ID:

dsi_15668

 Coordinate:

3r:26894910-26895151 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-42.1 -41.8 -41.7

Flybase annnotation

intron [3r_26894758_26894863_-]; CDS [3r_26894864_26894904_-]; five_prime_UTR [3r_26894905_26895014_-]; exon [3r_26894864_26895014_-]

No Repeatable elements found

Sense Strand Reads

-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#######################################################################################################################################################----
CGGTCGGATGGATGTCAATAGTTCGATAAGTAGTCCAGAATAATATAACGGTATAATTTATATTGGTTGTGACTTTTTAGAAAAAAACACACTATAAGTAATATCAATTTCCCTAAAGGATATTGATGATATGTAGTTAAATTAAATGCAATATTTTTAACCGTGCATCTCGTGAGTCGCCCATCTCAATTGCGCTCTTGTGTGTGTGCGTTTTTCCAGCTGTGATAAGCGACGATCGCACACTTGCTCTGAATAAACTATACTTTTTATTTATTCTTACATTTAATTCTAGTAATAATGTACGCCAGACTGCTCCGAAACTTGGGCGCAAATGCCAGGTGA
****************************************************((((((......)))))).........((((((..(((((((((((...(((((((.(((.....))).))))))).......((((((..............)))))).(((((.....((((........))))..))))).)))))).)))))..)))))).(((.(((....((((...)))).)))..)))..........************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 O001
Testis
 SRR553488
RT_0-2 hours eggs
......................................................................................................................................................................................................................................GACGATCGCACACTTGCTCTGAATAAAC.................................................................................... 28 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CTTGCTCTGAATAAACTATACTTTTT.......................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GACGATCGCACACTTGCTCTG........................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TAAGCGACGATCGCACACTTGCT.............................................................................................. 23 0 1 2.00 2 0 0 1 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................................................................................................TGCTCCGAAACTTGGGCGCAAATGCCAGG... 29 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................CGCCAGACTGCTCCGAAACT.................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....GCATGGATGTCAATAGTT............................................................................................................................................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................GACGATCGCACACTTGCTCTGAAT........................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TAAGCGACGATCGCACACTTGCTCT............................................................................................ 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................CGCACACTTGCTCTGAATAAACTATAC............................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................GCCAGACTGCTCCGAAACTTGGAC............... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................CGCACACTTGCTCTGAATAAACT................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CTTGCTCTGAATAAACTATACTTTT........................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TAAGCGACGATCGCACACTTGC............................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................ATAATTTATATTGGTTGTGACT............................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCCCTAAAGGATATTGATGATATGTAGA............................................................................................................................................................................................................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................CACACTTGCTCTGAATAAACTA.................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................TTAAATGCAATATTTTTAACCGTGC................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................AGCTGTGATAAGCGACGATCGC....................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................................GCACACTTGCTCTGAATAAACT................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................CACACTTGCTCTGAATAAACTATAC............................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................GCCAGACTGCTCCGAAACTTGGGC............... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CTTGCTCTGAATAAACTA.................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................TAATAATGTACGCCAGACTGCTCCGAAAC..................... 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................TGTACGCCAGACTGCTCCGAAACTT................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................ATAATGTACGCCAGACTG.............................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CGCTCTTGTGTGTGTGCGT................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
..........................................................................TGTTAGAAATAAACACACAATA...................................................................................................................................................................................................................................................... 22 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................CTGTTGTGTGTGTGCGTT.................................................................................................................................. 18 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................ACTTTGAACCGCGCATCTCG.......................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................................GCTATGATAGGCGACGA........................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................AAGGATATTGATGAGA................................................................................................................................................................................................................... 16 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................GCATCTCGTGGGTCGC.................................................................................................................................................................. 16 1 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................GTGACTGTTTAGCAAAA................................................................................................................................................................................................................................................................. 17 2 16 0.06 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................GCATCTCGTGACTCACACA............................................................................................................................................................... 19 3 17 0.06 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................AACCGTGCATCTCGGT........................................................................................................................................................................ 16 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................................................................................CTATACTGTATATTTATT................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................TGAACCGTGCATCTCGGT........................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................TAACCGCGCATCTCGGT........................................................................................................................................................................ 17 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCCAGCCTACCTACAGTTATCAAGCTATTCATCAGGTCTTATTATATTGCCATATTAAATATAACCAACACTGAAAAATCTTTTTTTGTGTGATATTCATTATAGTTAAAGGGATTTCCTATAACTACTATACATCAATTTAATTTACGTTATAAAAATTGGCACGTAGAGCACTCAGCGGGTAGAGTTAACGCGAGAACACACACACGCAAAAAGGTCGACACTATTCGCTGCTAGCGTGTGAACGAGACTTATTTGATATGAAAAATAAATAAGAATGTAAATTAAGATCATTATTACATGCGGTCTGACGAGGCTTTGAACCCGCGTTTACGGTCCACT
************************************************************************************((((((......)))))).........((((((..(((((((((((...(((((((.(((.....))).))))))).......((((((..............)))))).(((((.....((((........))))..))))).)))))).)))))..)))))).(((.(((....((((...)))).)))..)))..........**************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M024
male body		 SRR902009
testis
 M053
female body
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
.................................................................................................................................................................................................................................................................................................................GTCTGACGAGGCTTTGAACC................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
................................CAGGGCTTATTATAGTGC.................................................................................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 1 0 0 0 0 0 0
..............................ATCACGGCTTCTTATATTGC.................................................................................................................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 1 0 0 0 0 0
....................................TATTATTATATAGGCATATTA............................................................................................................................................................................................................................................................................................. 21 3 20 0.15 3 0 0 0 3 0 0 0 0
......................................TTATTATATAGGCATATTA............................................................................................................................................................................................................................................................................................. 19 2 14 0.14 2 0 0 0 2 0 0 0 0
.........................................................................................................................................................................................................................ACGACACTGTTCTCTGCTA.......................................................................................................... 19 3 11 0.09 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................................................ACTTGTTTGTTATGAAAAA.......................................................................... 19 2 12 0.08 1 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................TGAACAAGACTTATT...................................................................................... 15 1 18 0.06 1 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................................................................................................................ATTCTTATATGCGGCCTG................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:26894860-26895201 - dsi_15668 CGGTCGGATGGATGTCAATAGTTCGATAAGTAGTCCAGAATAATATAACGGT-ATAATTTATATTGGTTGTGACTTTTTAGAAAAAAACACACTATAAGTAATATCAATTTCCCTAAAGGATATTGATGATATGT-------------AGTTAAATT-----------------------AAATG-CAATATTTTTAACCGTGCA-------------------TCTCGTGAGTCGCCCATCTCAATTGC---GCTCTTG------------------TGTGTGTGCGTTTTTCCAGCTGTGATAAGCGACGATC----GCACACTTGCTCTG---AATAAA----CTATA-CTTTTTATTTATTCT-TACATTTA--ATTCTAGTAATAATGTACGCCAGACTGCTCCGAAACTTGGGCGCAAATGCCAGGTGA---------
droSec2 scaffold_31:273859-274200 - CGGTCGGATGGATGTCAATAGTTCGATAAGTAGTCCAGAATAATATAACGGT-ATAATTTATGTTGGTTGTGACTTTTTAAAAAAAAACACACTATAAGTAATATCAATTTCCCTAAAGGATATTGATGATATGT-------------AGATAAATT-----------------------AAATG-CAATATTTTTAACCGTGCA-------------------TCTCGTGAGTCGCCCATCTCAATTGC---GCTCTTG------------------TGTGTGTGCGTTTTTCCAGCTGTGATAAGCGACGATC----GCACACTTGCTCTG---AATAAA----CTATA-CTTTTTATTTATTTT-TACATTTA--AATCTAGTAATAATGTACGCCAGACTGCTCCGAAACTTGAGCGCAAATGCCAGGTGA---------
dm3 chr3R:27619296-27619648 - CGGTCGGATGGATGTCAACAGTTCGATAAATAGTCCAGAATAATATAACGGTAATATTTTTTATGGGTTGCAACTT----AAAAAAAACACAATATACGTAATATCAATTTCCCTAAAAGATATTGATGATATATGATAATCCCCAAAAGATATATG-----------------------AAACATTAATATTTTCAACCATGCA-------------------TCTCGTGAGTCGCCCATCTCAATTGC---GATCTTG------------------TGCGTGTGCGTTTTTCCAGCTGTGATAAGCGACGATC----GCACACTTGCTCTG---AATAAA----GTATA-TTTGTTATTTATTCT-TACAATTA--ATTCTACTAATAATGTACGCCAGACTGCTGCGAAACTTCGGCGCAAACGCCAGGTGA---------
droEre2 scaffold_4820:350939-351292 + CGGTCGGATGGAAGTCGATAGTTCGATAAGTAGTAGAGAATAAAGTAACGGATATATTTTAA-AGGGTTAGCACTTT-TAGCAAGGAGCAAACTAGAAATAATATCACTTTCCTTAAAA-ATATTTATGAAATGA-------------AGAAAAGTT-----------------------AAATA-CAATATCTGTGGCCGTGCA-------------------TCTCGGGGGTCGCCCATCTCAATTGC---GCGCTTGTGTGTGTGTGTATGTGTG----TGCTTGTGTTTCCAGCTGTGATAAGCGAAGATC----GCACACTTGCTCTA---AATAAA----CTGTA-TTTTGTATTTATAAT-TGCATTTA--AATCTAGTAAAAATGTACGCGAGGCTGCTGCGAAACTTGGGCACTAATGTCAGGTGA---------
droYak3 3R:28553951-28554297 - CGGTCGTATGGATGTCGATAGTTCGATAATTAGTGGAAAATAAAATAACGGTAATA-TTTCAAAGTGTTAGGACTTTTT-ACCAGAAGCACACTCGAAATAATTTCAATTTTATACAAA-TTTATGATGAAATGA-------------AGACAAAT------------------------AAATA-AAATTGTATTGGCCGGCAA-------------------TGCTGTGAATTGCCCATCTCAATTGC---GCGCTTGTGTGGGTG------TGTG----TGCGTGTGTTTCCAGCTGTGATAAGCGACGATC----GCACACTTGCTCTA---AATAAG----CTATA-TTTTTTATTTACTCT-TGCATTTA--AATATAGTAAAAATGTACGCGAGACTGCTGCGAAACTTGGGCGCTAATGCCAGGTGA---------
droEug1 scf7180000409488:283820-283961 + TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGTTTCGTCCAGTGATAACAGACGATC----GCTCCCGTACTGTATCGTATTGTCGTATTGTA--ATATTATAGTTCTT-TGCATTTA--CACTAAGTCAGTATGTATTCAAGACTGCTGCGTGTCGTAGGTAAAAATGCAAGGTGA---------
droBia1 scf7180000302035:285625-285869 - GAGGAGA--------------------------------------------------------------------------------ACCCACT------------------------------------------------------------------------TAAGTAAACATATTTAACATAAATAACATCAAACATATATTTTCTATTAAAAAATAACCATCATAAA-CTCCCATCTTTAACACC--GAGTTTG------------------TATGTGTGCG----TCCAGCTGTGATAAGAGACGATCGTTCGCGCGCCTGCTTC----CATAAA----CTATA-AT-TTTATAGTTTTA-GGCACCTA--AACACAGTTAGAATGTACGCGAGACTGCTGCGCAACTTGGGCGCCAATGCCAGGTGA---------
droTak1 scf7180000415712:712803-713019 - T------------------------------------------------------------------------------------------------------------------------------------------------------TAAATAAAATCTGCTT-------------------AAATATTTTCCAAAATGTT-------------------TTTTAAAAATC-CCCATCTCTAATGCCTAGTACTTG------------------TGTATGTGCGTGTTTCCAGCTGTGATAAGAGAAGATCATTCGCACAGTTGCTCCC----ATAAA----CTGTA-TTTTTAATAGTTTTTTAGCATTTA--AACACAGTTGAAATGTACGCGAGACTGCTGCGCAACTTGGGCGCCAATGCCAGGTGA---------
droEle1 scf7180000491194:1673379-1673515 - TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGTGCTATCAGCT--GATAAGAATCGATC----ACCCTATTGCTCCG---AGTAAA----ATATT-TATCAAATAGATTTATTGCATTTA--AATATAGTTATAATGTACGCAAGACTTATCTGCAGCGCGGGCGCGAGTGCCAGGTGA---------
droRho1 scf7180000779322:69036-69172 + G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTTTCCAGCCGTGATAA--GACGATC----ACCCATTTGCTCCG---CGTAAA----ACATA-TTCTTAATAGTTTTG-TTTCTTTT--AATATTGTTAAAATGTACGCGAGACTGATCTGCAGATTGGGCGCGAACGCCAGGTGA---------
droFic1 scf7180000454097:44757-44898 - CGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG------------------CATGTGT-----ATACTAGCTGTGATAAGAGACGATC----GCACTTTTGTGCCG---AATAAG-----T--A-TATTTTAAAAACTTG-TGCATAAA--AACATACACATAATGTACACAAGACTACTTCACAATTTGGTTGCAACCGGCAGGTGA---------
droKik1 scf7180000301641:102626-102694 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-TGCATTTA--CTTAGAGTAAGAATGTATGCCAGACTACTCCGCAACGTTGGAGCCAATGTCAGGTGA---------
droAna3 scaffold_12911:3465965-3466087 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAACAGAAGATC----GCACATTCGCAACATCTAATAAT----CTTCA-CATTTTACAGATTAT-TGCATTTATTAGACGATAGACGATGTATGCGAGACTGCTGCGCAGCTTTGGAGCAAATGCCAGGT-----------
droBip1 scf7180000396640:329802-329923 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAACAGAAGAAC----GCACATTCGCAACATCTAATATT----CTTTA-CATTTTACAGATTAT-TGCATTTAT-TAGACAATAACGATGTATGCGAGACTGCTGCGCAGCGTTGGAGCAAATGCCAGGT-----------
dp5 2:14066631-14066688 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATTTA----------AACCATGTATGCGAGACTTTTGCGCAGCGTTGGCGCAAGTGCAAGGTAT---------
droPer2 scaffold_0:6374953-6375014 + T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATTTA--AGTACA--AACCATGTATGCGAGACTTTTGCGCAGCGTTGGCGCAAGTGCAAGGT-----------
droVir3 scaffold_13047:11152918-11153015 - TGCTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AATAAA----TAATT-GTTTTTATTCATTAT-TTACATTA--AACAACACAAAAATGTATACAAGACTATTGCAGCATTTTGGTCACAGTGTAAGGTAA---------
droMoj3 scaffold_6540:30606201-30606312 + G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA----ACACGCTAGCAATA-------AA----ATATTTTATTTTTATTAATTA-TT--TACATTAGCTAGCGAAAAATGTACACTAGACTCTTGCAAAGTTTTGGCAGTAGCGTCAGGTAATAAA---TG
droGri2 scaffold_14624:1051031-1051173 - G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGCATCGCACTGATCGTGATTGGAGCTGATA----AGGCGGCTGC---C---AATAAA----TTAAATTCCTTTAAT--TAAT-TGCATTTA--ACAGTAA-TAAAATGTATACAAGACTTTTGCAGCATTTCGGCAACGGTGTCAGGTATTAAACTCTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGGTCGGATGGATGTCAATAGTTCGATAAGTAGTCCAGAATAATATAACGGT-ATAATTTATATTGGTTGTGACTTTTTAGAAAAAAACACACTATAAGTAATATCAATTTCCCTAAAGGATATTGATGATATGT-------------AGTTAAATT-----------------------AAATG-CAATATTTTTAACCGTGCA-------------------TCTCGTGAGTCGCCCATCTCAATTGC---GCTCTTG------------------TGTGTGTGCGTTTTTCCAGCTGTGATAAGCGACGATC----GCACACTTGCTCTG---AATAAA----CTATA-CTTTTTATTTATTCT-TACATTTA--ATTCTAGTAATAATGTACGCCAGACTGCTCCGAAACTTGGGCGCAAATGCCAGGTGA---------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................GACGATC----GCACACTTGCTCTG---AATAAA----C.................................................................................................2813.00300300000000000000
....................................................................................................................................................................................................................................................................................................................................CTTGCTCTG---AATAAA----CTATA-CTTTTT......................................................................................2612.00202000000000000000
....................................................................................................................................................................................................................................................................................................................GACGATC----GCACACTTGCTCTG---............................................................................................................2112.00200200000000000000
...............................................................................................................................................................................................................................................................................................................TAAGCGACGATC----GCACACTTGCT..................................................................................................................2312.00200000001100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCGAAACTTGGGCGCAAATGCCAGG............2912.00200000002000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGACTGCTCCGAAACT.............................2011.00110000000000000000
....................................................................................................................................................................................................................................................................................................................GACGATC----GCACACTTGCTCTG---AAT.........................................................................................................2411.00101000000000000000
...............................................................................................................................................................................................................................................................................................................TAAGCGACGATC----GCACACTTGCTCT................................................................................................................2511.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................C----GCACACTTGCTCTG---AATAAA----CTATA-C...........................................................................................2711.00100000100000000000
..........................................................................................................................................................................................................................................................................................................................C----GCACACTTGCTCTG---AATAAA----CT................................................................................................2311.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................CTTGCTCTG---AATAAA----CTATA-CTTTT.......................................................................................2511.00110000000000000000
...............................................................................................................................................................................................................................................................................................................TAAGCGACGATC----GCACACTTGC...................................................................................................................2211.00100000000001000000
.....................................................ATAATTTATATTGGTTGTGACT.................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..............................................................................................................TCCCTAAAGGATATTGATGATATGT-------------AGA.....................................................................................................................................................................................................................................................................................................2811.00100000001000000000
................................................................................................................................................................................................................................................................................................................................CACACTTGCTCTG---AATAAA----CTA...............................................................................................2211.00110000000000000000
...........................................................................................................................................................TT-----------------------AAATG-CAATATTTTTAACCGTGC................................................................................................................................................................................................................................................2511.00100010000000000000
.......................................................................................................................................................................................................................................................................................................AGCTGTGATAAGCGACGATC----GC...........................................................................................................................2211.00100000100000000000
...............................................................................................................................................................................................................................................................................................................................GCACACTTGCTCTG---AATAAA----CT................................................................................................2211.00101000000000000000
................................................................................................................................................................................................................................................................................................................................CACACTTGCTCTG---AATAAA----CTATA-C...........................................................................................2511.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GCCAGACTGCTCCGAAACTTGGGC........................2411.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................CTTGCTCTG---AATAAA----CTA...............................................................................................1811.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TAATAATGTACGCCAGACTGCTCCGAAAC..............................2911.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TGTACGCCAGACTGCTCCGAAACTT............................2511.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATAATGTACGCCAGACTG.......................................1811.00101000000000000000
.........................................................................................................................................................................................................................................................C---GCTCTTG------------------TGTGTGTGCGT...........................................................................................................................................................1911.00100001000000000000
....................................................................................................................................................................................................AACCGTGCA-------------------TCTCGGT.....................................................................................................................................................................................................................16190.05100000000010000000
droSec2
CGGTCGGATGGATGTCAATAGTTCGATAAGTAGTCCAGAATAATATAACGGT-ATAATTTATGTTGGTTGTGACTTTTTAAAAAAAAACACACTATAAGTAATATCAATTTCCCTAAAGGATATTGATGATATGT-------------AGATAAATT-----------------------AAATG-CAATATTTTTAACCGTGCA-------------------TCTCGTGAGTCGCCCATCTCAATTGC---GCTCTTG------------------TGTGTGTGCGTTTTTCCAGCTGTGATAAGCGACGATC----GCACACTTGCTCTG---AATAAA----CTATA-CTTTTTATTTATTTT-TACATTTA--AATCTAGTAATAATGTACGCCAGACTGCTCCGAAACTTGAGCGCAAATGCCAGGTGA---------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................GACGATC----GCACACTTGCTCTG---AATA........................................................................................................2511.0011000
...............................................................................................................................................................................................................................................................................................................TAAGCGACGATC----GCACACTTGCTCT................................................................................................................2511.0010010
....................................................................................................................................................................................................................................................................................................TCCAGCTGTGATAAGCGACGATC----GCACA........................................................................................................................2811.0010010
....................................................................................................................................................................................................................................................................................................TCCAGCTGTGATAAGCGACGATC----GCA..........................................................................................................................2611.0010001
.......................................................................................................................................................................................................................................................................................................AGCTGTGATAAGCGACGATC----GCA..........................................................................................................................2311.0010001
dm3
CGGTCGGATGGATGTCAACAGTTCGATAAATAGTCCAGAATAATATAACGGTAATATTTTTTATGGGTTGCAACTT----AAAAAAAACACAATATACGTAATATCAATTTCCCTAAAAGATATTGATGATATATGATAATCCCCAAAAGATATATG-----------------------AAACATTAATATTTTCAACCATGCA-------------------TCTCGTGAGTCGCCCATCTCAATTGC---GATCTTG------------------TGCGTGTGCGTTTTTCCAGCTGTGATAAGCGACGATC----GCACACTTGCTCTG---AATAAA----GTATA-TTTGTTATTTATTCT-TACAATTA--ATTCTACTAATAATGTACGCCAGACTGCTGCGAAACTTCGGCGCAAACGCCAGGTGA---------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCTGCGAAACTTCGGCG.......................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CTTGCTCTG---AATAAA----GTA...............................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AGCTGTGATAAGCGACGATC----G............................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000002000
..............................................................................................................................................................................................................................................................................................................................................................................................................CAGACTGCTGCGAAACTTCGGC........................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AATTGC---GATCTTG------------------TGCGTG................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000002000000000000000000000000000000000010000000000000000000000000
.......................................................................................ACACAATATACGTAATATC..................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ACTTGCTCTG---AATAAA----GTATA-TTTGT.......................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCAGACTGCTGCGAAACTTCG..........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GCTGTGATAAGCGACGAT..................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TAAGCGACGATC----GCACACTTGC...................................................................................................................2213.0030000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................CACTTGCTCTG---AATAAA----G.................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
........................................................................................................................................................................................................................................................................................................GCTGTGATAAGCGACGATC----G............................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ATCTTG------------------TGCGTGTGCGTT..........................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CGATC----GCACACTTGCTCTG---AA..........................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCTGCGAAACTTCGGCGC......................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AATTGC---GATCTTG------------------TGCGT.................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TTTATTCT-TACAATTA--ATTCTACTAA........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TTG------------------TGCGTGTGCGTTTTTCCAG...................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................................................................................................................................................................................CAACCATGCA-------------------TCTCGTGAG...................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTACGCCAGACTGCTGCG..................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CTTGCTCTG---AATAAA----GTATA-............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TCTACTAATAATGTACGCCAGACTGC......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TAAGCGACGATC----GCACACTTGCTT.................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AGCTGTGATAAGCGACGATC----GC...........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................................................................................................................TTG------------------TGCGTGTGCGTTTTTCCAGCTG................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AACCATGCA-------------------TCTCGTGAGTCGCCCATCTC........................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGCGCAAACGCCAGGTGA---------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AACGGTAATATTTTTTATGGGT........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CGACGATC----GCACACTTGCTCTG---............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTACGCCAGACTGCTGCGAAA...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................TAGTCCAGAATAATATAACGGTAA......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GCGACGATC----GCACACTTGCTCT................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................................................................................................................................ATATATGATAATCCCCAAAAG......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TTATTCT-TACAATTA--ATTCT.............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TGCGTGTGCGTTTTTCCAGCTGTG..............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CCAGCTGTGATAAGCGACGATC----GCAC.........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATAAATAGTCCAGAATAATATA.............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTCAATTGC---GATCTTG------------------TGCGTG................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GATAAGCGACGATC----GCACA........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................G------------------TGCGTGTGCGTTTTTCCAG...................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................................................................................................TGC---GATCTTG------------------TGCGTGTGC.............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TCTCGTGAGTCGCCCATCTCAATTGC---GA.............................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................ATAATGTACGCCAGACTG.......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CGTGTGCGTTTTTCCAGCTG................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CACACTTGCTCTG---AATAAA----GTA...............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................................................................................................................................................................................................................CGATC----GCACACTTGCTCTG---A...........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CGACGATC----GCACACTTGCTC.................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................................................................................................................................TCTTG------------------TGCGTGTGCGTTTTTC......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CGATC----GCACACTTGCTCTG---AATAAA----G.................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AATCCCCAAAAGATATATG-----------------------A.......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AATGTACGCCAGACTGCTGCGA.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GACGATC----GCACACTTGCT..................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CCAGCTGTGATAAGCGACGA...................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AACCATGCA-------------------TCTCGTGAGTCGC...............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ATATTGATGATATATGAT..................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TCTTG------------------TGCGTGTGCGTTTTTCCAGC..................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGATAAGCGACGATC----GCACA........................................................................................................................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ATGTACGCCAGACTGCTGT...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................................................................................................................AATAATGTACGCCAGACTG.......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................CTTG------------------TGCGTGTGCGTTTTTCCAG...................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................GTGTGCGTTTTTCCAGCTGTGATAAGC........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TTCCCTAAAAGATATTGATGATATA......................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................ATCTCAATTGC---GATCTTG------------------TGCGTGTGC.............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAACTTCGGCGCAAAC..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CCAGCTGTGATAAGCGACGATC----GCACACT......................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGGTCGGATGGAAGTCGATAGTTCGATAAGTAGTAGAGAATAAAGTAACGGATATATTTTAA-AGGGTTAGCACTTT-TAGCAAGGAGCAAACTAGAAATAATATCACTTTCCTTAAAA-ATATTTATGAAATGA-------------AGAAAAGTT-----------------------AAATA-CAATATCTGTGGCCGTGCA-------------------TCTCGGGGGTCGCCCATCTCAATTGC---GCGCTTGTGTGTGTGTGTATGTGTG----TGCTTGTGTTTCCAGCTGTGATAAGCGAAGATC----GCACACTTGCTCTA---AATAAA----CTGTA-TTTTGTATTTATAAT-TGCATTTA--AATCTAGTAAAAATGTACGCGAGGCTGCTGCGAAACTTGGGCACTAATGTCAGGTGA---------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................ATC----GCACACTTGCTCTA---AA..........................................................................................................1912.0020000002
...................................................................................................................................................................................................................................................................................GTG----TGCTTGTGTTTCCAGCT.................................................................................................................................................2011.0011000000
....................................................................................................................................................................................................................................................................................................................GAAGATC----GCACACTTGCTCT................................................................................................................2011.0010000010
................................................................................................................................................................................................................................................................................................................AAGCGAAGATC----GCACACTTGCTC.................................................................................................................2311.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................AATGTACGCGAGGCTGCTGC...................................2011.0010100000
...............................................................................................................................................................................................................................................................................ATGTGTG----TGCTTGTGTTTC......................................................................................................................................................1911.0010000100
droYak3
CGGTCGTATGGATGTCGATAGTTCGATAATTAGTGGAAAATAAAATAACGGTAATA-TTTCAAAGTGTTAGGACTTTTT-ACCAGAAGCACACTCGAAATAATTTCAATTTTATACAAA-TTTATGATGAAATGA-------------AGACAAAT------------------------AAATA-AAATTGTATTGGCCGGCAA-------------------TGCTGTGAATTGCCCATCTCAATTGC---GCGCTTGTGTGGGTG------TGTG----TGCGTGTGTTTCCAGCTGTGATAAGCGACGATC----GCACACTTGCTCTA---AATAAG----CTATA-TTTTTTATTTACTCT-TGCATTTA--AATATAGTAAAAATGTACGCGAGACTGCTGCGAAACTTGGGCGCTAATGCCAGGTGA---------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................CGACGATC----GCACACTTGCTCTA---AATAAG----CTAT..............................................................................................3214.00400000000004
.............................................................................................................................................................................................................................................................................................................GATAAGCGACGATC----GCACACTTGCTCT................................................................................................................2711.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TACGCGAGACTGCTGCGAAACT.............................2211.00110000000000
droEug1
TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGTTTCGTCCAGTGATAACAGACGATC----GCTCCCGTACTGTATCGTATTGTCGTATTGTA--ATATTATAGTTCTT-TGCATTTA--CACTAAGTCAGTATGTATTCAAGACTGCTGCGTGTCGTAGGTAAAAATGCAAGGTGA---------SizeHit CountTotal NormTotal
No Reads
droBia1
GAGGAGA--------------------------------------------------------------------------------ACCCACT------------------------------------------------------------------------TAAGTAAACATATTTAACATAAATAACATCAAACATATATTTTCTATTAAAAAATAACCATCATAAA-CTCCCATCTTTAACACC--GAGTTTG------------------TATGTGTGCG----TCCAGCTGTGATAAGAGACGATCGTTCGCGCGCCTGCTTC----CATAAA----CTATA-AT-TTTATAGTTTTA-GGCACCTA--AACACAGTTAGAATGTACGCGAGACTGCTGCGCAACTTGGGCGCCAATGCCAGGTGA---------SizeHit CountTotal NormTotal
No Reads
droTak1
T------------------------------------------------------------------------------------------------------------------------------------------------------TAAATAAAATCTGCTT-------------------AAATATTTTCCAAAATGTT-------------------TTTTAAAAATC-CCCATCTCTAATGCCTAGTACTTG------------------TGTATGTGCGTGTTTCCAGCTGTGATAAGAGAAGATCATTCGCACAGTTGCTCCC----ATAAA----CTGTA-TTTTTAATAGTTTTTTAGCATTTA--AACACAGTTGAAATGTACGCGAGACTGCTGCGCAACTTGGGCGCCAATGCCAGGTGA---------SizeHit CountTotal NormTotal
No Reads
droEle1
TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGTGCTATCAGCT--GATAAGAATCGATC----ACCCTATTGCTCCG---AGTAAA----ATATT-TATCAAATAGATTTATTGCATTTA--AATATAGTTATAATGTACGCAAGACTTATCTGCAGCGCGGGCGCGAGTGCCAGGTGA---------SizeHit CountTotal NormTotal
No Reads
droRho1
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTTTCCAGCCGTGATAA--GACGATC----ACCCATTTGCTCCG---CGTAAA----ACATA-TTCTTAATAGTTTTG-TTTCTTTT--AATATTGTTAAAATGTACGCGAGACTGATCTGCAGATTGGGCGCGAACGCCAGGTGA---------SizeHit CountTotal NormTotal
No Reads
droFic1
CGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG------------------CATGTGT-----ATACTAGCTGTGATAAGAGACGATC----GCACTTTTGTGCCG---AATAAG-----T--A-TATTTTAAAAACTTG-TGCATAAA--AACATACACATAATGTACACAAGACTACTTCACAATTTGGTTGCAACCGGCAGGTGA---------SizeHit CountTotal NormTotal
No Reads
droKik1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-TGCATTTA--CTTAGAGTAAGAATGTATGCCAGACTACTCCGCAACGTTGGAGCCAATGTCAGGTGA---------SizeHit CountTotal NormTotal
No Reads
droAna3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAACAGAAGATC----GCACATTCGCAACATCTAATAAT----CTTCA-CATTTTACAGATTAT-TGCATTTATTAGACGATAGACGATGTATGCGAGACTGCTGCGCAGCTTTGGAGCAAATGCCAGGT-----------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................ATAGACGATGTATGCGAGACT........................................2111.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................CGATGTATGCGAGACTGCTG....................................2011.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................ACGATGTATGCGAGACTGC......................................1911.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................GCGAGACTGCTGCGCAGCTTT...........................2111.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................AGACGATAGACGATGTATGC..............................................2011.001000001
.................................................................................................................................................................................................................................................................................................................ACAGAAGATC----GCACATTCGC...................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................................................................................................................................GATTAT-TGCATTTATTAGAC..............................................................2011.001010000
....................................................................................................................................................................................................................................................................................................................................................AT----CTTCA-CATTTTACAGATTAT-TGCAT.......................................................................2711.001001000
...............................................................................................................................................................................................................................................................................................................................................................................................................AGACTGCTGCGCAGCTTTGGAGC......................2311.001010000
droBip1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAACAGAAGAAC----GCACATTCGCAACATCTAATATT----CTTTA-CATTTTACAGATTAT-TGCATTTAT-TAGACAATAACGATGTATGCGAGACTGCTGCGCAGCGTTGGAGCAAATGCCAGGT-----------SizeHit CountTotal NormTotal
No Reads
dp5
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATTTA----------AACCATGTATGCGAGACTTTTGCGCAGCGTTGGCGCAAGTGCAAGGTAT---------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................TGCATTTA----------AACCATGTATGCGAGA..........................................2411.0010100000000
droPer2
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATTTA--AGTACA--AACCATGTATGCGAGACTTTTGCGCAGCGTTGGCGCAAGTGCAAGGT-----------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTTGCGCAGCGTTG..........................1811.001001000
droVir3
TGCTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AATAAA----TAATT-GTTTTTATTCATTAT-TTACATTA--AACAACACAAAAATGTATACAAGACTATTGCAGCATTTTGGTCACAGTGTAAGGTAA---------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................TACAAGACTATTGCAGCATTTTGGT........................2511.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGTCACAGTGTAAG.............1911.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCATTTTGGTCACAGTGTAAGGT...........2711.001000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................A----TAATT-GTTTTTATTCATT...............................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA----ACACGCTAGCAATA-------AA----ATATTTTATTTTTATTAATTA-TT--TACATTAGCTAGCGAAAAATGTACACTAGACTCTTGCAAAGTTTTGGCAGTAGCGTCAGGTAATAAA---TGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGCATCGCACTGATCGTGATTGGAGCTGATA----AGGCGGCTGC---C---AATAAA----TTAAATTCCTTTAAT--TAAT-TGCATTTA--ACAGTAA-TAAAATGTATACAAGACTTTTGCAGCATTTCGGCAACGGTGTCAGGTATTAAACTCTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:45 PM