ID:

dsi_15725

 Coordinate:

x:71546-71695 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.3 -16.3 -16.3

Flybase annnotation

five_prime_UTR [x_71696_71701_+]; CDS [x_71702_72836_+]; exon [x_71696_72836_+]; intron [x_62695_71695_+]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
AT_richLow_complexityLow_complexity+
DNAREP1_DMRCHelitron+
mature
  1. 2l:3846760-3846784 +
  2. 2l:21811139-21811163 -
  3. 2r:149682-149706 +
  4. 2r:682747-682771 +
  5. 2r:1372204-1372228 +
  6. 2r:1423442-1423466 -
  7. 2r:2558501-2558525 +
  8. 2r:12709876-12709900 +
  9. 2r:15044807-15044831 +
  10. 3l:22582146-22582170 -
  11. 3l:23259993-23260017 +
  12. dsi_17893  4:195460-195484 -
  13. dsi_15725  x:71633-71657 +
  14. x:108424-108448 +
  15. x:115353-115377 -
  16. x:3709253-3709277 +
  17. dsi_31968  x:16629445-16629469 +
  18. x:18875705-18875729 +
  19. dsi_19708  x:20420002-20420026 +
  20. node_34822:3824-3848 -
star

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCCGTCTGTATGAACGTCGGGATCTGTGGAACTAAAAAAGCTTTAATGTTGAGAATAAAATGATAATTAAAATTATTTGTTTATTTAATATTCATATCATTTATATTAGTTACGGTTATCTGATAGTCGTTAAACTAGACTATAGCATTCTCTCTTGTTTTTTATAGATCCGTTTAAGCCCAACATTTTTCATTTTACAGATCGCAATGCAGTCAACCCAAAGTAAAGGTGATCGATCTTCGATGCACAG
**************************************************.....((((((((.....(((((.....(((((.(((((((...........)))))))..((((..(((((((((((.........))))))((((........)))).....))))))))).))))).....)))))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 M053
female body
 M025
embryo
 SRR902008
ovaries
.................CGGGATCTGTGGAACTAAAAAAGC................................................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
........................TGTGGAACTAAAAAAGCTTTAATGT......................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................TAAACTAGACTCAAGAATTCTC.................................................................................................. 22 3 2 1.00 2 0 0 0 2 0 0 0 0 0
.........................GTGGAACTAAAAAAGCTTTAATGT......................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................GTGGAACTAAAAAAGCTTTAATGTTGA...................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TTTTTCATTTTACAGATCGCAATGCAGTC.................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................CGGGATCTGTGGAACTAAAAAAGCTT............................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................CGGGATCTGTGGAACTAAAAAAAGC................................................................................................................................................................................................................ 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................ATCTGTGGAACTAAAAAAGC................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................TCATTTATGTTAGTTA.......................................................................................................................................... 16 1 20 0.90 18 6 0 10 2 0 0 0 0 0
.................CAGGATCTGTGGAACTATAAAAGC................................................................................................................................................................................................................. 24 2 4 0.75 3 0 0 3 0 0 0 0 0 0
.......................................................................................................................................................................GTCCGTTTAAGCCCACCA................................................................. 18 2 4 0.50 2 0 0 0 0 2 0 0 0 0
.............................................................................................................................................................................................................................AGTAAGGGTGATTGATCT........... 18 2 2 0.50 1 0 0 0 0 0 1 0 0 0
...................................................................TAAAATTATTTGTTTGTGTA................................................................................................................................................................... 20 2 7 0.29 2 0 0 0 0 2 0 0 0 0
.........................................................................................................TTAGTAACGGATATCTGATAGTCGTT....................................................................................................................... 26 2 5 0.20 1 1 0 0 0 0 0 0 0 0
.................CAGGATCTGTGGAACTATAAAAG.................................................................................................................................................................................................................. 23 2 5 0.20 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................TAGACTAGAGCATTCTCT................................................................................................. 18 1 5 0.20 1 0 1 0 0 0 0 0 0 0
...............................................................................................ATCATTTATGTTAGTTA.......................................................................................................................................... 17 1 13 0.15 2 0 0 1 1 0 0 0 0 0
..................................................................................................................GTTATCTGATAGTCGTA....................................................................................................................... 17 1 7 0.14 1 0 1 0 0 0 0 0 0 0
.........................................................................TATTTGTATATTTATTAGTCATA.......................................................................................................................................................... 23 3 8 0.13 1 0 0 0 1 0 0 0 0 0
...............................................................................................ATCATTTATGTTAGTTAC......................................................................................................................................... 18 1 12 0.08 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................AAACTAGACTCAAGAATTCTC.................................................................................................. 21 3 12 0.08 1 0 0 0 1 0 0 0 0 0
...............................................................................................AGCATTTATATTAGTTA.......................................................................................................................................... 17 1 19 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................TACGGTTGTCTGACAGAC.......................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................CGTTTATTTGATAGTCCTT....................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................GACTATAGCATTCTCTCTTGTTTTT........................................................................................ 25 0 20 0.05 1 0 0 0 0 0 0 0 0 1
................................................................................................GCATTTATATTAGTTA.......................................................................................................................................... 16 1 20 0.05 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................GCATTCTCTCTTGTTTT......................................................................................... 17 0 20 0.05 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................TATAGCATTCTCTCTTG............................................................................................. 17 0 20 0.05 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................TATAGCATTCTCTCTTGTT........................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................TTCGTTTAAGCCCACCA................................................................. 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

AGGCAGACATACTTGCAGCCCTAGACACCTTGATTTTTTCGAAATTACAACTCTTATTTTACTATTAATTTTAATAAACAAATAAATTATAAGTATAGTAAATATAATCAATGCCAATAGACTATCAGCAATTTGATCTGATATCGTAAGAGAGAACAAAAAATATCTAGGCAAATTCGGGTTGTAAAAAGTAAAATGTCTAGCGTTACGTCAGTTGGGTTTCATTTCCACTAGCTAGAAGCTACGTGTC
**************************************************.....((((((((.....(((((.....(((((.(((((((...........)))))))..((((..(((((((((((.........))))))((((........)))).....))))))))).))))).....)))))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 O002
Head
 M023
head
 SRR553487
NRT_0-2 hours eggs
...........CTAGCAGCCCTTGACATCTTGA......................................................................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0
......................AGACACCTTGATTTTTTCGAAATT............................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0
...........CTTGCAGCCCTAGACACCTTGATT....................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................TGATTTTTTCGAAATTACAACTCT.................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................AAAATATCTAGGCAAATTCGGGTTGT................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0
.............TGCAGCCCTAGACACCTTGATTTTTT................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0
.........TACTTGCAGCCCTAG.................................................................................................................................................................................................................................. 15 0 6 0.17 1 1 0 0 0 0 0 0 0
.................................................................TTATTTTAATAAACAAACACAT................................................................................................................................................................... 22 3 17 0.12 2 0 0 0 0 0 2 0 0
........................................................................................................................ACTATCCGCAATGTGATGT............................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 1 0
..............................................................................................................................AGCAATTAGATCTGGTA........................................................................................................... 17 2 12 0.08 1 0 1 0 0 0 0 0 0
........................................................................................................................ACTATCGGCAATGTGATGT............................................................................................................... 19 3 18 0.06 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................AAAAAATATCTAGACAAATCT........................................................................ 21 3 19 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:71496-71745 + dsi_15725 TCCGTCTGTATGAACGTCGGG----------------------------ATCTG-TGGAACTA----AAAAAGCTTTAATGTTGAGA--A---------------------------------------------------------------------------TAAAATGATAATTAAAATTATTTGTTTA----------------------------TTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------ATTC--ATATCATTTAT------------------------------------ATTAG--TTACGGTTATCTGATAGTCGT-TAAACTAGACTATAGCATTCTCTCTTGTTTTT-------------------------------------------------------------------------------------------------TATAGATCCGTTTAAGCC------CAAC-ATTTTTCA--------------------------TTTTACAGATCGCAATGC---A-------------GTCAACCCA-------AAGTAAAGGTGATCGATCTTCGATGCACAG
droSec2 scaffold_108:70518-70766 + TCCGTCTGTATGAACGTCGGG----------------------------ATCTG-TG-AACTA----AAAAAGCTTTAATGTTGAGA--A---------------------------------------------------------------------------TAAAATGATAATTAAAATTATTTGTTTA----------------------------TTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------ATTC--ATATCATTTAT------------------------------------ATGAG--TTACGGGTATCTGATAGTCGT-GAAACTAGACTATAGCATTCTCTCTTGTTTTT-------------------------------------------------------------------------------------------------TATAGATCCGTTTAAGCC------CAAC-ATTTTTCA--------------------------TTTTACAGATCGCAATGC---A-------------GTCAACCCA-------AAGTAAAGGTGATCGATCTTCGATGCACAG
dm3 chr3R:670119-670344 + TCCGTCCGTATGGACGTCCAG----------------------------ACCTC-AGGAACTA----TAAAAGTTAGAAAGTTGAGTTT--A----------------------------------GACATGCAGATTC---------------C-------------------------------------------------------------------------------------------------AGAGACATCTTTTTCTTTCATTTTATAATTTTTTTTTTCAAATTTATATT---------------------------------------------GGTA-------------------------------------------------------------------------------------------------------------------------------AGG------------------------------------CTGTG--CAATGTGTATGCAATAGTCGA-GGAACTTAACTATAGCATTACCACTTGTTTTT-------------------------------------------------------------------------------------------------AAAT-----ATTTAAACG------CGA----TTTTAA--------------------------TTTT------------------------------CGATAGGTTA-------C--------------------------AGT
droEre2 scaffold_4929:20826687-20826907 - GTA-------CGAAAGCGGTG----------------------------CTTTA--------------------TTC----------------------------------------------------------------------------------------------------------TATGCGGAATATG-CTGATATTACAGAACATTTTGAAATTTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------------------------------------AT--ACTTCCACTAG------------------------------------CTGAG--TAACAGGTATCTGATAGTCGT-GGAACTCGACTATAGCATTCTATCTAGATTTAT--------------------------T-----------------------------------------------------------------------TA------TTTGGGGC------GCAC-ATTTTTCCTCACGGTTCGTTTTTCATTATATTCACTCAAT---------------------------------------------AAGTAAA-ATTAACAATATTAGGAAGTAAG
droYak3 2L:20997516-20997763 - TCCGTCCGTATGAACGTCGAG----------------------------ATCTC-GGGAACTA----TAAAAGCTTGAAGGTTGAGATT--A----------------------------------AGCATACAGATTC---------------TAGATTCT----G--TTGTCA------------TGCT--AGTT---------------CT--------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------TCAA---AATGACAGAA----------------------------------------------AATTCCACCAG------------------------------------CTTAG--TAACGAGTATATGTTAGTCTT-AGAACTCGACTATAGAATTGTTTTGTTATTTT-------------------------------------------------------------------------------------------------TTTAC------------------------ATTATTCA--------------------------ATATATAAATCTAGGTGCCAGG-------------ATTGGCCTA-------CAGTGTTGGTG-----TTTTCAGTCCGCAG
droEug1 scf7180000408537:3335-3538 - TCTGTCCGTATTAACGCTGAG----------------------------ATCTC-AGGAACTG----TAGGTACGTCA----------------------------------------------------------------------------------------C--TCAACA------------TGCT--ATCT---------------CT--------------------------------------G----------------------------------------------------------------------------------------------------------------------------------------------------------ACA---------------ACAGGTGGCGCGTTGTGAATATCCACTAGCAAAATTAATATTTTAAAATTGTGTAT------------------------------------AACAG--TAACGGGTATCTTATAGTCGC-GGCACTTGACTATAGCGTTTCTTCCTAATTTAT--------------------------T----------------------------------------------------------------------TTACGTC--TTTATACC------CGGC-----------------------------------------------------------------------------------------------------------------ACT
droBia1 scf7180000301291:20005-20247 + TCCGTCTGTCTGTCCGTTCATCAGT------------------------ATCGA-TAAATCTA----GATTCGATCT----------------------------------------------------------------------------------------------------------TATTTGGACTGTT--------------------------ATTAAATTTAAGTGAAATTATACCAATATTTTAAACACTAATGTCCAATGTGATTGAATTATCCTTCACATATTATTGTTATTCGTGCTTCATAATAACTTTTCACTCAAAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCG-------------------------------------------------------------------------------------------------------------------------------------------AA--------------------------TTTTAA---------AAT---ACTTCATCATCGTCGAGATATTA-------AAGAAAAGGTGAA-GGCCTTTGACGGACAG
droTak1 scf7180000410359:4702-4926 + GTGT-T--TATGAATACC----------------------------------TA-TCGAAATG-------------TAGAAG--------A-------AATTTTTTAAAT--------------------CGGACCATTCGTT-AAAAAGTTACGGCGGATCAAA-G--TTTTTA------------TCTTCA----------------------------TCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------TCGC--TCTCCCTTTAG------------------------------------CTGAA--TAACGGGTATCTGATAGTCCG-GGCACCCGACTATAGCGTTCTCTCTTGTTTTAG--------------------------T-----------------------------------------------------------------------TGATTTCATTTAC------------T-ACTTTTCA--------------------------T--------------------A-------------GTTAAATCA-------AATAAAAAATCATTGATT----------TT
droEle1 scf7180000491199:1685643-1685885 + TA-GCTTGTATGAACGTCGAG----------------------------ATCTC-GGAAACTA----TAAAAGCTAGAGATTTGG--------------------------------TGGATTTGGGAGATTTAGGATT------------TG-CAGGTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTAAATTTCAAAA-------------------CGGGG--TCACGCCCACTCTAATGTCGG-GAAACTCGACTATAGCGTTCTTTCTTTTTTTAT--------------------------TATTACCTTTG------------------------------------------------------------ATAAA-AAGTTTAATCT------TAACTATCTTGAA--------------------------CTCTATAGACTTCATCTA---A---------A---GCCAAAAGAAAATTTAAAACAAAGG-------------------TG
droRho1 scf7180000779303:40307-40504 - AACATTTAGACTTTAATATACATAAT--------ACTATTTAATACTTAATCTT-ATATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTGTTTAG------------------------------------CTGAG--TAACGGGTATCTAATAGTCGA-GGCACTCGACTATAGCGTTCTCTCTTGTTTTAG-------------------------------------------------------------------------------------------------ACTTATTTGTATTAACA---GAATTAT-ATTTTTTC--------------------------TTTTCACAATCATATTTA---A-------------G---ACCTT-------AAATGGAAATGGTTATTC----------TT
droFic1 scf7180000453851:677411-677565 + TTCAATGT--------------------------------------------------------------------------GCAAA--T---------------------------------------------------------------------------TATAGTGATAAATACGAATGCGGA-------------------------------------------TCAAGTAA---------------------------------------------------------------------CTATAAA----------------------------------------------------------------------------------------------------------AAAGTTGCCTCGT-CT--------------------------ATTA--ATAATGTTAAT------------------------------------CTGAG--TAACGGGTATCTGACAGTCG--GGCACTCGACTTTAGCGTTCTCTGTTGTTATAT--------------------------C---------------------------------------------------------------------TATAGATACTT-----------------------------------------------------------------------------------------------------------------------------------TT
droKik1 scf7180000302752:81055-81184 + TCCGTCTGTCCGTCTGTCTAG----------------------------GCCAC-A---TCTA----AAAAA---------TGGTGC--A---------------------------------------------------------------------------AA----------------------------------------------------------AATGTTGATAAACAG---------------------------------------------------------------------CAAAGTTATAATTTTTTTCTCAAAATGTATCGAACATTTGTATGGCAGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGATATAGTCGT-CCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT
droAna3 scaffold_13230:1399803-1400010 - TCCGTCTGTCTGTCTGTCGGT----------------------------TTCTA-CGCAA--------ACTAGTCTCTCAGTTATAA--A---------------------------------------------------------------------------AAAATATATATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTGCTTGGGGTACGAACTTTATTCGCATTCTTTATTCTTTATTCGCACTTTTTATATGCTCTTTTTAGCTTTCCATATACCATTTAAACAAGAAAATATCATCATTGATTTTTATACATACGTTAATACG------TATG-ATTT------------------------------------------------------------------------------------------------------------TTC
droBip1 scf7180000395322:4001-4208 + TCCGTCTTTCCGTCCGTCCGTATGTC--------CGTATGAACTCGTTGATCTG-AGATTATACTCCTGACTGGTATAGAGT--------A-------T-------------------AGGATTT-GGCACGGAGAATCCTGCAACAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------GGAA-------------------------------------------------------------------------------------------------------------------------------ATC------------------------------------CTG--------------GAAATAGTCGG-GAAACTCGACCATAGCCGCCTTTTCTCGTATTT------------------------ATT-----------------------------------------------------------------------TTAATCCTTTTAATAT------TAGT-ATT-TGTA--------------------------TTTCAGCAACCAGA----------------------------------------------------------------ATG
dp5 3:11459971-11460145 + TCCGTCCGTACGTTCGTGTAAAGAA--------------------------AAA-TGGAAACA----GATCAAATCTAATACA-------------------------------------------------------------TCAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATCTACCA-----------AA----CGGTTCGTCCGAATTTTTCAGAATTTAGATTATTTTAAATAAATA---------------------------------------------------------------------------AAG------------------------------------TAGAG--CCGCGGGA-----------AA-G-ACAGCGGCTACAACGTTCCCCCACGTTTTT-------------------------------------------------------------------------------------------------CATTAATC---------------------------------------------------------------------------------------------------------------------------------------C
droPer2 scaffold_656:4289-4523 - TCCGCCCCCACAAAGGACGAA----------------------------AATCTGTGGCA-T-----------------------------------CCACATTTTTAAAGATACGATAAAACTA-AGAACGCAGAATC-------------G-TAGAGGA----TG--ACTATATGTAAAACTATATGACTATAT--------------------------GTAAAATTTCAACCAGATCA---------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTA-------------------------------------------------------------------TTAT--------------------------------A--------------G--CCA-----------GAATCAA-G----AAAACAATTTCATTCTTTCTCGCTCTGT--------------------------C-----------------------------------------------------------------------TC------TTTCTAAC------ACAC-AGGTTTCAT---GGTCAG----------------TTTTGCTAATTGCAAAAT------------------------------------------------------------AGT
droWil2 scf2_1100000004963:215296-215483 + TCCGTCCGTCCATCCGTTAAT----------------------------ATTGG-TGAGTTTA----TTACACCTATAAACTTCTGT--G---------------------------------------------------------------------------CC----------------------------------------------------------AAATTTGATCAAGAT---------------------------------------------------------------------CG-----------------------------------------GGTGACTATATC------------------------------ATATAGCTCCCATAGGAACGATTGGACGAAAGCTGTGACTT-TT--------------------------GTCA--ATAACTTCAAT-----------------------------------------------------------------TACTTTTGACGCGATTG------------------------------------------------------------------------------------------------------------------------CTTTTAAATT------CAAC-ATTTATTG--------------------------------------------------------------------------------------------GT----------TTA
droVir3 scaffold_12875:9709839-9710053 - TCTGATCGTCTGTCCGACCATCCGTA--------TCTATGAACGAATCAATCTA---------------AGAACTAGAGAATTGAGACC--T----------------------------------TGAATATTGGTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTATTCCTAGTAAATCTTTAAGGTTTTAGAAGCTAGACTCACGAAATTTGACATGTATCTTCTAGTT-------------------------------------------------------------------------------------------------------------------------------------------AAGTATAAACA---GATCAAGTATCTTTCA--------------------------TTTTATATATGTTGTT-------------------GCTAAAAGA-------AAGTAAAGG------GT----------ATC
droMoj3 scaffold_6473:9978640-9978900 - TCCGTCTGTCTGTCTGTTCGTCCGTCTGTCCGTATGTATGAACGCGTCGACTTC-AGAAGATA----TAAGAGCTAGAGACT---------TTGTATTTATTTTTTAAATAATCTTACTAAGCTT-TTGCC-------------ACAAATTTA-------------------------------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------------------GATACAG----TTGTTTGCTTTGGTTTTTCAA--CTGA----------G--------------------------------------------------------------------ATTA--TTATA-------------------------------------------------------GTTTTCTCTAGTTAG-GGATTT------TCAGTTTTTTTCTTTCTTTAT--------------------------T-----------------------------------------------------------------------TT------TTTTTTC--------------TTTGCA--------------------------GTTTACTGTGCATAATGT---A-------------GCCAAAACG-------T--------------------------AGT
droGri2 scaffold_274:857-1082 + TCCGTCTGTATGAACAAATGG----------------------------ATCTC-ACATACCA----TTAAAGCTATAGACA-AATAT---T----------------------------------GGAATATAAGTTC--------------CCGTATACC----A--TATGCA------------TATT--A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCATTCAA---TTTGATCGATAGCTGCCCCC---------------------------------------------AT------------------------------------CTGGT--GAATA--TCCATACTCATCGAGCACACTCGACTAGATCATTCTTATTTGTTTTGT-------------------------------------------------------------------------------------------------GTGCAGCGATATATGCCCGGTGAATAC-ATTCTTAA--------------------------TTTGAAGA----------------------------------------------------------------------ATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCCGTCTGTATGAACGTCGGG----------------------------ATCTG-TGGAACTA----AAAAAGCTTTAATGTTGAGA--A---------------------------------------------------------------------------TAAAATGATAATTAAAATTATTTGTTTA----------------------------TTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------ATTC--ATATCATTTAT------------------------------------ATTAG--TTACGGTTATCTGATAGTCGT-TAAACTAGACTATAGCATTCTCTCTTGTTTTT-------------------------------------------------------------------------------------------------TATAGATCCGTTTAAGCC------CAAC-ATTTTTCA--------------------------TTTTACAGATCGCAATGC---A-------------GTCAACCCA-------AAGTAAAGGTGATCGATCTTCGATGCACAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................CGGG----------------------------ATCTG-TGGAACTA----AAAAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000020000000000
....................................................TG-TGGAACTA----AAAAAGCTTTAATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.....................................................G-TGGAACTA----AAAAAGCTTTAATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.....................................................G-TGGAACTA----AAAAAGCTTTAATGTTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCA--------------------------TTTTACAGATCGCAATGC---A-------------GTC...........................................2911.00100000010000000000
.................CGGG----------------------------ATCTG-TGGAACTA----AAAAAGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.................CGGG----------------------------ATCTG-TGGAACTA----AAAAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.................................................ATCTG-TGGAACTA----AAAAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATCTGATAGTCGT-A................................................................................................................................................................................................................................................................................1770.14100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTATAGCATTCTCTCTTGTTTTT-------------------------------------------------------------------------------------------------................................................................................................................................................25200.05100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCTCTCTTGTTTT..................................................................................................................................................................................................................................................17200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCATTCTCTCTTG......................................................................................................................................................................................................................................................17200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCATTCTCTCTTGTT....................................................................................................................................................................................................................................................19200.05100100000000000000
droSec2
TCCGTCTGTATGAACGTCGGG----------------------------ATCTG-TG-AACTA----AAAAAGCTTTAATGTTGAGA--A---------------------------------------------------------------------------TAAAATGATAATTAAAATTATTTGTTTA----------------------------TTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------ATTC--ATATCATTTAT------------------------------------ATGAG--TTACGGGTATCTGATAGTCGT-GAAACTAGACTATAGCATTCTCTCTTGTTTTT-------------------------------------------------------------------------------------------------TATAGATCCGTTTAAGCC------CAAC-ATTTTTCA--------------------------TTTTACAGATCGCAATGC---A-------------GTCAACCCA-------AAGTAAAGGTGATCGATCTTCGATGCACAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAT------------------------------------ATGAG--TTACGGGT...............................................................................................................................................................................................................................................................................................1911.0010010
dm3
TCCGTCCGTATGGACGTCCAG----------------------------ACCTC-AGGAACTA----TAAAAGTTAGAAAGTTGAGTTT--A----------------------------------GACATGCAGATTC---------------C-------------------------------------------------------------------------------------------------AGAGACATCTTTTTCTTTCATTTTATAATTTTTTTTTTCAAATTTATATT---------------------------------------------GGTA-------------------------------------------------------------------------------------------------------------------------------AGG------------------------------------CTGTG--CAATGTGTATGCAATAGTCGA-GGAACTTAACTATAGCATTACCACTTGTTTTT-------------------------------------------------------------------------------------------------AAAT-----ATTTAAACG------CGA----TTTTAA--------------------------TTTT------------------------------CGATAGGTTA-------C--------------------------AGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAATAGTCGA-GGAACTTAACTA.....................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TC-AGGAACTA----TAAAAGTTAGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TC-AGGAACTA----TAAAAGTTAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TTTTATAATTTTTTTTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18140.2130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................AACTA----TAAAAGTTAGAAAGTTGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTA-------CGAAAGCGGTG----------------------------CTTTA--------------------TTC----------------------------------------------------------------------------------------------------------TATGCGGAATATG-CTGATATTACAGAACATTTTGAAATTTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------------------------------------AT--ACTTCCACTAG------------------------------------CTGAG--TAACAGGTATCTGATAGTCGT-GGAACTCGACTATAGCATTCTATCTAGATTTAT--------------------------T-----------------------------------------------------------------------TA------TTTGGGGC------GCAC-ATTTTTCCTCACGGTTCGTTTTTCATTATATTCACTCAAT---------------------------------------------AAGTAAA-ATTAACAATATTAGGAAGTAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGT-GGAACTC..........................................................................................................................................................................................................................................................................21190.0510100000
droYak3
TCCGTCCGTATGAACGTCGAG----------------------------ATCTC-GGGAACTA----TAAAAGCTTGAAGGTTGAGATT--A----------------------------------AGCATACAGATTC---------------TAGATTCT----G--TTGTCA------------TGCT--AGTT---------------CT--------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------TCAA---AATGACAGAA----------------------------------------------AATTCCACCAG------------------------------------CTTAG--TAACGAGTATATGTTAGTCTT-AGAACTCGACTATAGAATTGTTTTGTTATTTT-------------------------------------------------------------------------------------------------TTTAC------------------------ATTATTCA--------------------------ATATATAAATCTAGGTGCCAGG-------------ATTGGCCTA-------CAGTGTTGGTG-----TTTTCAGTCCGCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................AG----------------------------ATCTC-GGGAACTA----TAAAAGCTTGAAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000000002
.....CCGTATGAACGTCGAG----------------------------ATCTC-GGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.08101000000000
TCCGTCCGTATGAACGTCGAG----------------------------ATCTC-G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27130.08101000000000
....TCCGTATGAACGTCGAG----------------------------ATCTC-GG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24180.06101000000000
...GTCCGTATGAACGTCGAG----------------------------ATCTC-GG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25180.06101000000000
droEug1
TCTGTCCGTATTAACGCTGAG----------------------------ATCTC-AGGAACTG----TAGGTACGTCA----------------------------------------------------------------------------------------C--TCAACA------------TGCT--ATCT---------------CT--------------------------------------G----------------------------------------------------------------------------------------------------------------------------------------------------------ACA---------------ACAGGTGGCGCGTTGTGAATATCCACTAGCAAAATTAATATTTTAAAATTGTGTAT------------------------------------AACAG--TAACGGGTATCTTATAGTCGC-GGCACTTGACTATAGCGTTTCTTCCTAATTTAT--------------------------T----------------------------------------------------------------------TTACGTC--TTTATACC------CGGC-----------------------------------------------------------------------------------------------------------------ACTSizeHit CountTotal NormTotal
No Reads
droBia1
TCCGTCTGTCTGTCCGTTCATCAGT------------------------ATCGA-TAAATCTA----GATTCGATCT----------------------------------------------------------------------------------------------------------TATTTGGACTGTT--------------------------ATTAAATTTAAGTGAAATTATACCAATATTTTAAACACTAATGTCCAATGTGATTGAATTATCCTTCACATATTATTGTTATTCGTGCTTCATAATAACTTTTCACTCAAAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCG-------------------------------------------------------------------------------------------------------------------------------------------AA--------------------------TTTTAA---------AAT---ACTTCATCATCGTCGAGATATTA-------AAGAAAAGGTGAA-GGCCTTTGACGGACAGSizeHit CountTotal NormTotal
No Reads
droTak1
GTGT-T--TATGAATACC----------------------------------TA-TCGAAATG-------------TAGAAG--------A-------AATTTTTTAAAT--------------------CGGACCATTCGTT-AAAAAGTTACGGCGGATCAAA-G--TTTTTA------------TCTTCA----------------------------TCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------TCGC--TCTCCCTTTAG------------------------------------CTGAA--TAACGGGTATCTGATAGTCCG-GGCACCCGACTATAGCGTTCTCTCTTGTTTTAG--------------------------T-----------------------------------------------------------------------TGATTTCATTTAC------------T-ACTTTTCA--------------------------T--------------------A-------------GTTAAATCA-------AATAAAAAATCATTGATT----------TTSizeHit CountTotal NormTotal
No Reads
droEle1
TA-GCTTGTATGAACGTCGAG----------------------------ATCTC-GGAAACTA----TAAAAGCTAGAGATTTGG--------------------------------TGGATTTGGGAGATTTAGGATT------------TG-CAGGTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTAAATTTCAAAA-------------------CGGGG--TCACGCCCACTCTAATGTCGG-GAAACTCGACTATAGCGTTCTTTCTTTTTTTAT--------------------------TATTACCTTTG------------------------------------------------------------ATAAA-AAGTTTAATCT------TAACTATCTTGAA--------------------------CTCTATAGACTTCATCTA---A---------A---GCCAAAAGAAAATTTAAAACAAAGG-------------------TGSizeHit CountTotal NormTotal
No Reads
droRho1
AACATTTAGACTTTAATATACATAAT--------ACTATTTAATACTTAATCTT-ATATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTGTTTAG------------------------------------CTGAG--TAACGGGTATCTAATAGTCGA-GGCACTCGACTATAGCGTTCTCTCTTGTTTTAG-------------------------------------------------------------------------------------------------ACTTATTTGTATTAACA---GAATTAT-ATTTTTTC--------------------------TTTTCACAATCATATTTA---A-------------G---ACCTT-------AAATGGAAATGGTTATTC----------TTSizeHit CountTotal NormTotal
No Reads
droFic1
TTCAATGT--------------------------------------------------------------------------GCAAA--T---------------------------------------------------------------------------TATAGTGATAAATACGAATGCGGA-------------------------------------------TCAAGTAA---------------------------------------------------------------------CTATAAA----------------------------------------------------------------------------------------------------------AAAGTTGCCTCGT-CT--------------------------ATTA--ATAATGTTAAT------------------------------------CTGAG--TAACGGGTATCTGACAGTCG--GGCACTCGACTTTAGCGTTCTCTGTTGTTATAT--------------------------C---------------------------------------------------------------------TATAGATACTT-----------------------------------------------------------------------------------------------------------------------------------TTSizeHit CountTotal NormTotal
No Reads
droKik1
TCCGTCTGTCCGTCTGTCTAG----------------------------GCCAC-A---TCTA----AAAAA---------TGGTGC--A---------------------------------------------------------------------------AA----------------------------------------------------------AATGTTGATAAACAG---------------------------------------------------------------------CAAAGTTATAATTTTTTTCTCAAAATGTATCGAACATTTGTATGGCAGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGATATAGTCGT-CCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotal
No Reads
droAna3
TCCGTCTGTCTGTCTGTCGGT----------------------------TTCTA-CGCAA--------ACTAGTCTCTCAGTTATAA--A---------------------------------------------------------------------------AAAATATATATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTGCTTGGGGTACGAACTTTATTCGCATTCTTTATTCTTTATTCGCACTTTTTATATGCTCTTTTTAGCTTTCCATATACCATTTAAACAAGAAAATATCATCATTGATTTTTATACATACGTTAATACG------TATG-ATTT------------------------------------------------------------------------------------------------------------TTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........TGTCTGTCGGT----------------------------TTCTA-CGCAA--------AC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
droBip1
TCCGTCTTTCCGTCCGTCCGTATGTC--------CGTATGAACTCGTTGATCTG-AGATTATACTCCTGACTGGTATAGAGT--------A-------T-------------------AGGATTT-GGCACGGAGAATCCTGCAACAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------GGAA-------------------------------------------------------------------------------------------------------------------------------ATC------------------------------------CTG--------------GAAATAGTCGG-GAAACTCGACCATAGCCGCCTTTTCTCGTATTT------------------------ATT-----------------------------------------------------------------------TTAATCCTTTTAATAT------TAGT-ATT-TGTA--------------------------TTTCAGCAACCAGA----------------------------------------------------------------ATGSizeHit CountTotal NormTotal
No Reads
dp5
TCCGTCCGTACGTTCGTGTAAAGAA--------------------------AAA-TGGAAACA----GATCAAATCTAATACA-------------------------------------------------------------TCAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATCTACCA-----------AA----CGGTTCGTCCGAATTTTTCAGAATTTAGATTATTTTAAATAAATA---------------------------------------------------------------------------AAG------------------------------------TAGAG--CCGCGGGA-----------AA-G-ACAGCGGCTACAACGTTCCCCCACGTTTTT-------------------------------------------------------------------------------------------------CATTAATC---------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TCCGCCCCCACAAAGGACGAA----------------------------AATCTGTGGCA-T-----------------------------------CCACATTTTTAAAGATACGATAAAACTA-AGAACGCAGAATC-------------G-TAGAGGA----TG--ACTATATGTAAAACTATATGACTATAT--------------------------GTAAAATTTCAACCAGATCA---------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTA-------------------------------------------------------------------TTAT--------------------------------A--------------G--CCA-----------GAATCAA-G----AAAACAATTTCATTCTTTCTCGCTCTGT--------------------------C-----------------------------------------------------------------------TC------TTTCTAAC------ACAC-AGGTTTCAT---GGTCAG----------------TTTTGCTAATTGCAAAAT------------------------------------------------------------AGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAC------ACAC-AGGTTTCAT---GGTCAG----------------.................................................................................2623.507070000
.............................................................................................................AGATACGATAAAACTA-AGAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003210000
.............................................................................................................AGATACGATAAAACTA-AGAACGCAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.003030000
................................................................................................................TACGATAAAACTA-AGAACGCAGAATC-------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003021000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAC------ACAC-AGGTTTCAT---GGTCA..................................................................................................2522.004040000
...............................................................................................................................................................GA----TG--ACTATATGTAAAACTATATGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002020000
...............................................................................................................................................................GA----TG--ACTATATGTAAAACTATATGACTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
................................................................................................................TACGATAAAACTA-AGAACGCAGAATC-------------G-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.............................................................................................................AGATACGATAAAACTA-AGAACGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...............................................................................................................................................................................................TATAT--------------------------GTAAAATTTCAACCAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............................................................................................................................................................................................CTATAT--------------------------GTAAAATTTCAACCAGATCA---------------------------------------------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
........................................................................................................TTTAAAGATACGATAAAACTA-AGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....................................................................................................................................................................TG--ACTATATGTAAAACTATATGACTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........................................................................................................TAAAGATACGATAAAACTA-AGAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........................................................................................................................................................TAGAGGA----TG--ACTATATGTAAAACTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.....................................................................................................................................................................................................................................TTCAACCAGATCA---------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTA-------------------------------------------------------------------TTAT--------------------------------.........................................................................................................................................................................................................................................................................................................................2511.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAC------ACAC-AGGTTTCAT---GGTCAG----------------T................................................................................2711.001010000
...........................................................................................................AAAGATACGATAAAACTA-AGAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...................................................................................................................................................................................................T--------------------------GTAAAATTTCAACCAGATCA---------------------------------------------------------------------------------------------------------------------------------------------------------TATAA...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...........................................................................................................................................................................TATATGTAAAACTATATGACTATAT--------------------------G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........................................................................................................................................................TAGAGGA----TG--ACTATATGTAAAACTATAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
................................................................................................................TACGATAAAACTA-AGAACGCAGAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---GGTCAG----------------TTTTGCTAATTGCAAAA................................................................2611.001010000
..........................................................................................................................CTA-AGAACGCAGAATC-------------G-TAGAGGA----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
................................................................................................................TACGATAAAACTA-AGAACGCAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.............................................................................................................AGATACGATAAAACTA-AGAACGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501010000
...........................................................................................................................TA-AGAACGCAGAATC-------------G-TAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAC------ACAC-AGGTTTCAT---GGTCAG----------------T................................................................................26200.408260000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCTTTCTCGCTCTGT--------------------------C-----------------------------------------------------------------------TC------TTTC..................................................................................................................................2630.331010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAC------ACAC-AGGTTTCAT---GGTC...................................................................................................24120.334040000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGCTCTGT--------------------------C-----------------------------------------------------------------------TC------TTTCTAAC------ACAC-AG.................................................................................................................2850.201010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAC------ACAC-AGGTTTCAT---GGTCAG----------------TT...............................................................................27200.204040000
....................................................................................................................................CAGAATC-------------G-TAGAGGA----TG--ACTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204000004
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAC------ACAC-AGGTTTCAT---GGTCAG----------------TTT..............................................................................28200.204040000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCGCTCTGT--------------------------C-----------------------------------------------------------------------TC------TTTCTAAC------ACAC-A..................................................................................................................2860.171010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTCATTCTTTCTCGCTCT..................................................................................................................................................................................................................................................21200.153030000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGT--------------------------C-----------------------------------------------------------------------TC------TTTCTAAC------ACAC-AGGT...............................................................................................................2570.141010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCGCTCTGT--------------------------C-----------------------------------------------------------------------TC------TTTCTAAC------AC......................................................................................................................2570.141010000
...........................................................................................................................TA-AGAACGCAGAATC-------------G-TAGAGGA----TA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.141100000
..........................................................................................................................................................................................................................................CCAGATCA---------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTA-------------------------------------------------------------------TTAT--------------------------------A--------------G--CCA-----------GA.......................................................................................................................................................................................................................................................................................2780.131010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGCTCTGT--------------------------C-----------------------------------------------------------------------TC------TTTCTAAC------AC......................................................................................................................24100.101010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAC------ACAC-AGGTTTCAT---GGTCAG----------------.................................................................................24200.102020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAC------ACAC-AGGTTTCAT---GGTCA..................................................................................................24200.102020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAC------ACAC-AGGTTTCAT---GGT....................................................................................................23120.081010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAC------ACAC-AGGTTTCAT---G......................................................................................................21130.081010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTTCATTCTTTCTCGCTCT..................................................................................................................................................................................................................................................22200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------ACAC-AGGTTTCAT---GGTCAG----------------TTTTG............................................................................25200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------ACAC-AGGTTTCAT---GGTCAG----------------T................................................................................23200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------ACAC-AGGTTTCAT---GGTCAG----------------TTTTGC...........................................................................26200.051010000
.....................................................................................................................................AGAATC-------------G-TAGAGGA----TG--ACTATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
.................................................................................................................................ACGCAGAATC-------------G-TAGAGGA----TG--AC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTTCATTCTTTCTCGCT....................................................................................................................................................................................................................................................22200.051010000
..........................................................................................................................................C-------------G-TAGAGGA----TG--ACTATATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
droWil2
TCCGTCCGTCCATCCGTTAAT----------------------------ATTGG-TGAGTTTA----TTACACCTATAAACTTCTGT--G---------------------------------------------------------------------------CC----------------------------------------------------------AAATTTGATCAAGAT---------------------------------------------------------------------CG-----------------------------------------GGTGACTATATC------------------------------ATATAGCTCCCATAGGAACGATTGGACGAAAGCTGTGACTT-TT--------------------------GTCA--ATAACTTCAAT-----------------------------------------------------------------TACTTTTGACGCGATTG------------------------------------------------------------------------------------------------------------------------CTTTTAAATT------CAAC-ATTTATTG--------------------------------------------------------------------------------------------GT----------TTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGATTGGACGAAAGCTGTGACTT-T..............................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
....TCCGTCCATCCGTTAAT----------------------------ATTGG-TGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACGATTGGACGAAAGCTGTGACT.................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
....TCCGTCCATCCGTTAAT----------------------------ATTGG-TGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
..............CGTTAAT----------------------------ATTGG-TGAGTTTA----TTACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
....................................................................TACACCTATAAACTTCTGT--G---------------------------------------------------------------------------CC----------------------------------------------------------AAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.43303000
............................................................................TAAACTTCTGT--G---------------------------------------------------------------------------CC----------------------------------------------------------AAATTTGATCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25101000
....................................................................TACACCTATAAACTTCTGT--G---------------------------------------------------------------------------CC----------------------------------------------------------AAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14101000
.........................................................................................G---------------------------------------------------------------------------CC----------------------------------------------------------AAATTTGATCAAGAT---------------------------------------------------------------------CG-----------------------------------------GGTGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10220000
......................................................................................................................................................................C----------------------------------------------------------AAATTTGATCAAGAT---------------------------------------------------------------------CG-----------------------------------------GGTGACTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGATTG------------------------------------------------------------------------------------------------------------------------CTTTTAAATT------CA......................................................................................................................20100.10101000
......................................................................................................................................................................................................................................TGATCAAGAT---------------------------------------------------------------------CG-----------------------------------------GGTGACTATATC------------------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTTGACGCGATTG------------------------------------------------------------------------------------------------------------------------CTTTTAAATT------........................................................................................................................27200.05100100
..................................................................................TCTGT--G---------------------------------------------------------------------------CC----------------------------------------------------------AAATTTGATCAAGAT---------------------------------------------------------------------CG-----------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
....................................................................................................................................................................................................................................................................................................................................................................ACTATATC------------------------------ATATAGCTCCCATAGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
.................................................................................................................................................................................................................................AAATTTGATCAAGAT---------------------------------------------------------------------CG-----------------------------------------GGTGACTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
....................................................................................................................................................................................................................................TTTGATCAAGAT---------------------------------------------------------------------CG-----------------------------------------GGTGACTATATC------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCGATTG------------------------------------------------------------------------------------------------------------------------CTTTTAAATT------........................................................................................................................20200.05100010
droVir3
TCTGATCGTCTGTCCGACCATCCGTA--------TCTATGAACGAATCAATCTA---------------AGAACTAGAGAATTGAGACC--T----------------------------------TGAATATTGGTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTATTCCTAGTAAATCTTTAAGGTTTTAGAAGCTAGACTCACGAAATTTGACATGTATCTTCTAGTT-------------------------------------------------------------------------------------------------------------------------------------------AAGTATAAACA---GATCAAGTATCTTTCA--------------------------TTTTATATATGTTGTT-------------------GCTAAAAGA-------AAGTAAAGG------GT----------ATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TCCGTCTGTCTGTCTGTTCGTCCGTCTGTCCGTATGTATGAACGCGTCGACTTC-AGAAGATA----TAAGAGCTAGAGACT---------TTGTATTTATTTTTTAAATAATCTTACTAAGCTT-TTGCC-------------ACAAATTTA-------------------------------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------------------GATACAG----TTGTTTGCTTTGGTTTTTCAA--CTGA----------G--------------------------------------------------------------------ATTA--TTATA-------------------------------------------------------GTTTTCTCTAGTTAG-GGATTT------TCAGTTTTTTTCTTTCTTTAT--------------------------T-----------------------------------------------------------------------TT------TTTTTTC--------------TTTGCA--------------------------GTTTACTGTGCATAATGT---A-------------GCCAAAACG-------T--------------------------AGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................CGTATGTATGAACGCGTCGACTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23150.071100000
........................................................GAAGATA----TAAGAGCTAGAGACT---------TT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
droGri2
TCCGTCTGTATGAACAAATGG----------------------------ATCTC-ACATACCA----TTAAAGCTATAGACA-AATAT---T----------------------------------GGAATATAAGTTC--------------CCGTATACC----A--TATGCA------------TATT--A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCATTCAA---TTTGATCGATAGCTGCCCCC---------------------------------------------AT------------------------------------CTGGT--GAATA--TCCATACTCATCGAGCACACTCGACTAGATCATTCTTATTTGTTTTGT-------------------------------------------------------------------------------------------------GTGCAGCGATATATGCCCGGTGAATAC-ATTCTTAA--------------------------TTTGAAGA----------------------------------------------------------------------ATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:17 AM