dsi_15857

CGAAGCCCATCTCAGAGTTTATAATGCCAAATCAAAAAGGTAGAGAAACTCACGTCTGCTTTTATGTAAATTCGTAAAAAATATTTACGTTTTACCGTCGCAATCCAAGTTGCTTATATCTTTTTGCGATACAAGCGAATTATTTCCGCATTAGCATATTTCTAGGTAAACAAATCGATTTTACCTCGTGCGATTTCTAGGTCAACTTCGGTCACCTGCTGCCGCAGTCGTTATTATCTCGGCTCCTGCT ************************************************...............(((((..((((((.....)))))).))))).((((((.......((((((.((((.......)))).)))))).........((....))........(((((((.........)))))))..))))))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	GSM343915 embryo	SRR553487 NRT_0-2 hours eggs	M024 male body
...........................................................................................TTACCGTCGCAATCCAAGTTG..........................................................................................................................................	21	0	1	2.00	2	2	0	0	0
.............................................................................................................................................................................................................CTTCGATCACCTGCTGCCGC.........................	20	1	3	1.00	3	0	3	0	0
................................................................................................................................................................................................ATTTCTAGGTCAACTTCGGTC.....................................	21	0	1	1.00	1	1	0	0	0
.............................................................................................................................................................................ATCGACTTTACCTACTGCGA.........................................................	20	3	8	0.13	1	0	0	1	0
......................................................................................AGGTTTTACAGTCGCAAC..................................................................................................................................................	18	3	20	0.10	2	0	0	0	2

GCTTCGGGTAGAGTCTCAAATATTACGGTTTAGTTTTTCCATCTCTTTGAGTGCAGACGAAAATACATTTAAGCATTTTTTATAAATGCAAAATGGCAGCGTTAGGTTCAACGAATATAGAAAAACGCTATGTTCGCTTAATAAAGGCGTAATCGTATAAAGATCCATTTGTTTAGCTAAAATGGAGCACGCTAAAGATCCAGTTGAAGCCAGTGGACGACGGCGTCAGCAATAATAGAGCCGAGGACGA ************************************************...............(((((..((((((.....)))))).))))).((((((.......((((((.((((.......)))).)))))).........((....))........(((((((.........)))))))..))))))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553488 RT_0-2 hours eggs	M023 head	GSM343915 embryo	SRR618934 dsim w501 ovaries	SRR553485 Chicharo_3 day-old ovaries
.......GTAGAGTCTCAAATATTACCGTTTAGTTT......................................................................................................................................................................................................................	29	1	1	1.00	1	1	0	0	0	0
..........................................................................................................................AAACGCTATGTTCGCTTAATAAAGGCGT....................................................................................................	28	0	1	1.00	1	1	0	0	0	0
............................................................................................................................................................................................................TCAAGCCAGTGGACAACG............................	18	2	5	0.20	1	0	0	1	0	0
......................................................................................TGAAAACTGGCAGCGTTA..................................................................................................................................................	18	2	6	0.17	1	0	1	0	0	0
.............................................................................................................................................................................................................................GGCGTCAGCTATACTTGAG..........	19	3	8	0.13	1	1	0	0	0	0
.......................................................................................................................................................................................GAAGCACGCTGAATATCCA................................................	19	3	12	0.08	1	0	0	0	0	1
............................................................................................ATGGCAGCGTTTGGT...............................................................................................................................................	15	1	13	0.08	1	0	0	0	1	0
..........................................................................................................................................................................................................................................ATAGTGCCGATGACGA	16	2	20	0.05	1	0	0	0	1	0
.........................................................................................................................................................................................AGCAAGTTTAAGATCCAGT..............................................	19	3	20	0.05	1	0	1	0	0	0

Species	Coordinate	ID	Alignment
droSim2	2r:4709886-4710135 -	dsi_15857	CGAAGCCCATCTCAGAGTTTATAATG---CCAAATCAAAAAGGTAGAGAA----------------ACTCACGTCTGCTTTTATGTAAATTCGTAA-AAAATATTTACGT-TTTACCGTCGCAATCCAAGTTGCTTATAT-CTTTTTGCGATA-----------------------------------------------CAAGCGAATTATTTCCGCATTAGCATATTTCTAGGTAAAC----AAATCGATTTTACCTC-GT-----GCGATTTCTAGGTCAA--------CTTCGG--TCACCTGCTGCCGCAGTCGTTATTATCTCG------GCTCC-TGCT
droSec2	scaffold_1:1523620-1523885 -		CGAAGCGCATCTCAGAGTTTATAATG---GCAAATCAAAAAGGTAGGGAATGGGAATTCGCCCAAAACTCACGTCTGCTTTTATGTAAATTCGTAC-AAAATATTTACGT-TTTACCGTAGCAATCCAAGTTGCTTATAT-CCTTTTGTGATA-----------------------------------------------CAAGCGAATTATTTCCGCATTAGCATATTTCTAGGTAAAC----AAATCGATTTCACCTC-GT-----GCGATTTCTAGGTCAA--------CTTCGG--TCACCTGCTGGCGCAGTCGTTGTTATCTCG------TCTCC-TGCT
dm3	chr2R:3886413-3886699 -		CAAAGCGCATCTAAGAGTTTATAATG---GCAAATCAAAAAGATAAAGAAAAAGA-------TAAAGCTCACGTCTGCTTTTTCGTAAAATTGTAC-AACATATTTACGT-TTTACCGTCGCCATCCAAGTTCCTTATAT-CCCTTTGTGATG-----AAACGCTG--------------------CTTTCGATAACATTAAAGTGAATTATTTCCGCATTAGCATATTTCTAGGTAAAC----AAGTCGATTTTACCTC-GG-----GCAATTTCTAGGTCAA--------CTTCGG--TCACCTGCTGCCGCAGTCGTTGTTATCTCGTCTCCTGCTCC-TGCT
droEre2	scaffold_4929:18741754-18741986 +		GAA-------------------------------TT----------------------GGGTCTGCCCTCACGTCTGCTG--------------------------------TGACCGTGGCAGTTAACTTTACTCATATTCCTATTGTGATTTTCCACAACGATGCTTAAGATATTACATTAAAGCTCTCCAAAACATAAAAGGGTATTATTTGCGC-TTAGCATAGCTGTAGGTAAAC----AAATCGATATTGCCTC-GG-----GCAATTTCTAAATCAA--------CTTCGG--TCACCTGCCGCCGCAGTCGCGGTTATCTCG------GCTCC-TGCT
droYak3	2L:16542767-16543079 -		C-----GCAACTAAAAGTTTAATGGGCTAGAGAGTTTAATAGATAAAGAATTGAAGTACCTCCAAGGATCACGTCTGCTTTTACGTAAGGAATGACAAAAAAATTTGGGTTTTTAACGTCGCAGTTAATTTAACTTATATTCATTTTGCGATTTTCTACAATGATGCTTGGGATTTAACACTAAAGCTCCCAAAAATATAAAAGGGTATTATTTGCGCATAAGCATAGCTCTAGATAAAC----AACTCGAGTTTACCTC-GG-----GCAATTTCTTAGTCAA--------CCTTGG--TCACCTGCCGTCGTCGTCGCCATTATCTCG------GCACC-TGC-
droEug1	scf7180000409474:2722657-2722769 -		A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGGTATTAGCATAACTCTAGGCAAACAAACATATCGATTTTGCTTT-TG-----GCAATTTCTAGGTCAA--------CTTCGG--TCACCTGCCTCCCCAGTCGCCGTTATCTCG------GCTCC-TGCT
droBia1	scf7180000302291:1728871-1728969 -		T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGCGCATTAGTATATGGGTTGGCAAGC----CAATCGATT--------AA-----GCTGTTTCTAGGTCAA--------CTTCGT--CCACCTGCCGC----GTAGCTATTATCTCG------ACTCC-TACT
droTak1	scf7180000415088:245698-245805 +		T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGCAATGGCATCACGCTAGGCAAAC----CAATCGATTTTACATC-TT-----ACAATTTCTAGGTCAA--------CTTTGG--ACACCTGCTGCATAAGTCGCTGTTATCTCA------GTTCC-TGCT
droEle1	scf7180000491258:149074-149159 +		-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCAAC----AAATCGATTTTACCTC-AG-----GCAATTTCTAGGTCAA--------CTTCTG--TCACCTGCTGCCGCAGTCGCTGTTATCTCG------GCTCC-CGCT
droRho1	scf7180000771908:17-51 -		C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGCTGCTCCCGTGCCTGCTTTG------GCTCC-TGCT
droFic1	scf7180000453215:323014-323104 +		C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGCACAC----AAATCGATTTTAGCTC-TG-----GCGGTTTCTAGGTCAAC-CA----CCTCGG--TCACCTGCTGCCGC-GCGGCTGTTATCTCG------GCTCC-TGCT
droKik1	scf7180000302471:508758-508828 -		T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCTC-AG-----ACAATTTCTAGGTCAA--------CTCCGA--CCACCTGCTCCCGCATCCGCTCTTATCTCG------GCTCC-CGGC
droAna3	scaffold_13266:16208937-16209020 -		A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATTTGGCCTC-TAACGCCCGAATTTCAAGGTCAG--------CATGGGGTTCACCTGCTCCCGCATCC----TTATCTCGTCG---GCTCTTTGTT
droBip1	scf7180000396567:689173-689257 -		A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTGTCCTTATAAAGCCGGAATTTCAAGGACAG--------CATGGGGTTCACCTGCTCCCGCATCC----TTATCTCGTCG---GCTCTTTGTT
dp5	3:5516918-5517018 -		G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCAGCACA-----AAGGAAAT----GTATCGATTTCATCTC-AG-----GCA----CTAGGTCAACACACCGCCTTCGG--GCACCTGTCCACGCATTCGT-CTTATCTCG------GCCCC-CGGG
droPer2	scaffold_2:5716269-5716358 -		A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAAT----GTATCGATTTCATCTC-AG-----GCA----CTAGGTCAACACACCGCCTTCGG--GCACCTGTCCACGCATTCGT-CTTATCTCG------GCCCC-CGGG
droWil2	scf2_1100000011188:1077-1114 +		A-------------------------------AATCAAAAAGCTGGAGAA----------------TCTTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------GTTTT-TACG
droVir3	scaffold_6606:1-39 +		T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGAGGAT--------CTTCGA--TCACCTGATGCCGCGCTAGTTAT-----------------------
droGri2	scaffold_15252:5965695-5965729 -		C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGCTGCTGTTGTCGCTGCTTCT------GCTGC-TGCT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CGAAGCCCATCTCAGAGTTTATAATG---CCAAATCAAAAAGGTAGAGAA----------------ACTCACGTCTGCTTTTATGTAAATTCGTAA-AAAATATTTACGT-TTTACCGTCGCAATCCAAGTTGCTTATAT-CTTTTTGCGATA-----------------------------------------------CAAGCGAATTATTTCCGCATTAGCATATTTCTAGGTAAAC----AAATCGATTTTACCTC-GT-----GCGATTTCTAGGTCAA--------CTTCGG--TCACCTGCTGCCGCAGTCGTTATTATCTCG------GCTCC-TGCT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
................................................................................................................TTACCGTCGCAATCCAAGTTG.....................................................................................................................................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................ATTTCTAGGTCAA--------CTTCGG--TC............................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

CGAAGCGCATCTCAGAGTTTATAATG---GCAAATCAAAAAGGTAGGGAATGGGAATTCGCCCAAAACTCACGTCTGCTTTTATGTAAATTCGTAC-AAAATATTTACGT-TTTACCGTAGCAATCCAAGTTGCTTATAT-CCTTTTGTGATA-----------------------------------------------CAAGCGAATTATTTCCGCATTAGCATATTTCTAGGTAAAC----AAATCGATTTCACCTC-GT-----GCGATTTCTAGGTCAA--------CTTCGG--TCACCTGCTGGCGCAGTCGTTGTTATCTCG------TCTCC-TGCT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

dm3

CAAAGCGCATCTAAGAGTTTATAATG---GCAAATCAAAAAGATAAAGAAAAAGA-------TAAAGCTCACGTCTGCTTTTTCGTAAAATTGTAC-AACATATTTACGT-TTTACCGTCGCCATCCAAGTTCCTTATAT-CCCTTTGTGATG-----AAACGCTG--------------------CTTTCGATAACATTAAAGTGAATTATTTCCGCATTAGCATATTTCTAGGTAAAC----AAGTCGATTTTACCTC-GG-----GCAATTTCTAGGTCAA--------CTTCGG--TCACCTGCTGCCGCAGTCGTTGTTATCTCGTCTCCTGCTCC-TGCT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..........................................................................................................................CATCCAAGTTCCTTATAT-CCCTT........................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................GATG-----AAACGCTG--------------------CTTTCGATA.......................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................CGATTTTACCTC-GG-----GCAA..........................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CTTCGG--TCACCTGCTGCCGC................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................GTCAA--------CTTCGG--TCACCTGC......................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................TTCGG--TCACCTGCTGCCGCAGTCGT..........................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................AAAAAGATAAAGAAAAAT....................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GAA-------------------------------TT----------------------GGGTCTGCCCTCACGTCTGCTG--------------------------------TGACCGTGGCAGTTAACTTTACTCATATTCCTATTGTGATTTTCCACAACGATGCTTAAGATATTACATTAAAGCTCTCCAAAACATAAAAGGGTATTATTTGCGC-TTAGCATAGCTGTAGGTAAAC----AAATCGATATTGCCTC-GG-----GCAATTTCTAAATCAA--------CTTCGG--TCACCTGCCGCCGCAGTCGCGGTTATCTCG------GCTCC-TGCT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droYak3

C-----GCAACTAAAAGTTTAATGGGCTAGAGAGTTTAATAGATAAAGAATTGAAGTACCTCCAAGGATCACGTCTGCTTTTACGTAAGGAATGACAAAAAAATTTGGGTTTTTAACGTCGCAGTTAATTTAACTTATATTCATTTTGCGATTTTCTACAATGATGCTTGGGATTTAACACTAAAGCTCCCAAAAATATAAAAGGGTATTATTTGCGCATAAGCATAGCTCTAGATAAAC----AACTCGAGTTTACCTC-GG-----GCAATTTCTTAGTCAA--------CCTTGG--TCACCTGCCGTCGTCGTCGCCATTATCTCG------GCACC-TGC-

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEug1

A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGGTATTAGCATAACTCTAGGCAAACAAACATATCGATTTTGCTTT-TG-----GCAATTTCTAGGTCAA--------CTTCGG--TCACCTGCCTCCCCAGTCGCCGTTATCTCG------GCTCC-TGCT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGCGCATTAGTATATGGGTTGGCAAGC----CAATCGATT--------AA-----GCTGTTTCTAGGTCAA--------CTTCGT--CCACCTGCCGC----GTAGCTATTATCTCG------ACTCC-TACT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGCAATGGCATCACGCTAGGCAAAC----CAATCGATTTTACATC-TT-----ACAATTTCTAGGTCAA--------CTTTGG--ACACCTGCTGCATAAGTCGCTGTTATCTCA------GTTCC-TGCT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCAAC----AAATCGATTTTACCTC-AG-----GCAATTTCTAGGTCAA--------CTTCTG--TCACCTGCTGCCGCAGTCGCTGTTATCTCG------GCTCC-CGCT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGCTGCTCCCGTGCCTGCTTTG------GCTCC-TGCT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGCACAC----AAATCGATTTTAGCTC-TG-----GCGGTTTCTAGGTCAAC-CA----CCTCGG--TCACCTGCTGCCGC-GCGGCTGTTATCTCG------GCTCC-TGCT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCTC-AG-----ACAATTTCTAGGTCAA--------CTCCGA--CCACCTGCTCCCGCATCCGCTCTTATCTCG------GCTCC-CGGC	Size	Hit Count	Total Norm	Total
No Reads

droAna3

A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATTTGGCCTC-TAACGCCCGAATTTCAAGGTCAG--------CATGGGGTTCACCTGCTCCCGCATCC----TTATCTCGTCG---GCTCTTTGTT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTGTCCTTATAAAGCCGGAATTTCAAGGACAG--------CATGGGGTTCACCTGCTCCCGCATCC----TTATCTCGTCG---GCTCTTTGTT	Size	Hit Count	Total Norm	Total
No Reads

dp5

G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCAGCACA-----AAGGAAAT----GTATCGATTTCATCTC-AG-----GCA----CTAGGTCAACACACCGCCTTCGG--GCACCTGTCCACGCATTCGT-CTTATCTCG------GCCCC-CGGG

Size

Hit Count

Total Norm

Total

M022
Male-body

M040
Female-body

M059
Embryo

M062
Head

V043
Embryo

V051
Head

V112
Male-body

SRR902010
Ovary

SRR902011
Testis

SRR902012
CNS imaginal disc

No Reads

droPer2

A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAAT----GTATCGATTTCATCTC-AG-----GCA----CTAGGTCAACACACCGCCTTCGG--GCACCTGTCCACGCATTCGT-CTTATCTCG------GCCCC-CGGG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droWil2

A-------------------------------AATCAAAAAGCTGGAGAA----------------TCTTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------GTTTT-TACG	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
........................................AGCTGGAGAA----------------TCTTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------GTTTT-....	25	20	0.05	1	0	0	0	1	0

droVir3

T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGAGGAT--------CTTCGA--TCACCTGATGCCGCGCTAGTTAT-----------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGC................................	21	20	209.80	4196	0	0	0	0	0	0	0	0	0	151	18	0	0	426	91	615	0	0	0	0	0	25	0	0	0	0	0	0	0	0	24	0	0	2374	284	0	182	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCGCTAGT..........................	27	20	195.05	3901	0	1	977	0	0	0	0	7	0	22	0	16	0	0	0	775	0	0	0	0	0	9	42	0	0	0	3	0	0	0	0	0	0	0	60	0	0	73	0	43	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1717	154
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCGCTAGTT.........................	28	20	172.25	3445	0	0	0	0	0	0	0	0	2	12	0	0	0	0	54	0	143	66	0	0	0	5	0	0	0	3	2	0	0	0	11	0	0	0	51	0	0	0	1	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	6	0	0	224	3	2827	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCGCT.............................	23	20	130.45	2609	0	0	0	243	0	76	0	0	0	0	6	0	0	0	0	0	0	0	11	0	0	0	0	0	7	2	3	5	0	46	5	0	0	0	0	0	55	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	5	0	0	113	0	2021	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCGCTAGTT.........................	27	20	122.20	2444	0	0	2256	0	0	59	0	16	0	26	2	0	26	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	5	0	0	0	0	0	0	20	0	0	1	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCGCTA............................	24	20	107.55	2151	23	2	460	0	0	0	0	8	0	10	1	12	15	0	0	0	230	0	0	0	22	1	0	0	0	0	4	0	0	31	0	0	0	328	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	983	0
.............................................................................................................................................................................................................................................................................................................CACCTGATGCCGCGCTAGTT.........................	20	20	94.15	1883	9	0	836	0	0	27	1	40	0	0	0	0	0	51	0	0	0	0	0	27	0	0	12	0	3	0	0	0	0	0	13	26	0	788	0	0	0	0	0	45	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGA......................................	20	20	93.45	1869	361	0	525	902	1	8	0	0	0	0	0	0	0	5	0	0	0	0	28	0	0	0	0	6	11	1	0	9	0	9	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCGCTAGT..........................	26	20	77.55	1551	48	0	1089	0	1	0	0	13	3	0	0	12	0	0	0	0	124	62	0	39	0	0	0	8	0	1	0	0	0	58	0	20	24	0	0	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	24
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCC..................................	19	20	55.50	1110	0	0	0	0	5	0	0	0	0	0	4	0	11	71	44	0	37	49	0	0	0	0	0	0	10	3	0	0	0	0	0	0	0	760	0	0	85	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0	0	0	0	0	5	0
.....................................................................................................................................................................................................................................................................................AGAGGAT--------CTTCGA--TCACCTGAT.....................................	22	2	46.00	92	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	92
.............................................................................................................................................................................................................................................................................................................CACCTGATGCCGCGCTAGT..........................	19	20	38.75	775	0	0	0	0	0	0	4	0	9	53	5	32	40	0	0	0	277	0	13	0	0	0	7	17	0	0	0	0	0	0	0	0	106	0	0	0	131	76	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	3	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGC................................	20	20	34.85	697	0	1	0	0	0	0	0	0	23	0	0	88	0	0	0	0	0	0	0	30	0	37	0	0	0	4	0	1	0	0	0	0	54	0	0	0	128	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	325	5	0	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCGCTA............................	25	20	31.65	633	14	0	312	0	0	0	0	0	0	0	0	0	0	0	0	268	0	0	0	0	0	0	0	0	0	1	0	2	7	21	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGAT.....................................	21	20	30.60	612	0	0	0	0	0	0	0	0	0	0	1	2	2	12	104	0	0	79	0	0	0	45	0	1	0	0	0	0	0	0	0	78	0	0	0	0	0	66	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	123	0	0	0	11	2	0	84
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCG.................................	20	20	26.50	530	0	14	0	38	3	0	0	2	2	6	0	8	0	18	0	0	24	0	0	4	0	0	0	0	0	0	0	0	0	0	4	29	8	226	33	0	18	0	3	87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0
........................................................................................................................................................................................................................................................................................................GA--TCACCTGATGCCGCGCT.............................	19	20	25.55	511	7	0	242	22	0	0	0	4	0	0	0	0	0	0	23	0	0	0	0	0	0	6	2	0	4	0	0	0	0	0	0	15	13	90	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	57
..............................................................................................................................................................................................................................................................................................................ACCTGATGCCGCGCTAGTT.........................	19	20	25.10	502	2	0	0	0	0	0	1	0	9	0	0	0	0	17	7	54	0	0	2	8	9	0	3	0	0	0	0	0	0	0	0	0	0	171	75	0	0	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	1	88	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCGC..............................	22	20	21.80	436	29	1	0	159	0	38	0	20	0	0	0	15	0	19	0	0	0	12	0	2	0	0	0	5	0	0	0	0	0	0	5	0	0	0	0	0	0	18	0	45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	63	5	0	0
.......................................................................................................................................................................................................................................................................................................CGA--TCACCTGATGCCGCGCT.............................	20	20	19.40	388	7	0	233	25	0	0	0	0	0	4	0	0	0	13	0	84	0	0	4	3	0	2	2	0	0	1	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCG...............................	21	20	19.25	385	0	0	0	0	0	37	4	17	5	0	0	10	8	0	0	0	0	11	0	0	0	0	0	12	0	0	0	0	0	0	0	0	12	269	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCGCT.............................	24	20	17.70	354	0	0	0	0	0	123	4	16	0	0	0	34	20	0	0	0	0	43	0	26	0	13	0	0	0	0	0	0	0	0	7	0	68	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATGCC..................................	20	20	17.05	341	0	0	0	27	0	0	0	0	1	0	0	0	0	17	0	0	0	8	0	0	243	0	0	0	0	0	3	3	0	0	5	15	0	0	0	8	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATGCCGC................................	22	20	16.45	329	0	0	0	0	0	0	0	32	0	0	3	0	0	0	0	0	0	0	0	0	0	2	3	0	3	1	0	1	2	0	0	0	0	180	0	9	0	14	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	73	0	0	0
.......................................................................................................................................................................................................................................................................................................CGA--TCACCTGATGCCGCGCTAGT..........................	23	20	16.25	325	0	0	142	0	0	0	1	0	0	0	0	0	0	2	0	112	0	0	0	4	0	0	4	0	0	0	0	0	0	0	0	0	0	52	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGC...................................	18	20	15.85	317	22	0	0	55	0	0	0	0	0	0	0	0	0	0	0	16	0	0	0	0	0	6	0	0	0	0	0	1	0	0	4	0	26	163	0	7	0	2	3	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GA--TCACCTGATGCCGCGCTAGTT.........................	23	20	15.80	316	0	0	234	0	0	0	0	0	4	2	0	1	0	0	0	0	61	0	0	0	0	0	7	0	0	0	0	0	2	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATGCCGCGCTAGT..........................	28	20	15.15	303	1	0	0	47	0	0	0	1	0	0	0	0	5	0	0	20	10	2	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	213	0
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGC................................	19	20	13.20	264	0	0	176	0	1	0	0	0	0	3	0	2	0	0	0	0	0	4	0	0	0	0	0	9	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	65	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGCGC..............................	21	20	12.55	251	0	0	143	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	2	1	0	0	0	2	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	15	0	72	0
.......................................................................................................................................................................................................................................................................................................CGA--TCACCTGATGCCGCGCTAGTT.........................	24	20	12.30	246	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	108	34	6	0	6	1	0	0	4	0	0	0	0	0	8	0	0	0	0	10	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	67	0
...............................................................................................................................................................................................................................................................................................................CCTGATGCCGCGCTAGTTAT-----------------------	20	20	12.15	243	1	0	41	11	0	0	0	2	0	6	0	0	0	0	0	100	0	21	0	0	0	0	0	0	0	0	0	0	13	4	0	0	0	11	0	0	7	3	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0	0	0
................................................................................................................................................................................................................................................................................................................CTGATGCCGCGCTAGTTAT-----------------------	19	20	12.00	240	0	0	80	4	0	0	0	0	0	0	0	0	0	0	0	66	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	60	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0
.......................................................................................................................................................................................................................................................................................................CGA--TCACCTGATGCCGCGCTA............................	21	20	11.35	227	0	0	182	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	8	0	0	3	0	0	0	0	0	12	0	0	0	0	0	7	9	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................A--TCACCTGATGCCGCGCTA............................	19	20	11.30	226	0	0	145	7	0	0	0	0	0	0	0	0	0	0	0	16	0	19	0	0	0	0	1	3	0	0	0	0	0	0	5	10	0	6	8	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGATGCCGCGC..............................	28	20	10.75	215	0	0	113	52	0	0	0	3	0	0	0	0	0	0	2	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	8	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATGCCGCGC..............................	24	20	10.60	212	0	0	41	53	0	3	0	13	0	0	0	0	5	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	91	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCG...............................	22	20	10.40	208	0	0	0	0	0	0	6	0	2	14	0	0	0	0	0	138	0	0	0	0	0	2	0	11	0	0	0	0	3	0	0	0	0	0	29	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCC..................................	18	20	9.95	199	106	0	0	15	0	0	0	0	0	0	4	0	0	13	0	8	0	1	0	0	29	0	0	0	3	0	0	0	4	0	0	4	5	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGA......................................	15	20	9.25	185	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	184	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................A--TCACCTGATGCCGCGCTAGT..........................	21	20	9.20	184	1	0	126	0	0	0	0	2	0	0	4	0	0	0	0	0	0	10	0	0	0	0	0	2	0	0	0	2	10	0	0	5	0	0	0	2	10	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCGCTAG...........................	26	20	9.15	183	32	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	2	2	0	0	0	0	1	3	0	0	0	0	3	4	0	0	44	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	61	0
........................................................................................................................................................................................................................................................................................GGAT--------CTTCGA--TCACCTGAT.....................................	19	20	8.85	177	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	172
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGCGCT.............................	22	20	8.60	172	0	0	0	21	0	0	0	0	0	0	0	0	4	0	0	0	10	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	1	85	0
..............................................................................................................................................................................................................................................................................................................ACCTGATGCCGCGCTAGT..........................	18	20	8.40	168	0	0	0	0	0	0	1	39	16	0	0	8	0	0	0	0	0	11	0	3	0	3	3	0	0	0	0	0	6	0	3	6	0	0	0	0	0	29	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCGCTAG...........................	25	20	8.35	167	0	0	108	36	0	0	0	0	0	2	0	0	0	0	0	0	16	0	0	2	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGATGC...................................	23	20	8.35	167	121	0	0	0	0	0	0	0	0	0	0	0	0	0	1	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	8	0	0	12	0	4	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGATGCCGCGCT.............................	29	20	7.60	152	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	8	0	1	57	81
.........................................................................................................................................................................................................................................................................................GAT--------CTTCGA--TCACCTGATGCCGCGCT.............................	26	20	6.70	134	0	0	69	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	8	0	0	0	0	36	0	7	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0
........................................................................................................................................................................................................................................................................................................GA--TCACCTGATGCCGCGCTA............................	20	20	6.05	121	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	85	0	0	0	1	0	0	0	0	0	0	3	0	0	0	0	10	0	0	0	2	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGATG....................................	22	20	6.05	121	0	0	0	81	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	4	0	0	25	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0
.......................................................................................................................................................................................................................................................................................AGGAT--------CTTCGA--TCACCTGATGCC..................................	23	20	5.95	119	0	83	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	12	8	3	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GA--TCACCTGATGCCGCGCTAGT..........................	22	20	5.85	117	0	0	0	0	0	0	0	1	0	0	0	0	0	4	0	0	0	0	7	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	71	2
........................................................................................................................................................................................................................................................................................................GA--TCACCTGATGCCGCGC..............................	18	20	5.70	114	0	0	51	0	0	0	0	0	0	7	0	0	4	0	0	12	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	4	6	20	0	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATGCCGCGCT.............................	25	20	5.60	112	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	3	52	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	33	0	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATGC...................................	19	20	5.35	107	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	2	0	10	0	0	0	0	0	0	10	0	0	51	9	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGG......................................	20	20	4.85	97	96	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................CACCTGATGCCGCGCTAG...........................	18	20	4.75	95	0	0	0	0	1	0	0	0	0	0	0	0	4	0	0	0	13	0	0	0	34	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	13	0	0	0
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGCGCTAGTT.........................	26	20	4.75	95	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	4	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0	56	0
.............................................................................................................................................................................................................................................................................................................CACCTGATGCCGCGCTAGTTA........................	21	20	4.70	94	0	1	57	18	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	4	0	4	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	2
.....................................................................................................................................................................................................................................................................................AGAGGAT--------CTTCGA--TCACCTGATGC...................................	24	2	4.50	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9
.......................................................................................................................................................................................................................................................................................................CGA--TCACCTGATGCCGCGC..............................	19	20	4.20	84	0	0	0	17	0	0	0	0	1	1	0	0	0	0	0	0	12	0	2	0	29	2	0	0	1	0	0	0	0	0	0	0	0	0	9	0	0	0	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGCG...............................	20	20	4.15	83	0	0	57	0	0	0	2	0	0	0	0	1	0	3	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	8	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................ACCTGATGCCGCGCTAGTTAT-----------------------	21	20	4.00	80	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	1	0	0	0	0	1	0	9	0	0	0	0	32	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	4
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCGC..............................	23	20	3.65	73	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	0	1	0	0	0	0	1	0	0	0	0	10	0	0	0	0	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCG.................................	19	20	3.35	67	0	0	0	19	0	0	0	0	1	0	0	0	5	0	0	0	0	0	0	4	0	0	3	0	3	1	4	0	0	0	0	0	0	0	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGATGCCGCG...............................	27	20	3.25	65	23	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	2	4	0	3	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22
......................................................................................................................................................................................................................................................................................................TCGA--TCACCTGATGCCGCGCT.............................	21	20	3.20	64	0	1	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	6	0	2	0	0	24	0	0	0	0	2	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	14
.......................................................................................................................................................................................................................................................................................AGGAT--------CTTCGA--TCACCTGAT.....................................	20	20	3.10	62	0	0	50	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	5	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GA--TCACCTGATGCCGCGCTAGTTAT-----------------------	25	20	3.05	61	0	0	52	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATGCCGCG...............................	23	20	3.05	61	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	7	10	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	28	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0
.........................................................................................................................................................................................................................................................................................GAT--------CTTCGA--TCACCTGATGCCGC................................	23	20	3.00	60	0	0	0	32	0	0	0	5	1	0	3	2	0	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................GAT--------CTTCGA--TCACCTGATGC...................................	20	20	2.85	57	0	0	0	51	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................TCGA--TCACCTGATGCCGCGCTA............................	22	20	2.80	56	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	10	2	0	0	0	0	0	0	3	2	5	0	5	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	9	13
.........................................................................................................................................................................................................................................................................................................A--TCACCTGATGCCGCGCTAGTT.........................	22	20	2.75	55	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	12	0	0	0	0	2	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATGCCGCGCTA............................	26	20	2.75	55	0	1	0	9	1	0	0	0	1	0	0	0	0	0	1	13	0	0	0	0	0	1	0	0	1	0	0	0	0	6	0	0	4	0	0	7	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	4
.............................................................................................................................................................................................................................................................................................................CACCTGATGCCGCGCTAGTTAT-----------------------	22	20	2.75	55	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	6	0	21	0	0	16	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGA......................................	16	20	2.70	54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	54	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................ACCTGATGCCGCGCTAGTTA........................	20	20	2.55	51	0	0	0	0	0	0	0	0	4	0	0	0	0	0	1	0	0	0	0	0	5	0	0	5	0	0	0	6	15	5	0	0	0	0	2	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
......................................................................................................................................................................................................................................................................................................TCGA--TCACCTGATGCCGCGCTAGTT.........................	25	20	2.45	49	0	0	0	13	0	2	0	0	0	0	0	0	0	0	0	18	0	1	0	1	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0
...............................................................................................................................................................................................................................................................................................................CCTGATGCCGCGCTAGTTA........................	19	20	2.45	49	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	6	0	0	0	0	1	0	1	5	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	27
........................................................................................................................................................................................................................................................................................GGAT--------CTTCGA--TCACCTGATGCCGCGC..............................	26	20	2.40	48	0	0	16	10	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	5	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0
........................................................................................................................................................................................................................................................................................GGAT--------CTTCGA--TCACCTGATGC...................................	21	20	2.40	48	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	44
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCGCTAGTTAC-----------------------	30	20	2.30	46	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	46
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTG.......................................	19	20	2.15	43	0	0	0	0	0	6	0	0	0	1	0	0	0	0	0	0	6	0	0	1	0	0	0	0	2	4	0	3	8	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................A--TCACCTGATGCCGCGCTAGTTAT-----------------------	24	20	2.15	43	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	15	0	8	0	0	0	0	2	0	0	0	0	0	4	0	0	0	0	0	0	0	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGAT.....................................	17	20	2.10	42	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	42	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................AGAGGAT--------CTTCGA--TCACCTGATGCCGCGCT.............................	30	2	2.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
........................................................................................................................................................................................................................................................................................GGAT--------CTTCGA--TCACCTGATGCCGCGCT.............................	27	20	1.95	39	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	0
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGCGCTA............................	23	20	1.95	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	4	4	0	0	0	0	0	6	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	5
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGAT.....................................	15	20	1.90	38	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	23	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CGA--TCACCTGATGCCGCGCTAGTTAT-----------------------	26	20	1.80	36	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	2	0	1	1	0	0	2	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	3
........................................................................................................................................................................................................................................................................................GGAT--------CTTCGA--TCACCTGATGCCG.................................	23	20	1.75	35	0	0	26	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATGCCG.................................	21	20	1.75	35	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCGCTAGTTA........................	28	20	1.65	33	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	14	0	2	0	0	5	0	0	0	0	0	0	0	0	5	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCGCTAGTTA........................	29	20	1.65	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGATGCCG.................................	25	20	1.60	32	0	0	0	14	0	0	0	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	3	2	0	2	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATG....................................	18	20	1.55	31	0	0	4	8	0	0	0	6	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0
.....................................................................................................................................................................................................................................................................................AGAGGAT--------CTTCGA--TCACCTGATG....................................	23	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
.....................................................................................................................................................................................................................................................................................AGAGGAT--------CTTCGA--TCACCTG.......................................	20	2	1.50	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................CACCTGATGCCGCGCTA............................	17	20	1.50	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	4	10	5	0	9	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................GAT--------CTTCGA--TCACCTGATGCCGCGCTA............................	27	20	1.45	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	4	0	0	0	0	2	0	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	7	0
.......................................................................................................................................................................................................................................................................................................CGA--TCACCTGATGCCGCG...............................	18	20	1.45	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	18	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCG.................................	18	20	1.35	27	20	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................CTGATGCCGCGCTAGTTA........................	18	20	1.30	26	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	3	0	0	0	0	0	0	3	1	0	0	10	0	3	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................TCGA--TCACCTGATGCCGCG...............................	19	20	1.25	25	0	0	0	3	0	2	0	0	0	0	0	0	0	0	0	9	2	3	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1
........................................................................................................................................................................................................................................................................................GGAT--------CTTCGA--TCACCTGATGCCGCG...............................	25	20	1.25	25	0	0	21	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGAT.....................................	16	20	1.25	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	6	4	0	4	0	0	0	0	0	0	0	0	0	0	0	8
......................................................................................................................................................................................................................................................................................................TCGA--TCACCTGATGCCGCGCTAGT..........................	24	20	1.20	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	4	0	2	0	0	8	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0
.................................................................................................................................................................................................................................................................................................................TGATGCCGCGCTAGTTAT-----------------------	18	20	1.20	24	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	7	0	6	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGCGCTAGTTAT-----------------------	28	20	1.20	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	16	0
............................................................................................................................................................................................................................................................................................................TCACCTGATGCCGCGCTAGTTAT-----------------------	23	20	1.15	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................AGGAT--------CTTCGA--TCACCTGATGCCGC................................	25	20	1.15	23	0	0	19	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TCACCTGATGCCGCGCTAGT..........................	20	20	1.15	23	0	0	0	6	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	4	0	0	4	0	0	1	1	2	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................GGAT--------CTTCGA--TCACCTGAA.....................................	19	20	1.15	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	23
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGATGCCGC................................	26	20	1.15	23	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	15	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................GGAT--------CTTCGA--TCACCTGATGCC..................................	22	20	1.10	22	9	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7
............................................................................................................................................................................................................................................................................................................TCACCTGATGCCGCGCTAGTT.........................	21	20	1.10	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................GAT--------CTTCGA--TCACCTGATGCCG.................................	22	20	1.10	22	0	0	0	5	0	0	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	5	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................GA--TCACCTGATGCCGCGCTAGTTA........................	24	20	1.05	21	0	0	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGCGCTAGT..........................	25	20	1.05	21	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	7	0	5	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
.........................................................................................................................................................................................................................................................................................GAT--------CTTCGA--TCACCTGATG....................................	19	20	1.05	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	4	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	9
.......................................................................................................................................................................................................................................................................................AGGAT--------CTTCGA--TCACCTGATGCCGCGC..............................	27	20	1.05	21	0	0	12	3	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................GGAT--------CTTCGA--TCACCTGATGCCGC................................	24	20	1.05	21	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
............................................................................................................................................................................................................................................................................................................TCACCTGATGCCGCGCTA............................	18	20	1.05	21	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	4	0	0	0	0	0	3	0	0	0	0	0	0	0	1	1	1	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	3	0	0	0
.........................................................................................................................................................................................................................................................................................GAT--------CTTCGA--TCACCTGATGCCGCG...............................	24	20	1.00	20	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	2	0	6	1	0	0	0	0	1	1	0	4	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CGA--TCACCTGATGCCGCGCTAG...........................	22	20	1.00	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................AGAGGAT--------CTTCGA--TCACCTGATGCC..................................	25	2	1.00	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................................................................................................................................................AGAGGAT--------CTTCGA--TCACCTGATGCCGCGCTA............................	31	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
.........................................................................................................................................................................................................................................................................................GAT--------CTTCGA--TCACCTGATGCCGCGC..............................	25	20	1.00	20	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	5	0	0	0	3	0	0	0	0	3	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0
...............................................................................................................................................................................................................................................................................................................CCTGATGCCGCGCTAGTT.........................	18	20	0.95	19	7	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
.........................................................................................................................................................................................................................................................................................................A--TCACCTGATGCCGCGCT.............................	18	20	0.90	18	0	0	0	0	0	3	0	0	0	0	3	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0
......................................................................................................................................................................................................................................................................................................TCGA--TCACCTGATGCCGC................................	18	20	0.85	17	0	0	11	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
............................................................................................................................................................................................................................................................................................................TCACCTGATGCCGCGCTAG...........................	19	20	0.85	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0
.............................................................................................................................................................................................................................................................................................................CACCTGATGCCGCGCTAGC..........................	19	20	0.85	17	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................GAT--------CTTCGA--TCACCTGATGCC..................................	21	20	0.80	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11
.........................................................................................................................................................................................................................................................................................................A--TCACCTGATGCCGCGCTAG...........................	20	20	0.75	15	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0
..........................................................................................................................................................................................................................................................................................AT--------CTTCGA--TCACCTGATGCCGCGCTAG...........................	27	20	0.70	14	5	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	1	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GA--TCACCTGATGCCGCGCTAG...........................	21	20	0.70	14	2	0	0	8	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................AGGAT--------CTTCGA--TCACCTGATGCCG.................................	24	20	0.70	14	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGCGCTAGTTA........................	27	20	0.65	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	3	1	0	4	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................AGGAT--------CTTCGA--TCACCTGATGCCGCGCT.............................	28	20	0.65	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	9	0
......................................................................................................................................................................................................................................................................................................TCGA--TCACCTGATGCCGCGCTAGTTA........................	26	20	0.60	12	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................GAT--------CTTCGA--TCACCTGATGCCGCGCTAGTT.........................	30	20	0.60	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0
......................................................................................................................................................................................................................................................................................................TCGA--TCACCTGATGCCGCGC..............................	20	20	0.55	11	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................A--TCACCTGATGCCGCGCTAGTTA........................	23	20	0.55	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
.....................................................................................................................................................................................................................................................................................AGAGGAT--------CTTCGA--TCACCTGA......................................	21	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................AGAGGAT--------CTTCGA--TCACCT........................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TCACCTGATGCCGCGCT.............................	17	20	0.50	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	9
.....................................................................................................................................................................................................................................................................................AGAGGAT--------CTTCGA--TCACC.........................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGCGCTAGC..........................	25	20	0.50	10	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................GGAT--------CTTCGA--TCACCTGATGCCGCGCTA............................	28	20	0.45	9	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCGCTAGA..........................	26	20	0.45	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0
.............................................................................................................................................................................................................................................................................................................CACCTGATGCCGCGC..............................	15	20	0.45	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	8	0	0	0	0
.....................................................................................................................................................................................................................................................................................................TTCGA--TCACCTGATGCCGCGCTAG...........................	24	20	0.45	9	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACC.........................................	17	20	0.45	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCGCTAGC..........................	27	20	0.45	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................TCGA--TCACCTGATGCCGCGCTAGTTAT-----------------------	27	20	0.40	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCT........................................	18	20	0.40	8	0	0	0	5	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CGA--TCACCTGATGCCGCGCTAGTTA........................	25	20	0.40	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
............................................................................................................................................................................................................................................................................................................TCACCTGATGCCGCGCTAGTTA........................	22	20	0.40	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGATGCC..................................	24	20	0.40	8	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCT...............................	22	20	0.35	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0
.......................................................................................................................................................................................................................................................................................................CGA--TCACCTGATGCCGCGCTAGC..........................	23	20	0.35	7	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATG....................................	17	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	5
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGCGCG.............................	24	20	0.30	6	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCT...............................	21	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0
..............................................................................................................................................................................................................................................................................................................ACCTGATGCCGCGCTAG...........................	17	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	1	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGT................................	20	20	0.25	5	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................CTTCGA--TCACCTGATGCCGCA...............................	21	20	0.25	5	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GA--TCACCTGATGCCGCGCTAGTC.........................	23	20	0.25	5	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCA.................................	20	20	0.25	5	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................AGGAT--------CTTCGA--TCACCTGATGCCGCG...............................	26	20	0.20	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TCACCTGATGCCGCGC..............................	16	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................T--------CTTCGA--TCACCTGATGCCGT................................	21	20	0.20	4	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................CCTGATGCCGCGCTAGT..........................	17	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
......................................................................................................................................................................................................................................................................................GAGGAT--------CTTCGA--TCACCTGAA.....................................	21	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2

droGri2

C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGCTGCTGTTGTCGCTGCTTCT------GCTGC-TGCT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_15857

2r:4709936-4710085 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-25.6	-25.5	-25.4