ID:

dsi_15780

 Coordinate:

2r:18162038-18162208 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.5 -12.2 -12.1 -12.0

Flybase annnotation

five_prime_UTR [2r_18161974_18162199_-]; exon [2r_18161419_18162199_-]

No Repeatable elements found

Sense Strand Reads

-----------------------------------------------------------####################################################################################################################################################################################################################
GTAAATTATTACGGATTTTTCGGACATTTTTCTGTCATTTCCGGAGCAATGTAAGTAGAAAGCATTCGAAAAACCCAATACGCAACAAACACACACACACAAGCCGGACGAAAATGTTGCGCTTGCCAAATTCTGGTTATTAATTTGTTATGAAAACGTCTCTCTCACGGCCGCCTTCTACCTAAAAAAAAAAAATTGGACAAACAACGAAAAACCAAAAGTTGCGCTGCAGAAAAGCAAGTGAGGCCCATTGGATCAGTTGAAAGGATTC
**************************************************************************************************.......((........((((...((((((......(((.........(((.(((...........))).)))........)))..............))).))).))))......))******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 M024
male body		 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
......................................................................................................................................................................ACGGCTGCCTTCAACTTAAAAAAAAAAAA............................................................................ 29 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................ACAAGCCGGACGAAAATGT.......................................................................................................................................................... 19 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
..............................................................................................................................................................................................................................TGCGCTGCAGAAAAGC................................. 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................CATTTTTCTGTCATTTCCGGAGC................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................TTGGACAAACAACGAAAAACC....................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GCAGAAAAGCAAGTGA........................... 16 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................TGGACAGACGACGAAAAACCACA.................................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0
.......................................TCCGGAGCAATGTAAGTAGAAA.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................AAGTAGAAAGCATTCGAAAAA...................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................AGCAATGTAAGTAGAAAGCAA.............................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................ATTTTTCTGTCATTTCCGAAGC................................................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TGGGGCCCATTGGATCAGTTGAAAGGA... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................TTTCGGACATTTTTCTGTCA.......................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
......................................TTCCGGAGCAATGTAAGTAGAAAG................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................CGGCTGCCTTCAACTTAAAAAAAAAAAA............................................................................ 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................AACACACACACACAAGCCGGACGAA............................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
............GGATTTTTCGGACATTTTTCTGT............................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................ACACACAAGCCGGACGAAAATG........................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................CACACACAAGCCGGACGAAAATGTTG........................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.....................................TTTCCGGAGCAATGTAAGTGG..................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................GCAATGTAAGTAGAAAGCATT............................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................AGGCCCATTGGATCAGTTGAA....... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CGGCTGCCTTCAACTTAAAAAAAAA............................................................................... 25 3 5 0.60 3 3 0 0 0 0 0 0 0 0 0
......TATTACGGATTTTTGGGA....................................................................................................................................................................................................................................................... 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................CACAAGCCGGACGGGAAGG........................................................................................................................................................... 19 3 19 0.37 7 1 0 0 0 0 0 0 0 6 0
............GGATGTTTCGGACATTT.................................................................................................................................................................................................................................................. 17 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................GGCCCATTGGATCACTCG......... 18 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0
.........TACGGATTTCTCGGAAATTTG................................................................................................................................................................................................................................................. 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................GGCCCATGGGATTAGTT.......... 17 2 7 0.14 1 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................CACGGCCGTCTTCTA........................................................................................... 15 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTGTTCTGATAACGTCT.............................................................................................................. 17 2 13 0.08 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CATTTAATAATGCCTAAAAAGCCTGTAAAAAGACAGTAAAGGCCTCGTTACATTCATCTTTCGTAAGCTTTTTGGGTTATGCGTTGTTTGTGTGTGTGTGTTCGGCCTGCTTTTACAACGCGAACGGTTTAAGACCAATAATTAAACAATACTTTTGCAGAGAGAGTGCCGGCGGAAGATGGATTTTTTTTTTTTAACCTGTTTGTTGCTTTTTGGTTTTCAACGCGACGTCTTTTCGTTCACTCCGGGTAACCTAGTCAACTTTCCTAAG
*******************************************************.......((........((((...((((((......(((.........(((.(((...........))).)))........)))..............))).))).))))......))************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M053
female body
 O002
Head
 SRR902008
ovaries
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
......................CTGTAAAAAGACAGTAAAGGCTT.................................................................................................................................................................................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................GGTTATGCGTTGTTTGTGTGT................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................GTTCGGCCTGCTTTTACAAC........................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAATTTGGATTTTTTTTTTTTAA.......................................................................... 24 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................AACCTAGTCAACTTTCCTAAG 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
............................AAAGACAGTAAAGGCTTCGTT.............................................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGTTCGGCCTGCTTTTACAAC........................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TTGTTGCTTTTTGGTTTTCAA................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................AGAGAGAGTGCCGGCGGAAGA............................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................GTTTTCGGCCTGCTTTTACAA......................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................TTTGTGTGTGTGTGTTCGGCC.................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................TTTGTGTGTGTGTGTTCGGCCT................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AGTTCGGCCTGCTTTTACAACG....................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................TTCACTCCGGGTAACCTAGT............. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................CCGGCGGAAGATGGATTTTTT.................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................AGAGAGTGCCGGCGGAAGAT........................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTTCGGCCTGCTTTTACAACG....................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTGTGTGTGTGTGTTCGGC..................................................................................................................................................................... 19 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................GAGAAGGTGCCGGCAGAAGAT........................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................ATATGCGTTGTTTGTGT.................................................................................................................................................................................. 17 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................AAAAAGACACAAAAGGCCT.................................................................................................................................................................................................................................. 19 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................TCCTTTTTGGTTTTCCACG.............................................. 19 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................CGGGCAAGCTAATCAACTTT...... 20 3 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................CGCGAATGGCTTAAGACGA...................................................................................................................................... 19 3 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................TGAGTTGTTTGGGTGTCTGTGT.......................................................................................................................................................................... 22 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................AAAAAACAGCACAGGCCTCG................................................................................................................................................................................................................................ 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................AGTTTTTTGGGTTATG.............................................................................................................................................................................................. 16 1 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTACCCTGTTTGTTG............................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AATGCCGGCGGCAAATGGA........................................................................................ 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................GTTTGGGTTATGCGTGG......................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:18161988-18162258 - dsi_15780 GTA----AATTATTACGGAT----------TT-TTCGGACATTTTTCTGTCATTT-CCG---------------GAGCAATGTAAGTAGAAAGCATTCGAAAAACCCAATA----------------------------CGCAACAA-------A--CAC-ACA--CA--C--ACAAGCC-----------------GGAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTTCTA--CC------------------------------------------------------------------------------------------T----AA-AAAAA-AAAAATTGGACA--AA-CAACGAA-AAACCAAAAGT-----TGCGCTGCAGAAA-----AGCAAG-TGAGGC---------------------------------------------------CCATTGGATCAGTTGAAAGG-----------------------AT-TC
droSec2 scaffold_9:933036-933305 - GTA----AATTATTACGGAT----------TT-CTCGGACATTTTTCTGTCATTT-CCG---------------GAGCAATGTAAGTAGAAAGCATTTGAAAAACCCAATA----------------------------CGCAACAA-------A--CAC-ACA--CA--C--ACAAGCC-----------------GGAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTTCTA--CC------------------------------------------------------------------------------------------T----AA--AAAA-AAAAATTGGACA--AA-CAACGAA-AAACCAAAAGT-----TGCGCTGCAGAAA-----AGCAAG-TGAGGC---------------------------------------------------CCATTGGATCAGTTGAAAGG-----------------------AT-TC
dm3 chr2R:17607155-17607409 - GTA----AATTATTACGGAT----------TT-CTCGGACATTTTTCTGTCATTT-CCC---------------GAGCAATGTAAGTAGAAAGCATTCGAAAAACCCAATA----------------------------CGCAACAA-------A--CAC-ACG--CA--C--ACAAGCC-----------------GGAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTTCTA--CC------------------------------------------------------------------------------------------T----AA-AAAAA-AAAAATTGGACA--AA-CAACGAA-AAACCAAAAG--------------------------CAAG-TGAGGC---------------------------------------------------CCATTGGATCAGTTGAAAGG-----------------------AT-TC
droEre2 scaffold_4845:11756297-11756570 - GTA----AATTATTACGGAT----------TA-CCCGGACATTTTTCTGTCATTT-TCC---------------GAGCAATGTAAGTACAAAGCATTCGAAAAACCTAATC----------------------------CGCAACAA-------A--CAC-ACA--CA--C--AAAACCC-----------------GAAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-GTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTA--CC------------------------------------------------------------------------------------------T----GAAAAAAA-CAAAATTGGAAA--AA-TAACGAAAAAACCAAAAGT-----TGCGCTGCAGAAA-----AGCAAG-TGAGCT---------------------------------------------------CCATTGGATCAGTAGAAAGG-----------------------TTACC
droYak3 2R:11562980-11563249 + GTA----AATTCTTACGAAT----------TT-CCCGGACATTTTTCTGTCATTT-CCC---------------GAGCAATGTAAGTAGAAAGCATTCGAAAAACCTAATC----------------------------CGCAACAA-------A--CAC-ACA--CA--C--AAAACCC-----------------GGAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-GTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTTCTA--TA------------------------------------------------------------------------------------------T----GG----AA-AAAAATTGGACA--AA-CAACGAAGAAACCAAAAGT-----TGCGCTGCAGAAT-----AGCAAG-TGAGGT---------------------------------------------------CCATTGGATCAGTTGAAAGG-----------------------ATACC
droEug1 scf7180000409672:7427799-7428067 - GTA----AAATATTACGGAT----------TA-TCCGGACATTTTTCTGTCACTT-CTC---------------AAGCAATGTAAGTATAAAGCATTTGAAAAACACCAAC----------------------------CACAACAG-------A--CAC---A--CA--C--AAAACAC-----------------ATAC-----------------------GAAAATGTTGCCCAA-GCTAA--------ATT-CTGATTACTAA-T------------------TT---ATTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTGAAA------------------------------------------------------------------------------------------------T--AAAA-AAAAATTGGAAA--AA-CAACGAAGAAACCAAAAGT-----AGCGCTGCGAAAT-----AGCTAA-AAATAC---------------------------------------------------GAATACGATCAGATCTAAGG-----------------------AA-GA
droBia1 scf7180000301754:4709822-4710101 - GTA----AATTACTACGGAT----------TT-CCCGGACATTTTCCTGTCATTTTCCA---------------GAGCAATGTGAGTATTAGGCATTCGAAACACACCAAC----------------------------TGCAGCAGAAACATCGAACAC---A--CA--C--GCAAAAC-----------------AGGC-----------------------GAAAATGTTGCGCTT-CCCAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTG---------------------------------------------------------------------------------------------------A-----A-AAAAATTGGAAA--AC-CCACGGAAAACCTCAGATA-----AGTGCTGCGGAAA-----AGCAAG-CGA-ATC-GAAAAGG------------------------------------------ACACAGGATCCGATCTGCGG-----------------------AA-GC
droTak1 scf7180000415238:336475-336752 - GTA----AATTATTACGGAT----------TT-CCCGGACATTTTCCTGTCAATT-CCT---------------GAGCAATGTAAGTAGAAAGCATTCGAAAAACACCAAT----------------------------TGCACCGA-------A--CACAACG--CA--C--ACAAAAC-----------------AGAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-CTGGTTACTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTG---------------------------------------------------------------------------------------------------A--AAAT-AAAAATTGGAAA--AACCAACGGAAAAACCAAAAGT-----AGCGCTGCGGAAT-----AAAGAG-TAA--------ATAT--------------------------ATATAGG---------ACTTAGGATCTGTGAAGAGG-----------------------AG-AC
droEle1 scf7180000491186:261190-261459 - GTA----AATTATTACGGAT----------TT-CCCGGAAATTTTCCTGTCAGT--CGA---------------GAGCAATGTAAGTAGAAAGCATTTGAAAAACAACAAC----------------------------CGCACCAC-------A--CAC-ACAAACA--T--ACAAAGC-----------------GAAT-----------------------GAAAATGTTGCGCTG-ACAAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTG---------------------------------------------------------------------------------------------------A-------AAAAATTGCA-A--AT-CAACGAAGAGACCAAAAGT-----AGCGCTGCGGAAT-----AGCCAA-TAAAATA-T--AAAT------------------------------------------ATATAGGATCAGATCTAAGG-----------------------AA-TC
droRho1 scf7180000778397:7950-8209 - GTA----AATTATTACGGAT----------TT-CCCGGACATTTTCCTGTCAGT--CGA---------------GAGCAATGTAAGTAGAAAGCATTCGAAAAACACCAAC----------------------------CGCACCAC-------A--CAC---A--CAG-C--A-AAAGC-----------------AGAC-----------------------GAAAATGTTGCACCA-GCAAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTG---------------------------------------------------------------------------------------------------A-------AAAAATTGGA-A--AT-CAACGAAAGAACCAAAAGC-----AGCGCTGCGGAAT-----AGCCAG-TAAAAT---------------------------------------------------ACATAGGATCAGATCTAAGG-----------------------AA-TC
droFic1 scf7180000453858:12446-12712 - GTA----AATTAATACGGAT----------AT-CCCGGACATTTTCCTGTCAAT--CGA---------------GAGCAAAGTAAGTAAAAAGTATTTGAAAAACATCCAT--------------------------CTCACAACA------------A---CA--CA--C--AAAACTC-----------------AGCT-----------------------AAAAATGTTGCGCTT-ACAAA--------ATT-CTGGTTACTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTG---------------------------------------------------------------------------------------------------A-----A-AAAATTTGGA-A--CA-CAACGGAAAACCCAAAAGA-----AACGCTGCGGAAT-----AGCCAA-TTAAATAGT--ATAT------------------------------------------ATATAGGATCAGATCTAAGG-----------------------AA-TC
droKik1 scf7180000302366:343801-344075 + GTT----AATTTATACGGATTTTCCCCCATTT-CCCGGACATTTTCCTGTCAATC-G-AG-------A------GAGCACAGTAGGTAAAATTCAATCCC--------------------------------------------------------------CA--CA--C--ACACATC-----------------ACAC-----------------------GAAAATGCATCGCAA-ACTAA--------ATT-CTGGTAATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACCGCCGCCTCCTC--TC------------------------------------------------------------------------------------------TTCGCCA--AAAA-TAAAACTGAAAT--AACCGAAA-TAAAGCCAAGGGG-----AAGGC-GCAT----------------------------------------AACGACGATTACAAAGAAATAGGGCAAAAGGAAACCAGGAACAGAGAAAAGG-----------------------G----
droAna3 scaffold_13266:11005023-11005313 - GTA----AATTAAGACGAAA----------TT-CCCGAACATTTTCCTGTCAGAC-G-AG--------------ACAGCATGTAAGTAGAATCTATTCCT-----------CGGCAAAGGCGAGCTTAGAAACAACAACTACAGAAA-------C--TAC-TGA--CG--A--AAAAGCG-----------------ACCC-----------------------GAAAATGTTGCGCAT-CAAAA--------TTT-CTGGTTACTAACT------------------TT---GTTATGAAAACGTCTC-TCTCGCCGCCGCCTCCTTGAACCGAACCGAATAAAACCACCCACCGAAATTGG---GGCAACAAAAGA--AGCGC---------------------------------------------------------------------------------ACAGCA-----GCTGCTGCGGAACA--ATATCCAG-------------------------------------------------------------------AAGTT--GTGG-----------------------AA-TC
droBip1 scf7180000396547:1459309-1459600 + GTA----AATTAAGACGAAA----------TT-CCCGAACATTTTCCTGTCAGAC-G-AG-------A------CAGCAATGTAAGTAGAATCTATTCCT-----------CGCCAAAGGGGAACTTGGAAACAAAACCTACAGCAA-------C--TAC-TAA--CG--A--AAAACCA-----------------AATC-----------------------GAAAATGTTGCGCAT-CAAAA--------TTT-CTGGTTACTAACT------------------TT---GTTATGAAAACGTCTC-TCTCGCCGCCGCCTCCTTGAACCGAACCGAATAAAACCACCCACCGAAACTGG---GGCAACAAAAGA--AGCGC---------------------------------------------------------------------------------ACAGCA-----TTCGCTGCGGAACA--ATACCCAG-------------------------------------------------------------------AAGTT--GTGG-----------------------AA-TC
dp5 3:15173387-15173624 - -TA----AATTTATACAGAA----------TT-TGCGAATATTTTCCTGTCATT--AAA---------------GAACAATGTAAGTAGACA----------------------------------------------------C---------AAACAC-ACG------C--ACAAGACAGGAGCAACGAACTCGCATTG-----------------------CAAAATGTTGCACAA-CCAAA--------ATT-CCATGTCCTAA-T------------------TT---GTTCTGAAAACGTCTC-TCTCACCGCCTCCTCAAA--AC------------------------------------------------------------------------------------------T----GA-ACAAAAAA-----------------------------------------------------------------------------------------AACATCGATTGCTGGTAAATACACCAAGAAGAGGCC-----CAGACCC------------------CCCGAGCGAAC-CC
droPer2 scaffold_4:3877421-3877658 + -TA----AATTTATACAGAA----------TT-TGCGATTATTTTCCTGTCATT--AAA---------------GAACAATGTAAGTAGACA----------------------------------------------------C---------AAACAC-ACG------C--ACAAGACAGGAGCAACGAACTCGCATTG-----------------------CAAAATGTTGCACAA-CCAAA--------ATT-CCATGTCCTAA-T------------------TT---GTTCTGAAAACGTCTC-TCTCACCGCCTCCTCAAA--AC------------------------------------------------------------------------------------------T----GA-ACAAAAAA-----------------------------------------------------------------------------------------AACATCGATTGCTGTTAAATCCCCCAAGAAGAGGCC-----CAGACCC------------------CCCGAGCGAAC-CC
droWil2 scf2_1100000004514:2875764-2876086 - GAA----AAATT-CATAAAT----------CTAGACGAAGTTTTCCTTGTCAATT-G-TGTAAAAGGAAAACATTAATATTGTAAGT-------ATTACATAAACAGT-TA----------------------------CGCA-CAC--AC---A--CTC---A--CACCTACAACACAC-----------------AGCG-----------------------CAAAATGTTGCAAGAACCAAA--------ATT-CCAAATGCTAA-TTGTTTTCGTATAATTTTTCTTTCCCAAAAAAAACGTCTC-TCTCAACGCCTCC---CAG------------------------------------------------------------------------------------------------------AGAA-AAAAGTTGAATAAGAT-CTAAAAAAAAACAAAAAACAAACGCCTGCTGC------TTGTTGCCAA-A--------------------------------------------------AGA--CGACGAGGAAGAGAAAGAAGAACAGCTGCATCCCCCCATAACACAA-TC
droVir3 scaffold_12875:10159078-10159357 - TAA----AATTAACACGGAA----------TA-TACGGAAGTTTTTCTGTCAGTT-CT-----------------AAAAATGTAAGTAGCACAAAATTAACAAAAAGT-----------------------------------------------------------------------------------------------TCCTCGACGCAACA-AACAGCAAATATGTTGTGCAA-TCTCTACTT--AAATTACCAGTGATTTA-T-----------AA-----CT---GTTATGAAAACGTCTC-TCTCCCAA-CGCCACCCAT-------------AACA-----T-------CTGGCCGTGTCCCA---GCCTAGC-----GCCGCAGCCACACCCCCTGCAGCCG-----------------------------------------------------------------------C------CTGTAGCCCGACG-TGTC-GAAGTGGACACCGGATCAACAACG-TTG------------------------------CAGTTAAA------------------------------G
droMoj3 scaffold_6496:16857332-16857623 + AGA----ATTTA-CACGGCATATACGAAT-CTATACGGAAGCATTTCTGTCAGTT-C-----------------GAAAAATGTAAGTAACACAAAATTAACAAAATC------------------------------------------------------------------------------------------------TCCACGACACATTAAAATAGCAAACATGTTGTGCAA-TCTGAACTT--AAATTACCAGTGATTTA-T-----------AA-----CT---GTTATGAAAACGTCTCCTCTCCCAAACGCCCAACG--CC---------TAACAAAATCC-------CTGGCCGTGCCCCAATAGC--AGTGTCCCGCAGCAGT---------CGCAGCCGCCCCCCATCCC-----------------------------------------------------------------------AGTCGGACG-AGGG-CAAATAC------------------------------------------ATACGAGAGAGGAGCCAAAG----------------------------
droGri2 scaffold_15245:3318922-3319204 - TCATCAATACTCATACGGAT----------TG-AACAAAAGCTTTGCTGTCACTT-T-----------------AAAAAATGTAAGTAC-------TCCAAATACATAAGA----------------------------AGAAAAAC-------AAACAC---A--CA--C--GAAACAC-----------------GAAAATTCCTCGATGCAACA-AACAGCAAAAATGTTGTGCAA-TCTGAACATCAAAATTGCCAGTGATTTG-T-----------AAATTTTGT---GTTATGAAAA-ATCTC-TCTCTCAAAAT--TTATA--T----------------------------TTGGCTGTGT-----AAGC--AGC-----GCAGCAGC--------------------------C----GG-GC----------------------------------AAGAAA-----AGCGATTCGAGGT-----TGAC--------T---------------------------------------------------CCA-ACGATTAGTAGAG-----------------------------AG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTA----AATTATTACGGAT----------TT-TTCGGACATTTTTCTGTCATTT-CCG---------------GAGCAATGTAAGTAGAAAGCATTCGAAAAACCCAATA----------------------------CGCAACAA-------A--CAC-ACA--CA--C--ACAAGCC-----------------GGAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTTCTA--CC------------------------------------------------------------------------------------------T----AA-AAAAA-AAAAATTGGACA--AA-CAACGAA-AAACCAAAAGT-----TGCGCTGCAGAAA-----AGCAAG-TGAGGC---------------------------------------------------CCATTGGATCAGTTGAAAGG-----------------------AT-TCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................ACAAGCC-----------------GGAC-----------------------GAAAATGT.......................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCTGCAGAAA-----AGC.............................................................................................................1611.00100000001000000000
.......................................CATTTTTCTGTCATTT-CCG---------------GAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGACA--AA-CAACGAA-AAACC.............................................................................................................................................2111.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAA-----AGCAAG-TGA......................................................................................................1611.00100000010000000000
......................................................T-CCG---------------GAGCAATGTAAGTAGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
...................................................................................AAGTAGAAAGCATTCGAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...........................................................................AGCAATGTAAGTAGAAAGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...............................T-TTCGGACATTTTTCTGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.....................................................TT-CCG---------------GAGCAATGTAAGTAGAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
..................................................................................................................................................A-------A--CAC-ACA--CA--C--ACAAGCC-----------------GGAC-----------------------GAA............................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
................GGAT----------TT-TTCGGACATTTTTCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...................................................................................................................................................................A--CA--C--ACAAGCC-----------------GGAC-----------------------GAAAATG........................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..................................................................................................................................................................CA--CA--C--ACAAGCC-----------------GGAC-----------------------GAAAATGTTG.....................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
............................................................................GCAATGTAAGTAGAAAGCATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGC---------------------------------------------------CCATTGGATCAGTTGAA...............................2111.00100000001000000000
droSec2
GTA----AATTATTACGGAT----------TT-CTCGGACATTTTTCTGTCATTT-CCG---------------GAGCAATGTAAGTAGAAAGCATTTGAAAAACCCAATA----------------------------CGCAACAA-------A--CAC-ACA--CA--C--ACAAGCC-----------------GGAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTTCTA--CC------------------------------------------------------------------------------------------T----AA--AAAA-AAAAATTGGACA--AA-CAACGAA-AAACCAAAAGT-----TGCGCTGCAGAAA-----AGCAAG-TGAGGC---------------------------------------------------CCATTGGATCAGTTGAAAGG-----------------------AT-TCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................T-CCG---------------GAGCAATGTAAGTAGAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.............TACGGAT----------TT-CTCGGACAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
GTA----AATTATTACGGAT----------TT-CTCGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGAAA-----AGCAAG-TGAGGC---------------------------------------------------................................................2211.0010001
dm3
GTA----AATTATTACGGAT----------TT-CTCGGACATTTTTCTGTCATTT-CCC---------------GAGCAATGTAAGTAGAAAGCATTCGAAAAACCCAATA----------------------------CGCAACAA-------A--CAC-ACG--CA--C--ACAAGCC-----------------GGAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTTCTA--CC------------------------------------------------------------------------------------------T----AA-AAAAA-AAAAATTGGACA--AA-CAACGAA-AAACCAAAAG--------------------------CAAG-TGAGGC---------------------------------------------------CCATTGGATCAGTTGAAAGG-----------------------AT-TCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................GAT----------TT-CTCGGACATTTTTCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003800200000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCAGTTGAAAGG-----------------------A....1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AT----------TT-CTCGGACATTTTTCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................ACAAGCC-----------------GGAC-----------------------GAAAATG........................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000001000000001000000000000000
................GGAT----------TT-CTCGGACATTTTTCTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TTT-CCC---------------GAGCAATGTAAGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------CAAG-TGAGGC---------------------------------------------------CCATTGGATC......................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGC---------------------------------------------------CCATTGGATCAGTTG.................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................C--ACAAGCC-----------------GGAC-----------------------GAAAATGTTGCGC..................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..............ACGGAT----------TT-CTCGGACATTTTTCTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................GAT----------TT-CTCGGACATTTTTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..A----AATTATTACGGAT----------TT-CTCGGACATTTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................ATTT-CCC---------------GAGCAATGTAAGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000
........ATTATTACGGAT----------TT-CTCGGACAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................TT-CTCGGACATTTTTCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTTTCTGTCATTT-CCC---------------GAGCAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................T----------TT-CTCGGACATTTTTCTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................C---------------GAGCAATGTAAGTAGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG-TGAGGC---------------------------------------------------CCATTGGATCAGTTG.................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TGCGCTT-GCCAA--------ATT-CTGGTT........................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGC---------------------------------------------------CCATTGGATCAGTTGAA...............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATTACGGAT----------TT-CTCGGACATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------------CCATTGGATCAGTTGAAAGG-----------------------.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
........ATTATTACGGAT----------TT-CTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------------------------------------------CCATTGGATCAGTTGAA...............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
......................................................T-CCC---------------GAGCAATGTAAGTAGAAAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................T-CCC---------------GAGCAATGTAAGTAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGACA--AA-CAACGAA-AA................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................GTCATTT-CCC---------------GAGCAATGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................C--ACAAGCC-----------------GGAC-----------------------GAAAATGTT......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................ACATTTTTCTGTCATTT-CCC---------------GAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................TTCTGTCATTT-CCC---------------GAGCAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GCAATGTAAGTAGAAAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................AGCC-----------------GGAC-----------------------GAAAATGTTGCGCT.................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................G--CA--C--ACAAGCC-----------------GGAC-----------------------GAAAATGT.......................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............TTACGGAT----------TT-CTCGGACAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GTCATTT-CCC---------------GAGCAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TCTC-TCTCACGGCCGCCTT..........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACGGAT----------TT-CTCGGACATTTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..A----AATTATTACGGAT----------TT-CTCGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................T-CCC---------------GAGCAATGTAAGTAGAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-TGAGGC---------------------------------------------------CCATTGGATCAGTT..................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AACGTCTC-TCTCACGGCCGCCT...........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................ACG--CA--C--ACAAGCC-----------------GGAC-----------------------GAAAATGTTG.....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CAC-ACG--CA--C--ACAAGCC-----------------GGAC-----------------------G..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TGTCATTT-CCC---------------GAGCAATGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGC---------------------------------------------------CCATTGGATCAGTTGA................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TGAGGC---------------------------------------------------CCATTGGATCAG....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TA----AATTATTACGGAT----------TT-CTCGGACATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TT---GTTATGAAAACGTCTC-TCT......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAG--------------------------CAAG-TGAGGC---------------------------------------------------CCATTGGAA.......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..A----AATTATTACGGAT----------TT-CTCGGACATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGC---------------------------------------------------CCATTGGATCAGTTGA................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCAGTTGAAAGG-----------------------AT-T.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------------------------------------------CCATTGGATCAGTTGAAAGG-----------------------AT-TC2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AATTATTACGGAT----------TT-CTCGGACATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........ATTACGGAT----------TT-CTCGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCAGTTGAAAGG-----------------------AT-T.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................ATTT-CCC---------------GAGCAATGTAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................GAAAGCATTCGAAAAACCCAATA----------------------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGC---------------------------------------------------CCATTGGATCAGT...................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGC---------------------------------------------------CCATTGGATCAGTT..................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................ACAAGCC-----------------GGAC-----------------------GAAAATGTTGCGCT.................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................TCTGTCATTT-CCC---------------GAGCAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TGAGGC---------------------------------------------------CCATTGGATCAGTT..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................AA--------ATT-CTGGTTATTAA-T------------------TT---GT........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............TTACGGAT----------TT-CTCGGACATTTTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TACGGAT----------TT-CTCGGACATTTTTCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTACGGAT----------TT-CTCGGACATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTACGGAT----------TT-CTCGGACATTTTTCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................CCC---------------GAGCAATGTAAGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............TACGGAT----------TT-CTCGGACATTTTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATTACGGAT----------TT-CTCGGACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CATTT-CCC---------------GAGCAATGTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................AC-ACG--CA--C--ACAAGCC-----------------GGA.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................T-CCC---------------GAGCAATGTAAGTAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--------------------------CAAG-TGAGGC---------------------------------------------------CCATTGGATCAG....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACGGAT----------TT-CTCGGACATTTTTCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACA--AA-CAACGAA-AAACCAAAAG--------------------------..............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTATTACGGAT----------TT-CTCGGACAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................C--ACAAGCC-----------------GGAC-----------------------GAAAATGTTG.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................CAA-------A--CAC-ACG--CA--C--ACAAGCC-----------------GGAC-----------------------...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TTATGAAAACGTCTC-TCTCAC...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................ATTTTTCTGTCATTT-CCC---------------GAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..A----AATTATTACGGAT----------TT-CTCGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAG--------------------------CAAG-TGAGGC---------------------------------------------------CCATTGGATCAGT...................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
GTA----AATTATTACGGAT----------TA-CCCGGACATTTTTCTGTCATTT-TCC---------------GAGCAATGTAAGTACAAAGCATTCGAAAAACCTAATC----------------------------CGCAACAA-------A--CAC-ACA--CA--C--AAAACCC-----------------GAAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-GTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTA--CC------------------------------------------------------------------------------------------T----GAAAAAAA-CAAAATTGGAAA--AA-TAACGAAAAAACCAAAAGT-----TGCGCTGCAGAAA-----AGCAAG-TGAGCT---------------------------------------------------CCATTGGATCAGTAGAAAGG-----------------------TTACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................CATTTTTCTGTCATTT-TCC---------------GAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG-TGAGCT---------------------------------------------------CCATTGGATCAGTAGAAAG.............................2811.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---------------------------------------------------CCATTGGATCAGTAGAAAG.............................2111.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----AGCAAG-TGAGCT---------------------------------------------------CCATTG..........................................1911.0010000010
droYak3
GTA----AATTCTTACGAAT----------TT-CCCGGACATTTTTCTGTCATTT-CCC---------------GAGCAATGTAAGTAGAAAGCATTCGAAAAACCTAATC----------------------------CGCAACAA-------A--CAC-ACA--CA--C--AAAACCC-----------------GGAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-GTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTTCTA--TA------------------------------------------------------------------------------------------T----GG----AA-AAAAATTGGACA--AA-CAACGAAGAAACCAAAAGT-----TGCGCTGCAGAAT-----AGCAAG-TGAGGT---------------------------------------------------CCATTGGATCAGTTGAAAGG-----------------------ATACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGAAT-----AGCAAG-TGAGGT---------------------------------------------------CCATTG..........................................2811.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----TGCGCTGCAGAAT-----AGCAAG-.........................................................................................................2111.00100000010000
...........CTTACGAAT----------TT-CCCGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000
..................AT----------TT-CCCGGACATTTTTCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAAAAGT-----TGCGCTGCAGA.......................................................................................................................2111.00100000010000
..............ACGAAT----------TT-CCCGGACATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAT-----AGCAAG-TGAGGT---------------------------------------------------CCATTG..........................................2311.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGT-----TGCGCTGCAGAAT-----AGCAAG-TGA......................................................................................................2711.00100000010000
droEug1
GTA----AAATATTACGGAT----------TA-TCCGGACATTTTTCTGTCACTT-CTC---------------AAGCAATGTAAGTATAAAGCATTTGAAAAACACCAAC----------------------------CACAACAG-------A--CAC---A--CA--C--AAAACAC-----------------ATAC-----------------------GAAAATGTTGCCCAA-GCTAA--------ATT-CTGATTACTAA-T------------------TT---ATTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTGAAA------------------------------------------------------------------------------------------------T--AAAA-AAAAATTGGAAA--AA-CAACGAAGAAACCAAAAGT-----AGCGCTGCGAAAT-----AGCTAA-AAATAC---------------------------------------------------GAATACGATCAGATCTAAGG-----------------------AA-GASizeHit CountTotal NormTotal
No Reads
droBia1
GTA----AATTACTACGGAT----------TT-CCCGGACATTTTCCTGTCATTTTCCA---------------GAGCAATGTGAGTATTAGGCATTCGAAACACACCAAC----------------------------TGCAGCAGAAACATCGAACAC---A--CA--C--GCAAAAC-----------------AGGC-----------------------GAAAATGTTGCGCTT-CCCAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTG---------------------------------------------------------------------------------------------------A-----A-AAAAATTGGAAA--AC-CCACGGAAAACCTCAGATA-----AGTGCTGCGGAAA-----AGCAAG-CGA-ATC-GAAAAGG------------------------------------------ACACAGGATCCGATCTGCGG-----------------------AA-GCSizeHit CountTotal NormTotal
No Reads
droTak1
GTA----AATTATTACGGAT----------TT-CCCGGACATTTTCCTGTCAATT-CCT---------------GAGCAATGTAAGTAGAAAGCATTCGAAAAACACCAAT----------------------------TGCACCGA-------A--CACAACG--CA--C--ACAAAAC-----------------AGAC-----------------------GAAAATGTTGCGCTT-GCCAA--------ATT-CTGGTTACTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTG---------------------------------------------------------------------------------------------------A--AAAT-AAAAATTGGAAA--AACCAACGGAAAAACCAAAAGT-----AGCGCTGCGGAAT-----AAAGAG-TAA--------ATAT--------------------------ATATAGG---------ACTTAGGATCTGTGAAGAGG-----------------------AG-ACSizeHit CountTotal NormTotal
No Reads
droEle1
GTA----AATTATTACGGAT----------TT-CCCGGAAATTTTCCTGTCAGT--CGA---------------GAGCAATGTAAGTAGAAAGCATTTGAAAAACAACAAC----------------------------CGCACCAC-------A--CAC-ACAAACA--T--ACAAAGC-----------------GAAT-----------------------GAAAATGTTGCGCTG-ACAAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTG---------------------------------------------------------------------------------------------------A-------AAAAATTGCA-A--AT-CAACGAAGAGACCAAAAGT-----AGCGCTGCGGAAT-----AGCCAA-TAAAATA-T--AAAT------------------------------------------ATATAGGATCAGATCTAAGG-----------------------AA-TCSizeHit CountTotal NormTotal
No Reads
droRho1
GTA----AATTATTACGGAT----------TT-CCCGGACATTTTCCTGTCAGT--CGA---------------GAGCAATGTAAGTAGAAAGCATTCGAAAAACACCAAC----------------------------CGCACCAC-------A--CAC---A--CAG-C--A-AAAGC-----------------AGAC-----------------------GAAAATGTTGCACCA-GCAAA--------ATT-CTGGTTATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTG---------------------------------------------------------------------------------------------------A-------AAAAATTGGA-A--AT-CAACGAAAGAACCAAAAGC-----AGCGCTGCGGAAT-----AGCCAG-TAAAAT---------------------------------------------------ACATAGGATCAGATCTAAGG-----------------------AA-TCSizeHit CountTotal NormTotal
No Reads
droFic1
GTA----AATTAATACGGAT----------AT-CCCGGACATTTTCCTGTCAAT--CGA---------------GAGCAAAGTAAGTAAAAAGTATTTGAAAAACATCCAT--------------------------CTCACAACA------------A---CA--CA--C--AAAACTC-----------------AGCT-----------------------AAAAATGTTGCGCTT-ACAAA--------ATT-CTGGTTACTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACGGCCGCCTCCTTG---------------------------------------------------------------------------------------------------A-----A-AAAATTTGGA-A--CA-CAACGGAAAACCCAAAAGA-----AACGCTGCGGAAT-----AGCCAA-TTAAATAGT--ATAT------------------------------------------ATATAGGATCAGATCTAAGG-----------------------AA-TCSizeHit CountTotal NormTotal
No Reads
droKik1
GTT----AATTTATACGGATTTTCCCCCATTT-CCCGGACATTTTCCTGTCAATC-G-AG-------A------GAGCACAGTAGGTAAAATTCAATCCC--------------------------------------------------------------CA--CA--C--ACACATC-----------------ACAC-----------------------GAAAATGCATCGCAA-ACTAA--------ATT-CTGGTAATTAA-T------------------TT---GTTATGAAAACGTCTC-TCTCACCGCCGCCTCCTC--TC------------------------------------------------------------------------------------------TTCGCCA--AAAA-TAAAACTGAAAT--AACCGAAA-TAAAGCCAAGGGG-----AAGGC-GCAT----------------------------------------AACGACGATTACAAAGAAATAGGGCAAAAGGAAACCAGGAACAGAGAAAAGG-----------------------G----SizeHit CountTotal NormTotal
No Reads
droAna3
GTA----AATTAAGACGAAA----------TT-CCCGAACATTTTCCTGTCAGAC-G-AG--------------ACAGCATGTAAGTAGAATCTATTCCT-----------CGGCAAAGGCGAGCTTAGAAACAACAACTACAGAAA-------C--TAC-TGA--CG--A--AAAAGCG-----------------ACCC-----------------------GAAAATGTTGCGCAT-CAAAA--------TTT-CTGGTTACTAACT------------------TT---GTTATGAAAACGTCTC-TCTCGCCGCCGCCTCCTTGAACCGAACCGAATAAAACCACCCACCGAAATTGG---GGCAACAAAAGA--AGCGC---------------------------------------------------------------------------------ACAGCA-----GCTGCTGCGGAACA--ATATCCAG-------------------------------------------------------------------AAGTT--GTGG-----------------------AA-TCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCGGAACA--ATATCCAG-------------------------------------------------------------------AAGTT--GT..............................2611.001000010
..............................TT-CCCGAACATTTTCCTGTCAGAC-G-A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........................................................................................................................................................................................................................................CGCAT-CAAAA--------TTT-CTGGT.........................................................................................................................................................................................................................................................................................................................................................1811.001010000
..................AA----------TT-CCCGAACATTTTCCTGTCAGAC-G-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
................................................................................................................................................................................................................................................................................................TT---GTTATGAAAACGTCTC-TCTCGCC..................................................................................................................................................................................................................................................................................................2511.001010000
droBip1
GTA----AATTAAGACGAAA----------TT-CCCGAACATTTTCCTGTCAGAC-G-AG-------A------CAGCAATGTAAGTAGAATCTATTCCT-----------CGCCAAAGGGGAACTTGGAAACAAAACCTACAGCAA-------C--TAC-TAA--CG--A--AAAACCA-----------------AATC-----------------------GAAAATGTTGCGCAT-CAAAA--------TTT-CTGGTTACTAACT------------------TT---GTTATGAAAACGTCTC-TCTCGCCGCCGCCTCCTTGAACCGAACCGAATAAAACCACCCACCGAAACTGG---GGCAACAAAAGA--AGCGC---------------------------------------------------------------------------------ACAGCA-----TTCGCTGCGGAACA--ATACCCAG-------------------------------------------------------------------AAGTT--GTGG-----------------------AA-TCSizeHit CountTotal NormTotal
No Reads
dp5
-TA----AATTTATACAGAA----------TT-TGCGAATATTTTCCTGTCATT--AAA---------------GAACAATGTAAGTAGACA----------------------------------------------------C---------AAACAC-ACG------C--ACAAGACAGGAGCAACGAACTCGCATTG-----------------------CAAAATGTTGCACAA-CCAAA--------ATT-CCATGTCCTAA-T------------------TT---GTTCTGAAAACGTCTC-TCTCACCGCCTCCTCAAA--AC------------------------------------------------------------------------------------------T----GA-ACAAAAAA-----------------------------------------------------------------------------------------AACATCGATTGCTGGTAAATACACCAAGAAGAGGCC-----CAGACCC------------------CCCGAGCGAAC-CCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........ATTTATACAGAA----------TT-TGCGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000011000
...........................................................................................................................................................................................ACGAACTCGCATTG-----------------------CAAAAT.........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
.............................................................................CAATGTAAGTAGACA----------------------------------------------------C---------AAACAC-AC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...............................................................................................................................................................C-ACG------C--ACAAGACAGGAGCAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................TGTCCTAA-T------------------TT---GTTCTGAAAA................................................................................................................................................................................................................................................................................................................2111.0010000000010
...................A----------TT-TGCGAATATTTTCCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
.........................................................AA---------------GAACAATGTAAGTAGACA----------------------------------------------------C---------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
droPer2
-TA----AATTTATACAGAA----------TT-TGCGATTATTTTCCTGTCATT--AAA---------------GAACAATGTAAGTAGACA----------------------------------------------------C---------AAACAC-ACG------C--ACAAGACAGGAGCAACGAACTCGCATTG-----------------------CAAAATGTTGCACAA-CCAAA--------ATT-CCATGTCCTAA-T------------------TT---GTTCTGAAAACGTCTC-TCTCACCGCCTCCTCAAA--AC------------------------------------------------------------------------------------------T----GA-ACAAAAAA-----------------------------------------------------------------------------------------AACATCGATTGCTGTTAAATCCCCCAAGAAGAGGCC-----CAGACCC------------------CCCGAGCGAAC-CCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................A----------TT-TGCGATTATTTTCCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................ACAAGACAGGAGCAACGAACTC............................................................................................................................................................................................................................................................................................................................................................................................................................2221.002200000
...................A----------TT-TGCGATTATTTTCCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
GAA----AAATT-CATAAAT----------CTAGACGAAGTTTTCCTTGTCAATT-G-TGTAAAAGGAAAACATTAATATTGTAAGT-------ATTACATAAACAGT-TA----------------------------CGCA-CAC--AC---A--CTC---A--CACCTACAACACAC-----------------AGCG-----------------------CAAAATGTTGCAAGAACCAAA--------ATT-CCAAATGCTAA-TTGTTTTCGTATAATTTTTCTTTCCCAAAAAAAACGTCTC-TCTCAACGCCTCC---CAG------------------------------------------------------------------------------------------------------AGAA-AAAAGTTGAATAAGAT-CTAAAAAAAAACAAAAAACAAACGCCTGCTGC------TTGTTGCCAA-A--------------------------------------------------AGA--CGACGAGGAAGAGAAAGAAGAACAGCTGCATCCCCCCATAACACAA-TCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................AAT----------CTAGACGAAGTTTTCCTTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200110
.......AAATT-CATAAAT----------CTAGACGAAGTTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGC------TTGTTGCCAA-A--------------------------------------------------AGA--CGACG............................................2511.00100001
..........TT-CATAAAT----------CTAGACGAAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...............................................................................................................................................................C---A--CACCTACAACACAC-----------------AGCG-----------------------...............................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAA-A--------------------------------------------------AGA--CGACGAGGA........................................1911.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAAGAT-CTAAAAAAAAACA.............................................................................................................................................2211.00101000
...............................................TGTCAATT-G-TGTAAAAGGAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
................................................GTCAATT-G-TGTAAAAGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..................AT----------CTAGACGAAGTTTTCCTTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..........TT-CATAAAT----------CTAGACGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAAAGTTGAATAAGAT-CT........................................................................................................................................................1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGAACAGCTGCATCCCCCC............2211.00101000
...............................TAGACGAAGTTTTCCTTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..........................................TTCCTTGTCAATT-G-TGTAAAAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
droVir3
TAA----AATTAACACGGAA----------TA-TACGGAAGTTTTTCTGTCAGTT-CT-----------------AAAAATGTAAGTAGCACAAAATTAACAAAAAGT-----------------------------------------------------------------------------------------------TCCTCGACGCAACA-AACAGCAAATATGTTGTGCAA-TCTCTACTT--AAATTACCAGTGATTTA-T-----------AA-----CT---GTTATGAAAACGTCTC-TCTCCCAA-CGCCACCCAT-------------AACA-----T-------CTGGCCGTGTCCCA---GCCTAGC-----GCCGCAGCCACACCCCCTGCAGCCG-----------------------------------------------------------------------C------CTGTAGCCCGACG-TGTC-GAAGTGGACACCGGATCAACAACG-TTG------------------------------CAGTTAAA------------------------------GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GAAGTGGACACCGGATCAACAACG-TT......................................................................2711.001000000000001000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................A-T-----------AA-----CT---GTTATGAAAACGTCT...........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...........................................TTTCTGTCAGTT-CT-----------------AAAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGACACCGGATCAA..............................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................AAAAAGT-----------------------------------------------------------------------------------------------TCCTCGACGCAACA-.....................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TT--AAATTACCAGTGATTTA-T-----------AA-----C..............................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
..............ACGGAA----------TA-TACGGAAGTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
.............CACGGAA----------TA-TACGGAAGTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGGACACCGGATCAACAACG-TT......................................................................2611.001000000000100000000000000000000000000000000000000000000000000000
............ACACGGAA----------TA-TACGGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCGACG-TGTC-GAAGTGGACACCGGA..................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.AA----AATTAACACGGAA----------TA-TAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCCTAGC-----GCCGCAGCCACACC.............................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................T--AAATTACCAGTGATTTA-T-----------AA-----...............................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AACA-AACAGCAAATATGT.......................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000100000000000000000000000
droMoj3
AGA----ATTTA-CACGGCATATACGAAT-CTATACGGAAGCATTTCTGTCAGTT-C-----------------GAAAAATGTAAGTAACACAAAATTAACAAAATC------------------------------------------------------------------------------------------------TCCACGACACATTAAAATAGCAAACATGTTGTGCAA-TCTGAACTT--AAATTACCAGTGATTTA-T-----------AA-----CT---GTTATGAAAACGTCTCCTCTCCCAAACGCCCAACG--CC---------TAACAAAATCC-------CTGGCCGTGCCCCAATAGC--AGTGTCCCGCAGCAGT---------CGCAGCCGCCCCCCATCCC-----------------------------------------------------------------------AGTCGGACG-AGGG-CAAATAC------------------------------------------ATACGAGAGAGGAGCCAAAG----------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC------------------------------------------ATACGAGAGAGGAGCCA...............................2011.001000001
.........................GAAT-CTATACGGAAGCATTTCTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...........A-CACGGCATATACGAAT-CTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................AAACGTCTCCTCTCCCAAAC...............................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................T-----------AA-----CT---GTTATGAAAACGTCTCC.........................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TCCC-----------------------------------------------------------------------AGTCGGACG-AGGG-CAAATAC------------------------------------------................................................2411.001100000
..............ACGGCATATACGAAT-CTATACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
TCATCAATACTCATACGGAT----------TG-AACAAAAGCTTTGCTGTCACTT-T-----------------AAAAAATGTAAGTAC-------TCCAAATACATAAGA----------------------------AGAAAAAC-------AAACAC---A--CA--C--GAAACAC-----------------GAAAATTCCTCGATGCAACA-AACAGCAAAAATGTTGTGCAA-TCTGAACATCAAAATTGCCAGTGATTTG-T-----------AAATTTTGT---GTTATGAAAA-ATCTC-TCTCTCAAAAT--TTATA--T----------------------------TTGGCTGTGT-----AAGC--AGC-----GCAGCAGC--------------------------C----GG-GC----------------------------------AAGAAA-----AGCGATTCGAGGT-----TGAC--------T---------------------------------------------------CCA-ACGATTAGTAGAG-----------------------------AGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............TACGGAT----------TG-AACAAAAGCTTTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101

Generated: 05/19/2015 at 01:24 AM