ID:

dsi_15962

 Coordinate:

3r:19635731-19635979 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.5 -18.4 -18.3 -18.2

Flybase annnotation

CDS [3r_19634934_19636580_+]; exon [3r_19634267_19636770_+]

No Repeatable elements found

Sense Strand Reads

#############################################################################################################################################################################################################################################################################################################################################################
CTAACCTTGCCGGGACTTCTCTTCCTCTGCTACTACTGGATCGTTCCGGAGTCTGCCCGTTGGCTCTTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACAAGGTGGAGGTGCCCAACGAAATCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGCAGGACGAGATGGCGGCCTCCCAACCAGCGGCCACTGTGTTCGATCTCCTGCGCTATCCCAATCTTCGACGGAAAACCCTGCTCATCTTCTTCGATTGGTTCGTGAACAGTGGCGTTTACTACGGCCTGTCGTGGAACACCAACAATCTGGGTGGAAACC
************************************************************************************************....((........(((.(((..........((.((...(((............)))...)).)).........))).))))).************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902009
testis
 M024
male body		 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 M053
female body
 O001
Testis
 SRR1275483
Male prepupae		 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
.....................................................................................................................................................................GACGAGGTGGCCGAA......................................................................................................................................................................... 15 0 1 19.00 19 19 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAACA....................................................................................................................................................................... 17 1 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAAA........................................................................................................................................................................ 16 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAAC........................................................................................................................................................................ 16 1 5 7.40 37 37 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAATA....................................................................................................................................................................... 17 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAAAA....................................................................................................................................................................... 17 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAAT........................................................................................................................................................................ 16 1 3 2.67 8 8 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAAAC....................................................................................................................................................................... 17 1 2 2.50 5 5 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGCA......................................................................................................................................................................... 15 1 12 2.08 25 25 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................TGGTTTGTGAACAGTGGCGTTT.......................................... 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGATA........................................................................................................................................................................ 16 1 13 1.15 15 15 0 0 0 0 0 0 0 0 0 0 0
................................................................................................GTGATCATCGAGAAGGCGGCC........................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................AAGGGTCGCAAGGATGAGGTTT............................................................................................................................................................................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................ACTACGGCCTGTCGTGGAACACCG.................. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................TTGGTTTGTGAACAGTGGCGT............................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................CATCTTCTTCGATTGGTTCGT........................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................TTGATGAAGGGTCGCAAGGAT...................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTTGTGATCATCGAGAAGGCG........................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TCAATGTCCTGCGCTATCCTAATC................................................................................................ 24 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................CTCCCAACCAGCGGCCACTGG.......................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................CGAAAAGAAGAAGCAGGACGG........................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................AGAAGCAGGACGAGATGGCCGTA.............................................................................................................................................. 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................CTCTGCTACTACTGGATC................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................TCTGCTACTACTGGATCGTTC............................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................ATCTTCGACGGAAAACCC................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................ATGAAGGGTCGCAAGGATGA.................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................AATGAAATCTACGAGCAGCT............................................................................................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................CATCTTCTTCGATTGGTTCGG........................................................ 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAACAG...................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CTTTGTGATCATCGAGAAG.............................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................AAGAAGAAGCAGGACGAGATGT................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................CTTTGTGATCATCGAGAAGGC............................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................AGCAGCTGGTGGACGAGGTGG.............................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................CTGCTCATCTTCTTCGATTGG............................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CCACTGTGTTCGATCTCCTGC............................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................TGGTTTGTGAACAGTGGCGT............................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CTGGCTGACGAGGTGGCCGA.......................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGTA......................................................................................................................................................................... 15 1 8 0.88 7 7 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGGAA........................................................................................................................................................................ 16 1 9 0.67 6 6 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGTAA........................................................................................................................................................................ 16 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGGA......................................................................................................................................................................... 15 1 20 0.65 13 12 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................GTTGATGGACGAGGTGGCCGAGA........................................................................................................................................................................ 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AACAAGGTGGAGTTGCCCAAC............................................................................................................................................................................................................. 21 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................TCTGCTGCTACTGGGTCGTT................................................................................................................................................................................................................................................................................................................ 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAAACG...................................................................................................................................................................... 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAATC....................................................................................................................................................................... 17 2 20 0.45 9 9 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGGAAA....................................................................................................................................................................... 17 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGATCA....................................................................................................................................................................... 17 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAAG........................................................................................................................................................................ 16 1 11 0.36 4 4 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................TCGGCCTGTAGTGGAACA..................... 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................GCTACTACTGAATCGT................................................................................................................................................................................................................................................................................................................. 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAATT....................................................................................................................................................................... 17 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CTCATGGACGAGGTGGCCGAGA........................................................................................................................................................................ 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GGCCTGTCGTGAGACA..................... 16 2 12 0.25 3 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GGCGGACGAGGTGGCCGAGA........................................................................................................................................................................ 20 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ACAAGAAGCAGGACGACAT..................................................................................................................................................... 19 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAACAA...................................................................................................................................................................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGGAAAC...................................................................................................................................................................... 18 2 10 0.20 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGGAAC....................................................................................................................................................................... 17 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAACAC...................................................................................................................................................................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................GCCTGTCGTGGGACA..................... 15 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0
................................CTACTGGTTCCTTCCGAAGT......................................................................................................................................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
........GCCGGGTGTTCTCTTCCT................................................................................................................................................................................................................................................................................................................................... 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GGTTGACGAGGTGGCC............................................................................................................................................................................ 16 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAAAGG...................................................................................................................................................................... 18 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................ATGGTCGCAAGGCTGA.................................................................................................................................................................................................................................................................... 16 2 20 0.15 3 0 0 0 0 0 0 0 0 0 3 0 0
............................................................................................................AAGGAGGCCAAGGAGAAC............................................................................................................................................................................................................................... 18 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGTAAAT...................................................................................................................................................................... 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAACAT...................................................................................................................................................................... 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGTACA....................................................................................................................................................................... 17 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AGCCTGCGGACGAGGTGGCCG........................................................................................................................................................................... 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAGAAGGA.................................................................................................................................................................... 20 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAACG....................................................................................................................................................................... 17 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................GCCTGTCGTGAGACA..................... 15 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GGCCTGTCGTGAGAC...................... 15 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GACCTGTCGTGGTACA..................... 16 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................GACGAGGTGGCCGAAAGGG..................................................................................................................................................................... 19 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGTAAC....................................................................................................................................................................... 17 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................CCTGTCGTGGAGCAGCAA................. 18 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CAGATGGTGGACGCGGT................................................................................................................................................................................ 17 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGAACGG...................................................................................................................................................................... 18 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTGGCCGACCAG...................................................................................................................................................................... 18 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGGTCGTCCAAAAGA..................................................................................................................................................................... 19 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TAGGTTGAGGCCGTTGTGA......................................................................................................................................................................................................................................................... 19 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTCGAACGTCTGCGCTATC...................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

GATTGGAACGGCCCTGAAGAGAAGGAGACGATGATGACCTAGCAAGGCCTCAGACGGGCAACCGAGAACTACTTCCCAGCGTTCCTACTCCGGAAACACTAGTAGCTCTTCCGCCGGTTCCTCTTGTTCCACCTCCACGGGTTGCTTTAGATGCTCGTCGACCACCTGCTCCACCGGCTTTTCTTCTTCGTCCTGCTCTACCGCCGGAGGGTTGGTCGCCGGTGACACAAGCTAGAGGACGCGATAGGGTTAGAAGCTGCCTTTTGGGACGAGTAGAAGAAGCTAACCAAGCACTTGTCACCGCAAATGATGCCGGACAGCACCTTGTGGTTGTTAGACCCACCTTTGG
*************************************************************************************************************************************************************************....((........(((.(((..........((.((...(((............)))...)).)).........))).))))).************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 M023
head
 SRR1275483
Male prepupae		 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M053
female body
....................................................................................................................................CTCCACGGGTTGCTTTAGATG.................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.......................................................................................CTCCGGAAACACTAGTAGCTC................................................................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................GACGATGATGACCTAGTAAGG.............................................................................................................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................GAGACGATGATGACCTAGTAA................................................................................................................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCGCCGGTGACACAAGCTAGA................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCCGGTGACACAAGCTAGAGG............................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................TCTTCGTCCTGCTCTACCGCC................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GGTGACACAAGCTAGAGGAC............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TAGAGGACGCGATAGGGTT.................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CGGGTTACTTTAGATGCTCGT............................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................TTGCCGGTGACACAAGCTAGAGG............................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................AAATGAGGTCGGACAGTACC......................... 20 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................TTTTGGTTCGAGTAGAAGATGC.................................................................. 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................TTTTTGGACGAGAAGATGAAGC.................................................................. 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................CGCTAATCATGCCGGACAAC............................ 20 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................................................................................AGCAACTTCTGGTTGTT.............. 17 2 20 0.20 4 0 0 0 0 0 4 0 0 0 0
...........................................................................................................CTTCCGCCGGCTCCTCTT................................................................................................................................................................................................................................ 18 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................................................................................AGCAACTTCTGGTTGTTA............. 18 2 7 0.14 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................GCAACTTCTGGTTGTTA............. 17 2 20 0.10 2 0 0 0 0 0 2 0 0 0 0
................................................................................................................................................................................................................................................................................................................AAATGAGGTCGGACAGTAC.......................... 19 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................GATAGAGTTAGAAGC............................................................................................ 15 1 16 0.06 1 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................................................................................AGTAGAAGGTAACCAAGC......................................................... 18 2 19 0.05 1 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................................GGCGTTAGGGTTAGAAACT........................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0
.........GGCCCAGAAGAAAAGGAGG................................................................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................GGCGGGTTGGTCGCC................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................................................................................GTAGAAGTAGCTAGCAAAGC......................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:19635681-19636029 + dsi_15962 CTAACCTTGCCGGGACTTCTCTTCCTCTGCTACTACTGGATCGTTCCGGAGTCTGCCCGTTGGCTCTTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACAAGGTGGAGGTGCCCAACGAAATCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGATGGCGGCCTCCCAA---CCAGCGGCCACTGTGTTCGATCTCCTGCGCTATCCCAATCTTCGACGGAAAACCCTGCTCATCTTCTTCGATTGGTTCGTGAACAGTGGCGTTTACTACGGCCTGTCGTGGAACACCAACAATCTGGGTGGAAACC
droSec2 scaffold_0:20437740-20438088 + CTAACCTTGCCGGGACTGCTCTTCCTCTGCTACTATTGGATCATTCCGGAGTCTGCCCGTTGGCTCTTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCAGCCAAGGAGAACAAGGTGGAGGTGCCCAATGAAATCTACGAACAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGATGGCCGCCTCCCAA---CCAGCGGCCACTGTGTTCGATCTCCTGCGCTATCCCAATCTTCGACGGAAAACCCTGCTCATATTCTTCGATTGGTTTGTGAACAGTGGCGTTTACTACGGCCTGTCGTGGAACACCAACAATCTGGGTGGAAACC
dm3 chr3R:20103414-20103762 + ATAACCTTGCCGGGACTGCTCTTCCTTTGCTACTACTGGATCATTCCGGAGTCTGCCCGTTGGCTCTTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACAAGGTGGAGGTGCCCAATGAAATCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGATGGCCGCCTCCCAA---CCAGCGGCCACTGTGTTCGATCTCCTGCGCTATCCGAATCTTCGACGGAAAACCCTGCTCATCTTCTTCGATTGGTTTGTGAACAGTGGCGTTTACTACGGCCTGTCGTGGAACACCAACAATCTGGGTGGAAACC
droEre2 scaffold_4820:7959189-7959537 - CTGACCTTGCCGGGATTGCTCTTCCTGTGCTACTACTGGATCATTCCGGAGTCGGCGCGTTGGCTCCTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACAAGGTGGAGGTGCCCAACGAAGTCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAAAAGAAGC---AGGACGAGATGGCCGCATCCCAA---CCAGCGGCCACCGTGTTCGATCTCCTGCGCTATCCCAATCTTCGCCGGAAAACCCTGCTGATCTTCTTCGACTGGTTTGTGAACAGTGGCGTGTACTACGGCCTGTCGTGGAACACCAACAACCTCGGTGGAAACC
droYak3 3R:26402346-26402694 - CTGACCTTGCCGGGATTGCTCTTCCTCTGCTACTACTGGATCATTCCGGAGTCGGCCCGTTGGCTGCTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACAAGGTGCAGGTGCCCAATGAAATCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGATGGCCGCCTCCCAG---CCGGCGGCCACCGTGTTCGATCTGCTCCGCTATCCCAATCTGCGCCGGAAAACGCTGCTGATCTTCTTCGATTGGTTTGTGAACAGTGGCGTGTACTATGGACTCTCGTGGAACACGAACAACCTGGGCGGCAACC
droEug1 scf7180000409798:282498-282846 - CTGACTTTGCCTGGACTCCTATTCATTTGCTACTACTGGATCATTCCGGAGTCTGCCCGTTGGCTTTTGATGAAGGGTCGCCAAGAGGAGGCCTTTGTGATTATCAAAAAGGCAGCCAAGGAAAACCGGGTTGAAATACCCAGTGAAATCTATGAGCAGCTTGTGGAAGAGGTGGCCGAAAAGAAGAAGC---TGGACGAGCAGACGGCCTCTCAG---CCAGCGGCTACCGTATTTGATCTCCTTCGTTACCCAAATCTTCGCCGGAAAACCTTGCTGATTTTCTTCGATTGGTTTGTAAACAGTGGTGTTTACTATGGCCTCTCCTGGAACACGAACAATTTGGGTGGAAATC
droBia1 scf7180000302136:459131-459479 + CTTACCTTGCCGGGACTCCTCTTCATTTGCTACTACTGGATCATTCCGGAGTCTGCCCGCTGGCTTCTGCTCAAGGGGCGCCAGGAGCAGGCCTTTGTGATCATCAAGAAGGCGGCCAAGGAGAACCGAGTGCAGATTCCCAATGAGATCTACGATCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAAC---AAGATGAGCTGACAGCCAATCAG---CCGGCGGCCACCGTCTTCGATCTCCTCCGGTTTCCCAATCTCCGCCGGAAGACCCTCCTCATTTTCTTCGATTGGTTTGTGAACAGTGGTGTCTACTATGGCCTCTCGTGGAACACGAACAACCTGGGTGGCAACC
droTak1 scf7180000415769:2337951-2338298 - TTGACCCTCCCGGGACTCCTCTTCATTTGCTACTATTGGATCATTCCGGAGTCTGCCCGCTGGCTTTTGCTCAAGGGTCGCCAGGAGGAGGCCTTTGTGATCATCAAAAAGGCGGCCAAGGAGAACCGGGTTCAAATACCCAGTGAAATCTACGAGCAGCTGGTGGATGAGGTGGCGGAAAA-AAGAAAC---AAGATGAACTGACGGCCTCCCTG---CCAGCGGCTACTGTGTTTGATCTCCTAAGATATCCCAATCTCCGCAGGAAAACCCTCCTCATCTTCTTCGATTGGTTTGTGAATAGTGGTGTTTACTACGGGCTCTCCTGGAACACAAATAACCTGGGTGGCAATC
droEle1 scf7180000491008:409614-409962 + CTGACGCTGCCGGGACTGCTCTTCGTTTGCTACTACTGGATCATTCCGGAGTCGGCCCGCTGGCTTTTGCTCAAGGGTCGCAAGGACGAGGCCTTCGTGATCATCGAGAAGGCGGCCAAGGAGAACCGGGTTGAGATTCCCAGCGAGATCTACGAGCAGCTGGTGGACGAGGTGGCCGAGAAGAAGAAAC---AGGACGAACTGACGGCCTCCCAG---CCGGCGGCCACCGTATTTGATCTGCTCCGGTTTCCCAATCTTCGCCGGAAAACCCTGTTGATCTTCTTCGATTGGTTTGTGAACAGCGGCGTGTACTACGGTCTGTCGTGGAACACTAACAACCTGGGCGGCAATC
droRho1 scf7180000779477:184230-184578 + CTGACGCTGCCGGGACTCCTCTTCATTTGCTACTACTGGATCATTCCGGAGTCTGCCCGGTGGCTCTTGCTCAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACCGGGTGGAGATACCCAATGAGATCTATGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAAC---AGGATGAGCTGACGGCTTCCCAG---CCGGCGGCCACCGTATTCGATCTCCTCCGGTTTCCCAATCTTCGCCGGAAAACCCTGTTGATCTTCTTCGATTGGTTTGTGAACAGTGGCGTGTACTATGGACTGTCCTGGAACACAAACAACCTCGGCGGTAATC
droFic1 scf7180000453912:1269469-1269817 + CTTACTCTACCGGGATTGCTATTCCTTTGCTACTATTGGATCATCCCGGAATCTGCGCGATGGCTTCTGCTGAAGGGTCGCCAGGAGGAGGCCTTCGTTATCATCGAGAAGGCGGCAAAGGAGAACAAGGTGAAGATACCCAACGAGATCTACGATCAGCTGGTGGAGGAGGTGGCCGAAAAGAAGCGAC---AGGATGCCCTGACTGCATCTCAA---CCGGCAGCCACAGTCTTCGATCTCCTGCGATATCCGAATCTCCGGAGGAAAACCCTCTTGATTTTTTTCGATTGGTTTGTGAACAGTGGTGTGTACTATGGACTCTCGTGGAACACCAACAATCTCGGTGGCAATC
droKik1 scf7180000302475:547046-547394 + CTGACTTTGCCAGGGCTCCTCTTCATCTGCTACTACTGGATCATTCCGGAGTCTGCCCGCTGGCTGCTACTAAAGGGTCGCAAAGATGAGGCATTCGTGATCATCAAAAAGGCAGCCAAGGAGAACCGGGTCGAGATACCCAGCGAGATCTATGAGCAGCTGGTGGACGAGGTGGCCGAGAAGAAGAAAC---AAGATGAACTGACAGCTTCCCAA---CCGGCGGCAACGGTGTTTGATCTCCTCCGATACCCCAATCTTCGCCGGAAGACCCTGCTGATCTTCTTCGATTGGTTCGTAAACAGCGGCGTCTACTACGGCCTCTCGTGGAACACCAACAACCTGGGGGGAAACC
droAna3 scaffold_13340:22392720-22393068 - CTGACCCTACCGGGTCTTCTCTTCATCTGCTATTACTGGATAGTCCCTGAATCGGCTCGCTGGCTCTTGCTGAAAGGCCGAAAGGACGAGGCCTTTGTGATAATCGATAAGGCAGCCAAGGAGAATCGAGTGGAGATACCAAACGCGATCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGCTCACAGCCTCTCAG---CCGGCAGCCACAGTGTTTGATCTCCTCCGTTACCCGAATCTACGCCGGAAGACTCTTCTCATCTTTTTCGACTGGTTTGTGAACAGTGGTGTTTACTACGGACTGTCCTGGAACACAAACAACCTGGGTGGCAATC
droBip1 scf7180000396721:761986-762334 + CTCACCCTTCCGGGACTTCTCTTCCTCTGCTACTATTGGATTGTGCCGGAATCGGCTCGCTGGCTCTTGCTCAAAGGCCGCAAGGACGAGGCCTTTGTTATAATCGAAAAGGCAGCCAAGGAGAATCGAGTGGAGATACCCAACGAGATCTACGAGCAGCTGGTCGAAGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGCTGACAGCCTCCCAG---CCGGCAGCCACCGTGTTCGATCTCCTGCGGTACCCGAATCTGCGCCGGAAAACCCTGCTCATCTTCTTCGATTGGTTTGTGAACAGCGGTGTCTACTACGGACTCTCCTGGAACACCAACAATCTGGGTGGCAACC
dp5 2:14120374-14120722 + CTGACTCTGCCGGGACTCCTCTTCGTCTGCTACTACTGGATCATACCGGAGTCCGCACGCTGGCTGCTGCTCAAGGGGCGCAAGGAAGAGGCCTTCGTGATCATTGAGAAGGCTGCCAAGGAGAACAGGGTGGAGATTCCCAGCGAGATCTACGAGCAGCTAGTGGAGGAGGTGGCCGAAAAGAAGAAAC---AGGACGAGCTGACGGCCTCCCAG---CCGGCGGCCACAGTCTTCGACCTCCTGCGGCATCCGAATCTGCGGCGCAAGACGCTGCTCATCTTCTTCGATTGGTTCGTCAACAGCGGCGTCTACTATGGGCTGTCGTGGAACACCAACAACCTGGGGGGCAACC
droPer2 scaffold_0:6321054-6321402 - CTCACGCTCCCAGGACTCCTCTTCGTCTGCTACTACTGGATCATACCGGAGTCCGCCCGCTGGCTGCTGCTCAAGGGGCGCAAGGAAGAGGCCTTCGTGATCATTGAGAAGGCTGCCAAGGAGAACAGGGTGGAGATTCCCAGCGAGATCTACGAGCAGCTGGTGGAGGAGGTGGCCGAAAAGAAGAAAC---AGGACGAGCTGACGGCCTCCCAG---CCGGCGGCCACAGTCTTCGACCTTTTGCGGCATCCGAATCTGCGTCGCAAGACGCTGCTCATCTTCTTCGATTGGTTCGTCAACAGCGGCGTCTACTATGGGCTATCGTGGAACACCAACAACCTGGGGGGCAACC
droWil2 scf2_1100000004902:3165846-3166194 + CTGACTCTTCCAGGATTGGTTTTCCTTTGTTATTATTGGCTTGTGCCCGAGTCGGCACGTTGGCTGCTTAGCAAGGGACGGAAAGAAGAATCGTTTGTGATTATTGAAAAGGCAGCCAAAGTCAATAAAGTAGAAATTCCAAGCCAGATCTACGATCAATTAGTCGAGGAGGTGGCAGAGAAGAAGAAAC---AAGACGAATTGGCCTCGTCTCAG---CCAGCAGCTTCTGTACTGGATCTTTTGCGTTATCCGAATCTTCGCCGCAAAACCCTGCTGATCTTTTTCGATTGGTTTGTCAACAGTGGCGTCTACTATGGTCTCTCGTGGAATACAAACAATCTGGGAGGGAATC
droVir3 scaffold_13047:10940777-10941125 + CTGACGCTGCCCGGTCTGCTGTTCATGTGCTACTATTGGATCGTGCCCGAGTCTGCGCGCTGGCTGCTCTCCAAGGGACGCAAGGAGGAGGCCTTTGTGATCATTGAGAAGGCGGCCAAGGTCAACCGCGTGCAGATACCCAGCGAAATCTACGAACAGCTTGTCGAGGAGGCAGCCGAAAAGAAGCGCA---AGGATGAGCTAGCCGCCGCAGAG---CCCTCGGCATCCGTGTTCGATCTGCTGCGCTATCCGAATCTGCGCCGAAAAACGCTGCTCATCTTTTTCGACTGGTTCGTCAATAGCGGCGTCTACTATGGTCTCTCGTGGAATACGAACAACCTGGGCGGCAATC
droMoj3 scaffold_6540:30832860-30833208 - ATCACGCTGCCCGGCCTGCTCTTCATGTGCTACTACTGGATTGTGCCGGAGTCGGCGCGCTGGCTGCTGTCCAAGGGACGCAAGGACGAGGCCTTCGTGATCATCGAGAAGGCGGCCCGGGTCAATGGCGTGGAAATACCCAGCCAGATCTATGCCCAGCTAGTCGATGAGG---CCGAAGAGATTAATCGTAAGAATGCCTTGGCCGCCGCCCAA---CCAGCAGCCTCCGTGTTCGATCTGCTGCGGTATCCCAACTTGCGGCGCAAGACGCTGCTCATCTTCTTCGACTGGTTCGTGAACAGCGGCGTCTACTACGGCCTCTCGTGGAACACGAACAACCTGGGCGGCAATC
droGri2 scaffold_14624:767649-767997 + CTGACTTTGCCGGGTCTGGTTTTTATGGGCTACTATTGGCTAATACCCGAATCGGCACGTTGGCTGCTCTCGAAGGGTCGCAGCGAGGAGGCGTTTGTCATCATTGAGCGGGCGGCCCGTGTCAATCGTGTCCAGATACCCAGCGAGATCTACGACCAGCTTGTCCGCGAGGAGTCGGCACAGAAGGAGC---AGGCGCAG---ACTGCCTCGCAGCAACCATCCGCATCCGTTTGGGACTTGCTGCGTTATCCGAACTTGCGGCGCAAAACGTTGATCATCTTTTTCGATTGGTTCGTCAACAGTGGCGTCTACTACGGCCTCTCCTGGAACACCAATAATCTGGGTGGCAATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTAACCTTGCCGGGACTTCTCTTCCTCTGCTACTACTGGATCGTTCCGGAGTCTGCCCGTTGGCTCTTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACAAGGTGGAGGTGCCCAACGAAATCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGATGGCGGCCTCCCAA---CCAGCGGCCACTGTGTTCGATCTCCTGCGCTATCCCAATCTTCGACGGAAAACCCTGCTCATCTTCTTCGATTGGTTCGTGAACAGTGGCGTTTACTACGGCCTGTCGTGGAACACCAACAATCTGGGTGGAAACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................GACGAGGTGGCCGAA...............................................................................................................................................................................15119.0019000000000019000000
.....................................................................................................................................................................GACGAGGTGGCCGAAA..............................................................................................................................................................................1618.00800000000008000000
.....................................................................................................................................................................GACGAGGTGGCCGAAC..............................................................................................................................................................................1657.4037000000000037000000
.....................................................................................................................................................................GACGAGGTGGCCGAAAA.............................................................................................................................................................................1713.00300000000003000000
.....................................................................................................................................................................GACGAGGTGGCCGAAT..............................................................................................................................................................................1632.67800000000008000000
.....................................................................................................................................................................GACGAGGTGGCCGAAAC.............................................................................................................................................................................1722.50500000000005000000
................................................................................................GTGATCATCGAGAAGGCGGCC..............................................................................................................................................................................................................................................2111.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................ACTACGGCCTGTCGTGGAACACCG..................2411.00110000000000000000
......................................................................................................................................................................................................................................................................................CATCTTCTTCGATTGGTTCGT........................................................2111.00101000000000000000
..................................................................TTGATGAAGGGTCGCAAGGAT............................................................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................................................TTTGTGATCATCGAGAAGGCG.................................................................................................................................................................................................................................................2111.00100000000000001000
.................................................................................................................................................................................................................CTCCCAA---CCAGCGGCCACTGG..........................................................................................................................2111.00101000000000000000
................................................................................................................................................................................CGAAAAGAAGAAGC---AGGACGG...........................................................................................................................................................2111.00100100000000000000
........................CTCTGCTACTACTGGATC.........................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.........................TCTGCTACTACTGGATCGTTC.....................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
................................................................................................................................................................................................................................................................ATCTTCGACGGAAAACCC.................................................................................1811.00110000000000000000
.....................................................................ATGAAGGGTCGCAAGGATGA..........................................................................................................................................................................................................................................................................2011.00100000000000001000
......................................................................................................................................................................................................................................................................................CATCTTCTTCGATTGGTTCGG........................................................2111.00100100000000000000
............................................................................................CTTTGTGATCATCGAGAAG....................................................................................................................................................................................................................................................1911.00100000000000001000
....................................................................................................................................................................................AAGAAGAAGC---AGGACGAGATGT......................................................................................................................................................2211.00100000000000001000
............................................................................................CTTTGTGATCATCGAGAAGGC..................................................................................................................................................................................................................................................2111.00100000000000000001
..........................................................................................................................................................AGCAGCTGGTGGACGAGGTGG....................................................................................................................................................................................2111.00100000000000001000
.................................................................................................................................................................................................................................................................................CTGCTCATCTTCTTCGATTGG.............................................................2111.00100000010000000000
..................................................................................................................................................................................................................................CCACTGTGTTCGATCTCCTGC............................................................................................................2111.00101000000000000000
.....................................................................................................................................................................GACGAGGTGGCCGAATC.............................................................................................................................................................................17200.45900000000009000000
.....................................................................................................................................................................GACGAGGTGGCCGAAG..............................................................................................................................................................................16110.36400000000004000000
.....................................................................................................................................................................GACGAGGTGGCCGAATT.............................................................................................................................................................................17200.25500000000005000000
.....................................................................................................................................................................GACGAGGTGGCCGAACG.............................................................................................................................................................................17200.10200000000002000000
droSec2
CTAACCTTGCCGGGACTGCTCTTCCTCTGCTACTATTGGATCATTCCGGAGTCTGCCCGTTGGCTCTTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCAGCCAAGGAGAACAAGGTGGAGGTGCCCAATGAAATCTACGAACAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGATGGCCGCCTCCCAA---CCAGCGGCCACTGTGTTCGATCTCCTGCGCTATCCCAATCTTCGACGGAAAACCCTGCTCATATTCTTCGATTGGTTTGTGAACAGTGGCGTTTACTACGGCCTGTCGTGGAACACCAACAATCTGGGTGGAAACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................GAAAAGAAGAAGC---AGGACGAGATGGC.....................................................................................................................................................2611.0010100
...................................................................TGATGAAGGGTCGCAAGGAT............................................................................................................................................................................................................................................................................2011.0011000
.............................................................................................................................................................................................................................................................................................TTCGATTGGTTTGTGAAC....................................................1811.0010010
...............................................................................................TGTGATCATCGAGAAGGCAGC...............................................................................................................................................................................................................................................2111.0011000
..................................................................TTGATGAAGGGTCGCAAGG..............................................................................................................................................................................................................................................................................1911.0010100
................................................................................................................................................................................CGAAAAGAAGAAGC---AGGAC.............................................................................................................................................................1911.0010100
............................................................................................................................................CAATGAAATCTACGAACAGCT..................................................................................................................................................................................................2111.0010100
............................................................................................................................................................................................................................................................................................................AACAGTGGCGTTTACTACGG...................................2011.0010100
...................................................................................................................................................................................................................................CACTGTGTTCGATCTCCTG.............................................................................................................1911.0010010
...................................................................................................................................................................................................................................................................................................................GCGTTTACTACGGCCTGTCGTT..........................2211.0011000
.....................................................................................................................................................CTACGAACAGCTGGTGGACGAGGTGGCC..................................................................................................................................................................................2811.0010100
.......................................................................................................................................................................CGAGGTGGCCGAAAAGAAGAAGC---T.................................................................................................................................................................2411.0010100
.................................................................................................................................................................................................................................................................................................ATTGGTTTGTGAACAGTGGCGT............................................2211.0010100
.......................................................................GAAGGGTCGCAAGGATGA..........................................................................................................................................................................................................................................................................1811.0011000
.......................................................................................................................................................ACGAACAGCTGGTGGACGA.........................................................................................................................................................................................1911.0011000
........................................................................AAGGGTCGCAAGGATGAGGCCT.....................................................................................................................................................................................................................................................................2211.0010100
....................................................................................................................................................................................................................................................................................................GGTTTGTGAACAGTGGCGTTTA.........................................2211.0010100
.....................................................................................................................................................................................................................................................................................................................................CGTGGAACACCAACAATCTG..........2011.0011000
.....CTTGCCGGGACTGCTCTTCCT.........................................................................................................................................................................................................................................................................................................................................2111.0010100
...............................................................................................................................................................................................................................................................................................CGATTGGTTTGTGAACAGTGGC..............................................2211.0010100
.....................................................................................................................................................................................................................................CTGTGTTCGATCTCCTGCGCTT........................................................................................................2211.0011000
................................CTATTGGATCATTCCGGAGTCTGCCC.........................................................................................................................................................................................................................................................................................................2611.0010100
..............................................................................................................................................................GCTGGTGGACGAGGTGGC...................................................................................................................................................................................1811.0010001
.......................................................................................................................................................................................................................................................................................................................TTACTACGGCCTGTCGTGGAA.......................2111.0010010
dm3
ATAACCTTGCCGGGACTGCTCTTCCTTTGCTACTACTGGATCATTCCGGAGTCTGCCCGTTGGCTCTTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACAAGGTGGAGGTGCCCAATGAAATCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGATGGCCGCCTCCCAA---CCAGCGGCCACTGTGTTCGATCTCCTGCGCTATCCGAATCTTCGACGGAAAACCCTGCTCATCTTCTTCGATTGGTTTGTGAACAGTGGCGTTTACTACGGCCTGTCGTGGAACACCAACAATCTGGGTGGAAACCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................CCTTTGCTACTACTGGATC.........................................................................................................................................................................................................................................................................................................................19112.00120000000000000000000000000000000000000000000000000000000006420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTGATGAAGGGTCGCAAGGATGAGGCC......................................................................................................................................................................................................................................................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001700000
.....................................................................................................................................................................GACGAGGTGGCCGAAAC.............................................................................................................................................................................1726.50130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TTCGATTGGTTTGTGAACAGTGGCGTT...........................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000500000
.....................................................................................................................................................................GACGAGGTGGCCGAAAAG............................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000
.................................................................................................TGATCATCGAGAAGGCGGCCA.............................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TTTGTGATCATCGAGAAGGCG.................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000000
...............................................................................................TGTGATCATCGAGAAGGCGGC...............................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................TGATGAAGGGTCGCAAGGATGAGGC.......................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000
.........................................................................................................................................................................................................................................GTTCGATCTCCTGCGCTATCC.....................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................AAGGGTCGCAAGGATGAGGCC......................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
......................................................................................................................................................................................................................................................................................................................TTTACTACGGCCTGTCGTGGA........................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAACCTTGCCGGGACTGCTCTTCCTT........................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................TGATCATCGAGAAGGCGGC...............................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000
ATAACCTTGCCGGGACTGCTC..............................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000
........................................................................AAGGGTCGCAAGGATGAGGC.......................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000030000000
...................................................................................................................................................................................................................................................................TTCGACGGAAAACCCTGCTCA...........................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110001000000
...........................................................................................................................................................................................................................................................................................................GAACAGTGGCGTTTACTACGG...................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................GCCGAAAAGAAGAAGC---AGGAC.............................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................GACGAGGTGGCCGAAAAA............................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000
........................................................................................AGGCCTTTGTGATCATCGAGA......................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GTGATCATCGAGAAGGCGGCC..............................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............................................................................................TTGTGATCATCGAGAAGGCGGATC.............................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TCTTCTTCGATTGGTTTGTGA......................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................TACTACGGCCTGTCGTGGAACACCAACAA..............2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AGCAGCTGGTGGACGAGGT......................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................TTGATGAAGGGTCGCAAGGATGAGGC.......................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................AACAGTGGCGTTTACTACG....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................................................................................................TCGATTGGTTTGTGAACAGTGGCGTTA..........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................CCAATGAAATCTACGAGCAGC...................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TATCCGAATCTTCGACGGAAAACCCTGC..............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CGAGATGGCCGCCTCCCAA---CC......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................GCGGCCAAGGAGAACAAGGTGGAG............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................................................................................................................................................................................................TTCGATCTCCTGCGCTATCCG....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
droEre2
CTGACCTTGCCGGGATTGCTCTTCCTGTGCTACTACTGGATCATTCCGGAGTCGGCGCGTTGGCTCCTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACAAGGTGGAGGTGCCCAACGAAGTCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAAAAGAAGC---AGGACGAGATGGCCGCATCCCAA---CCAGCGGCCACCGTGTTCGATCTCCTGCGCTATCCCAATCTTCGCCGGAAAACCCTGCTGATCTTCTTCGACTGGTTTGTGAACAGTGGCGTGTACTACGGCCTGTCGTGGAACACCAACAACCTCGGTGGAAACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................GGAAAACCCTGCTGATCTTCTTCGACT...............................................................2712.0020002000
..........................................................GTTGGCTCCTGATGAAGGGTCGCAAGG..............................................................................................................................................................................................................................................................................2712.0022000000
....................................................................GATGAAGGGTCGCAAGGATGAGGC.......................................................................................................................................................................................................................................................................2411.0010000100
.........................................................................................................................................................................................GAAGC---AGGACGAGATGGC.....................................................................................................................................................1811.0010010000
..........................................................................................................................................CCCAACGAAGTCTACGAGCAGCTGGTGG.............................................................................................................................................................................................2811.0011000000
....................CTTCCTGTGCTACTACTGG............................................................................................................................................................................................................................................................................................................................1911.0010000100
...................................................................................................................................................................................AAAAAAGAAGC---AGGACGAGATGGCC....................................................................................................................................................2511.0010000010
..................................................................................AGGATGAGGCCTTTGTGATC.............................................................................................................................................................................................................................................................2011.0010100000
.............................................................................TCGCAAGGATGAGGCCTTT...................................................................................................................................................................................................................................................................1911.0011000000
..............................................................................CGCAAGGATGAGGCCTTTGT.................................................................................................................................................................................................................................................................2011.0010000010
.....................................................................................................................................................................................................CGAGATGGCCGCATCCCAA---CCAGCGGC................................................................................................................................2711.0010100000
..............................................................................................TTGTGATCATCGAGAAGGC..................................................................................................................................................................................................................................................1911.0010001000
.....................................................................................................................................................CTACGAGCAGCTGGTGGACGAGGT......................................................................................................................................................................................2411.0010000010
...................................................................................................................................................................................................................................CACCGTGTTCGATCTCCTGC............................................................................................................2011.0010100000
..GACCTTGCCGGGATTGCTCTTCCT.........................................................................................................................................................................................................................................................................................................................................2411.0010000100
.......................................................................................................................................................................CGAGGTGGCCGAAAAAAAGAAGC---A.................................................................................................................................................................2411.0010001000
....................................................................................................................................................................................................................................................................................................GGTTTGTGAACAGTGGCGTGT..........................................2111.0010000100
.....................................................................................................................................................................................AAAAGAAGC---AGGACGAGATGGC.....................................................................................................................................................2211.0010000010
............................................................................................................AAGGCGGCCAAGGAGAACA....................................................................................................................................................................................................................................1911.0010000100
................................................................................................................................................................................................................................................................................CCTGCTGATCTTCTTCGACTG..............................................................2111.0010001000
................................................................TCCTGATGAAGGGTCGCAAGGATG...........................................................................................................................................................................................................................................................................2411.0010001000
.........................................................................................................................................................................................GAAGC---AGGACGAGATGGCCGC..................................................................................................................................................2111.0010100000
...................................................................................................................................................................................AAAAAAGAAGC---AGGACGAGATGGC.....................................................................................................................................................2411.0010100000
...........................................................................................................................................................GCAGCTGGTGGACGAGGT......................................................................................................................................................................................1811.0010000100
.......................................................................................................................................................................................AAGAAGC---AGGACGAGATGGC.....................................................................................................................................................2011.0010000100
.....................................................................................................CATCGAGAAGGCGGCCAAGGAGAAC.....................................................................................................................................................................................................................................2511.0010100000
.........................................................................................................................................GCCCAACGAAGTCTACGAGC......................................................................................................................................................................................................2011.0010001000
.....................................................................................................................................................................................................................................................................................................GTTTGTGAACAGTGGCGT............................................1811.0010001000
.....................................................................................................................................................................GACGAGGTGGCCGAAACT............................................................................................................................................................................18110.0911000000
droYak3
CTGACCTTGCCGGGATTGCTCTTCCTCTGCTACTACTGGATCATTCCGGAGTCGGCCCGTTGGCTGCTGATGAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACAAGGTGCAGGTGCCCAATGAAATCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGATGGCCGCCTCCCAG---CCGGCGGCCACCGTGTTCGATCTGCTCCGCTATCCCAATCTGCGCCGGAAAACGCTGCTGATCTTCTTCGATTGGTTTGTGAACAGTGGCGTGTACTATGGACTCTCGTGGAACACGAACAACCTGGGCGGCAACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................CGAGAAGGCGGCCAAGGA.........................................................................................................................................................................................................................................1812.00201000010000
.......................................................................................................................................................................................................................................................................................................TTGTGAACAGTGGCGTGTACT.......................................2112.00200000020000
...............................................................................................................................................................................CCGAAAAGAAGAAGC---AGGACGAGAC........................................................................................................................................................2511.00100100000000
......................................................................................................................................................................................................................................................................................GATCTTCTTCGATTGGTTTGT........................................................2111.00100000010000
............................................................................................................................................................................................................................................................................................CTTCGATTGGTTTGTGAACAGTGGCGT............................................2711.00100000010000
.....................................................................................................................AAGGAGAACAAGGTGCAGGTG.........................................................................................................................................................................................................................2111.00100000010000
........................................................................AAGGGTCGCAAGGATGAGG........................................................................................................................................................................................................................................................................1911.00100000010000
....................................................................................................................................................................................................................................ACCGTGTTCGATCTGCTCCGC..........................................................................................................2111.00101000000000
..............................................................................................TTGTGATCATCGAGAAGGC..................................................................................................................................................................................................................................................1911.00101000000000
...................................................................................................................................................................................................................................................................................................TGGTTTGTGAACAGTGGCGT............................................2011.00100000010000
....................................................................GATGAAGGGTCGCAAGGATGAGGC.......................................................................................................................................................................................................................................................................2411.00100000010000
.................................................................................................................................................................................GAAAAGAAGAAGC---AGGAC.............................................................................................................................................................1811.00100100000000
....................................................................................................................................................................................AAGAAGAAGC---AGGACGAGATG.......................................................................................................................................................2111.00101000000000
........................................................................................................................................................................................................................................................................................................TGTGAACAGTGGCGTGTACTAT.....................................2211.00100000010000
..............................................................................................................................................ATGAAATCTACGAGCAGCTGG................................................................................................................................................................................................2111.00100000010000
.TGACCTTGCCGGGATTGCTCTTCCTC........................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.......................................................................................................................................................................................AAGAAGC---AGGACGAGATGG......................................................................................................................................................1911.00100000010000
................................................................................................................................................................................................................................................................ATCTGCGCCGGAAAACGCTGCTGAT..........................................................................2511.00100000010000
.............................................................................................................................................................................................................................................................................................................................................ACGAACAACCTGGGCGGCA...1911.00101000000000
............................................................................................................................................................................................................................................................................................................................ATGGACTCTCGTGGAACACGA..................2111.00101000000000
...........................................................................................................................................................................................................................................................................AAAACGCTGCTGATCTTCTTC...................................................................2111.00101000000000
...............TTGCTCTTCCTCTGCTACTAC...............................................................................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................CTGATGAAGGGTCGCAAGGA.............................................................................................................................................................................................................................................................................2011.00100000010000
.................................................................................AAGGATGAGGCCTTTGTGATC.............................................................................................................................................................................................................................................................2111.00100100000000
....................................................................................GATGAGGCCTTTGTGATCA............................................................................................................................................................................................................................................................1911.00101000000000
.........................................................................................................................................GCCCAATGAAATCTACGAGC......................................................................................................................................................................................................2011.00100000010000
..........CGGGATTGCTCTTCCTCTGCTTT..................................................................................................................................................................................................................................................................................................................................2311.00101000000000
................................................................................................GTGATCATCGAGAAGGCGGCCAAGGAG........................................................................................................................................................................................................................................2711.00100000010000
....................................................................GATGAAGGGTCGCAAGGATG...........................................................................................................................................................................................................................................................................2011.00100000010000
................................CTACTGGATCATTCCGGAGTC..............................................................................................................................................................................................................................................................................................................2111.00101000000000
.........CCGGGATTGCTCTTCCTCTGC.....................................................................................................................................................................................................................................................................................................................................2111.00101000000000
................................................................................................................................................................................CGAAAAGAAGAAGC---AGGAC.............................................................................................................................................................1911.00101000000000
................................................................................................................................................................................................................................................................................................GATTGGTTTGTGAACAGTGGCGT............................................2311.00100000010000
.................................................................................................................................................................................................................................................................................................................TGGCGTGTACTATGGACTCTC.............................2120.50101000000000
droEug1
CTGACTTTGCCTGGACTCCTATTCATTTGCTACTACTGGATCATTCCGGAGTCTGCCCGTTGGCTTTTGATGAAGGGTCGCCAAGAGGAGGCCTTTGTGATTATCAAAAAGGCAGCCAAGGAAAACCGGGTTGAAATACCCAGTGAAATCTATGAGCAGCTTGTGGAAGAGGTGGCCGAAAAGAAGAAGC---TGGACGAGCAGACGGCCTCTCAG---CCAGCGGCTACCGTATTTGATCTCCTTCGTTACCCAAATCTTCGCCGGAAAACCTTGCTGATTTTCTTCGATTGGTTTGTAAACAGTGGTGTTTACTATGGCCTCTCCTGGAACACGAACAATTTGGGTGGAAATCSizeHit CountTotal NormTotal
No Reads
droBia1
CTTACCTTGCCGGGACTCCTCTTCATTTGCTACTACTGGATCATTCCGGAGTCTGCCCGCTGGCTTCTGCTCAAGGGGCGCCAGGAGCAGGCCTTTGTGATCATCAAGAAGGCGGCCAAGGAGAACCGAGTGCAGATTCCCAATGAGATCTACGATCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAAC---AAGATGAGCTGACAGCCAATCAG---CCGGCGGCCACCGTCTTCGATCTCCTCCGGTTTCCCAATCTCCGCCGGAAGACCCTCCTCATTTTCTTCGATTGGTTTGTGAACAGTGGTGTCTACTATGGCCTCTCGTGGAACACGAACAACCTGGGTGGCAACCSizeHit CountTotal NormTotal
No Reads
droTak1
TTGACCCTCCCGGGACTCCTCTTCATTTGCTACTATTGGATCATTCCGGAGTCTGCCCGCTGGCTTTTGCTCAAGGGTCGCCAGGAGGAGGCCTTTGTGATCATCAAAAAGGCGGCCAAGGAGAACCGGGTTCAAATACCCAGTGAAATCTACGAGCAGCTGGTGGATGAGGTGGCGGAAAA-AAGAAAC---AAGATGAACTGACGGCCTCCCTG---CCAGCGGCTACTGTGTTTGATCTCCTAAGATATCCCAATCTCCGCAGGAAAACCCTCCTCATCTTCTTCGATTGGTTTGTGAATAGTGGTGTTTACTACGGGCTCTCCTGGAACACAAATAACCTGGGTGGCAATCSizeHit CountTotal NormTotal
No Reads
droEle1
CTGACGCTGCCGGGACTGCTCTTCGTTTGCTACTACTGGATCATTCCGGAGTCGGCCCGCTGGCTTTTGCTCAAGGGTCGCAAGGACGAGGCCTTCGTGATCATCGAGAAGGCGGCCAAGGAGAACCGGGTTGAGATTCCCAGCGAGATCTACGAGCAGCTGGTGGACGAGGTGGCCGAGAAGAAGAAAC---AGGACGAACTGACGGCCTCCCAG---CCGGCGGCCACCGTATTTGATCTGCTCCGGTTTCCCAATCTTCGCCGGAAAACCCTGTTGATCTTCTTCGATTGGTTTGTGAACAGCGGCGTGTACTACGGTCTGTCGTGGAACACTAACAACCTGGGCGGCAATCSizeHit CountTotal NormTotal
No Reads
droRho1
CTGACGCTGCCGGGACTCCTCTTCATTTGCTACTACTGGATCATTCCGGAGTCTGCCCGGTGGCTCTTGCTCAAGGGTCGCAAGGATGAGGCCTTTGTGATCATCGAGAAGGCGGCCAAGGAGAACCGGGTGGAGATACCCAATGAGATCTATGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAAC---AGGATGAGCTGACGGCTTCCCAG---CCGGCGGCCACCGTATTCGATCTCCTCCGGTTTCCCAATCTTCGCCGGAAAACCCTGTTGATCTTCTTCGATTGGTTTGTGAACAGTGGCGTGTACTATGGACTGTCCTGGAACACAAACAACCTCGGCGGTAATCSizeHit CountTotal NormTotal
No Reads
droFic1
CTTACTCTACCGGGATTGCTATTCCTTTGCTACTATTGGATCATCCCGGAATCTGCGCGATGGCTTCTGCTGAAGGGTCGCCAGGAGGAGGCCTTCGTTATCATCGAGAAGGCGGCAAAGGAGAACAAGGTGAAGATACCCAACGAGATCTACGATCAGCTGGTGGAGGAGGTGGCCGAAAAGAAGCGAC---AGGATGCCCTGACTGCATCTCAA---CCGGCAGCCACAGTCTTCGATCTCCTGCGATATCCGAATCTCCGGAGGAAAACCCTCTTGATTTTTTTCGATTGGTTTGTGAACAGTGGTGTGTACTATGGACTCTCGTGGAACACCAACAATCTCGGTGGCAATCSizeHit CountTotal NormTotal
No Reads
droKik1
CTGACTTTGCCAGGGCTCCTCTTCATCTGCTACTACTGGATCATTCCGGAGTCTGCCCGCTGGCTGCTACTAAAGGGTCGCAAAGATGAGGCATTCGTGATCATCAAAAAGGCAGCCAAGGAGAACCGGGTCGAGATACCCAGCGAGATCTATGAGCAGCTGGTGGACGAGGTGGCCGAGAAGAAGAAAC---AAGATGAACTGACAGCTTCCCAA---CCGGCGGCAACGGTGTTTGATCTCCTCCGATACCCCAATCTTCGCCGGAAGACCCTGCTGATCTTCTTCGATTGGTTCGTAAACAGCGGCGTCTACTACGGCCTCTCGTGGAACACCAACAACCTGGGGGGAAACCSizeHit CountTotal NormTotal
No Reads
droAna3
CTGACCCTACCGGGTCTTCTCTTCATCTGCTATTACTGGATAGTCCCTGAATCGGCTCGCTGGCTCTTGCTGAAAGGCCGAAAGGACGAGGCCTTTGTGATAATCGATAAGGCAGCCAAGGAGAATCGAGTGGAGATACCAAACGCGATCTACGAGCAGCTGGTGGACGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGCTCACAGCCTCTCAG---CCGGCAGCCACAGTGTTTGATCTCCTCCGTTACCCGAATCTACGCCGGAAGACTCTTCTCATCTTTTTCGACTGGTTTGTGAACAGTGGTGTTTACTACGGACTGTCCTGGAACACAAACAACCTGGGTGGCAATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................ACCAAACGCGATCTACGAGCAGC...................................................................................................................................................................................................2312.002010100
..............................................................................................................................CGAGTGGAGATACCAAACGC.................................................................................................................................................................................................................2011.001100000
........................................................................................................................................................................GAGGTGGCCGAAAAGAAGAAGC---..................................................................................................................................................................2211.001010000
....................................................................................................................................GAGATACCAAACGCGATCTACGAGC......................................................................................................................................................................................................2511.001000010
.......................................................................................................................................................................................................................................................................................................................TTACTACGGACTGTCCTGGAACAC....................2411.001010000
.................................................................................AAGGACGAGGCCTTTGTGAT..............................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................ACACAAACAACCTGGGTGG.....1911.001100000
...................................................TCGGCTCGCTGGCTCTTGCTG...........................................................................................................................................................................................................................................................................................2111.001000001
....................................................................................................................CAAGGAGAATCGAGTGGAGA...........................................................................................................................................................................................................................2011.001000010
...........................................................................................................................................................GCAGCTGGTGGACGAGGTGGCC..................................................................................................................................................................................2211.001010000
.................................................................................................................................................................GGTGGACGAGGTGGCCGAAAAGAAGAA.......................................................................................................................................................................2711.001000010
.....................................................................................................................................................................................................................................................................................................GTTTGTGAACAGTGGTGT............................................1811.001000001
..............................................................................................................GGCAGCCAAGGAGAATCGAGTGGAG............................................................................................................................................................................................................................2511.001000010
................................................................................................................................................................................................................................AGCCACAGTGTTTGATCTCC...............................................................................................................2011.001010000
droBip1
CTCACCCTTCCGGGACTTCTCTTCCTCTGCTACTATTGGATTGTGCCGGAATCGGCTCGCTGGCTCTTGCTCAAAGGCCGCAAGGACGAGGCCTTTGTTATAATCGAAAAGGCAGCCAAGGAGAATCGAGTGGAGATACCCAACGAGATCTACGAGCAGCTGGTCGAAGAGGTGGCCGAAAAGAAGAAGC---AGGACGAGCTGACAGCCTCCCAG---CCGGCAGCCACCGTGTTCGATCTCCTGCGGTACCCGAATCTGCGCCGGAAAACCCTGCTCATCTTCTTCGATTGGTTTGTGAACAGCGGTGTCTACTACGGACTCTCCTGGAACACCAACAATCTGGGTGGCAACCSizeHit CountTotal NormTotal
No Reads
dp5
CTGACTCTGCCGGGACTCCTCTTCGTCTGCTACTACTGGATCATACCGGAGTCCGCACGCTGGCTGCTGCTCAAGGGGCGCAAGGAAGAGGCCTTCGTGATCATTGAGAAGGCTGCCAAGGAGAACAGGGTGGAGATTCCCAGCGAGATCTACGAGCAGCTAGTGGAGGAGGTGGCCGAAAAGAAGAAAC---AGGACGAGCTGACGGCCTCCCAG---CCGGCGGCCACAGTCTTCGACCTCCTGCGGCATCCGAATCTGCGGCGCAAGACGCTGCTCATCTTCTTCGATTGGTTCGTCAACAGCGGCGTCTACTATGGGCTGTCGTGGAACACCAACAACCTGGGGGGCAACCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................AGCTGACGGCCTCCCAG---CCGGC...................................................................................................................................2212.0020000000002
............................................................................................................................................................................................................................................................................................CTTCGATTGGTTCGTCAACAGCGGCGT............................................2711.0010000000001
................................................................................................................................................................................................................................................................................................GATTGGTTCGTCAACAGCGGCGTCTAC........................................2711.0010000001000
.....................................................................................................CATTGAGAAGGCTGCCAAGGA.........................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................ATCCGAATCTGCGGCGCAAGACG..................................................................................2311.0010010000000
...........................TGCTACTACTGGATCATACC....................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................CTACGAGCAGCTAGTGGAGGA.........................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................GGCGTCTACTATGGGCTGTC.............................2011.0010100000000
..........................................................................................................................................................................................................................................................ATCCGAATCTGCGGCGCAAGACGCT................................................................................2511.0010000100000
................................................................................................................................................................................................................................................................................................................GCGGCGTCTACTATGGGCT................................1911.0010100000000
..............................................................................................................GGCTGCCAAGGAGAACAGGGTG...............................................................................................................................................................................................................................2211.0010100000000
.................CCTCTTCGTCTGCTACTACTGGAT..........................................................................................................................................................................................................................................................................................................................2411.0010100000000
.............................CTACTACTGGATCATACCGGAGT...............................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................................................................................................................GGAGATTCCCAGCGAGATCTA...........................................................................................................................................................................................................2111.0010010000000
.........................................................................AGGGGCGCAAGGAAGAGGCCT.....................................................................................................................................................................................................................................................................2111.0010000001000
.....................................................................................................................................................................................................................................................GCGGCATCCGAATCTGCGGCGCA.......................................................................................2311.0010100000000
droPer2
CTCACGCTCCCAGGACTCCTCTTCGTCTGCTACTACTGGATCATACCGGAGTCCGCCCGCTGGCTGCTGCTCAAGGGGCGCAAGGAAGAGGCCTTCGTGATCATTGAGAAGGCTGCCAAGGAGAACAGGGTGGAGATTCCCAGCGAGATCTACGAGCAGCTGGTGGAGGAGGTGGCCGAAAAGAAGAAAC---AGGACGAGCTGACGGCCTCCCAG---CCGGCGGCCACAGTCTTCGACCTTTTGCGGCATCCGAATCTGCGTCGCAAGACGCTGCTCATCTTCTTCGATTGGTTCGTCAACAGCGGCGTCTACTATGGGCTATCGTGGAACACCAACAACCTGGGGGGCAACCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................GGCCGAAAAGAAGAAAC---AGGACG............................................................................................................................................................2312.002200000
.................................................................................................................................................................................................................................................................................................................CGGCGTCTACTATGGGCT................................1812.002200000
.......................................................................................................................................................................................................................................................................................ATCTTCTTCGATTGGTTCGTC.......................................................2111.001100000
.....................................................................................................................................................CTACGAGCAGCTGGTGGAGGAGGT......................................................................................................................................................................................2411.001001000
.............................................................................................................................................................................................C---AGGACGAGCTGACGGCCTCCC.............................................................................................................................................2211.001100000
..................................................................................................................GCCAAGGAGAACAGGGTGGAGA...........................................................................................................................................................................................................................2211.001000001
......................................................................................................................................................TACGAGCAGCTGGTGGAGGAGGG......................................................................................................................................................................................2311.001001000
................................................................................................................................................................................................................................GGCCACAGTCTTCGACCTTTTGCGGC.........................................................................................................2611.001100000
......................................................................................................................................................................................GAAGAAAC---AGGACGAGCTGAC.....................................................................................................................................................2111.001100000
..........................................................................................................................................................................................AAAC---AGGACGAGCTGACGGC..................................................................................................................................................2011.001000001
droWil2
CTGACTCTTCCAGGATTGGTTTTCCTTTGTTATTATTGGCTTGTGCCCGAGTCGGCACGTTGGCTGCTTAGCAAGGGACGGAAAGAAGAATCGTTTGTGATTATTGAAAAGGCAGCCAAAGTCAATAAAGTAGAAATTCCAAGCCAGATCTACGATCAATTAGTCGAGGAGGTGGCAGAGAAGAAGAAAC---AAGACGAATTGGCCTCGTCTCAG---CCAGCAGCTTCTGTACTGGATCTTTTGCGTTATCCGAATCTTCGCCGCAAAACCCTGCTGATCTTTTTCGATTGGTTTGTCAACAGTGGCGTCTACTATGGTCTCTCGTGGAATACAAACAATCTGGGAGGGAATCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................CTCAG---CCAGCAGCTTCTGTAC........................................................................................................................2112.00200002
................................................................................................................................................................................................................................................................................................................GTGGCGTCTACTATGGTCTCT..............................2112.00200020
.................................................................................................................................................................................................................................................................................................ATTGGTTTGTCAACAGTGGCG.............................................2112.00200020
..............................................................................................................................AAAGTAGAAATTCCAAGCC..................................................................................................................................................................................................................1912.00220000
..............................................................................................................................................................ATTAGTCGAGGAGGTGGCAGAGA..............................................................................................................................................................................2311.00100010
.....................................................................................................................................................................................AGAAGAAAC---AAGACGAATTGGCCTCGT................................................................................................................................................2711.00100100
................................................................................................................................................................................................................CGTCTCAG---CCAGCAGCTTCTGTACT.......................................................................................................................2511.00100010
.......................................................................................................................................................................................................................................................................................................TTGTCAACAGTGGCGTCTACTATGGT..................................2611.00100010
.............................................................................................................................................................................................................................................................................................TTCGATTGGTTTGTCAACAGTGGCGT............................................2611.00100100
........................................................................................................................................................................GAGGTGGCAGAGAAGAAGAAAC---..................................................................................................................................................................2211.00100100
.........................................................CGTTGGCTGCTTAGCAAGGGACGGA.................................................................................................................................................................................................................................................................................2511.00100100
....................................................................................................................CAAAGTCAATAAAGTAGAAATTCCAAGCC..................................................................................................................................................................................................................2911.00110000
........................................................................AAGGGACGGAAAGAAGAAT........................................................................................................................................................................................................................................................................1911.00100100
.........................................................................................................................................................................................................................................................................................CTTTTTCGATTGGTTTGTC.......................................................1911.00100010
..............................................................GCTGCTTAGCAAGGGACGGAAAGAAGAAT........................................................................................................................................................................................................................................................................2911.00100100
............................................................................................................................................................................................................................................................................................................AACAGTGGCGTCTACTATGGTC.................................2211.00100100
...............................................CGAGTCGGCACGTTGGCTGCT...............................................................................................................................................................................................................................................................................................2111.00100100
.........................................................................................................................................................................................................................................ACTGGATCTTTTGCGTTATCC.....................................................................................................2111.00100010
..................................................................................................................................................................................................................................................................CTTCGCCGCAAAACCCTGCT.............................................................................2011.00100010
............................................GCCCGAGTCGGCACGTTGGCT..................................................................................................................................................................................................................................................................................................2111.00100010
..............................................................................................................................................................ATTAGTCGAGGAGGTGGCA..................................................................................................................................................................................1911.00100010
..............................................................................................TTGTGATTATTGAAAAGGCAGCCAAAG..........................................................................................................................................................................................................................................2711.00100010
..................................................................................................................................................................................................................................................................CTTCGCCGCAAAACCCTGCTG............................................................................2111.00101000
..............................................................................................................................................................ATTAGTCGAGGAGGTGGCAGA................................................................................................................................................................................2111.00100010
..............................................................................................................................................................................................................................................................GAATCTTCGCCGCAAAACCCTGCT.............................................................................2411.00100010
...........................................................................................................................................................................................................................................................................................................................................ATACAAACAATCTGGGAGGG....2011.00100100
.................................................................................AAAGAAGAATCGTTTGTGATT.............................................................................................................................................................................................................................................................2111.00100001
.............................TTATTATTGGCTTGTGCCCGAGTCGGCA..........................................................................................................................................................................................................................................................................................................2811.00100010
............................................................................................................................................................................................AC---AAGACGAATTGGCCTCGT................................................................................................................................................2011.00100010
................................................................................................................................................................................................................................................................................................................................................AACAATCTGGGAGGGAATC1911.00100001
............................................................................................................................................................................................................................................................................................................AACAGTGGCGTCTACTATGGT..................................2111.00100010
............................................GCCCGAGTCGGCACGTTGGCTGCTTAGC...........................................................................................................................................................................................................................................................................................2811.00100001
...............................................................................................................................................................TTAGTCGAGGAGGTGGCAGAGAAGA...........................................................................................................................................................................2511.00100010
..........................................................GTTGGCTGCTTAGCAAGG.......................................................................................................................................................................................................................................................................................1811.00100010
.........................................................................................................................................................................................................................................................................................................GTCAACAGTGGCGTCTACTATG....................................2211.00100100
....................................................................................................................................................................CGAGGAGGTGGCAGAGAAGAAGA........................................................................................................................................................................2311.00100100
......................................................................................................................................................................................................GAATTGGCCTCGTCTCAG---CCAGCAGCTT..............................................................................................................................2811.00100100
..............................................CCGAGTCGGCACGTTGGCT..................................................................................................................................................................................................................................................................................................1911.00100100
...............................ATTATTGGCTTGTGCCCGAGTCGGCA..........................................................................................................................................................................................................................................................................................................2611.00100010
...........................................................................................CGTTTGTGATTATTGAAAAGGC..................................................................................................................................................................................................................................................2211.00100010
.........................................................................................................................................................................................GAAAC---AAGACGAATTGGCCT...................................................................................................................................................2011.00100010
droVir3
CTGACGCTGCCCGGTCTGCTGTTCATGTGCTACTATTGGATCGTGCCCGAGTCTGCGCGCTGGCTGCTCTCCAAGGGACGCAAGGAGGAGGCCTTTGTGATCATTGAGAAGGCGGCCAAGGTCAACCGCGTGCAGATACCCAGCGAAATCTACGAACAGCTTGTCGAGGAGGCAGCCGAAAAGAAGCGCA---AGGATGAGCTAGCCGCCGCAGAG---CCCTCGGCATCCGTGTTCGATCTGCTGCGCTATCCGAATCTGCGCCGAAAAACGCTGCTCATCTTTTTCGACTGGTTCGTCAATAGCGGCGTCTACTATGGTCTCTCGTGGAATACGAACAACCTGGGCGGCAATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................GACGCAAGGAGGAGGCCTTTGT.................................................................................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................GCCGAAAAGAAGCGCA---AGGATGA...........................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
......................................GATCGTGCCCGAGTCTGCGCG........................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................ATCATTGAGAAGGCGGCCAAG...........................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CATCTTTTTCGACTGGTTCGT........................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ATACGAACAACCTGGGCGGCAATC2411.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GAG---CCCTCGGCATCCGTGTTCGATC..................................................................................................................2511.001000000000000000000010000000000000000000000000000000000000000000
......................................................................................................ATTGAGAAGGCGGCCAAG...........................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CGTGGAATACGAACAACCTGGGC.......2311.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................ATCTACGAACAGCTTGTCGAGGAGGC......................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GCA---AGGATGAGCTAGCCGCCGC...............................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................GGCATCCGTGTTCGATCTGCTGC............................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AGCGCA---AGGATGAGCTAGC.....................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................TACCCAGCGAAATCTACGAACAGCT..................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CTCGTGGAATACGAACAACCTGGGCGGC....2811.001000000000000000000000000000000000000000000100000000000000000000
................................................................................................GTGATCATTGAGAAGGCGGCC..............................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................A---AGGATGAGCTAGCCGCCGT...............................................................................................................................................2011.001000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ATCCGAATCTGCGCCGAA.......................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
...........CGGTCTGCTGTTCATGTGCTA...................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000000000000000000000000000000000001000
.TGACGCTGCCCGGTCTGCTGTTCATGT.......................................................................................................................................................................................................................................................................................................................................2720.501000100000000000000000000000000000000000000000000000000000000000
droMoj3
ATCACGCTGCCCGGCCTGCTCTTCATGTGCTACTACTGGATTGTGCCGGAGTCGGCGCGCTGGCTGCTGTCCAAGGGACGCAAGGACGAGGCCTTCGTGATCATCGAGAAGGCGGCCCGGGTCAATGGCGTGGAAATACCCAGCCAGATCTATGCCCAGCTAGTCGATGAGG---CCGAAGAGATTAATCGTAAGAATGCCTTGGCCGCCGCCCAA---CCAGCAGCCTCCGTGTTCGATCTGCTGCGGTATCCCAACTTGCGGCGCAAGACGCTGCTCATCTTCTTCGACTGGTTCGTGAACAGCGGCGTCTACTACGGCCTCTCGTGGAACACGAACAACCTGGGCGGCAATCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................GATCTGCTGCGGTATCCCAACTTGC.............................................................................................2511.001100000
..............................................................................................................................................................................................................................................................................................................................GGCCTCTCGTGGAACACG...................1811.001100000
.....................................................................................................CATCGAGAAGGCGGCCCGGGT.........................................................................................................................................................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................TACGGCCTCTCGTGGAACA.....................1911.001100000
.............................................................................................TTCGTGATCATCGAGAAGGC..................................................................................................................................................................................................................................................2011.001000001
.....................TTCATGTGCTACTACTGGAT..........................................................................................................................................................................................................................................................................................................................2011.001100000
.................................................................................................................................................................................................................................GCCTCCGTGTTCGATCTGCTGC............................................................................................................2211.001000010
.............................................................................................................................................AGCCAGATCTATGCCCAGCTAGTCG.............................................................................................................................................................................................2511.001000001
........................................................................................................CGAGAAGGCGGCCCGGGTC........................................................................................................................................................................................................................................1911.001100000
...............................................GGAGTCGGCGCGCTGGCTGCT...............................................................................................................................................................................................................................................................................................2111.001100000
droGri2
CTGACTTTGCCGGGTCTGGTTTTTATGGGCTACTATTGGCTAATACCCGAATCGGCACGTTGGCTGCTCTCGAAGGGTCGCAGCGAGGAGGCGTTTGTCATCATTGAGCGGGCGGCCCGTGTCAATCGTGTCCAGATACCCAGCGAGATCTACGACCAGCTTGTCCGCGAGGAGTCGGCACAGAAGGAGC---AGGCGCAG---ACTGCCTCGCAGCAACCATCCGCATCCGTTTGGGACTTGCTGCGTTATCCGAACTTGCGGCGCAAAACGTTGATCATCTTTTTCGATTGGTTCGTCAACAGTGGCGTCTACTACGGCCTCTCCTGGAACACCAATAATCTGGGTGGCAATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................GTTCGTCAACAGTGGCGTCTACTACG....................................2611.00110
.......................................................................GAAGGGTCGCAGCGAGGAGGC.......................................................................................................................................................................................................................................................................2111.00101
....................................................................................................................................................................................................................................TCCGTTTGGGACTTGCTGCGTT.........................................................................................................2211.00110
..........................................................................................................AGCGGGCGGCCCGTGTCAAT.....................................................................................................................................................................................................................................2011.00110
....................................................................................................................................................................................................................................................................GCGGCGCAAAACGTTGATCATCT........................................................................2311.00110
.................................................AATCGGCACGTTGGCTGCT...............................................................................................................................................................................................................................................................................................1911.00110
........................................................................................................................................................CGACCAGCTTGTCCGCGAGGA......................................................................................................................................................................................2111.00110
.......................................................................GAAGGGTCGCAGCGAGGAGGCG......................................................................................................................................................................................................................................................................2211.00101
....................................................................................................TCATTGAGCGGGCGGCCCGTGTCA.......................................................................................................................................................................................................................................2411.00101
.......................................................................GAAGGGTCGCAGCGAGGAGGCGTTT...................................................................................................................................................................................................................................................................2511.00101
..........................................................................................................AGCGGGCGGCCCGTGTCAATCGTGTCC..............................................................................................................................................................................................................................2711.00110
............................................................................................................................................................................................................................................................................................................................ACGGCCTCTCCTGGAACACCAATAATCT...........2811.00110
...............................................................................GCAGCGAGGAGGCGTTTGTCA...............................................................................................................................................................................................................................................................2111.00110
...............................................................................................................................GTGTCCAGATACCCAGCGA.................................................................................................................................................................................................................1911.00110
........................................................................................................................................................................................AGGAGC---AGGCGCAG---ACTGC..................................................................................................................................................1911.00110
.......................................................................................................TTGAGCGGGCGGCCCGTGTCA.......................................................................................................................................................................................................................................2111.00101
.....................................................................................................................................AGATACCCAGCGAGATCT............................................................................................................................................................................................................1811.00110
...............................................................................................................................................................................................................................................................AACTTGCGGCGCAAAACGTTGATCATC.........................................................................2711.00110
.......................................................................................................................................................ACGACCAGCTTGTCCGCGAGGAGTCGGC................................................................................................................................................................................2811.00101
............................................................................................................................................................................................................................................................CCGAACTTGCGGCGCAAAACGTTG...............................................................................2411.00110
.................................................................................................................................................................................................................................................................................................ATTGGTTCGTCAACAGTGGCGTC...........................................2311.00101

Generated: 05/18/2015 at 11:18 PM