ID:

dsi_1558

 Coordinate:

2l:792960-793131 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-42.7 -42.7 -42.6

Flybase annnotation

exon [2l_793132_793336_+]; CDS [2l_793132_793336_+]; CDS [2l_792524_792959_+]; exon [2l_792410_792959_+]; intron [2l_792960_793131_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGCCGCCGGCAACGCTGGAACCCAATCAATGGCGGGCAACATGAAGCACGGTGAGCAACTGCAACACAATAACCTCACAGCGAGAAAAGCATTGGGTGTAGTAAAACAATCTAGGATTTTTATGCTAACGAAATTGAGGTTCTGTCATACTGGCCCATTTTGCTTTTCTAACTGTGTGTGCACTTGGTGCTCTTCTAACCCTTCCTGTTACTCAATCCGCAGGCAAATCTCAGGACGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCG
**************************************************..(((((.......((((.......(((((..(((((((((.(((((.(((((..(((((((..((((((.........)))))).))))..)))..))))))))))...)))))))))..))))))))).......)))))............((((..........))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 GSM343915
embryo
 M024
male body		 O002
Head
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
..................................................................................................................................................................................................................................ATCTCAGGACGACGTCTGCT.......................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................................ATCTAGGATTTCTATGCT.................................................................................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................AATCTCAGGACGACGTCT............................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................ATTGGGTGTAGTAAAACA.................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
..............CTGGAACCCAATCAATGGC............................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................................................................TGACAGCGACATAAGCATTGG................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 1 0 0
.......................................................................................AGCATTGGGTGTAGCTAC....................................................................................................................................................................... 18 3 20 0.35 7 0 0 0 0 7 0 0 0
...........ACGCTGGCACCCAAT...................................................................................................................................................................................................................................................... 15 1 4 0.25 1 0 0 0 0 1 0 0 0
........................................................................................CAATTGGGTGTAGTAAAA...................................................................................................................................................................... 18 2 13 0.08 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................TGCTGCTCTTACCCTTCCTG................................................................. 20 3 15 0.07 1 0 0 0 0 0 0 1 0
..........................................GAAGCATGGTGATCAACTC................................................................................................................................................................................................................... 19 3 17 0.06 1 0 1 0 0 0 0 0 0
..........................................................................................................................TGCTCACGAAATTGAGCCT................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 1 0 0 0
............................................................................................................................................................................TGTCCGGGCACTTGGTGCT................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 1
.......................................................................................AGCATTGGGTGTAGCT......................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0
........................................................................................GCATTGGGTGTAGCTA........................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 1 0 0 0
........................................ATGAAAGACGGTGAGC........................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

ACGGCGGCCGTTGCGACCTTGGGTTAGTTACCGCCCGTTGTACTTCGTGCCACTCGTTGACGTTGTGTTATTGGAGTGTCGCTCTTTTCGTAACCCACATCATTTTGTTAGATCCTAAAAATACGATTGCTTTAACTCCAAGACAGTATGACCGGGTAAAACGAAAAGATTGACACACACGTGAACCACGAGAAGATTGGGAAGGACAATGAGTTAGGCGTCCGTTTAGAGTCCTGCTGCAGACGATGCACCATCGGTTCATGCTGATACGC
**************************************************..(((((.......((((.......(((((..(((((((((.(((((.(((((..(((((((..((((((.........)))))).))))..)))..))))))))))...)))))))))..))))))))).......)))))............((((..........))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
......................................................CGTAGACGTTGTGTTGTTAGAGT................................................................................................................................................................................................... 23 3 1 2.00 2 1 1 0 0 0 0 0
..........................................................................................................................................................................................CACGAGAAGATCGGG....................................................................... 15 1 11 1.00 11 11 0 0 0 0 0 0
..GGGGGCCGGTGCGACCGTGGGT........................................................................................................................................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................ATGATTGCCTTAGCTCCAAGA................................................................................................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................CCACGAGAAGATCGGGTAG.................................................................... 19 2 5 0.40 2 0 0 0 2 0 0 0
...........................................................................................................................................................................................ACGAGAAGATTGGGTAG.................................................................... 17 1 15 0.33 5 5 0 0 0 0 0 0
........................................................................................................................................................................................ACCACGAGAAGATCGGGTAG.................................................................... 20 2 3 0.33 1 0 0 0 0 1 0 0
.....................................................................................................................AAAATACGACTGCTATAAC........................................................................................................................................ 19 2 4 0.25 1 0 0 0 0 0 1 0
......................................................................................................................................................................................GTACCACGAGAAGATCGG........................................................................ 18 2 4 0.25 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................CACGAGAAGATCGGGACG.................................................................... 18 2 6 0.17 1 1 0 0 0 0 0 0
...............................................................................................................................................................AACGAAAAGATTGGC.................................................................................................. 15 1 15 0.13 2 0 1 0 0 0 0 1
.......CCGTTGCGACCTAGGAT........................................................................................................................................................................................................................................................ 17 2 9 0.11 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................ACGAGAAGATTGGGT...................................................................... 15 1 20 0.10 2 2 0 0 0 0 0 0
........................................................................................................................................................................................ATCACGAGAAGATCGGG....................................................................... 17 2 10 0.10 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................ACGAGAAGATCGGGAA..................................................................... 16 1 20 0.10 2 1 1 0 0 0 0 0
.........................................................................................................................................................................................CTACGAGAAGATCGGGA...................................................................... 17 2 18 0.06 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:792910-793181 + dsi_1558 TGCCGCCG--------GCAACGCTGG-------------AACCCAATCAATGGCGGGCAACATGAAGCACGGTGAGCAACTG----C---------------AA---CACA--------------------------ATAACCTCACAGCGAGAAAAGCATTGGGTGTAGTAAAACAATCTAGGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGCTAACGAAATTG----------------AGGTTCT--------------------------------------------------------GTCATACTGGCCCA--------------------TTTTGCTTTTCTAACTGTGTGTGCACTTGGTGCTCT----------------------------TC-------------TAACCC-TTCCTGTT--ACTCAATCCGCAGGCAAATCTCAG------GACGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCG
droSec2 scaffold_14:800329-800600 + dse_847 TGCCGCCG--------GCAACGCTGG-------------AACCCAATCAATGGCGGGCAACATGAAGCACGGTGAGCAACTG----C---------------AA---CACA--------------------------ATAACCTCACAGCGAGAAAAGCATTGGGTGTAGTAAAACAATCTAGGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGCTAACGAAATTG----------------AGGTTCT--------------------------------------------------------GTCATACTGGCCCA--------------------TTTTGCTTTTCTAACTGTGTGTGCACTTGGTGCTTT----------------------------TC-------------TAACCC-TTCCTGTT--ACTCAATCCGCAGGCAAATCTCAG------GACGACGTCTGCTACGTGGTAGCCAAGTATGACTATGCG
dm3 chr2L:829922-830194 + TGCCGCCG--------GCAACGCTGG-------------AACCCAATCAATGGCGGGCAACATGAAGCACGGTGAGCAACTG----C---------------AA---CACA--------------------------ATAACCTCACAGCGAGAAGAGCATTGGGTGTAGTAAAAGGATCTAGGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATGCTAATGAATTTG----------------TGGTTCT--------------------------------------------------------ATCATACTGGCCCA--------------------TTTTGCTTTTCTAACTGTGTGTGCACTTGGTACTCT----------------------------TC-------------TAACCTGTTCCTGTT--AATCACTCCGCAGGCAAATCTCAG------GACGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCG
droEre2 scaffold_4929:886593-886941 + TGCCGCCG--------GCAACGCTGG-------------AACCCAATCAATGGCGGGCAACATGAAGCACGGTGAGCAACTG----C---------------AG---CACA--------------------------GTAGCCTCACAGCGAGAAGAGCATTGGGCTTAGTATAAAGATCTGGGATTCGTAGAGCTGTTTGTAAACGGTGCAGCGGTCGACAGATACGAATGCTGCACCGTTAA----------------------------------------------------------------------CAA-------------------------------------------------------------------TCACTTTATGCTACGGAACTTG----------------AGGTT------------------------------------------------------------CATTCTGGTCCA--------------------ATTTGCTTTTCTTACTGTGTGTGCACTTGGTACTTTTCTAAGAGCCGAACCAAACTAA------------------------TTT-CTTCCGTT--ATCCAACCCGCAGGCAAATCTCAG------GACGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCG
droYak3 3R:20850889-20850949 - GGCCGCCG--------TCAGCTCC-------ACTCGTGGAGCCGCGTCGGTGGGCAGCAG--------------------------C---------------AA---CGCG--------------------------AATACCTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409554:1555767-1556038 + TGCCGCCG--------GCAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTGAGCAATTG----C---------------AA---CATA--------------------------ATATTTATACAGAGA-TGCAGCAATAGTCGT-------------------------GCAGAATGTAAAG------------GACAGGCATGATCGCTGCACCGTTAGGGACAGTTT------GATCAATA-----------------------------------------------CGATTCTAATA-------------------------------------AG--------------------TTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTCTGAGAATTAAACCAAACTAA------------------------TAT-TTTCCATC--TTCCTGTCGTCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCG
droBia1 scf7180000302261:2987258-2987355 - TGCCGCCG--------GCAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTGAGCAACTT----C---------------AC---CAAG--------------------------ATGGCTCGGCAGCG-GAAGAGCATTAAGGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415856:482488-482549 + CTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCG
droEle1 scf7180000490458:471653-472026 - TGCCGCCG--------GCAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTGAGCTGCTA----G---------------TA---CACA-CTC-----TAT---------ACA----ATATTAACA----GAGGAGCAAAA-------------------------------------------------------------------------------TGGG---------------------------------GTAAA------------A------------------------------------------CCAGGA----------------------TTTAGGGA--------T----TCTA-------AAACTTCATGACACAAGTCAATTAAATTCTTAGGAAGTAACAATTAAGTATAATCTTGGTTTTGAGTCTATACATACATACATTTTTTTGTACTAGGTCATGAAGTTATAATCCCTATTGTCTTGGTTTTCTCACTCA--ATACACTCTATACTTT----------------------------TTTTTAGAATGAAAATAACAA-TTCGTATTGTATCCAATCCGCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGATTATGCA
droRho1 scf7180000767553:15103-15294 - TGCCGCCG--------GCAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTGAGCTCCTC----T---------------AA----------------------------TCATGACATATTCACA----GAAGAGCATTAGGAGTAATGACAGGATCTAGGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCA-------GAAATTA----------------AAATTCT--------------------------------------------------------CATAAATTGGCTG-----------------------TAAATTCTTGCACCATGTGTACA---GGAACTCA----------------------------TG-------------CAATTC-ATTCTAT------------------------------------------------------------------------
droFic1 scf7180000453904:1101282-1101592 + TGCCGCCG--------GCAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTAAGCAAGGGGCTAA---------------------------------------------------------------------------T-------------------------------------------------------------------------------CGGG---------------------------------CTTACCATCTTTGCATAACTTGTACGAAGACTATT-------AATAAAGGGCATTATTTCCCAAGATGTTTGTGAGCGATTGCAGTCATCTTGGGAGTAAGAGC-----AC--CACTAACAAAATAC----------------AAGTTTA--------------------------------------------------------AAGATCTT------------------------------CCTC-----------------TTTTGTACTTCTCTCAGAATTGAACCCGACTAATGCTCA------------------CCC-C-----AC--CTCCAATTCCCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCG
droKik1 scf7180000301725:183584-183753 - TGCCGCAG--------GAAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTGAGTTATTGGATTA---------------GATTCC---ATCTAACTTCGGACTCCAACTTTACT---------------------------------------------------------------------------------------------------------------------------------------AATAATC------------------------------------GTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTCCCAGGCAAATCTCAG------GAAGACGTGTGCTATGTGGTAGCCAAGTACGACTATGCG
droAna3 scaffold_12916:2720541-2720706 + GGAAGCGGGTGCTACAGCAACACTGG-------------AACCCAACCAATGGCGGGAAACATGAAGCACGGTGAGTCC--------------------------------ATCTAT---------------CCACT---------------------------------------------------------------------------------------------------------CGTA---------------------ATCGGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTCTAA------------------TCC-TTC-------TCTCCGTTCGCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTATGACTATGCG
droBip1 scf7180000396737:2043794-2043964 - GGAAGCGGGTGCTACAGCAACACTGG-------------AACCCAACCAATGGCGGGAAACATGAAGCACGGTGAGTCG------------------------------------AT-----------------------------------------------------------------------------------------------------------------------------CCGGTCA-------------------------TAACT------------------------------------GATTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------CTAAGGCTAA------------------TCC-TCTCTGTG--TCCACCATCTCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCG
dp5 4_group3:5622600-5622766 + CGCCGCTG--------GCAACGCTGG-------------ACCCCAATCAATGGCGGGCAACATGAAGCACGGTAAGCTTGAGGCTGA---------------TA---C---ATCCAT-----------------------------------------------------------------------------------------------------------------------------CGGGACACTCT-------------------ATAAACT------------------------------------GTTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------TC------------------------------------TT--CGCTGATTCACAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGATTATGCG
droPer2 scaffold_1:7113995-7114161 + CGCCGCTG--------GCAACGCTGG-------------ACCCCAATCAATGGCGGGCAACATGAAGCACGGTAAGCTTGTGGCTGA---------------CA---C---ATCCAT-----------------------------------------------------------------------------------------------------------------------------CGGGACACTCT-------------------ATAAACT------------------------------------GTTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------TC------------------------------------TT--CGCTGATTCACAGGCA-ATCTCAGT-----GAAGACGTCTGCTACGTGGTAGCCAAGTACGATTATGCG
droWil2 scf2_1100000004585:2701770-2701958 + ------------------AACGCTGGACCA-AC------ACAACAATCAATGGCGGGCAACATGAAGCACGGTAAGGGTTAAATCGACCCTCCCTCCCTTCCTT---C---CTCCCT-----------------------------------------------------------------------------------------------------------------------------CGAAACATTGTGAACAT--------ATCGAATTAATT------------------------------------GATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCATT--CTTCATTTGCTAGGCAAATCCCAG------GAAGATGTCTGCTACGTTGTAGCCAAATATGATTATGCC
droVir3 scaffold_12963:19364326-19364404 + CGCCGGAACT-----GGCAACGCTGG-------------ACAGCAATCAATGGCGGGCAACATGAAGCACGGTGAGTTCTGC----C---------------CA---CAAT--------------------------ATACCCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:23846578-23846694 - ----------------GCAACGCTGG-------------ACCACAATCAATGGCGGGCAACATGAAGCACGGTAAGCAAACG----A---------------TT---TATC-ATT-----A-----------TC---ATAATATACCATAGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAACAT-AGAGCAAAGAAGA--------------------AGATTGATTTTAAT
droGri2 scaffold_271:1694-1798 - CAGCAGCA--------GCGTCAACAT----CATCA-----GCAGCAGCAGCAGCAGT-----TAAAACAGCAGCAACATCAG----C---------------AG---CAGA--------------------------AAAAAC----AGCAGCAGCAACAGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCTAAA-ACA-------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGCCGCCG--------GCAACGCTGG-------------AACCCAATCAATGGCGGGCAACATGAAGCACGGTGAGCAACTG----C---------------AA---CACA--------------------------ATAACCTCACAGCGAGAAAAGCATTGGGTGTAGTAAAACAATCTAGGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGCTAACGAAATTG----------------AGGTTCT--------------------------------------------------------GTCATACTGGCCCA--------------------TTTTGCTTTTCTAACTGTGTGTGCACTTGGTGCTCT----------------------------TC-------------TAACCC-TTCCTGTT--ACTCAATCCGCAGGCAAATCTCAG------GACGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCAG------GACGACGTCTGCT..........................2011.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCAG------GACGACGTCT.............................1811.00100100000000000000
...............................................................................................................................................................ATTGGGTGTAGTAAAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
......................CTGG-------------AACCCAATCAATGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
............................................................................................................................................................AGCATTGGGTGTAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
droSec2
TGCCGCCG--------GCAACGCTGG-------------AACCCAATCAATGGCGGGCAACATGAAGCACGGTGAGCAACTG----C---------------AA---CACA--------------------------ATAACCTCACAGCGAGAAAAGCATTGGGTGTAGTAAAACAATCTAGGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGCTAACGAAATTG----------------AGGTTCT--------------------------------------------------------GTCATACTGGCCCA--------------------TTTTGCTTTTCTAACTGTGTGTGCACTTGGTGCTTT----------------------------TC-------------TAACCC-TTCCTGTT--ACTCAATCCGCAGGCAAATCTCAG------GACGACGTCTGCTACGTGGTAGCCAAGTATGACTATGCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................ACGCTGG-------------AACCCAATCAATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGTT--ACTCAATCCGCAG........................................................2111.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGTT--ACTCAATCCGCAA........................................................2111.0010010
.............................................ATCAATGGCGGGCAACATGAAGCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
dm3
TGCCGCCG--------GCAACGCTGG-------------AACCCAATCAATGGCGGGCAACATGAAGCACGGTGAGCAACTG----C---------------AA---CACA--------------------------ATAACCTCACAGCGAGAAGAGCATTGGGTGTAGTAAAAGGATCTAGGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATGCTAATGAATTTG----------------TGGTTCT--------------------------------------------------------ATCATACTGGCCCA--------------------TTTTGCTTTTCTAACTGTGTGTGCACTTGGTACTCT----------------------------TC-------------TAACCTGTTCCTGTT--AATCACTCCGCAGGCAAATCTCAG------GACGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------GACGACGTCTGCTACGTGGTAGCC...............2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAG------GACGACGTCTGCTACGT......................2113.0030000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................CTGG-------------AACCCAATCAATGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAGCCAAGTACGACTAT...1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...........................................CAATCAATGGCGGGCAACATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................CGGGCAACATGAAGCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCAG------GACGACGTCTGCTACGTG.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................AATGGCGGGCAACATGAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GCGGGCAACATGAAGCACGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAATCTCAG------GACGACG................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTCAG------GACGACGTC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................GGGCAACATGAAGCACGGTGAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------GACGACGTCTGCTACGTGGT...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...........................................CAATCAATGGCGGGCAACATGAAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCAG------GACGACGTCTGCTACGTG.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACGCTGG-------------AACCCAATCAATGGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCTACGTGGTAGCCAAGTA..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GCGGGCAACATGAAGCACGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCAG------GACGACGTCTGCTACGT......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................AATGGCGGGCAACATGAAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCAG------GACGACGTCTGCTACGT......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTTCCTGTT--AATCACTC.............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAG------GACGACGTCTGCTACGTGG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACGTCTGCTACGTGGTAGCCA..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCCGCAGGCAAATCTCAG------.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAATCTCAG------GACGACGTC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................................................................AA---CACA--------------------------ATAACCTCACAGCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATTTG----------------TGGTTCT--------------------------------------------------------ATCATACTG..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CAGCGAGAAGAGCATTGGGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTCAG------GACGACGTCTGCTACGT......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATCTCAG------GACGACGTCTGCTACG.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG------GACGACGTCTGCTACGTGGT...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCAG------GACGACGTCTGCT..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGTCTGCTACGTGGTAGCC...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TCAATGGCGGGCAACATGAAGCACGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAG------GACGACGTCTGCTACGTGGTA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................GGGTGTAGTAAAAGGATCTAGGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG......................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTCAG------GACGACGTCTGCT..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
TGCCGCCG--------GCAACGCTGG-------------AACCCAATCAATGGCGGGCAACATGAAGCACGGTGAGCAACTG----C---------------AG---CACA--------------------------GTAGCCTCACAGCGAGAAGAGCATTGGGCTTAGTATAAAGATCTGGGATTCGTAGAGCTGTTTGTAAACGGTGCAGCGGTCGACAGATACGAATGCTGCACCGTTAA----------------------------------------------------------------------CAA-------------------------------------------------------------------TCACTTTATGCTACGGAACTTG----------------AGGTT------------------------------------------------------------CATTCTGGTCCA--------------------ATTTGCTTTTCTTACTGTGTGTGCACTTGGTACTTTTCTAAGAGCCGAACCAAACTAA------------------------TTT-CTTCCGTT--ATCCAACCCGCAGGCAAATCTCAG------GACGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................AACCCAATCAATGGCGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGTCTGCTACGTGGTAGCC...............2211.0010001000
........................................ACCCAATCAATGGCGGGCAACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
......................................................................................................................................................................................................................................TGCTGCACCGTTAA----------------------------------------------------------------------CAA-------------------------------------------------------------------TCACT.......................................................................................................................................................................................................................................................................................................2211.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAG------GACGACGTCTGCTACGTGGTA..................2611.0010000100
droYak3
GGCCGCCG--------TCAGCTCC-------ACTCGTGGAGCCGCGTCGGTGGGCAGCAG--------------------------C---------------AA---CGCG--------------------------AATACCTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................GCGTCGGTGGGCAGCAG--------------------------C---------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000
......................CC-------ACTCGTGGAGCCGCGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000
......................CC-------ACTCGTGGAGCCGCGTCGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001000000
....GCCG--------TCAGCTCC-------ACTCGTGGAGCCGCGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.00100000000001
.......................C-------ACTCGTGGAGCCGCGTCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
.......................C-------ACTCGTGGAGCCGCGTCGGTGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......G--------TCAGCTCC-------ACTCGTGGAGCCGCGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................................GCCGCGTCGGTGGGCAGCAG--------------------------C---------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.................................................GTGGGCAGCAG--------------------------C---------------AA---CGCG--------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
........................................GCCGCGTCGGTGGGCAGCAG--------------------------C---------------AA---CGCG--------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.......................................AGCCGCGTCGGTGGGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.......................C-------ACTCGTGGAGCCGCGTCGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
......................CC-------ACTCGTGGAGCCGCGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
........................................GCCGCGTCGGTGGGCAGCAG--------------------------C---------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
....................CTCC-------ACTCGTGGAGCCGCGTCGGTGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.......................................AGCCGCGTCGGTGGGCAGCAG--------------------------C---------------AA---C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
......................................GAGCCGCGTCGGTGGGCAGCAG--------------------------C---------------AA---CGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...................................GTGGAGCCGCGTCGGTGGGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000
droEug1
TGCCGCCG--------GCAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTGAGCAATTG----C---------------AA---CATA--------------------------ATATTTATACAGAGA-TGCAGCAATAGTCGT-------------------------GCAGAATGTAAAG------------GACAGGCATGATCGCTGCACCGTTAGGGACAGTTT------GATCAATA-----------------------------------------------CGATTCTAATA-------------------------------------AG--------------------TTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTCTGAGAATTAAACCAAACTAA------------------------TAT-TTTCCATC--TTCCTGTCGTCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCGSizeHit CountTotal NormTotal
No Reads
droBia1
TGCCGCCG--------GCAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTGAGCAACTT----C---------------AC---CAAG--------------------------ATGGCTCGGCAGCG-GAAGAGCATTAAGGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCGSizeHit CountTotal NormTotal
No Reads
droEle1
TGCCGCCG--------GCAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTGAGCTGCTA----G---------------TA---CACA-CTC-----TAT---------ACA----ATATTAACA----GAGGAGCAAAA-------------------------------------------------------------------------------TGGG---------------------------------GTAAA------------A------------------------------------------CCAGGA----------------------TTTAGGGA--------T----TCTA-------AAACTTCATGACACAAGTCAATTAAATTCTTAGGAAGTAACAATTAAGTATAATCTTGGTTTTGAGTCTATACATACATACATTTTTTTGTACTAGGTCATGAAGTTATAATCCCTATTGTCTTGGTTTTCTCACTCA--ATACACTCTATACTTT----------------------------TTTTTAGAATGAAAATAACAA-TTCGTATTGTATCCAATCCGCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGATTATGCASizeHit CountTotal NormTotal
No Reads
droRho1
TGCCGCCG--------GCAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTGAGCTCCTC----T---------------AA----------------------------TCATGACATATTCACA----GAAGAGCATTAGGAGTAATGACAGGATCTAGGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCA-------GAAATTA----------------AAATTCT--------------------------------------------------------CATAAATTGGCTG-----------------------TAAATTCTTGCACCATGTGTACA---GGAACTCA----------------------------TG-------------CAATTC-ATTCTAT------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGCCGCCG--------GCAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTAAGCAAGGGGCTAA---------------------------------------------------------------------------T-------------------------------------------------------------------------------CGGG---------------------------------CTTACCATCTTTGCATAACTTGTACGAAGACTATT-------AATAAAGGGCATTATTTCCCAAGATGTTTGTGAGCGATTGCAGTCATCTTGGGAGTAAGAGC-----AC--CACTAACAAAATAC----------------AAGTTTA--------------------------------------------------------AAGATCTT------------------------------CCTC-----------------TTTTGTACTTCTCTCAGAATTGAACCCGACTAATGCTCA------------------CCC-C-----AC--CTCCAATTCCCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCGSizeHit CountTotal NormTotal
No Reads
droKik1
TGCCGCAG--------GAAACGCTGG-------------AACCCAACCAATGGCGGGCAACATGAAGCACGGTGAGTTATTGGATTA---------------GATTCC---ATCTAACTTCGGACTCCAACTTTACT---------------------------------------------------------------------------------------------------------------------------------------AATAATC------------------------------------GTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTCCCAGGCAAATCTCAG------GAAGACGTGTGCTATGTGGTAGCCAAGTACGACTATGCGSizeHit CountTotal NormTotal
No Reads
droAna3
GGAAGCGGGTGCTACAGCAACACTGG-------------AACCCAACCAATGGCGGGAAACATGAAGCACGGTGAGTCC--------------------------------ATCTAT---------------CCACT---------------------------------------------------------------------------------------------------------CGTA---------------------ATCGGATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTCTAA------------------TCC-TTC-------TCTCCGTTCGCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTATGACTATGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAG------GAAGACGTCTGCTACGT......................2111.001000001
.................................................................................................................................................................................................................................................................................TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTCTAA------------------TCC-TTC-------TCTCCGTTCGCAG........................................................2911.001100000
droBip1
GGAAGCGGGTGCTACAGCAACACTGG-------------AACCCAACCAATGGCGGGAAACATGAAGCACGGTGAGTCG------------------------------------AT-----------------------------------------------------------------------------------------------------------------------------CCGGTCA-------------------------TAACT------------------------------------GATTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------CTAAGGCTAA------------------TCC-TCTCTGTG--TCCACCATCTCAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGACTATGCGSizeHit CountTotal NormTotal
No Reads
dp5
CGCCGCTG--------GCAACGCTGG-------------ACCCCAATCAATGGCGGGCAACATGAAGCACGGTAAGCTTGAGGCTGA---------------TA---C---ATCCAT-----------------------------------------------------------------------------------------------------------------------------CGGGACACTCT-------------------ATAAACT------------------------------------GTTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------TC------------------------------------TT--CGCTGATTCACAGGCAAATCTCAG------GAAGACGTCTGCTACGTGGTAGCCAAGTACGATTATGCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................AATCAATGGCGGGCAACATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................TGGCGGGCAACATGAAGCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......G--------GCAACGCTGG-------------ACCCCAATCAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................AACGCTGG-------------ACCCCAATCAATGGCGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
........................GG-------------ACCCCAATCAATGGCGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................CAACGCTGG-------------ACCCCAATCAATGGCGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.......................TGG-------------ACCCCAATCAATGGCGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTCAG------GAAGACGTCTGCT..........................2211.0010100000000
droPer2
CGCCGCTG--------GCAACGCTGG-------------ACCCCAATCAATGGCGGGCAACATGAAGCACGGTAAGCTTGTGGCTGA---------------CA---C---ATCCAT-----------------------------------------------------------------------------------------------------------------------------CGGGACACTCT-------------------ATAAACT------------------------------------GTTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------TC------------------------------------TT--CGCTGATTCACAGGCA-ATCTCAGT-----GAAGACGTCTGCTACGTGGTAGCCAAGTACGATTATGCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
------------------AACGCTGGACCA-AC------ACAACAATCAATGGCGGGCAACATGAAGCACGGTAAGGGTTAAATCGACCCTCCCTCCCTTCCTT---C---CTCCCT-----------------------------------------------------------------------------------------------------------------------------CGAAACATTGTGAACAT--------ATCGAATTAATT------------------------------------GATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCATT--CTTCATTTGCTAGGCAAATCCCAG------GAAGATGTCTGCTACGTTGTAGCCAAATATGATTATGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCAG------GAAGATGTCTGCT..........................2112.00220000
............................................AATCAATGGCGGGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
.....................................................CGGGCAACATGAAGCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.............................................ATCAATGGCGGGCAACATGAAGCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100001
droVir3
CGCCGGAACT-----GGCAACGCTGG-------------ACAGCAATCAATGGCGGGCAACATGAAGCACGGTGAGTTCTGC----C---------------CA---CAAT--------------------------ATACCCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................ATCAATGGCGGGCAACATGAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................GCAACGCTGG-------------ACAGCAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
----------------GCAACGCTGG-------------ACCACAATCAATGGCGGGCAACATGAAGCACGGTAAGCAAACG----A---------------TT---TATC-ATT-----A-----------TC---ATAATATACCATAGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAACAT-AGAGCAAAGAAGA--------------------AGATTGATTTTAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................CAATCAATGGCGGGCAACATGAAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.................CAACGCTGG-------------ACCACAATCAATGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.....................................................CGGGCAACATGAAGCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
droGri2
CAGCAGCA--------GCGTCAACAT----CATCA-----GCAGCAGCAGCAGCAGT-----TAAAACAGCAGCAACATCAG----C---------------AG---CAGA--------------------------AAAAAC----AGCAGCAGCAACAGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCTAAA-ACA-------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 10:43 AM