCGCCTTGCTGCAGCATAAATCGAATGCACCCTACGAGCTTGATGATGAGGAAGT---TAAGTACGAGTACGACTTAGATGAGCATGT---AGAGACAAAGCCTCCTAT---AAATATCAAACCCGATGT---------T---GAAGCTGTTGAAGCAAATTC
droVir3	scaffold_13324:2130372-2130613 +		ATCCTTCAAGTGCATTGTTATTTATTGAGCAATATGTCGGGATTTTGACAGAATTAGCATTCAAGTATCCTTCAATCGTAAAACTACAAGTACTTGTACAAGCTGTTGCTTTGCTTCAGCACAAATCCTATACGTCTTCAGAACTTGATGACGAAGAAGG---AAAATTTGAATATGAACTGGATTACG---------AAACCAAATC---AAA---CA---TAAAAATGTTTGC---AAACGAAATAGAGTCTTTCGATGGAA--GC
droMoj3	scaffold_6496:14871131-14871382 +		ATCCTTCAACTGCATTGCAATTTATTGAGCAATATGTCGGAATTTTGACAGAATTGGCAGCCAGATACACGTCTATCGGAAAGCTGCAAGCTCTTGTGCAAGCTGTTGCTCTACTTCAGCACAAAACGAATACATGCATAGAATTGGATGACGAGGAAGT---GAAGGTGGAATATGAACTAGATGGACATTC---TGAAACAAAACCAACTAC---AA---ATAAAAATTTTGC---CAATGAAATTGATTCCTTTGAGGGC-ACCA
droGri2	scaffold_15245:11895235-11895490 -		ATCCCTCGAGCGCATTGTTATTCATCGAGCAATATGTCGGCATATTGACGGAACTGGCTGTTAAATACACCTCAATTGGCAAGCTACAAGCCTTGGTTCAAGCTGTTGCCTTGCTGCAGCACAAATCGAATACTTTGTCGGAGCTCGATGATGAAGAAGT---CAAATTGGAATATGAACTCGATGGCCATTCGTCGGATACAAAGCCGGCCAC---CA---ATAAAGCTGTCGT---TAGCGATATAGAGCCCTTGGATGGGAATCT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

ATCCGTCAAGTGCTTTGCTCTTCATCGAACAGTACGTGGGCATCCTCAAGGAATTGGCTGCCAAATACACCTCACTGGGCAAACTGCAGGTTTTAGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCGACGGAGTTGGACGACGAGGAAGT---TAAGTACGAGTACGATCTGGATGAGCATTT---CGATGTAAAGCCATCGGC---CA---CCAAGCCCGTGGT---AACCGAG---GATCCCATCGAAGTGAACCC	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.................................ACGTGGGCATCCTCAAGGAATTGGCTG................................................................................................................................................................................................................	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................TTCATCGAACAGTACGTGGGCA..................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................G---GATCCCATCGAAGTGA....	17	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................CGTGGGCATCCTCAAGGAATTG....................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
........................TCGAACAGTACGTGGGCATCCTCAAGGAA.......................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................CCCGTGGT---AACCGAG---GATCCCATCGA.........	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..............................AGTACGTGGGCATCCTCAAGGAATTGGC..................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................GATCTGGATGAGCAT.............................................................................	15	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.........................................................................................................................................................................CGAGTACGATCTGGATGAGC...............................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................TCATCGAACAGTACGTGGGCATCCTC.............................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
............CTTTGCTCTTCATCGAACA.............................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TACGATCTGGATGAGCATTT---CGATGTA.................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................CTGCAGCACAAGTCGCACT........................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

ATCCGTCAAGTGCTCTGCTCTTCATCGAACAGTACGTGGGCATCCTCAAGGAATTGGCTGCCAAATACACCTCACTGGGCAAACTGCAGGTTTTGGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCGACGGAGTTGGACGACGAGGAAGT---TAAGTACGAGTATGATCTGGATGAGCATTT---CGATGTAAAGCCATCGGC---CA---CCAAGCCCGTGGT---AACCGAG---GATCCCATCGAAGTGAACCC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
........................................................................................................................................................................ACGAGTATGATCTGGATGAGC...............................................................................	21	1	1.00	1	0	1	0	0
.....................................................................................................................................................................AGTACGAGTATGATCTGG.....................................................................................	18	1	1.00	1	1	0	0	0
...............................................................AATACACCTCACTGGGCAAACT.......................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
..............................................................................................................................................................GT---TAAGTACGAGTATGATCTGGATG..................................................................................	25	1	1.00	1	0	0	1	0
..............................................................................................................................................................GT---TAAGTACGAGTATGATCTGGAT...................................................................................	24	1	1.00	1	0	1	0	0

dm3

ATCCCTCAAGTGCTCTGCTCTTCATCGAACAGTACGTGGGCATCCTGAAGGAACTTGCAGCCAAGTACACCTCACTAGGCAAACTGCAGGTTTTGGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCGACGGAATTGGACGACGAGGAAGT---TAAGTACGAGTACGATCTGGATGAGCATTT---CGATGTAAAGCCATCGGC---CA---GCAAGCCCGTGGT---AACAGAG---GATCCCATCGAAGTGAATCC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.........................................................................................................................................................................CGAGTACGATCTGGATGAGC...............................................................................	20	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TCGCACTCGGCGACGGAATTGGACGAC....................................................................................................................	27	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8
........................................................................................................................................................................ACGAGTACGATCTGGATGAGC...............................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TGCAGCCAAGTACACCTCACT................................................................................................................................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................TAAGTACGAGTACGATCTGGATGAGC...............................................................................	26	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................TAAGTACGAGTACGATCTGGATGAGCAT.............................................................................	28	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................AGTACGTGGGCATCCTGAAGG.........................................................................................................................................................................................................................	21	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................GAGTACGATCTGGATGAGCAT.............................................................................	21	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
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.......................................................TGCAGCCAAGTACACCTCACTAGGCAA..........................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AACAGAG---GATCCCATCGAAGT......	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................TGCAGGTTTTGGTCCAGGC.....................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................GTTTTGGTCCAGGCCGTTGCC..............................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TCTGCTCTTCATCGAACAGTA..........................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CGAGTACGATCTGGATGAGCAA.............................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................CAAACTGCAGGTTTTGGTCCA........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................GT---TAAGTACGAGTACGATCTGGA....................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................ATTGGACGACGAGGAAGT---TAAGTAC..................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droEre2

ATCCCTCAAGTGCTCTCCTCTTCATCGAACAGTACGTGGGCATCCTCAAAGAACTCGCTGCCAAATACACCTCACTGGGCAAACTCCAGGTTTTGGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCCACAGAATTAGACGACGAGGATGT---TAAGTACGAGTACGATCTGGATGAGCACTT---CGATGTAAAGCCATCGGT---CA---GCAAGCCCGTGGT---AACCGAG---GAACCAATCGAAGTTATCCC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.......................................................................................................................CACAAGTCGCACTCGGCCACAGAAT............................................................................................................................	25	1	2.00	2	2	0	0	0	0	0	0
........................................................................................................................................................................................................GTAAAGCCATCGGT---CA---GC............................................	18	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................GT---TAAGTACGAGTACGATCTGGAT...................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
.......................ATCGAACAGTACGTGGGC...................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................CTCGGCCACAGAATTAGACGACGAGA................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................GAGCACTT---CGATGTAAAGCC............................................................	20	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................ACAAGTCGCACTCGGCCAC.................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0

droYak3

ATCCCTCAAGTGCTCTCCTCTTCATCGAACAGTACGTGGGCATCCTCAAGGAACTGGCTGCCAAATACACCTCACTGGGCAAACTCCAGGTTTTAGTCCAGGCCGTTGCCCTGCTGCAGCACAAGTCGCACTCGGCCACGGAGTTGGACGACGAGGAGGT---TAAGTACGAGTACGATCTGGATGAGCATTT---CGATGTAAAGCCAACGGT---CA---GCAAGCCCGTGGT---AGCTGAG---GAACCAATAGAAGTGATCCC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.....................................................................................................................................................................................................................................CGTGGT---AGCTGAG---GAACC...............	18	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................ACGAGTACGATCTGGATGAGC...............................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......CAAGTGCTCTCCTCTTCATCGAAC..............................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................AGCCAACGGT---CA---GCAAGCCCGT....................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................GT---TAAGTACGAGTACGATCTGGATGAGC...............................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................AAGTACGAGTACGATCTGGATGAGC...............................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................GTTTTAGTCCAGGCCGTTGCC..............................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................CTCGGCCACGGAGTTGGAC.......................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................CCAAATACACCTCACTGGGC............................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........TGCTCTCCTCTTCATCGAACA.............................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CGAGTACGATCTGGATGAGC...............................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................GTTGGACGACGAGGAGGT---TAAGTACGA................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................GGCATCCTCAAGGAACTGGC..................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................GTACGAGTACGATCTGGATGAGC...............................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................CTCTTCATCGAACAGTACGTGGGC...................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

ATCCCTCAAGTGCCCTGCTCTTCATCGAGCAGTACGTTGGCATCCTCAAGGAATTGGCTGCCAAGTACACCTGGCTAAGTAAGCTCCAGGTTTTGGTTCAAGCAGTGGCCTTACTGCAGCATAAGTCGCATTCAGCCACCGAATTGGACGACGAGGAGGT---TAAGTACGAGTACGATCTGGACGAGCACTT---TGAGGTGAAACCATCGGC---CA---GCAAAGGCGTAGT---TTCGGAG---GACCCCATCGAGGGAAACCC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ATCCCACGAGTGCCCTGCTCTTTATCGAGCAGTACGTGGGCATACTCAAGGAACTGGCTGCCAAGTACACTTCGCTGGGCAAGCTGCAGGTTCTCGTCCAGGCAGTCGCCCTGCTGCAGCACAAGTCGCACTCGGCCACCGAACTCGACGACGAGGAGGT---GAAATACGAGTACGATCTGGACGAGCACTT---CGAGGTGAAGCCATCGGT---CA---GCAAACCCGTGGT---GCCTGAG---GAGCCCGTCGAGGGCAACGC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ATCCCTCGAGTGCCCTGCTCTTCATCGAGCAGTACGTGGGCATCCTCAAGGAGCTGGCCGCCAAGTACACCGCGCTGGGAAAGCTTCAGGTTCTCGTCCAGGCAGTCGCCCTGCTGCAGCACAAGTCTCACTCGGCCACCGAGCTGGACGACGAGGAGGT---GAAGTACGAGTACGACCTGGACGAGCACTT---TGAGGTGAAGCCGTCGGC---CA---GCAAACCCGCGGT---GACAGAG---GAGCCCGTCGAGGGCAATCC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ATCCCTCGAGTGCCCTGCTCTTCATCGAGCAGTACGTGGGCATCCTCAAGGAGCTGGCTGCCAAGTACACATCGCTGGGCAAGCTGCAGGTTCTGGTCCAGGCAGTGGCCCTTCTGCAGCACAAGTCGCACTCGGCCTCGGAGCTGGACGACGAGGAGGT---GAAGTATGAGTACGACCTGGACGAGCATCT---GGATGCGAAGCCATCGGC---CA---GCAAGCCGGTGGT---CAGTGAG---GAGCCCATCGACGCAAATCC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ATCCCTCAAGTGCCCTTCTCTTCATTGAGCAGTACGTGGGTATCCTCAAGGAGCTGGCTGCCAAGTACACTTCGCTGGCCAAACTGCAGGTTCTGGTCCAGGCAGTTGCCCTTCTGCAGCACAAGTCGCACTCGGCCTCCGAGCTGGACGACGAGGAGGT---GAAGTATGAGTACGACCTGGACGAGCACGT---GGATGTGAAGCCATCGGC---CA---GCAAGCCCGTAGT---CAGTGAA---GAGGCCATCGAGGTAAATCC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

ACCCGTCGAGCGCCCTGCTCTTTATCGAACAGTACGTGGGCATCCTTAAAGAACTTGCTGTGAAGTATACTTCTCTGGGAAAGCTGCAGGTTCTGGTTCAAGCAGTGGCCCTGCTGCAGCACAAGTCACACTCGGCCTCCGAGCTGGACGACGAGGAGGT---GAAGTACGAGTACGACCTAGACGAGCACTT---CGAAGTGAAGCCGCCGGC---CA---CCAAATCCACTGT---GAGCGAG---GAACTCGTCGAGGGGAACCC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ACCCTTCGAGCGCCCTGCTTTTCATCGAGCAGTATGTCGGCATTCTTATGGAGCTGGCCGCAAAGTACACCTCGCTGGGTAAGCTGCAGGTCCTGGTCCAGGCAGTTGCCCTGTTGCAGCACAAGTCCAGCTCCGCCTCGGAGCTGGATGACGAGGAGGTGGCCAAAAACGAATACGAACTGGACGAACAGTC---------------CTCGTCCTCAAATACCAAGCCCGTGGTGGTGATCGAT---GAGCCCATGGACCC---GCC	Size	Hit Count	Total Norm	Total
No Reads

droAna3

ATCCCAGCAGTGCTCTGCTCTTCATCGAGCAGTATGTGGGCATCCTCATGGAACTGGCCGACAAGTACGCGACGATGGGTAAACTCCAGATTCTGGTGCAGGCTGTGGCACTTCTGCAGCACAAATCTTCGTCTGCCTCGGAACTGGACGACGAGGAAGT---GAAATACGAGTATGAGCTGGACGAGCA---------------GCCGTCGGT---CA---GCAAGCCGGTGGT---GTTCGAA---GAGCCCATGGAGAGTATTCC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................................................................................................................................................GGACGACGAGGAAGT---GAAATACGAGT..............................................................................................	26	1	2.00	2	0	0	0	0	0	2
.....................................................................................................................................................................AATACGAGTATGAGCTGGAC...................................................................................	20	1	1.00	1	1	0	0	0	0	0
...................CTTCATCGAGCAGTATGTGGG....................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0
...........................................................................................................................................................................................GCA---------------GCCGTCGGT---CA---GCAAGC........................................	20	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................................................................................................................T---CA---GCAAGCCGGTGGT---GTTCGA........................	22	1	1.00	1	0	0	1	0	0	0
.........................................................................................................................................................................................................................CA---GCAAGCCGGTGGT---GTTCGAA---GA..................	24	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................AGTATGAGCTGGACGAGCA---------------GC.............................................................	21	1	1.00	1	0	1	0	0	0	0
..............................................................AAGTACGCGACGATGGG.............................................................................................................................................................................................	17	1	1.00	1	0	0	0	1	0	0
...........................................................GACAAGTACGCGACGATGGGT............................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
...............................GTATGTGGGCATCCTCATGGAACTGGCC.................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................TGAGCTGGACGAGCA---------------GCCGTCGGT---C..................................................	25	1	1.00	1	0	1	0	0	0	0
.........GTGCTCTGCTCTTCATCGAGC..............................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................AGCTGGACGAGCA---------------GCCGTCGG.......................................................	21	1	1.00	1	1	0	0	0	0	0

droBip1

ACCCAACCAGTGCCCTGCTCTTCATCGAGCAGTATGTGGGCATCCTCATGGAACTGGCTGCCAAGTACACGATGATGGCCAAACTTCAGGTTCTGGTGCAGGCTGTGGCTCTCCTGCAGCACAAATCTTCCACTGCCACGGAACTGGACGACGAGGAGGT---GAAATACGAGTACGAGCTGGATGAACA---------------GCCTTCGGC---CA---GCAAGCCGGTGGT---GTTCGAA---GAGCCCATGGAGAGTGCTCC	Size	Hit Count	Total Norm	Total
No Reads

dp5

ACCCGTCCAGTGCCCTGCTGTTCATCGAACAGTACGTGGGCATACTGATGGAGCTGGCCGCCAAGTACACATCGCTGGGCAAGCTGCAGGTCCTCGTCCAGGCAGTGGCCCTGCTTCAGCACAAGTCGAACTTCCTCTCTGAGCTGGACGACGAGGAGGT---TCGGTACGAGTATGAGCTGGACGAGCACTT---TGAGGTGAAGCCATCGGC---TA---GCAAGCCAGTGGT---AGCCGAGATTGAGCCTTTAGAGGGCAGCGC	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...................GTTCATCGAACAGTACGTGGGC...................................................................................................................................................................................................................................	22	1	4.00	4	0	3	0	0	1	0	0	0	0	0
...................................................................................................................................................................TCGGTACGAGTATGAGCTGGACGA.................................................................................	24	1	3.00	3	0	1	0	0	0	0	0	0	2	0
................................................................GTACACATCGCTGGGCAAGCT.......................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................TCATCGAACAGTACGTGGGCATAC...............................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	2	0	0
......................CATCGAACAGTACGTGGGC...................................................................................................................................................................................................................................	19	1	2.00	2	0	1	0	1	0	0	0	0	0	0
.....................TCATCGAACAGTACGTGGGC...................................................................................................................................................................................................................................	20	1	2.00	2	0	1	0	0	1	0	0	0	0	0
...............................GTACGTGGGCATACTGATGG.........................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................GTTCATCGAACAGTACGTGG.....................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................CATCGCTGGGCAAGCTGCAGGT.................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................GCACAAGTCGAACTTCCTCTC.................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................GTACGTGGGCATACTGATGGAGCTGGC..................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	1
..................TGTTCATCGAACAGTACGTGGGC...................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................CATCGCTGGGCAAGCTGCAGG..................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................CACAAGTCGAACTTCCTCTCTGA..............................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................TCGGTACGAGTATGAGCTGGACG..................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................TCCTCGTCCAGGCAGTGGCCCTGCTT........................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................GTTCATCGAACAGTACGTGGGCA..................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................C---TA---GCAAGCCAGTGGT---AGCCGAGAT.....................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................GTGGCCCTGCTTCAGCACAA................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................GGTACGAGTATGAGCTGGACGAG................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......CAGTGCCCTGCTGTTCATCGAAC..............................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

ACCCGTCCAGTGCCCTGCTGTTCATCGAGCAGTACGTGGGCATACTGATGGAGCTGGCCGCCAAGTACACTTCGCTGGGCAAGCTGCAGGTCCTCGTCCAGGCAGTGGCCCTGCTTCAGCACAAGTCGAACTTCCTCTCTGAGCTGGACGACGAGGAGGT---TCGGTACGAGTATGAGCTGGACGAGCACTT---TGAGGTGAAGCCATCGGC---TA---GCAAGCCAGTGGT---AGCCGAGATTGAGCCTTTAGAAGGCA--CC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...................GTTCATCGAGCAGTACGTGGGC...................................................................................................................................................................................................................................	22	1	5.00	5	0	1	2	0	0	2
...................................................................................................................................................................TCGGTACGAGTATGAGCTGGA....................................................................................	21	1	2.00	2	2	0	0	0	0	0
.............................................................CAAGTACACTTCGCTGGGC............................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
......................................................................................................................................................................................................................................GTGGT---AGCCGAGATTGAGCCT..............	21	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................................................TCGGTACGAGTATGAGCTG......................................................................................	19	1	1.00	1	0	1	0	0	0	0
..............................................................AAGTACACTTCGCTGGGC............................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
..............................................................................................................CTGCTTCAGCACAAGTCGAACTTCCT....................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................CTCTGAGCTGGACGACGAGGA...............................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................ATGAGCTGGACGAGCACTT---TGA.....................................................................	22	1	1.00	1	1	0	0	0	0	0
.........................................ATACTGATGGAGCTGGCCGCCAA............................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0

droWil2

ATCCGGTGAGTGCCTTATCGTTTATCGAGCAATATGTTGGAATCTTGATGGAATTGGCAGCCAAGTATACCTCGTTAGAGAAACTACAAGTTTTAGTGCAAGCCGTCGCCTTGCTGCAGCATAAATCGAATGCACCCTACGAGCTTGATGATGAGGAAGT---TAAGTACGAGTACGACTTAGATGAGCATGT---AGAGACAAAGCCTCCTAT---AAATATCAAACCCGATGT---------T---GAAGCTGTTGAAGCAAATTC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.....................................................................................................................................................GATGAGGAAGT---TAAGTACGA................................................................................................	20	1	3.00	3	0	0	2	1	0
.......................................................................................................................................................................................................................................ATGT---------T---GAAGCTGTTGAAGC......	19	1	2.00	2	0	2	0	0	0
.....................................................................................................................................................................................................................T---AAATATCAAACCCGATGT---------T---GAAGC...............	25	1	2.00	2	0	2	0	0	0
.....................................TGGAATCTTGATGGAATTGGC..................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
.........................................ATCTTGATGGAATTGGCAGCCAAGT..........................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................................................GT---------T---GAAGCTGTTGAAGCAAA...	20	1	1.00	1	0	0	0	1	0
...............................................................................................GTGCAAGCCGTCGCCTTG...........................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.................................................................................................GCAAGCCGTCGCCTTGCTGCAGCATAAAT..............................................................................................................................................	29	1	1.00	1	0	1	0	0	0
..................................................................................................................................................GATGATGAGGAAGT---TAAGTACGA................................................................................................	23	1	1.00	1	0	0	1	0	0
............................................................................................TTAGTGCAAGCCGTCGCCTTGCT.........................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................GATGAGGAAGT---TAAGTACGAGTAC............................................................................................	24	1	1.00	1	0	0	1	0	0
.............................................TGATGGAATTGGCAGCCAAGTATACCT....................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................GTACGACTTAGATGAGCATGT---A.......................................................................	22	1	1.00	1	0	0	1	0	0
.........GTGCCTTATCGTTTATCGAGCA.............................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
..............................................................................................................................CGAATGCACCCTACGAGCTT..........................................................................................................................	20	1	1.00	1	0	1	0	0	0
.......................................................................................................................................CCTACGAGCTTGATGATGAGGAAGT---T........................................................................................................	26	1	1.00	1	0	0	1	0	0
....................................................................................................................................CACCCTACGAGCTTGATGATGAGGA...............................................................................................................	25	1	1.00	1	0	0	0	1	0
...............................................................................................................................................................................................................................CAAACCCGATGT---------T---GAAGCTGTTGAA........	25	1	1.00	1	0	0	0	1	0
..................................................................................................................................................GATGATGAGGAAGT---TAAGT....................................................................................................	19	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................GATGAGGAAGT---TAAGTAC..................................................................................................	18	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................................GATGT---------T---GAAGCTGTTGAAG.......	19	1	1.00	1	0	0	0	0	1
......TGAGTGCCTTATCGTTTATCGAGCAATA..........................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................AGTACGACTTAGATGAGCATGT---A.......................................................................	23	1	1.00	1	0	0	1	0	0
.........................................................................................................................................................................CGAGTACGACTTAGATGAGC...............................................................................	20	1	1.00	1	1	0	0	0	0
.............................................................................................TAGTGCAAGCCGTCGCCTTGCTGCAGC....................................................................................................................................................	27	1	1.00	1	0	1	0	0	0

droVir3

ATCCTTCAAGTGCATTGTTATTTATTGAGCAATATGTCGGGATTTTGACAGAATTAGCATTCAAGTATCCTTCAATCGTAAAACTACAAGTACTTGTACAAGCTGTTGCTTTGCTTCAGCACAAATCCTATACGTCTTCAGAACTTGATGACGAAGAAGG---AAAATTTGAATATGAACTGGATTACG---------AAACCAAATC---AAA---CA---TAAAAATGTTTGC---AAACGAAATAGAGTCTTTCGATGGAA--GC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..............................................................................TAAAACTACAAGTACTTGTACAAGCTGT..................................................................................................................................................................	28	1	5.00	5	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TTGC---AAACGAAATAGAGTCTTTCGATG.......	27	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................ACTTGATGACGAAGAAGG---AAAATTT..................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................TGATGACGAAGAAGG---AAAATTTGAATA.............................................................................................	27	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TAGCATTCAAGTATCCTTCAATCGTA............................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................ATCCTTCAATCGTAAAACTACAAGTACTT.............................................................................................................................................................................	29	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TTGC---AAACGAAATAGAGTCTTTCGATGG......	28	1	2.00	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................TGATGACGAAGAAGG---AAAATTTGAAT..............................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................TACAAGTACTTGTACAAGCTGTTGCT..............................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................TACAAGTACTTGTACAAGCTGTTGC...............................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................TCAGAACTTGATGACGAAGAAGG---AAAAT....................................................................................................	28	1	2.00	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................TGC---AAACGAAATAGAGTCTTTCGATG.......	26	1	2.00	2	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................TTTGACAGAATTAGCATTCAAGTAT........................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................TTTTGACAGAATTAGCATTCAAGTAT........................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TAGCATTCAAGTATCCTTCAATCG..............................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................TTGACAGAATTAGCATTCAAGTATCCT.....................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................TTTGACAGAATTAGCATTCAAGTATC.......................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....TTCAAGTGCATTGTTATTTATTGAG...............................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TACTTGTACAAGCTGTTGCTTTGCTTCA......................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................AAAACTACAAGTACTTGTACAAGCTGTT.................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................AGAACTTGATGACGAAGAAGG---.........................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TAAAACTACAAGTACTTGTACAAGCTG...................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................TTCAAGTATCCTTCAATCGTAAAACTA......................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................TTCAGAACTTGATGACGAAGAAG.............................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................CGAAGAAGG---AAAATTTGAA...............................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TACTTGTACAAGCTGTTGCTTTGCTT........................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................TTCAGAACTTGATGACGAAGAAGG---.........................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................TTTGC---AAACGAAATAGAGTCTTTCGATG.......	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................AACTGGATTACG---------AAACCAAATC---AAA---C..................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................CTTGATGACGAAGAAGG---AAAATTTGAAT..............................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................AATAGAGTCTTTCGATGGAA--..	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................ATGACGAAGAAGG---AAAATTTGAATATGAAC........................................................................................	30	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................CTTCAGCACAAATCCTATACGTCTTC.................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................GCAATATGTCGGGATTTTGACAGAAT......................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................AACTTGATGACGAAGAAGG---AAAATTT..................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................TGC---AAACGAAATAGAGTCTTTCGATGGA.....	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................AATGTTTGC---AAACGAAATAGAGTCT..............	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................TTTGACAGAATTAGCATTCAAG...........................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................GGATTACG---------AAACCAAATC---A........................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................TGC---AAACGAAATAGAGTCTTTCGA.........	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................TTATTGAGCAATATGTCGGGATTTTC.............................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........TGCATTGTTATTTATTGAGCAATATGTC......................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................GCACAAATCCTATACGTCTTCAGAACT...........................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................TCAATCGTAAAACTACAAGTACTTG............................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TAAAACTACAAGTACTTGTACAAGCT....................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................TACAAGCTGTTGCTTTGCTTC.......................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................ATTTGAATATGAACTGGATT..................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................AATTTGAATATGAACTGG.....................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TATACGTCTTCAGAACTTGA........................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TTGAATATGAACTGGATTACG---------AAACCAA...............................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................AGAACTTGATGACGAAGA...............................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................ACTTGATGACGAAGAAGG---AAAATT...................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................TTCAAGTATCCTTCAATCGTAAAACTACA....................................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................ATTAGCATTCAAGTATCCTTCAATCGTA............................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................AATCGTAAAACTACAAGTACTTG............................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................TTTATTGAGCAATATGTCGGGATTT...............................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................TGTCGGGATTTTGACAGAATTAGCAT................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................AGCACAAATCCTATACGTCTT..................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................AATAGAGTCTTTCGATGGA.....	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............ATTGTTATTTATTGAGCAATATGTCGGG...................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................GAATATGAACTGGATTACG---------AAACCAAA..............................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................TTTGAATATGAACTGGATTACG---------AAACC.................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................TATTTATTGAGCAATATGTCGGGATTT...............................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................AATGTTTGC---AAACGAAATAGAGTCTT.............	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................TGCTTCAGCACAAATCCTATACGTCTT..................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.......................................................................TCAATCGTAAAACTACAAGTACTTGT...........................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........TGCATTGTTATTTATTGAGCAATATG........................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................TGACAGAATTAGCATTCAAGTATCC......................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TGAGCAATATGTCGGGATTTTGACAGAA.......................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................ATCCTTCAATCGTAAAACTA......................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................AAAACTACAAGTACTTGTACAAGCTGT..................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................ATTGAGCAATATGTCGGGATTTTGA............................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................TCAGAACTTGATGACGAAGAAGG---AAA......................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................AAAAATGTTTGC---AAACGAAATAGAGTCT..............	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................CACAAATCCTATACGTCTT..................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
......................................................TAGCATTCAAGTATCCTTCAATCGT.............................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................CAGAACTTGATGACGAAGAAGG---AA.......................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............TGTTATTTATTGAGCAATATGTCGGT...................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................CAGAACTTGATGACGAAGAA..............................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.TCCTTCAAGTGCATTGTTATTTATTGA................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................TTAGCATTCAAGTATCCTTCAATCGTA............................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................TTATTGAGCAATATGTCGGGATTTT..............................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................TAGAGTCTTTCGATGGAA--GC	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TGAGCAATATGTCGGGATTTTGACAGA........................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........AGTGCATTGTTATTTATTGAGCAATATGTCGGGA..................................................................................................................................................................................................................................	34	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...........GCATTGTTATTTATTGAGCAAT...........................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATCCTTCAACTGCATTGCAATTTATTGAGCAATATGTCGGAATTTTGACAGAATTGGCAGCCAGATACACGTCTATCGGAAAGCTGCAAGCTCTTGTGCAAGCTGTTGCTCTACTTCAGCACAAAACGAATACATGCATAGAATTGGATGACGAGGAAGT---GAAGGTGGAATATGAACTAGATGGACATTC---TGAAACAAAACCAACTAC---AA---ATAAAAATTTTGC---CAATGAAATTGATTCCTTTGAGGGC-ACCA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.....................................................................................................................................................GACGAGGAAGT---GAAGGTGGA................................................................................................	20	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................................GAGGAAGT---GAAGGTGGAATATG...........................................................................................	22	1	1.00	1	1	0	0	0	0	0
.....................................CGGAATTTTGACAGAATTGGCAGC...............................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................ATGACGAGGAAGT---GAAGGTGGAATATGA..........................................................................................	28	1	1.00	1	0	0	0	0	0	1

droGri2

ATCCCTCGAGCGCATTGTTATTCATCGAGCAATATGTCGGCATATTGACGGAACTGGCTGTTAAATACACCTCAATTGGCAAGCTACAAGCCTTGGTTCAAGCTGTTGCCTTGCTGCAGCACAAATCGAATACTTTGTCGGAGCTCGATGATGAAGAAGT---CAAATTGGAATATGAACTCGATGGCCATTCGTCGGATACAAAGCCGGCCAC---CA---ATAAAGCTGTCGT---TAGCGATATAGAGCCCTTGGATGGGAATCT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_16003

2r:20432162-20432311 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-16.2	-15.8	-15.7