ID:

dsi_15644

 Coordinate:

3l:11240818-11240967 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.8 -19.7 -19.5

Flybase annnotation

CDS [3l_11240968_11241128_-]; exon [3l_11240968_11241128_-]; intron [3l_11239501_11240967_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCGAAAACTTAAGTATATAGAAGAACGACATCCATTACCACCCACAACTGGCTAATTGAAGTTCACGTGATTCTCTGTGTTTTCGGATTCCTTTCGAAATTGCCTTTATTATTTACTCACATCTGTCATTTTGCCTCCATTGTTGGCAGCAGCTTTATCGTGTGATTTACAAATGAGTTTAACGAGCGTCGTC
**************************************************.(((((((...))))))).......((((..(((((.((.(((((((........))).)))).)).))...)))..))))..(((.(((((((.....))))))).)))........................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 M024
male body		 SRR902008
ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
........................CTACAATGAATGGCTAGC................................................................................................................................................................................................................ 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.......CTTCCAGCTGGTTTGGACT................................................................................................................................................................................................................................ 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0
............AGCTGGTTTGGACTACAATGAATGGCTA.................................................................................................................................................................................................................. 28 0 1 2.00 2 0 0 0 2 0 0 0 0 0
.................................................................TTAAGTATATCGAACAACGACT................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0
...................TTGGACTACAATGAATGGC.................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................TGGACTACAATGAATGGCTA.................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................TTTATCGTGTGATTTACA...................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0
..................................................................TAAGTATATCGAACAACGACT................................................................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0
...............TGGTTTGGACTACAATGAATGGCTAGC................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1
................GGTTTGGACTACAATGAATGGCTAGCGG.............................................................................................................................................................................................................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...............................................................................................................ATTGAAGTTCACGTGATTCTCTGT................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0
................GGTTTGGACTACAATGAATGGCTAGA................................................................................................................................................................................................................ 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.............GCTGGTTTGGACTACAATGAATGGCT................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................TTTGGACTACAATGAATGGCT................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.......CTTCCAGCTGGTTTGGAC................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................ACAATGAATGGCTAGCGTCA............................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..............................................CTCAGTAAGTGTCGAAAA.......................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 1 0 0 0
...........................................TCACACAGTAGGACTCGAAA........................................................................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0
.......CTTCCGGCTGGTCTGGAGT................................................................................................................................................................................................................................ 19 3 18 0.06 1 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TCACCTAGAAGGTCGACCAAACCTGATGTTACTTACCGATCGCAGTGTGTCATTCAAAGCTTTTGAATTCATATATCTTCTTGCTGTAGGTAATGGTGGGTGTTGACCGATTAACTTCAAGTGCACTAAGAGACACAAAAGCCTAAGGAAAGCTTTAACGGAAATAATAAATGAGTGTAGACAGTAAAACGGAGGTAACAACCGTCGTCGAAATAGCACACTAAATGTTTACTCAAATTGCTCGCAGCAG
**************************************************.(((((((...))))))).......((((..(((((.((.(((((((........))).)))).)).))...)))..))))..(((.(((((((.....))))))).)))........................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
.........................................................................TATCTTCTTTCTGTAG................................................................................................................................................................. 16 1 1 1.00 1 1 0 0 0
..................................................................................................................CTTCAAGTTCAGTAAGAGGC.................................................................................................................... 20 3 6 0.17 1 0 1 0 0
.....................................................................................GTACGTAGTGGTGGGTGTT.................................................................................................................................................. 19 2 7 0.14 1 0 0 1 0
.........................................................................................................................................................................AGTGAGTGTAGACAGTTAAG............................................................. 20 3 8 0.13 1 0 1 0 0
...............................................................................................................................................................GGAAATAATAAAAGAGAGTG....................................................................... 20 3 20 0.05 1 0 1 0 0
........................GATGTTTGTTAACGATCGC............................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:11240768-11241017 - dsi_15644 AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCG------------------AA-----AACTTAAGTATAT-AGA---------------------------------------------------------------------A------------------------GAACGACATCC------------ATTACCACCCACAACTGGCTAATT--GAAGTTCACGTGAT---TCTCT-GTGTT-----T------TCGGA--TTCCT-TTCGAAATTGCCTTTAT---TATTTAC--TCACATCTG--TCATTTTGCC---------------------TCCATTG------TTGGCAGCAGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGT----------------------------------------------------------CGTC
droSec2 scaffold_0:3718268-3718512 - AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCG------------------AA-----AACTTAAATATAT-AGA---------------------------------------------------------------------AGA----------------------------CATCC------------ATTGCCACCCACAACTGGCTAATT--GAAGTTCACGTGAT---TCTCT-GTGTT-----T------TCGGA--TTCCT-TTCGAAATTGCCTTTAT---TATTTAC--TCACATCTG--TCATTT-GCC---------------------TCCATTG------TTGGCAGCAGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGT----------------------------------------------------------CGTC
dm3 chr3L:11520088-11520331 - AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCT------------------AA-----AACTTGAATATAT---------------------------------------------------------------------------A----------------------------CATAC------------ATTACCACCCACAATTGGCTAATT--GAACTTCACGTGAT---TCTCT-GTGTT-----TT-----TCGGA--TTCCT-TTCGAAATTGCCTTTATTATTATTTAC--TCACATCTG--TCATTT-GCC---------------------TCCATTG------TTGGCAGCAGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGT----------------------------------------------------------CGTC
droEre2 scaffold_4784:11520552-11520836 - AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCAATGTCCCAAGT-TGATTCAA-----AACCTAATAGTATAAGA---------------------------------------------------------------------AC------------TTTACTCCTGCGAACGATACCCGTTGCCATTCACACTCACACTCACACCTCGCTAATT--GAACCTCACGTGAT---TTTCG-GTGCT-----T------TCTGA--TTTCT-TTCCAAATTGCCTTT------ATTTAC--TCACATCTG--TCATTT-GCC---------------------TCCATTG------TTGGC---AGCCTTATCGTG---TGATTTACAAATGAGTTTAACGAGCCC----------------------------------------------------------CGTC
droYak3 3L:11554409-11554659 - GGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTATCT------------------AAACTGAAACTTAAAAATATAAGA---------------------------------------------------------------------ATA----------------------------CATTC------------ATTGCCACCCACTCCTTGCCAATT--GAAGTGCACGTGAT---TTTGCGGTGTT-----T------TCGGA--TTTCA-TTCCAAATTGCCTCT------ATTTAC--TCACATCTGTCTCATTT-GCC---------------------TCCATTG------TTGCTGGCAGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGT----------------------------------------------------------CGTC
droEug1 scf7180000409711:3399270-3399547 - AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTAA------------------AA-----AG----------T-AGAAGATACTTCTTATATAATTTGGTTGATTAAGTTC----TTAC-TGAT------------------------------------------------------------------TAACATTTTAACCCACACCTTGCTGTTT--GAACTTCCCCTGCTATTTCCCT---------------------GAGTTTTCT-TTTCAAATTGCCATT------ATTTAC--CCACATCTG--TCATTT-GCC---------------------CCTATTGTGTGTGTTGGCT--GGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCTACTG--------------------------------------------------AGCGATGTC
droBia1 scf7180000302193:55749-55911 + C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCCTACCTTGTCATTT--AAACTTCACGTGAC---TTTCC-ATTTA-----T------TCCGA-GTTTCC-TTTCAAATTGCCTTT------ATTTAC--TCCCATCTG--TCATTT-GTC---------------------CCTATTG------TTGCC---AGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGGCTGGCCC-------------------------------------------CA-AGCGCTGTC
droTak1 scf7180000415349:98085-98390 + AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTAC------------------AA-----GATTCTA------------------AATATATAA--------ATTAAGATCAAACTTACATGATTACACACTTTATAATAGTGAAAATACAGTCATAACCTTTTTCCCTG-----------T------------ATTATCACACACACCTTCCCATTT--GAACTTCACGTGAT---TCTCC---------------------GA-TTTTCT-TTCCAAATTGCCTCT------ATTTAC--CCACATCTG--TCATTT-GTC---------------------CCCATTG------TCGGC---AGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGGCTGGCCC-------------------------------------------CA-AGCAATGTC
droEle1 scf7180000490564:2465524-2465772 - AGTCGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCCATTTCAAATGT-TTATT-------------AAT--TGTAAG----------------------------------------------------------------------------------------------------------------------ATTTGCTCATACAATTAGCTATTT--GAAGTTCACGTGAT---TTTCT---------------------GA-TTTCCCTTTCAAAAGTGCTTTT------ATTGAC--TCACATCTGTGTCATTT-GTT---------------------CCTATTG------TTGGCA--AGCTTTATCGTG---TGATTTACAAATGACTTTAACGAGCGACTGGCCG-------------------------------------------CAAAGCGATGTC
droRho1 scf7180000779504:49099-49408 + AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTGTAATTTCATAAGTATCAA--TA-----GC----------T-AGAAACAAATTCTAAAAAAATATGGCAA-----------------------------CTTAAAGAAATGA--ATACTGCCATAAC-------------------------------------CACCACCCCCAATTTACGATTTACAAACTTCACGTGAC---TTTCT-GTATTCTGTAT------TCTGA-TTTCCA-TTCCAAATTGCTTTC------ATTCACTCTCACATCTG--TCATTT-GTC---------------------CCTATTG------TTGCC---AGCTTTATCGTG---CGATTTACAAATGACTTTAACGAGCGACTGGCCT-------------------------------------------CA-AGCGATGTC
droFic1 scf7180000454113:3181509-3181670 + A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCACACCTTGCTATTT--GAACTTCACGTGAT---GTTTT-GTGTT-----T------GCTGA-TTTTCT-TTTCAAATTGCCTTT------ATTTAC--CCACATCTG--TCATTT-GCC---------------------TCCATTG------TTGGC---AGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGGCTGGCCC-------------------------------------------CA-AGCGATTTC
droKik1 scf7180000302391:1311429-1311560 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--AAAATTCACGTGAT---TTTCC-TTACT-----TTTCTCGTTCGA-TTTTGC-TTTCAAATTGCTTTT------ATTTAC--C-------------------T---------------------CCCATTG------TTATTGTCAGCTTTATCGTG---TGATTTACAAATGAGTTTAACTAGCGGGTG--------------------------------------------------AGTG-CCTG
droAna3 scaffold_13337:5805675-5805831 - AGTGGATCTACCAGCTGGCTTGGACTACAATGAATGGCTGGCGTCACACAGTAGGTTATAATGTT------------------------------------------------------------------------------------------------------------------ATAGTCT---------------------------------------------------CTTACT--GACTTTCATGTGAT---TTTTG-ATGAT-----T------T-G-----------------------------------------------------------------------------------TATTG------T-------GGCTTTATCGTGGGGTGATTTACAAATGAGCTTAACGAGCTG----------------------------------------------------------CGGC
droBip1 scf7180000396371:1133714-1133769 - AGTGGATCTTCCAGCTGGTTTGGATTACAATGAATGGCTAGCGTCACATAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XR_group6:10153107-10153310 + GC---------------------------------------------------------------------------------------------------------------------------AA-----------------------------CTCAAAGT-------------TTGCAATCT---------------------------------------------------TTTGT---------------------------TGTT-----T------TCGAA--TTGG------------TTTTG------ATTTAT--TCACGTCTA--CCATTT-GGCATTTGGCTGCGCTATTAGGCGGCTATTG------TTGCC-CCAGCTTTATCGTG---TGATTTATAAATGAGTTTAACGAGCCACAGTCCCACAGTCCCACAGCCAGAGGCACAGGCACAGGCACAGCCGTAGCCAGAGCG-CGTC
droPer2 scaffold_20:85355-85410 + GGTGGATCTACCCGCAGGCTTGGACTACAATGAATGGCTGGCGTCACACAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004511:2026930-2026985 - AGTGGATCTTCCAGCTGGTTTGGATTACAATGAGTGGCTAGCATCACATAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:23734338-23734393 - TGTCGATCTTCCAGCTGGCTTGGACTACAATGAATGGCTAGCCTCACACAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:18357458-18357513 - TGTCGATCTTCCAGCTGGCTTGGACTACAATGAATGGCTAGCCTCACACAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:13931766-13931834 + TGTCGATCTTCCAGCTGGCTTGGATTACAATGAATGGCTGGCCTCACACAGTAAGTGCCC------------------AA-----AACTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCG------------------AA-----AACTTAAGTATAT-AGA---------------------------------------------------------------------A------------------------GAACGACATCC------------ATTACCACCCACAACTGGCTAATT--GAAGTTCACGTGAT---TCTCT-GTGTT-----T------TCGGA--TTCCT-TTCGAAATTGCCTTTAT---TATTTAC--TCACATCTG--TCATTTTGCC---------------------TCCATTG------TTGGCAGCAGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGT----------------------------------------------------------CGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................CTACAATGAATGGCTAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300300000000000000
.......CTTCCAGCTGGTTTGGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
............AGCTGGTTTGGACTACAATGAATGGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000000000020000
...................TTGGACTACAATGAATGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
....................TGGACTACAATGAATGGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTATCGTG---TGATTTACA................................................................................1811.00100000100000000000
...............TGGTTTGGACTACAATGAATGGCTAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
................GGTTTGGACTACAATGAATGGCTAGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
................................................................................................................................................................................................................................................ATT--GAAGTTCACGTGAT---TCTCT-GT................................................................................................................................................................................................................................2411.00100010000000000000
................GGTTTGGACTACAATGAATGGCTAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.............GCTGGTTTGGACTACAATGAATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..................TTTGGACTACAATGAATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.......CTTCCAGCTGGTTTGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
..........................ACAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000001000000000
droSec2
AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCG------------------AA-----AACTTAAATATAT-AGA---------------------------------------------------------------------AGA----------------------------CATCC------------ATTGCCACCCACAACTGGCTAATT--GAAGTTCACGTGAT---TCTCT-GTGTT-----T------TCGGA--TTCCT-TTCGAAATTGCCTTTAT---TATTTAC--TCACATCTG--TCATTT-GCC---------------------TCCATTG------TTGGCAGCAGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGT----------------------------------------------------------CGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....GATCTTCCAGCTGGTTTGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.......................ACTACAATGAATGGCTAGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................TTGGACTACAATGAATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
..........................ACAATGAATGGCTAGCGTCACAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...............................GAATGGCTAGCGTCACACACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
........................CTACAATGAATGGCTAGCGTCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
............................................................................................................................................................................................................................................................................GTGTT-----T------TCGGA--TTCCT-TTCG................................................................................................................................................................................................2011.0010100
........................CTACAATGAATGGCTAGCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
dm3
AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCT------------------AA-----AACTTGAATATAT---------------------------------------------------------------------------A----------------------------CATAC------------ATTACCACCCACAATTGGCTAATT--GAACTTCACGTGAT---TCTCT-GTGTT-----TT-----TCGGA--TTCCT-TTCGAAATTGCCTTTATTATTATTTAC--TCACATCTG--TCATTT-GCC---------------------TCCATTG------TTGGCAGCAGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGT----------------------------------------------------------CGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................TTGGACTACAATGAATGGCTAGCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACTACAATGAATGGCTAGCGTCACACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000001000000000000000000000000000010000
.......................ACTACAATGAATGGCTAGCGTCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000100100000
......................GACTACAATGAATGGCTAGCGTCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000001000
.....................GGACTACAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000001000000000
....................TGGACTACAATGAATGGCTAGCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................GACTACAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000
........................CTACAATGAATGGCTAGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTGGACTACAATGAATGGCTAGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000
...............TGGTTTGGACTACAATGAATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTGGACTACAATGAATGGCTAGCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................TGGACTACAATGAATGGCTAGCGTCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................CTACAATGAATGGCTAGCGTCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000
........................CTACAATGAATGGCTAGCGTCACACACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................GGACTACAATGAATGGCTAGCGTCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......................GACTACAATGAATGGCTAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTGGACTACAATGAATGGCTAGCGTAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTGGACTACAATGAATGGCTAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......TCTTCCAGCTGGTTTGGACTACAATGAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTGGTTTGGACTACAATGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................ACAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............TGGTTTGGACTACAATGAATGGCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............GCTGGTTTGGACTACAATGAATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATGAATGGCTAGCGTCACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CATCTG--TCATTT-GCC---------------------TCCATT.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTGGATCTTCCAGCTGGTTTGGACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTGGACTACAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................TACAATGAATGGCTAGCGTCACACACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................TTTGGACTACAATGAATGGCTAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........CCAGCTGGTTTGGACTACAATGAATGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCTTCCAGCTGGTTTGGACTACAATGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGGTTTGGACTACAATGAATGGCTAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................GA--TTCCT-TTCGAAATTGCCT.......................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................CTACAATGAATGGCTAGCGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTGGACTACAATGAATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATGAATGGCTAGCGTCACACACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................GGTTTGGACTACAATGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAGCTTTATCGTG---TG.......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAGCTGGTTTGGACTACAATGAATGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................TGGACTACAATGAATGGCTAGCGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGTG---TGATTTACAAATGAGTTTAA.....................................................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTGGACTACAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTTAACGAGCGT----------------------------------------------------------CGTG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTGGACTACAATGAATGGCTAGCGTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TACAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGTG---TGATTTACAAATGAGTTTA......................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGTGGATCTTCCAGCTGGTTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GACTACAATGAATGGCTAGCGTCACAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......TCTTCCAGCTGGTTTGGACTACAATGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGGACTACAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................CTACAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........CAGCTGGTTTGGACTACAATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACTACAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAATGAATGGCTAGCGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................ACAATGAATGGCTAGCGTCACACAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGGTTTGGACTACAATGAATGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCAATGTCCCAAGT-TGATTCAA-----AACCTAATAGTATAAGA---------------------------------------------------------------------AC------------TTTACTCCTGCGAACGATACCCGTTGCCATTCACACTCACACTCACACCTCGCTAATT--GAACCTCACGTGAT---TTTCG-GTGCT-----T------TCTGA--TTTCT-TTCCAAATTGCCTTT------ATTTAC--TCACATCTG--TCATTT-GCC---------------------TCCATTG------TTGGC---AGCCTTATCGTG---TGATTTACAAATGAGTTTAACGAGCCC----------------------------------------------------------CGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................TACAATGAATGGCTAGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...................TTGGACTACAATGAATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.............................ATGAATGGCTAGCGTCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
..TGGATCTTCCAGCTGGTTTGGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.....................GGACTACAATGAATGGCTAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.................GTTTGGACTACAATGAATGGCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
........................CTACAATGAATGGCTAGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...................TTGGACTACAATGAATGGCTAGCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
droYak3
GGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTATCT------------------AAACTGAAACTTAAAAATATAAGA---------------------------------------------------------------------ATA----------------------------CATTC------------ATTGCCACCCACTCCTTGCCAATT--GAAGTGCACGTGAT---TTTGCGGTGTT-----T------TCGGA--TTTCA-TTCCAAATTGCCTCT------ATTTAC--TCACATCTGTCTCATTT-GCC---------------------TCCATTG------TTGCTGGCAGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGT----------------------------------------------------------CGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...GGATCTTCCAGCTGGTTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
................GGTTTGGACTACAATGAATGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
......................GACTACAATGAATGGCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000
...................TTGGACTACAATGAATGGCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
............AGCTGGTTTGGACTACAATGAATGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
droEug1
AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTAA------------------AA-----AG----------T-AGAAGATACTTCTTATATAATTTGGTTGATTAAGTTC----TTAC-TGAT------------------------------------------------------------------TAACATTTTAACCCACACCTTGCTGTTT--GAACTTCCCCTGCTATTTCCCT---------------------GAGTTTTCT-TTTCAAATTGCCATT------ATTTAC--CCACATCTG--TCATTT-GCC---------------------CCTATTGTGTGTGTTGGCT--GGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCTACTG--------------------------------------------------AGCGATGTCSizeHit CountTotal NormTotal
No Reads
droBia1
C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCCTACCTTGTCATTT--AAACTTCACGTGAC---TTTCC-ATTTA-----T------TCCGA-GTTTCC-TTTCAAATTGCCTTT------ATTTAC--TCCCATCTG--TCATTT-GTC---------------------CCTATTG------TTGCC---AGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGGCTGGCCC-------------------------------------------CA-AGCGCTGTCSizeHit CountTotal NormTotal
No Reads
droTak1
AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTAC------------------AA-----GATTCTA------------------AATATATAA--------ATTAAGATCAAACTTACATGATTACACACTTTATAATAGTGAAAATACAGTCATAACCTTTTTCCCTG-----------T------------ATTATCACACACACCTTCCCATTT--GAACTTCACGTGAT---TCTCC---------------------GA-TTTTCT-TTCCAAATTGCCTCT------ATTTAC--CCACATCTG--TCATTT-GTC---------------------CCCATTG------TCGGC---AGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGGCTGGCCC-------------------------------------------CA-AGCAATGTCSizeHit CountTotal NormTotal
No Reads
droEle1
AGTCGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTTCCATTTCAAATGT-TTATT-------------AAT--TGTAAG----------------------------------------------------------------------------------------------------------------------ATTTGCTCATACAATTAGCTATTT--GAAGTTCACGTGAT---TTTCT---------------------GA-TTTCCCTTTCAAAAGTGCTTTT------ATTGAC--TCACATCTGTGTCATTT-GTT---------------------CCTATTG------TTGGCA--AGCTTTATCGTG---TGATTTACAAATGACTTTAACGAGCGACTGGCCG-------------------------------------------CAAAGCGATGTCSizeHit CountTotal NormTotal
No Reads
droRho1
AGTGGATCTTCCAGCTGGTTTGGACTACAATGAATGGCTAGCGTCACACAGTAAGTTGTAATTTCATAAGTATCAA--TA-----GC----------T-AGAAACAAATTCTAAAAAAATATGGCAA-----------------------------CTTAAAGAAATGA--ATACTGCCATAAC-------------------------------------CACCACCCCCAATTTACGATTTACAAACTTCACGTGAC---TTTCT-GTATTCTGTAT------TCTGA-TTTCCA-TTCCAAATTGCTTTC------ATTCACTCTCACATCTG--TCATTT-GTC---------------------CCTATTG------TTGCC---AGCTTTATCGTG---CGATTTACAAATGACTTTAACGAGCGACTGGCCT-------------------------------------------CA-AGCGATGTCSizeHit CountTotal NormTotal
No Reads
droFic1
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCACACCTTGCTATTT--GAACTTCACGTGAT---GTTTT-GTGTT-----T------GCTGA-TTTTCT-TTTCAAATTGCCTTT------ATTTAC--CCACATCTG--TCATTT-GCC---------------------TCCATTG------TTGGC---AGCTTTATCGTG---TGATTTACAAATGAGTTTAACGAGCGGCTGGCCC-------------------------------------------CA-AGCGATTTCSizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--AAAATTCACGTGAT---TTTCC-TTACT-----TTTCTCGTTCGA-TTTTGC-TTTCAAATTGCTTTT------ATTTAC--C-------------------T---------------------CCCATTG------TTATTGTCAGCTTTATCGTG---TGATTTACAAATGAGTTTAACTAGCGGGTG--------------------------------------------------AGTG-CCTGSizeHit CountTotal NormTotal
No Reads
droAna3
AGTGGATCTACCAGCTGGCTTGGACTACAATGAATGGCTGGCGTCACACAGTAGGTTATAATGTT------------------------------------------------------------------------------------------------------------------ATAGTCT---------------------------------------------------CTTACT--GACTTTCATGTGAT---TTTTG-ATGAT-----T------T-G-----------------------------------------------------------------------------------TATTG------T-------GGCTTTATCGTGGGGTGATTTACAAATGAGCTTAACGAGCTG----------------------------------------------------------CGGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................AATGAATGGCTGGCGTCACACACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..............................TGAATGGCTGGCGTCACACACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.......CTACCAGCTGGCTTGGACTACAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...GGATCTACCAGCTGGCTTGGACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.....................GGACTACAATGAATGGCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
....GATCTACCAGCTGGCTTGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................GACTACAATGAATGGCTGGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.....................GGACTACAATGAATGGCTGGCGTCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
................................AATGGCTGGCGTCACACACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droBip1
AGTGGATCTTCCAGCTGGTTTGGATTACAATGAATGGCTAGCGTCACATAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GC---------------------------------------------------------------------------------------------------------------------------AA-----------------------------CTCAAAGT-------------TTGCAATCT---------------------------------------------------TTTGT---------------------------TGTT-----T------TCGAA--TTGG------------TTTTG------ATTTAT--TCACGTCTA--CCATTT-GGCATTTGGCTGCGCTATTAGGCGGCTATTG------TTGCC-CCAGCTTTATCGTG---TGATTTATAAATGAGTTTAACGAGCCACAGTCCCACAGTCCCACAGCCAGAGGCACAGGCACAGGCACAGCCGTAGCCAGAGCG-CGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GGTGGATCTACCCGCAGGCTTGGACTACAATGAATGGCTGGCGTCACACAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................GAATGGCTGGCGTCACACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.................GCTTGGACTACAATGAATGGCTGGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.............................ATGAATGGCTGGCGTCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...GGATCTACCCGCAGGCTTGGACTACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..................CTTGGACTACAATGAATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................GACTACAATGAATGGCTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
droWil2
AGTGGATCTTCCAGCTGGTTTGGATTACAATGAGTGGCTAGCATCACATAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................TTGGATTACAATGAGTGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............TGGTTTGGATTACAATGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.......................ATTACAATGAGTGGCTAGCATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
droVir3
TGTCGATCTTCCAGCTGGCTTGGACTACAATGAATGGCTAGCCTCACACAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................AATGAATGGCTAGCCTCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
................GGCTTGGACTACAATGAATGGCTAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................CAATGAATGGCTAGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000010000
...............TGGCTTGGACTACAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15120.253000000000000000000000000000000000000000000000011100000000000000
..............CTGGCTTGGACTACATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................17150.071000000000000000000000000000000000000000000000000000000000010000
................GGCTTGGACTACAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.051000000000000000000000000000000000000000000000000000000000010000
droMoj3
TGTCGATCTTCCAGCTGGCTTGGACTACAATGAATGGCTAGCCTCACACAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................CTTGGACTACAATGAATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............AGCTGGCTTGGACTACAATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................GGCTTGGACTACAATGAATGGCTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
droGri2
TGTCGATCTTCCAGCTGGCTTGGATTACAATGAATGGCTGGCCTCACACAGTAAGTGCCC------------------AA-----AACTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 06:43 PM