ID:dsi_15633 |
Coordinate:3l:7875260-7875324 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3l_7874752_7875259_+]; exon [3l_7873907_7875259_+]; CDS [3l_7875325_7875449_+]; exon [3l_7875325_7875449_+]; intron [3l_7875260_7875324_+]
No Repeatable elements found
| ##################################################-----------------------------------------------------------------################################################## TAACAACGATCTGTTCGCCTTCCCCAAGGACATGTCGCCTGTGATGAGTGGTAAGCGATGGGTATTTCTAAGATATTTTTTCGAATTTAGTTTGAAATACCTATTTTTCCAATAGAACACTGCCACTCGCCTATGTTCACCGACCTATCATCAGCTAACAGCAAT **************************************************......((((((((((((.((...((((....))))....)).))))))))))))..........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M025 embryo |
SRR553488 RT_0-2 hours eggs |
M024 male body |
SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
M023 head |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................GGACATGTCGCCTGTGATG....................................................................................................................... | 19 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..........................................GATGAGTGCTAAGTGTTGGG....................................................................................................... | 20 | 3 | 11 | 1.36 | 15 | 0 | 0 | 13 | 0 | 0 | 2 |
| ........................CAAGGACATGTCGCCTGTGATGAG..................................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .....................TCCCAAGGACATGTCGCCTGTGA......................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................................................................................CTGCAACTCGCCTACGT............................. | 17 | 2 | 9 | 0.67 | 6 | 0 | 6 | 0 | 0 | 0 | 0 |
| ..........................................GATGAATGCTAAGCGTTGGG....................................................................................................... | 20 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .............................................................................................................CAGTAGAACACTGCC......................................... | 15 | 1 | 7 | 0.29 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ......................................................................................................................GCTGCAACTCGCCTACGT............................. | 18 | 3 | 20 | 0.20 | 4 | 0 | 4 | 0 | 0 | 0 | 0 |
| .......................................TGTGATGTGTAGTAAGGGA........................................................................................................... | 19 | 3 | 15 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ......................................................................................................................GCTGCAACTCGCCTACGTT............................ | 19 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
|
ATTGTTGCTAGACAAGCGGAAGGGGTTCCTGTACAGCGGACACTACTCACCATTCGCTACCCATAAAGATTCTATAAAAAAGCTTAAATCAAACTTTATGGATAAAAAGGTTATCTTGTGACGGTGAGCGGATACAAGTGGCTGGATAGTAGTCGATTGTCGTTA
**************************************************......((((((((((((.((...((((....))))....)).))))))))))))..........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................AGTGGCTGAAGAGTAGTCGT......... | 20 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ..............................................................................................................................AGCGCATACCAGTGGCT...................... | 17 | 2 | 7 | 0.14 | 1 | 1 | 0 | 0 |
| ..............................................................................AAAGCTTAAATCAAA........................................................................ | 15 | 0 | 10 | 0.10 | 1 | 0 | 1 | 0 |
| ...................................................................................................................................................AGTAGTCGCTTGTCG... | 15 | 1 | 11 | 0.09 | 1 | 1 | 0 | 0 |
| .................................................................................................ATGGATAAAAAGATTA.................................................... | 16 | 1 | 13 | 0.08 | 1 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:30 AM