ID:

dsi_15609

 Coordinate:

2r:19074861-19075010 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.0 -16.0 -16.0 -16.0

Flybase annnotation

CDS [2r_19075011_19075113_+]; exon [2r_19075011_19075289_+]; intron [2r_19074440_19075010_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAATATGTGAAAACATTGTTATCTCAACTGGAACTGGAGTTGAGTCAGATAACGAATCCGACTGGAAAGGGGGTGAAAGCAAGCAAACTGACTGATATCGGGCTGTAGACGTCGTAAAGGCCAATTCGGAATTAGTGCTCTGACTAATAGTTTAATTCCCCGAACATATCTAATCGACTTGTTTTCCACTCTATCCACAGCTGCTGGCCGTGCGTGTGTCTTCCGTACTGCATGGACTCCTGCCAGAATG
******************************************************.........((.....((((............(((((((((.....((((....((...))...))))...))))..)))))))))...))********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M024
male body		 M025
embryo
 M053
female body
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...........................................................................................................................................................................................................................CTTCCGTACTGCATGGACTCCTGCCAGA... 28 0 1 4.00 4 0 2 2 0 0 0 0 0 0 0
...........................................................................................................................ATTCGGAATTAGTGCTCTGACT......................................................................................................... 22 0 1 3.00 3 0 1 2 0 0 0 0 0 0 0
......................................................AATCCGACTGGAAAGGGGGTG............................................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTTCCGTACTGCATGGACTCCT......... 22 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
.......................................TTGAGTCAGATAACGAAT................................................................................................................................................................................................. 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..........................................................................................................................................................................TAATCGACTTGTTTTCCACTC........................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTCCGTACTGCATGGACTCCTGCCAGAA.. 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
......................................................................................................................GGCCAATTCGGAATTAGTGCTCTGAC.......................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
....................................................................................................................AAGGCCAATTCGGAATTAGTGCTC.............................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............ATTGTTATCTCAACTGGAACG....................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................CACAGCTGCTGGCCGTGCGTG.................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................GGGTGAAAGCAAGCAAACTG................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................AGCTGCTGGCCGTGCGTGTG................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGCTGCTGGCCGTGCGTGTGTCTT............................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................GAGTTGAGTCAGATAACGAAT................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTTCCACTCTATCCACAGCTG............................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTCCGTACTGCATGGACTCCT......... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTGTGTCTTCCGTACTGCATGGACTCCT......... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................CAAACTGACTGATATCGGGCT.................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTCCGTACTGCATGGACTCCTGC....... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................CTGATATCGGGCTGTAGA............................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................TATCGGGCTGTAGACGTCGTA...................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................TAACGAATCCGACTGGAAAGGGGGT................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGCATGGACTCCTGCCAGAAT. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................AAACTGACTGATATCGGGCTGTAGA............................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TTGTTTTCCACTCTATCCACAGCTG............................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................AAGCAAACTGACTGATATCGGGCT.................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................AATCCGACTGGAAAGGGGG................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ACTGCATGGACTCCTGCCAGAATG 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................AATTCGGAATTAGTGCTCTGACT......................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GTGTCTTCCGTACTGCATGGACT............ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTGTCTTCCGTACTGCATGGACTCC.......... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................ATCTCAACTGGAACTGGAGTTG................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................GAATCCGACTGGAAAGGGGGT................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTTCCGTACTGCATGGACT............ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................TAAAGGCCAATTCGGAATTAGT.................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................AAAGGCCAATTCGGAATTAGTGCTC.............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................AAGCAAGCAAACTGACTGATATCGGGCC.................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TCCACAGCTGCTGGCCGTGCGTGTG................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................GTAAAGGCCAATTCGGAATTA.................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
........................................................TCCGACTGAAAAGGGGGTGAAAGCAAGC...................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGTACTGCATGGACTCCTGC....... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................TGATATCGGGCTGTAGACGTC......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................AAACTGACTGATATCGGGCTG................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................TCCGACTGGAAAGGG................................................................................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GTACTGCATGGACTCCTGC....... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ACTGCATGGACTCCTGCCAGG... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................CAAGCAAACTGACTGATATCGGGC................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................TTATCTCAACTGGAACTGGAGTTGAGT............................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................GCCAATTCGGAATTAGTGCTC.............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GCTGCTGGCCGTGCGTGTG................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTCGGAATTAGTGCTCTGACTAATAGT................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................TCTTCCGTACTGCATGGACTCCTGC....... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................CATCTGCTGGCCGTGCGTGTGTCTTCC.......................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................ATCTCAACTGGAACTGGAGTT................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GTCTTCCGTACTGCATGGACTCCTGCC...... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................TCTGACTAATAGTTTAATTCCCCGAACA.................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.....TGTGAAAACATCGTCATCT.................................................................................................................................................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................TCGGGACTAGTGATCTGAC.......................................................................................................... 19 3 6 0.33 2 0 0 0 0 0 2 0 0 0 0
............................................................................................................ACGTCGTAAAGCCCC............................................................................................................................... 15 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................CGGGACTAGTGATCTGAC.......................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ATTATACACTTTTGTAACAATAGAGTTGACCTTGACCTCAACTCAGTCTATTGCTTAGGCTGACCTTTCCCCCACTTTCGTTCGTTTGACTGACTATAGCCCGACATCTGCAGCATTTCCGGTTAAGCCTTAATCACGAGACTGATTATCAAATTAAGGGGCTTGTATAGATTAGCTGAACAAAAGGTGAGATAGGTGTCGACGACCGGCACGCACACAGAAGGCATGACGTACCTGAGGACGGTCTTAC
*********************************************************************************************************.........((.....((((............(((((((((.....((((....((...))...))))...))))..)))))))))...))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 M023
head
.......................................................TAGGCTGACCTTTCCCCCACT.............................................................................................................................................................................. 21 0 1 4.00 4 2 0 2 0 0 0 0 0 0
......................................................TTAGGCTGACCTTTCCCCCAC............................................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.....................................................CTTAGGCTGACCTTTCCCCCA................................................................................................................................................................................ 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.....................AGAGTTGACCTTGACCTCAACTCAGTCT......................................................................................................................................................................................................... 28 0 1 2.00 2 0 0 0 0 1 0 1 0 0
.............................................GTCTATTGCTTAGGCTGACCT........................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................GTGAGATAGGTGTCGA................................................ 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................CGACATCTGCAGCATTTCCCG................................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................CGTTCGTTTGACTGACTATAG....................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................TAAGGGGCTTGTGTAGATTAG........................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0
............................................CGTCTATTGCTTAGGCTGACCT........................................................................................................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................GCACACAGAAGGCATGACGTA................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................TGTATAGATTAGCTGAACAAA.................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................AGCTGAACAAAAGGTGAGATA........................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ACACAGAAGGCATGACGTACCTGAG........... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................AGGTGAGATAGGTGTCGAC............................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CCGGCACGCACACAGAAGGC......................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................................................................................ATCTGCAGCATTTCCGGTTAAGCCT........................................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................AAAGTTGGGATAGGTGTCGA................................................ 20 2 2 0.50 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................GGCTTGTATCGATGAGC.......................................................................... 17 2 2 0.50 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................GGCTTGTATCGATGAG........................................................................... 16 2 14 0.43 6 0 0 0 0 0 0 6 0 0
.............................................................................................CTAGAGCCTGACATCTTCAG......................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................GTCGTACCTGAGGACG....... 16 1 9 0.22 2 0 2 0 0 0 0 0 0 0
............................AGCTTGACCTCAGCTCAGT........................................................................................................................................................................................................... 19 2 5 0.20 1 0 0 0 1 0 0 0 0 0
.............................................................................................CTAGAGCCTGACATCTG............................................................................................................................................ 17 2 5 0.20 1 0 0 0 0 0 1 0 0 0
.............................................................................................CTACAGCCTGACATCTTCAG......................................................................................................................................... 20 3 6 0.17 1 0 0 0 1 0 0 0 0 0
............................................................................................ACTAGAGCCTGACATCT............................................................................................................................................. 17 2 12 0.17 2 0 0 0 1 0 1 0 0 0
.....................................................................................................................................................................................................................CACACAGAGGGCATGTCAT.................. 19 3 7 0.14 1 0 0 0 0 1 0 0 0 0
...........................................................................................GACTACAGCCTGACATC.............................................................................................................................................. 17 2 8 0.13 1 0 0 0 0 0 1 0 0 0
.............................................................................................CTACAGCCTGACATCTG............................................................................................................................................ 17 2 9 0.11 1 0 0 0 0 0 1 0 0 0
...........................................................................................GACTAGAGCCTGACATCTT............................................................................................................................................ 19 3 9 0.11 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................TTGTATCGATTAGCAGAGC..................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 1
.............................................................................................CTAGAGCCTGACATCT............................................................................................................................................. 16 2 20 0.10 2 0 0 0 0 0 0 2 0 0
...................................................................................................................................................................................................................................GTCGTACCTGAGGACTG...... 17 2 13 0.08 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................AGGTGTGATAGGTGT................................................... 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:19074811-19075060 + dsi_15609 TA-------------ATATGTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACGAATC----CGACT----GGAAAG-----GGG-GTGAAA----G----CAAGCAA-----------------ACTGA--------CT--------------GAT--ATCGGGCTGTAGACG------------------TCGTAAAGG-CCAATTCGGAATTAGTGC--------------------------------------------------------------------TCTGACTAATAGTTTAATTCCCCGAA---C---------------A------------TATCTAATCGA------------CTT-------GTTTTCC-ACTCT--ATCC-ACAGCTGCTGGCCGTGCGTGTGTCTTCCGTACTGCATGGACTCCTGCCAGAATG
droSec2 scaffold_9:1848078-1848327 + TA-------------ATATGTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACGAATC----CGACT----GGAAAG-----GGG-GTGAAA----G----CAAGCAA-----------------ACTGA--------CT--------------GAT--ATCGGGCTGTAGACG------------------TTGTAAAGG-CCAATTTGGAATTAGTGC--------------------------------------------------------------------TCTGACTAATAGTTTAATTCCCCGAA---C---------------A------------TATCTAATAGA------------CTT-------GTTTTCC-ACTCT--ATCC-ACAGCTGCTGGCCGTGCGTGTGTCTTCCGTACTGCATGGACTCCTGCCAGAATG
dm3 chr2R:18546224-18546477 + TA-------------ATATGTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACGAATC----CGAGT----GGAAAG---ACGGG-GTGAAA----G----CAAGCAA-----------------ACTGA--------CT--------------GAT--TACGGCCTGTAGACG------------------TCGTAAAGG-CCAATTCGGAATTAGTGC--------------------------------------------------------------------TCTGACTAATAGTTTAATTCCCCGAA---C---------------T------------TATCTAATCGA------------TTC-------GTTTTCC-ACTCTATCCAC-ACAGCTGCTGGCCGTGCGTATGCCTACCTTACTGCATGGACTCCTGCCAGAATG
droEre2 scaffold_4845:7409967-7410212 - der_1061 T------------------GTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACGAACG----GGCTT----GGAAGT-----GTG-GTGAAA----G----CAAGCA------------------ACCGA--------CT--------------GAT--ATTGGCGTGTAGACG------------------TCGTAAAGG-CCAATTCGGAATTAGGGC--------------------------------------------------------------------TCTGACTAATAGCTTAATCGCCCGAG---C---------------ATACG------TGTATCTAATCGA------------TCT-----------TCC-ACTCT--ATCC-ACAGTTGCTGGCCGTGCGTGTGTCTTCCGTACTGCATGGACTCCTGCCAGAATG
droYak3 2R:16008867-16009105 + dya_587 TG-------------ATACGTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACGAGTGGGGTGGCCT----GGAAAG-----GGG-GTGAAA----G----CAAGCAA-----------------ACTGA--------CT--------------GAT--ATC-------------------------------------AG-CCAATTCGGAATTAGAGT--------------------------------------------------------------------TCTGACTAATAGTTCAATTCCCCGAA---A---------------CTAAC--------CATCTAATCCA------------TCT-------CCTTTCC-ACTCC--ATCC-ACAGCTGCTGGCCCTGCGTGTGTCTGCCGTACTGCATGGACTCCTGCCAGAATG
droEug1 scf7180000409672:6479439-6479690 + CC-------------ATACTTGAAAACCAATGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACAAAAG----TGCCT----GCAATG-----GGG-CCGAAG----A----CAAGCAA-----------------ACTGG--------CT--------------AAA--ATTGGCCCTAGGGCG------------------TTGTACAGG-CCAATA-GGAATTAGTGT--------------------------------------------------------------------TCGAACTAATGAATTAATTCCCCGCA---C---------------T------------TATCTAATCGA------------TCT-------TTTTTAA-TCTAAATATTC-ACAGCTGCTGGCCGTGCGTGTGCCTTCCTTATTGCATGGACTCCTGCCAGAATG
droBia1 scf7180000302143:2106041-2106282 - GC-------------ATACTTGAAAA-CAATGTTATCTCAACTGGAAC---TGGAACTGGAGTTGAGTCAGATAACAAAGC----TGCCT----GCAATG-----GGG-CCAAAA----A----CAAGCCA-----------------ACCGA--------CT--------------GAA--ATTGGCCTGTTGAAG------------------TC------G-CCAAT--------AAATC--------------------------------------------------------------------TGTGACTAATGGATTAATTCCCCGAA---A---------------T------------TATCTAATTGA------------TCT-------TCTCTAA-TCTCC--ATCC-ACAGTTGCTGGCCTTGCGTCTGCCTTCCTTATTGCATGGATTCCTGCCAGAACG
droTak1 scf7180000415379:763720-763989 + CC-------------ATACTTGAAAA-CAATGTTATCTCAACTGGGACGGCT------GGAGTTGAGTCAGATAACAAAGCTAGCTGCCT----GGAATG-----GGGGCTAAAA----A----CAAGCAA-----------------ACTGA--------AT--------------GAA--ATTGGGCTGTAGACGTCGGC---CTTAG-GGCGTTGTATAGG-CCAATA-GGAATTAGTGC--------------------------------------------------------------------TCTGACTAATCGATTTATTCC-CGAA---C---------------T------------TATCTAATCGA------------TCT-------CTTCTAA-TCTCC--ATCC-ACAGTTGCTGGCCTTGCGTTTGTCTTCCCTACTGCATGGATTCCTGCCAGAATG
droEle1 scf7180000491022:133998-134255 + CC-------------ATACTTGAAAA-CAGTGTTATCTCAACTGGAAC---TGGAGTT-GAGTTGAGTGAGATAACAGAGC----TG----C-------------------GATA----GCAAACAAGTGA-----------------ACTGA--------CT--------------GAA--TTCGAGCTGCAAACGGCAGCCGTA--AG-AGCGT-TTATAGG-CCAATT-GGAATTAGCGC--------------------------------------------------------------------TCTGACTAATAAATTA-TCCCCGGAA---C---------------T------------TATCTAATCGA------------TTT-------TCACCAA-TCTTT--ATCC-ACAGCTGCTGGCCATGCGTCTGTCTTCCTTATTGCATGGACTCGTGCCAGAATG
droRho1 scf7180000768400:14331-14577 + CC-------------ATACTTGAAAA-CAATGTTATCGCAACTGGAAC---T------GGAGTAGAGGCAGATAACAAAGC----TG----C-------------------GATA----ACAGACAAGTGA-----------------ACTGA--------CT--------------GGA--ATCGGCCCGTAGACTGCCGC---C-------C-GTGTATAGG-CCAATT-GGAATTAGCGC--------------------------------------------------------------------TCTGACTAATAAACCAATTCCCCGAA---C---------------C------------TATCTAATCGA------------TCC-------CCACCAA-TCTTT--ATCC-ACAGCTGCTGGCCTTGCGTATGTCTTCCGTATTGCATGGACTCCTGCCAGAATG
droFic1 scf7180000454066:2491469-2491725 + ---------------ATACATGAATA-CAATGTTATCTCAACTGGAAC---T------GAAGTTGAGTCAGATAACAAAGC----A-------------------------GAAA----T----CAAGCAA----A----CTGGATGAAATGACTGGGTGAATGAA---------------------ACTGAAGGCAACTGT---TATAG-GGC-GTGTATAGG-CCAATT-GGAATTAGCCT--------------------------------------------------------------------TTTGACTTACGAATTAATTCCCCGAT---C---------------T------------TATCTAATCGA------------TCT-------TTCTTAA-TCTGC--ATTT-ACAGCTGCTGGCCATGCGTATGTCTGCCTTACTGTATGGATTCCTGCCAAAATG
droKik1 scf7180000302470:460794-461067 - ---------------ATACTAGAAAA-CATTGTTATCGCAACTGGAAC---T------GGAGTTGAGTCAGATAGCGTTG------G-CACT----GATGGGGCCGGG-CTGAAA----A----CAAGCAA-----------------GCCGA----GCGACTGGA-ACGGGT---------------------------GCCCTC--GGGGGCCTTGTATTGTACCAATA-GGAATTAGTGCGGCAATTAGG--------------------------------A------------------GGAACC-TCTGACAAACTAGCTAATT----------------------------AAA--------TAAGTAATCAATATTTGTTTCCATCT-------C-------TCTAT--A-TT-TTAGCTGCTGGCCTTGCGTTTGCTTGCCGTACTGCATGGACTCCTGCCAGAATG
droAna3 scaffold_13266:15494792-15495077 - GA-------------ATACTCGAAAT-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACAAACC----AG----T----GGTG-----GGA-CTGAAAAGTAGCCGAACAGAAA-----------------AGTGA----GAATTTCGAT-CTGGTAATAGAGGTAATAGGCTGT------------------------------GG-CCAATA-CAAATTAGTGCCGCAATTAGA--------------------------------A---------------------CCCTTTCAACTAATGAGTTAATTCCACAGAGGCC---------------A------------AATCTAATCAA------------TCTCCCCAATCTCTATATTTTCA--ATCC-ACAGTTGCTGGCCTTGCGTATGTCTGCCGTATTGTATGGATTCCTGCCAGAATG
droBip1 scf7180000396428:1339385-1339681 - TACATTATTGCCTGATTACTTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACAAAAC----AC----C----GATG-----GGG-CTGAAAAGTAGCAAAAAAGTAA-----------------AGTGA----GAATGTCGAT-CTGGTAACAGAG--AGTGGGCTGT------------------------------GG-CCAATA-CGAATTAGTGCCGCAATTAGA--------------------------------A---------------------CCCTTTAGACTAATGAGTTAATTCCCCAAAACCC---------------A------------AATGTAATCAA------------TCTCCACAATCTCTATTTTTTCA--ACCC-ACAGTTGCTGGCCTTGTGTGTGTCTGCCGTATTGTATGGACTCCTGCCAGAATG
dp5 3:4026870-4027169 + T-----------------------------TGTTATCGCCAGTGGAAA---T------GGAGTTGAGTCAGATAACAAATT----GA----CGAACA--------GCA-GTAGAA----A----TAGCCAGACACGTTTATTCCATCGATTGTCTGGACGACTGAA-CCGAAT--------------------------------T--AGGGGC------------------------------TCAAATACACCGACATATGTACTGCAATCACACTAATTGGGAGATATACCATTATTATGAAACACT------------------CTCCCCAAAACTCTACCCTTTCAGCTGTTTACTTTACTC-------ACTCTC------------CGT-------GTATCTC-TTTCT--ACCC-ATAGCTGCTGGCCCTGCGTGTGCCTGCCGTACTGCATGGATTCCTGTCAGAACG
droPer2 scaffold_2:4212890-4213204 + CA-------------ACACTCGAACG-GGTTGTTATCGCAAGTGGAAA---T------GGAGTTGAGTCAGATAACAAATT----GA----CGAACA--------GCA-GTAGAA----A----TAGCCAGACACATTTGTTCCACCGATTGTCTGGACGACTGAA-CCGAAT--------------------------------T--AGGGGC------------------------------TCAAATACACCGACATATGTACTGCAATCACACTAATTGGGAGATATACCATTATTATGAAAAACT------------------CTCCCCAAAACTCTACCCTTTCAGCTGTTTACTTTACTC-------ACTCTC------------CGT-------GTATCTC-TTTCT--ACCC-ATAGCTGCTGGCCCTGCGTGTGCCTGCCCTACTGCATGGATTCCTGTCAGAACG
droWil2 scf2_1100000004513:4081009-4081086 - TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------TCT-------CTCTCTC-TCTTT--GCCCAACAGTTGCTGGCCGTGCGTTTGTTTGCCATATTGTATGGACTCGTGTCAGAATG
droVir3 scaffold_12875:13743250-13743338 + AC-------------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGAAATGA---TT-------TTT-------TTCTTTT-ATTCC--CCTT-GCAGCTGTTGGCCTTGTGTTTGTGTGCCCTATTGCATGGACTCCTGCCAGAACG
droMoj3 scaffold_6496:9163750-9163821 + TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGCTCTGCC--CTTC-GCAGCTGCTGGCCCTGCGTTTGTGTGCCCTACTGCATGGACTCCTGCCAGAACG
droGri2 scaffold_15245:17499243-17499310 - TT-------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--CTCTC--TTCT-ACAGCTGTTGGCCGTGTGTTTGCCTGCCCTACTGCATGGATTCCTGCCAGAATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TA-------------ATATGTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACGAATC----CGACT----GGAAAG-----GGG-GTGAAA----G----CAAGCAA-----------------ACTGA--------CT--------------GAT--ATCGGGCTGTAGACG------------------TCGTAAAGG-CCAATTCGGAATTAGTGC--------------------------------------------------------------------TCTGACTAATAGTTTAATTCCCCGAA---C---------------A------------TATCTAATCGA------------CTT-------GTTTTCC-ACTCT--ATCC-ACAGCTGCTGGCCGTGCGTGTGTCTTCCGTACTGCATGGACTCCTGCCAGAATGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCGTACTGCATGGACTCCTGCCAGA...2814.00402200000000000000
....................................................................................................................................................................................................................................ATTCGGAATTAGTGC--------------------------------------------------------------------TCTGACT..............................................................................................................................................................2213.00301200000000000000
.............................................................................AATC----CGACT----GGAAAG-----GGG-GTG............................................................................................................................................................................................................................................................................................................................................................................2113.00300000000003000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCGTACTGCATGGACTCCT.........2212.00201100000000000000
..............................................................TTGAGTCAGATAACGAAT............................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TAATCGA------------CTT-------GTTTTCC-ACTC..............................................................2112.00202000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGTACTGCATGGACTCCTGCCAGAA..2812.00200200000000000000
..............................................................................................................................................................................................................................GG-CCAATTCGGAATTAGTGC--------------------------------------------------------------------TCTGAC...............................................................................................................................................................2612.00202000000000000000
............................................................................................................................................................................................................................AAGG-CCAATTCGGAATTAGTGC--------------------------------------------------------------------TC...................................................................................................................................................................2412.00200000000002000000
............................ATTGTTATCTCAACTGGAAC---G------..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................C-ACAGCTGCTGGCCGTGCGTG..................................2111.00100000000001000000
..........................................................................................................GG-GTGAAA----G----CAAGCAA-----------------ACTG....................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCTGGCCGTGCGTGTG................................2011.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCTGGCCGTGCGTGTGTCTT............................2411.00100000000001000000
...........................................................GAGTTGAGTCAGATAACGAAT............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTTCC-ACTCT--ATCC-ACAGCTG...............................................2111.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGTACTGCATGGACTCCT.........2111.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTCTTCCGTACTGCATGGACTCCT.........2811.00100010000000000000
................................................................................................................................CAA-----------------ACTGA--------CT--------------GAT--ATCGGGCT..............................................................................................................................................................................................................................................................................................2111.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGTACTGCATGGACTCCTGC.......2311.00101000000000000000
.................................................................................................................................................................CT--------------GAT--ATCGGGCTGTAGA.........................................................................................................................................................................................................................................................................................1811.00100100000000000000
...................................................................................................................................................................................T--ATCGGGCTGTAGACG------------------TCGTA................................................................................................................................................................................................................................................................2111.00100000000000001000
........................................................................TAACGAATC----CGACT----GGAAAG-----GGG-GT.............................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.................................................................................................................................AA-----------------ACTGA--------CT--------------GAT--ATCGGGCTGTAGA.........................................................................................................................................................................................................................................................................................2511.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TT-------GTTTTCC-ACTCT--ATCC-ACAGCTG...............................................2511.00100100000000000000
.............................................................................................................................AAGCAA-----------------ACTGA--------CT--------------GAT--ATCGGGCT..............................................................................................................................................................................................................................................................................................2411.00101000000000000000
.............................................................................AATC----CGACT----GGAAAG-----GGG-G..............................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATGGACTCCTGCCAGAATG2411.00101000000000000000
...................................................................................................................................................................................................................................AATTCGGAATTAGTGC--------------------------------------------------------------------TCTGACT..............................................................................................................................................................2311.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTTCCGTACTGCATGGACT............2311.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCTTCCGTACTGCATGGACTCC..........2611.00100000000001000000
..................................ATCTCAACTGGAAC---T------GGAGTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
............................................................................GAATC----CGACT----GGAAAG-----GGG-GT.............................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCGTACTGCATGGACT............1911.00101000000000000000
..........................................................................................................................................................................................................................TAAAGG-CCAATTCGGAATTAGT...........................................................................................................................................................................................................................................2211.00100000000001000000
...........................................................................................................................................................................................................................AAAGG-CCAATTCGGAATTAGTGC--------------------------------------------------------------------TC...................................................................................................................................................................2511.00100000000001000000
.................................................................................................................AA----G----CAAGCAA-----------------ACTGA--------CT--------------GAT--ATCGGGCC..............................................................................................................................................................................................................................................................................................2811.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCC-ACAGCTGCTGGCCGTGCGTGTG................................2511.00100000000001000000
.........................................................................................................................................................................................................................GTAAAGG-CCAATTCGGAATTA.............................................................................................................................................................................................................................................2111.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTGCATGGACTCCTGC.......2011.00100100000000000000
..................................................................................................................................................................T--------------GAT--ATCGGGCTGTAGACG------------------TC...................................................................................................................................................................................................................................................................2111.00100000000001000000
.................................................................................................................................AA-----------------ACTGA--------CT--------------GAT--ATCGGGCTG.............................................................................................................................................................................................................................................................................................2111.00100000000001000000
...............................................................................TC----CGACT----GGAAAG-----GG.................................................................................................................................................................................................................................................................................................................................................................................1511.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCATGGACTCCTGC.......1911.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATGGACTCCTGCCAGG...2111.00101000000000000000
............................................................................................................................CAAGCAA-----------------ACTGA--------CT--------------GAT--ATCGGGC...............................................................................................................................................................................................................................................................................................2411.00100100000000000000
................................TTATCTCAACTGGAAC---T------GGAGTTGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...............................................................................................................................................................................................................................G-CCAATTCGGAATTAGTGC--------------------------------------------------------------------TC...................................................................................................................................................................2111.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGGCCGTGCGTGTG................................1911.00100000000001000000
.....................................................................................................................................................................................................................................TTCGGAATTAGTGC--------------------------------------------------------------------TCTGACTAATAGT........................................................................................................................................................2711.00100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCCGTACTGCATGGACTCCTGC.......2511.00100010000000000000
..................................ATCTCAACTGGAAC---T------GGAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCCGTACTGCATGGACTCCTGCC......2711.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................TCTGACTAATAGTTTAATTCCCCGAA---C---------------A------------...........................................................................................................2811.00100000001000000000
droSec2
TA-------------ATATGTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACGAATC----CGACT----GGAAAG-----GGG-GTGAAA----G----CAAGCAA-----------------ACTGA--------CT--------------GAT--ATCGGGCTGTAGACG------------------TTGTAAAGG-CCAATTTGGAATTAGTGC--------------------------------------------------------------------TCTGACTAATAGTTTAATTCCCCGAA---C---------------A------------TATCTAATAGA------------CTT-------GTTTTCC-ACTCT--ATCC-ACAGCTGCTGGCCGTGCGTGTGTCTTCCGTACTGCATGGACTCCTGCCAGAATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................GAT--ATCGGGCTGTAGACG------------------TTG..................................................................................................................................................................................................................................................................2111.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCCGTGCGTGTGTCTTCCG.........................2211.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCATGGACTCCTGCC......2011.0011000
.................................................................................................................................................................CT--------------GAT--ATCGGGCTGTAGACG------------------TTGTAAA..............................................................................................................................................................................................................................................................2711.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATGGACTCCTGCCA.....1911.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCGTACTGCATGGACTCCTGC.......2411.0011000
......................................................................................GACT----GGAAAG-----GGG-GTGAAA----G----C...............................................................................................................................................................................................................................................................................................................................................................2111.0010100
......................................................................................................................................................................................ATCGGGCTGTAGACG------------------TTGTAAAG.............................................................................................................................................................................................................................................................2311.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCCGTGCGTGTGT...............................1911.0010100
....................................................................................................................................................ACTGA--------CT--------------GAT--ATCGGGCTGTA...........................................................................................................................................................................................................................................................................................2111.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGTCTTCCGTACTGCATGGA..............2411.0010010
............................................................................GAATC----CGACT----GGAAAG-----GGG-GTT............................................................................................................................................................................................................................................................................................................................................................................2211.0010100
dm3
TA-------------ATATGTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACGAATC----CGAGT----GGAAAG---ACGGG-GTGAAA----G----CAAGCAA-----------------ACTGA--------CT--------------GAT--TACGGCCTGTAGACG------------------TCGTAAAGG-CCAATTCGGAATTAGTGC--------------------------------------------------------------------TCTGACTAATAGTTTAATTCCCCGAA---C---------------T------------TATCTAATCGA------------TTC-------GTTTTCC-ACTCTATCCAC-ACAGCTGCTGGCCGTGCGTATGCCTACCTTACTGCATGGACTCCTGCCAGAATGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................GG-CCAATTCGGAATTAGTGC--------------------------------------------------------------------TCTGA................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTACCTTACTGCATGGACTCCTGC.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TTC-------GTTTTCC-ACTCTATCCAC-ACAG..................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TACGGCCTGTAGACG------------------TCGTAAAGG-...........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CATTGTTATCTCAACTGGAAC---T------..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCCGTGCGTATGC...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................GAGTTGAGTCAGATAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................ATCGA------------TTC-------GTTTTCC-ACTCTATCCAC-AC....................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATGGACTCCTGCCC.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATGGACTCCTGCCAGAA..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTTACTGCATGGACTCCTGCC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TCGGAATTAGTGC--------------------------------------------------------------------TCTGACTAATAGTTT......................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CG------------------TCGTAAAGG-CCAATTCGGA.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCCGTGCGTATGCCTAA...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TC----CGAGT----GGAAAG---ACGGG-...............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CGTAAAGG-CCAATTCGGAATTAGTG..........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................ATCTCAACTGGAAC---T------GGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATGGACTCCTGCCAGA...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................T------GGAGTTGAGTCAGATAACGAAT............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................................GG-CCAATTCGGAATTAGTGC--------------------------------------------------------------------TCT..................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCGTATGCCTACCTTACT.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TATCTCAACTGGAAC---T------GG................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CGGG-GTGAAA----G----CAAGCAA-----------------ACTGA--------...........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TAAAGG-CCAATTCGGAATTAGTGC--------------------------------------------------------------------.....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCGTGCGTATGCCTACC..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCCGTGCGTATGCCTAC...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CGAATC----CGAGT----GGAAAG---AC...................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................AATTCGGAATTAGTGC--------------------------------------------------------------------TCTGA................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCGTGCGTATGCCTACC..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATGGACTCCTGCCAGAA..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
T------------------GTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACGAACG----GGCTT----GGAAGT-----GTG-GTGAAA----G----CAAGCA------------------ACCGA--------CT--------------GAT--ATTGGCGTGTAGACG------------------TCGTAAAGG-CCAATTCGGAATTAGGGC--------------------------------------------------------------------TCTGACTAATAGCTTAATCGCCCGAG---C---------------ATACG------TGTATCTAATCGA------------TCT-----------TCC-ACTCT--ATCC-ACAGTTGCTGGCCGTGCGTGTGTCTTCCGTACTGCATGGACTCCTGCCAGAATGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTGTCTTCCGTACTGCATGGA..............2512.0021100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCATGGACTCCTGCC......2012.0021100000
.................................TATCTCAACTGGAAC---T------GGAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGTACTGCATGGACTCCTGCC......2411.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATGGACTCCTGCCAGAATG2411.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCCGTACTGCATGGACTCCTGC.......2611.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATGGACTCCTGCCAGAA..2211.0011000000
..........................................................................................................................................................................................................................................AATTAGGGC--------------------------------------------------------------------TCTGACTAAT...........................................................................................................................................................1911.0010000100
..................................ATCTCAACTGGAAC---T------GGAGTTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
.....................GAAAA-CATTGTTATCTCAACTGGAAC---.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGTGCGTGTGTCTTCCGT........................2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCGTACTGCATGGACTCCTGCCAGA...2811.0010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTTCCGTACTGCATGGACTC...........2411.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................AATCGA------------TCT-----------TCC-ACTCT--ATCC-ACAGT.................................................2611.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCGTGTGTCTTCCG.........................1911.0010000100
............................................................................GAACG----GGCTT----GGAAGT-----GT.................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................ATCC-ACAGTTGCTGGCCGTGCGT...................................2311.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCGTACTGCATGGACTCCTGC.......2411.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCCGTACTGCATGGACTCCT.........2411.0011000000
.......................................................................ATAACGAACG----GGCTT----GGAAGT-----GT.................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCGA------------TCT-----------TCC-ACTCT--...........................................................2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGTGCGTGTGTCTTCC..........................1911.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTTCCGTACTGCATG................1911.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCGTACTGCATGGACTCCTGCCA.....2611.0010100000
..................................................................................................................................................................................................................................................................................................................................GCTTAATCGCCCGAG---C---------------ATACG------TGT..........................................................................................................2411.0010000100
................................................................GAGTCAGATAACGAACG----GGCTT----..............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
droYak3
TG-------------ATACGTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACGAGTGGGGTGGCCT----GGAAAG-----GGG-GTGAAA----G----CAAGCAA-----------------ACTGA--------CT--------------GAT--ATC-------------------------------------AG-CCAATTCGGAATTAGAGT--------------------------------------------------------------------TCTGACTAATAGTTCAATTCCCCGAA---A---------------CTAAC--------CATCTAATCCA------------TCT-------CCTTTCC-ACTCC--ATCC-ACAGCTGCTGGCCCTGCGTGTGTCTGCCGTACTGCATGGACTCCTGCCAGAATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................TCT-------CCTTTCC-ACTCC--ATCC-ACAG..................................................2313.00303000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TCT-------CCTTTCC-ACTCC--ATCC-ACA...................................................2213.00303000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T-------CCTTTCC-ACTCC--ATCC-ACAGT.................................................2213.00303000000000
..............................................................................GTGGGGTGGCCT----GGAAAG-----GGG-G..............................................................................................................................................................................................................................................................................................................................................................................2212.00202000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCTGCGTGTGTCTGCC..........................1912.00211000000000
...............................................................................TGGGGTGGCCT----GGAAAG-----GGG-G..............................................................................................................................................................................................................................................................................................................................................................................2112.00202000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGTACTGCATGGACT............1912.00202000000000
.....................................................................................................................................................................................................................................TTCGGAATTAGAGT--------------------------------------------------------------------TCTGACT..............................................................................................................................................................2111.00110000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CT-------CCTTTCC-ACTCC--ATCC-ACAG..................................................2211.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTCC--ATCC-ACAGCTGCTGGCC.........................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGTACTGCATGGACTCCTGCC......2511.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATGGACTCCTGCCAG....1911.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGTACTGCATGGACT............2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T-------CCTTTCC-ACTCC--ATCC-ACAG..................................................2111.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGCGTGTGTCTGCCGTACTGC...................2511.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGCGTGTGTCTGCCGTACTGC...................2411.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGTACTGCATGGACTCCTGCCAGA...2811.00110000000000
.......................................................................................................................................................................................................................................................................................................................................................................................ATCCA------------TCT-------CCTTTCC-ACTCC--...........................................................2011.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTCC-ACTCC--ATCC-ACAGT.................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGTACTGCATGGACTCC..........2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGTACTGCATGGACTCCTGCCA.....2611.00101000000000
..................................ATCTCAACTGGAAC---T------GGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
...................................................................................................................................................................................................................................AATTCGGAATTAGAGT--------------------------------------------------------------------TCTGA................................................................................................................................................................2111.00101000000000
........................................................................TAACGAGTGGGGTGGCCT----GGA...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCATGGACTCCTGC.......1911.00101000000000
...................................................................................................................................................................................T--ATC-------------------------------------AG-CCAATTCGGAATTAG............................................................................................................................................................................................................................................2111.00100000010000
............................ATTGTTATCTCAACTGGAAC---T------GGAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTGCCGTACTGCATGGACTCCT.........2611.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTCTGCCGTACTGC...................1811.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCCGTACTGCATGGA..............1911.00101000000000
...........................................................................CGAGTGGGGTGGCCT----GGAAAG-----...................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCATGGACTCCTGCCA.....2011.00100010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGTACTGCATGGACTC...........2011.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CT-------CCTTTCC-ACTCC--ATCC-ACA...................................................2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCATGGACTCCTGCCAG....2211.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T-------CCTTTCC-ACTCC--ATCC-ACAGC.................................................2211.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGTACTGCATGGACTCCT.........2211.00110000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCCTGCGTGTGTCTGC...........................2211.00101000000000
........................AA-CATTGTTATCTCAACTGGAAC---T------GGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000001
droEug1
CC-------------ATACTTGAAAACCAATGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACAAAAG----TGCCT----GCAATG-----GGG-CCGAAG----A----CAAGCAA-----------------ACTGG--------CT--------------AAA--ATTGGCCCTAGGGCG------------------TTGTACAGG-CCAATA-GGAATTAGTGT--------------------------------------------------------------------TCGAACTAATGAATTAATTCCCCGCA---C---------------T------------TATCTAATCGA------------TCT-------TTTTTAA-TCTAAATATTC-ACAGCTGCTGGCCGTGCGTGTGCCTTCCTTATTGCATGGACTCCTGCCAGAATGSizeHit CountTotal NormTotal
No Reads
droBia1
GC-------------ATACTTGAAAA-CAATGTTATCTCAACTGGAAC---TGGAACTGGAGTTGAGTCAGATAACAAAGC----TGCCT----GCAATG-----GGG-CCAAAA----A----CAAGCCA-----------------ACCGA--------CT--------------GAA--ATTGGCCTGTTGAAG------------------TC------G-CCAAT--------AAATC--------------------------------------------------------------------TGTGACTAATGGATTAATTCCCCGAA---A---------------T------------TATCTAATTGA------------TCT-------TCTCTAA-TCTCC--ATCC-ACAGTTGCTGGCCTTGCGTCTGCCTTCCTTATTGCATGGATTCCTGCCAGAACGSizeHit CountTotal NormTotal
No Reads
droTak1
CC-------------ATACTTGAAAA-CAATGTTATCTCAACTGGGACGGCT------GGAGTTGAGTCAGATAACAAAGCTAGCTGCCT----GGAATG-----GGGGCTAAAA----A----CAAGCAA-----------------ACTGA--------AT--------------GAA--ATTGGGCTGTAGACGTCGGC---CTTAG-GGCGTTGTATAGG-CCAATA-GGAATTAGTGC--------------------------------------------------------------------TCTGACTAATCGATTTATTCC-CGAA---C---------------T------------TATCTAATCGA------------TCT-------CTTCTAA-TCTCC--ATCC-ACAGTTGCTGGCCTTGCGTTTGTCTTCCCTACTGCATGGATTCCTGCCAGAATGSizeHit CountTotal NormTotal
No Reads
droEle1
CC-------------ATACTTGAAAA-CAGTGTTATCTCAACTGGAAC---TGGAGTT-GAGTTGAGTGAGATAACAGAGC----TG----C-------------------GATA----GCAAACAAGTGA-----------------ACTGA--------CT--------------GAA--TTCGAGCTGCAAACGGCAGCCGTA--AG-AGCGT-TTATAGG-CCAATT-GGAATTAGCGC--------------------------------------------------------------------TCTGACTAATAAATTA-TCCCCGGAA---C---------------T------------TATCTAATCGA------------TTT-------TCACCAA-TCTTT--ATCC-ACAGCTGCTGGCCATGCGTCTGTCTTCCTTATTGCATGGACTCGTGCCAGAATGSizeHit CountTotal NormTotal
No Reads
droRho1
CC-------------ATACTTGAAAA-CAATGTTATCGCAACTGGAAC---T------GGAGTAGAGGCAGATAACAAAGC----TG----C-------------------GATA----ACAGACAAGTGA-----------------ACTGA--------CT--------------GGA--ATCGGCCCGTAGACTGCCGC---C-------C-GTGTATAGG-CCAATT-GGAATTAGCGC--------------------------------------------------------------------TCTGACTAATAAACCAATTCCCCGAA---C---------------C------------TATCTAATCGA------------TCC-------CCACCAA-TCTTT--ATCC-ACAGCTGCTGGCCTTGCGTATGTCTTCCGTATTGCATGGACTCCTGCCAGAATGSizeHit CountTotal NormTotal
No Reads
droFic1
---------------ATACATGAATA-CAATGTTATCTCAACTGGAAC---T------GAAGTTGAGTCAGATAACAAAGC----A-------------------------GAAA----T----CAAGCAA----A----CTGGATGAAATGACTGGGTGAATGAA---------------------ACTGAAGGCAACTGT---TATAG-GGC-GTGTATAGG-CCAATT-GGAATTAGCCT--------------------------------------------------------------------TTTGACTTACGAATTAATTCCCCGAT---C---------------T------------TATCTAATCGA------------TCT-------TTCTTAA-TCTGC--ATTT-ACAGCTGCTGGCCATGCGTATGTCTGCCTTACTGTATGGATTCCTGCCAAAATGSizeHit CountTotal NormTotal
No Reads
droKik1
---------------ATACTAGAAAA-CATTGTTATCGCAACTGGAAC---T------GGAGTTGAGTCAGATAGCGTTG------G-CACT----GATGGGGCCGGG-CTGAAA----A----CAAGCAA-----------------GCCGA----GCGACTGGA-ACGGGT---------------------------GCCCTC--GGGGGCCTTGTATTGTACCAATA-GGAATTAGTGCGGCAATTAGG--------------------------------A------------------GGAACC-TCTGACAAACTAGCTAATT----------------------------AAA--------TAAGTAATCAATATTTGTTTCCATCT-------C-------TCTAT--A-TT-TTAGCTGCTGGCCTTGCGTTTGCTTGCCGTACTGCATGGACTCCTGCCAGAATGSizeHit CountTotal NormTotal
No Reads
droAna3
GA-------------ATACTCGAAAT-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACAAACC----AG----T----GGTG-----GGA-CTGAAAAGTAGCCGAACAGAAA-----------------AGTGA----GAATTTCGAT-CTGGTAATAGAGGTAATAGGCTGT------------------------------GG-CCAATA-CAAATTAGTGCCGCAATTAGA--------------------------------A---------------------CCCTTTCAACTAATGAGTTAATTCCACAGAGGCC---------------A------------AATCTAATCAA------------TCTCCCCAATCTCTATATTTTCA--ATCC-ACAGTTGCTGGCCTTGCGTATGTCTGCCGTATTGTATGGATTCCTGCCAGAATGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTGCGTATGTCTGCCGT........................2012.002101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTGCCGTATTGTATGG...............2012.002010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTTGCGTATGTCTGCC..........................1911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATGTCTGCCGTATTGTATGG...............2311.001100000
............................................................................AAACC----AG----T----GGTG-----GGA-CTGAA..........................................................................................................................................................................................................................................................................................................................................................................2011.001000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATGTCTGCCGTATTGTATGGAT.............2511.001000010
.............................................................................................................................................................GAATTTCGAT-CTGGTAATAGAG........................................................................................................................................................................................................................................................................................................2211.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGCCGTATTGTATGGATTCCTGC.......2711.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTCTGCCGTATTGTATGGA..............2311.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGTATTGTATGGATTCCTGCCAGA...2711.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCCGTATTGTATGGA..............1911.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGTATGTCTGCCGTATTGTATG................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTCTGCCGTATTGTATGGAT.............2411.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATGGATTCCTGCCAGA...2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................AATCAA------------TCTCCCCAATCTCTATA...................................................................2311.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGATTCCTGCCAGAA..1911.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCCTTGCGTATGTCTGCC..........................2111.001100000
droBip1
TACATTATTGCCTGATTACTTGAAAA-CATTGTTATCTCAACTGGAAC---T------GGAGTTGAGTCAGATAACAAAAC----AC----C----GATG-----GGG-CTGAAAAGTAGCAAAAAAGTAA-----------------AGTGA----GAATGTCGAT-CTGGTAACAGAG--AGTGGGCTGT------------------------------GG-CCAATA-CGAATTAGTGCCGCAATTAGA--------------------------------A---------------------CCCTTTAGACTAATGAGTTAATTCCCCAAAACCC---------------A------------AATGTAATCAA------------TCTCCACAATCTCTATTTTTTCA--ACCC-ACAGTTGCTGGCCTTGTGTGTGTCTGCCGTATTGTATGGACTCCTGCCAGAATGSizeHit CountTotal NormTotal
No Reads
dp5
T-----------------------------TGTTATCGCCAGTGGAAA---T------GGAGTTGAGTCAGATAACAAATT----GA----CGAACA--------GCA-GTAGAA----A----TAGCCAGACACGTTTATTCCATCGATTGTCTGGACGACTGAA-CCGAAT--------------------------------T--AGGGGC------------------------------TCAAATACACCGACATATGTACTGCAATCACACTAATTGGGAGATATACCATTATTATGAAACACT------------------CTCCCCAAAACTCTACCCTTTCAGCTGTTTACTTTACTC-------ACTCTC------------CGT-------GTATCTC-TTTCT--ACCC-ATAGCTGCTGGCCCTGCGTGTGCCTGCCGTACTGCATGGATTCCTGTCAGAACGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCTGCGTGTGCCTGCCGTACTGC...................2617.0070700000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCATGGATTCCTGTCAGA...2313.0030300000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCATGGATTCCTGT.......1913.0030300000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCTGCGTGTGCCTGCCGTACT.....................2412.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCTGCCGTACTGCATGG...............2012.0020200000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGCGTGTGCCTGCC..........................1812.0020200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCATGGATTCCTGTC......2012.0020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCCCTGCGTGTGCCTGCC..........................2412.0020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCCTGCCGTACTGC...................1821.5030300000000
................................................................................................................................................ATCGATTGTCTGGACGACTGA.......................................................................................................................................................................................................................................................................................................................2111.0010000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................GT-------GTATCTC-TTTCT--ACCC-ATAG..................................................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGTACTGCATGGATTCCTGTC......2511.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGTGCCTGCCGTACTG....................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCTGCCGTACTGCATGGATTCCT.........2611.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCATGGATTCCTGTCA.....2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCCTGCCGTACTGC...................1911.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................TCTC------------CGT-------GTATCTC-TTTCT--ACCC-ATAG..................................................2711.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCCTGCCGTACTGCATGG...............2311.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCATGGATTCCTGTCAG....2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCCGTACTGCATGGATTCCTGTC......2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCCCTGCGTGTGC...............................1911.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................TC-------ACTCTC------------CGT-------GTATCTC-T.................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATGGATTCCTGTCAGAAC.2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCCGTACTGCATGGATTCCTGTCA.....2811.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTACTGCATGGATTCC..........1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATTCCTGTCAGAAC.1811.0011000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGCGTGTGCCTGCCGT........................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGTGCCTGCCGTACTGCATGG...............2611.0010000100000
........................................................................................................................................TTTATTCCATCGATTGTCTGGACGACT.........................................................................................................................................................................................................................................................................................................................2711.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCATGGATTCCTGT.......1811.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCCTGCCGTACTGCATGGATTC...........2711.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCTGCCGTACTGCATGGA..............2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATGGATTCCTGTCAGAA..2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGATTCCTGTCAGAAC.2011.0011000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCCTGCGTGTGCCTGCC..........................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCTGCGTGTGCCTGCC..........................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCCCTGCGTGTGCCTGCCGT........................2611.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCCTGCCGTACTGCATGGA..............2311.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGTACTGCATGGATTCCTGT.......2411.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCTGCGTGTGCCTGCCGTACTG....................2511.0010100000000
............................................................................................................................................................GACGACTGAA-CCGAAT--------------------------------T--AGGGGC------------------------------T.......................................................................................................................................................................................................................................2411.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCCCTGCGTGTGCC..............................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTGCATGGATTCCTGTCAGAAC.2611.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCATGGATTCCTGTCA.....2111.0010100000000
....................................CGCCAGTGGAAA---T------GGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCTGCCGTACTGCAT.................1920.5010100000000
droPer2
CA-------------ACACTCGAACG-GGTTGTTATCGCAAGTGGAAA---T------GGAGTTGAGTCAGATAACAAATT----GA----CGAACA--------GCA-GTAGAA----A----TAGCCAGACACATTTGTTCCACCGATTGTCTGGACGACTGAA-CCGAAT--------------------------------T--AGGGGC------------------------------TCAAATACACCGACATATGTACTGCAATCACACTAATTGGGAGATATACCATTATTATGAAAAACT------------------CTCCCCAAAACTCTACCCTTTCAGCTGTTTACTTTACTC-------ACTCTC------------CGT-------GTATCTC-TTTCT--ACCC-ATAGCTGCTGGCCCTGCGTGTGCCTGCCCTACTGCATGGATTCCTGTCAGAACGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCCCTGCGTGTGC...............................1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGCGTGTGCCTGCCC.........................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGTGCCTGCCCTAC......................1911.001010000
........................CG-GGTTGTTATCGCAAGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
........................................................................................................................................................................................................................................................ATACACCGACATATGTACTGC...............................................................................................................................................................................................................2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGCCTGCCCTACTGC...................2111.001010000
..............................................................................................................................................CCACCGATTGTCTGGACGACT.........................................................................................................................................................................................................................................................................................................................2111.001000001
droWil2
TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------TCT-------CTCTCTC-TCTTT--GCCCAACAGTTGCTGGCCGTGCGTTTGTTTGCCATATTGTATGGACTCGTGTCAGAATGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATGGACTCGTGTCAGA...2118.00800620
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTATGGACTCGTGTCA.....2116.00600330
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTATGGACTCGTGTC......2015.00500410
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTATGGACTCGTGTCAGA...2314.00400220
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATGGACTCGTGTCAGAAT.2313.00300120
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCCATATTGTATGGACTCGTGTCA.....2813.00303000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTATGGACTCGTGTCAGAATG2613.00302100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATGGACTCGTGTC......1813.00300030
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTATGGACTCGTGT.......1912.00200020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATGGACTCGTGTCAGAA..2212.00200200
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTATGGACTCGTGTCAGAAT.2512.00200110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTGTATGGACTCGTGTCAGA...2412.00200200
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATGGACTCGTGTCAGA...2011.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTTTGCCATATTGTATGGACT............2511.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGGACTCGTGTCAGAAT.2111.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTATGGACTCGTGTCA.....2011.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCGTGCGTTTGTTTGCC..........................2011.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCGTGCGTTTGTTTGCC..........................2211.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCGTGCGTTTGTTTGCCATA.......................2611.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTGCCATATTGTATGGACTCGTGTC......2911.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTATGGACTCGTGTCAGAA..2411.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCATATTGTATGGACTCGTGT.......2311.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTTTGCCATATTGTATGG...............2211.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATATTGTATGGACTCGTGT.......2211.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGGACTCGTGTCAGA...1911.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATATTGTATGGACTCGTGTCAGAA..2611.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCGTGCGTTTGTT..............................1811.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTGTATGGACTCGTGTCA.....2211.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGTGCGTTTGTTTGCCATATT.....................2411.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCGTGCGTTTGTTTGC...........................2211.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCGTGCGTTTGT...............................1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCATATTGTATGGACTCGTGTCA.....2611.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTATGGACTCGTGTCAGA...2211.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTATGGACTCGTGTCAGAAT.2411.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATGGACTCGTGTCAG....2011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGACTCGTGTCAGAAT.2011.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCCATATTGTATGGACTCGTGT.......2611.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATGGACTCGTGTCA.....1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTGTATGGACTCGTGT.......2011.00100100
droVir3
AC-------------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGAAATGA---TT-------TTT-------TTCTTTT-ATTCC--CCTT-GCAGCTGTTGGCCTTGTGTTTGTGTGCCCTATTGCATGGACTCCTGCCAGAACGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCTATTGCATGGACTCCTGCCA.....2613.003002000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCTATTGCATGGACT............1912.002001100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGTGTGCCCTATTGCATGGACTC...........2811.001000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGGCCTTGTGTTTGTGTGC...........................2311.001000000010000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTATTGCATGGACTCCTGC.......2211.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................T-GCAGCTGTTGGCCTTGT.....................................1811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTATTGCATGGACTCCTGCC......2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTATTGCATGGACTCCTGCCA.....2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCTTGTGTTTGTGTGC...........................2011.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................T-GCAGCTGTTGGCCTTGTGTTTGTG..............................2511.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCCTTGTGTTTGTGTGC...........................2111.001000000010000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGTTTGTGTGCCCTATTGCATG................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCCTTGTGTTTGTGTGCC..........................2211.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTGCCCTATTGCATGGA..............2111.001000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGGCCTTGTGTTTGTGTGCC..........................2411.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCTATTGCATGGACTCC..........2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATTGCATGGACTCCTGCCAGAACG2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTGCATGGACTCCTGCCAGA...2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATGGACTCCTGCCAG....1820.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGCTCTGCC--CTTC-GCAGCTGCTGGCCCTGCGTTTGTGTGCCCTACTGCATGGACTCCTGCCAGAACGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTTTGTGTGCCCTACTGCATGGA..............2711.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCATGGACTCCTGCCAGAAC.2511.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTTTGTGTGCCCTACTGCATGGAC.............2811.001100000
.C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGCTCTGCC--CTTC-GC....................................................1911.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGTGCCCTACTGCATGGACT............2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTACTGCATGGACTC...........1820.501100000
droGri2
TT-------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--CTCTC--TTCT-ACAGCTGTTGGCCGTGTGTTTGCCTGCCCTACTGCATGGATTCCTGCCAGAATGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCCCTACTGCATGGATTCCTGCCA.....2811.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCTGCCCTACTGCAT.................1811.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCTACTGCATGGATTCCTGCCAG....2611.00110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCGTGTGTTTGCCTGCCCTAC......................2511.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGTTTGCCTGCCCTACTGC...................2311.00110

Generated: 05/19/2015 at 05:40 AM