ID:

dsi_15504

 Coordinate:

x:11003663-11003855 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.3 -8.1 -8.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AGCGAGTGCGGGCGAGATAGAGCGACAACTCCTGTTCCCGGTTCGTCGTCGTTCGTCATTCCCATATTCGCTTCTCGTATTCCCTCTCATTCCCATTCGCAATCCCAATTCCCAATTCCCGTCACACGAGTTAGCAGCACATCGCACAGCTGCATCGCTCCGCTCCGATCCTTTTTAATTTTTTGTTGTGCTTTCGGTGGCGTGCTCATTTCGAGAACAGAGTAACCCCTTTTTATTTGTCAGTTGTCAACGGCGCCCCTGCAGGCAGAAAGCAGAAGCAGAAACTGAAACAG
**************************************************************************************************************************************.(((((((((...(((.((...))...))).)))..................)))))).....************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 O001
Testis
 SRR902009
testis
 GSM343915
embryo
 M024
male body
............................CTCCTGTTCCCGGTTCGTCGTCG.................................................................................................................................................................................................................................................. 23 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0
......................................................................................................................................CAGCACATCGCACAGCTG............................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................TCGTCGTTCGTCATTCCCATAT.................................................................................................................................................................................................................................. 22 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...................................TCCCGGTTCGTCGTCGTTCGT............................................................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AATTTTTTGTTGTGCTTTCGG................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................TTCCCGGTTCGTCGTCGTTCGT............................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GCAGCACATCGCACAGCTG............................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................TCCCATATTCGCTTCTCGTATT.................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................TCAACGGCGCCCCTGCAGGC........................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......TGCGGGCGAGATAGAGCGACAA......................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............AGATAGAGCGACAACTCC..................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...................................TCCCGGTTCGTCGTCGTTCGG............................................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................GTTCCCGGTTCGTCGTCGTTC............................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........GGGCGAGATAGAGCGAC........................................................................................................................................................................................................................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GATCCTTTTTAATTTTTTG............................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................TTCGTCATTCCCATATTC................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................GTGGCGTGCTCATTTCGAGAA............................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................TTATTTGTCAGTTGTCAACGG........................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGTGCTTTCGGTGGCGTGCTC...................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GTTGTGCTTTCGGTGGCGTGC........................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTTGTTGTGCTTTCGGTGGCG........................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGCTCATTTCGAGAACAGAGTA..................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....AGTGCGGGCGAGATAGAGCGACAACT....................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................CTCTCCTGTAGGCAGAAAGCA................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
....................AGCGACAACTCCTGTTCC............................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................CGACAACTCCTCTCCCCGGTG.......................................................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................CGTGCTCCTGTCGAGAA............................................................................ 17 2 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................CAAATCCTGTTCCCG............................................................................................................................................................................................................................................................. 15 1 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................TTTGGTGGCGTGCTC...................................................................................... 15 1 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................GAAAGGAGAAGCAGAACC........ 18 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
....................................CACTGTTCGTCGTCGTT................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TCGCTCACGCCCGCTCTATCTCGCTGTTGAGGACAAGGGCCAAGCAGCAGCAAGCAGTAAGGGTATAAGCGAAGAGCATAAGGGAGAGTAAGGGTAAGCGTTAGGGTTAAGGGTTAAGGGCAGTGTGCTCAATCGTCGTGTAGCGTGTCGACGTAGCGAGGCGAGGCTAGGAAAAATTAAAAAACAACACGAAAGCCACCGCACGAGTAAAGCTCTTGTCTCATTGGGGAAAAATAAACAGTCAACAGTTGCCGCGGGGACGTCCGTCTTTCGTCTTCGTCTTTGACTTTGTC
************************************************************************************************.(((((((((...(((.((...))...))).)))..................)))))).....************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 O002
Head
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
.............................................................................................................................................................................................................AGTAAAGCTCTTGTCTCAT..................................................................... 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................CCGCGGGGACGTCCGTCTTTC..................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................AGCGTGTCGACGTAGCGAGGC................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.............................................AGCAGCAAGCAGTAAGGGTAT................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GTAAAGCTCTTGTCTCAT..................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................GACGTAGCGAGGCGAGGCTAG........................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................GGCGAGGCTAGGAAAAATTA.................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
................................................................................AGGGAGAGTAAGGGTAAGCGT................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGCGAGGCTAGGAAAAATTAA................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................CGTCTTTCGTCTTCGTCTTTGA....... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................TCGTGTAGCGTGTCGACGT........................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...........................................................AGGGTATAAGCGAAGAGCATA..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................CGTTAGGGTTAAGGGTTA................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................AGTCAACAGTTGCCGCGGGGA................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CACGAGTAAAGCTCTTGTC......................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................TAGCGTGTCGACGTAGCGAGG.................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
............................................................................................................................GTGCTCAATCGTCGTGTAGCG.................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................GTGTGCTCAATCGTCGTGTAGC..................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................GGGCCAAGCAGCAGCAAGCA............................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................GCAGTGTGCTCGATCGTCGTGT........................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................CGAGAGGACATCCGTCTTT...................... 19 3 12 0.83 10 0 0 0 10 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GCGGGGATGTCCGTATT....................... 17 2 5 0.80 4 4 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................CGAGAGGACATCCGTCTT....................... 18 3 20 0.50 10 0 0 0 10 0 0 0 0 0 0
....................................................AGCAGGAAGGTGATAAGCGAA............................................................................................................................................................................................................................ 21 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0
...........................................................................GCATAAGGGAAAGTAAG......................................................................................................................................................................................................... 17 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TAGGAACAATAGAAAAACAAC......................................................................................................... 21 3 12 0.25 3 0 1 0 0 1 1 0 0 0 0
..............................CGACAAGGGCCAAGC........................................................................................................................................................................................................................................................ 15 1 12 0.25 3 0 0 0 0 0 0 0 0 0 3
.................................................................................................................................................................................................................AATCTCTTGTCTCATT.................................................................... 16 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..............................GGACCAGGGCCAAGC........................................................................................................................................................................................................................................................ 15 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................GCGGGGATGTCCGTATTA...................... 18 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CGTCGTGTAGTGTGTCGC.............................................................................................................................................. 18 2 13 0.08 1 0 0 1 0 0 0 0 0 0 0
..............................................................GTATAAGCGAAGAGA........................................................................................................................................................................................................................ 15 1 18 0.06 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................AGGGGAGTGTCCTCAA................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
............GCTCTTTCTCGATGTTG........................................................................................................................................................................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................GCCGGGGGGACGTTCGTTT........................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:11003613-11003905 - dsi_15504 AGCGAGTGCGGGCGAGATAGAGCG--A---------------CAACTCCTGTTCCCGGTTCGTCGT----CGTTC-GTCATTCCCATATTCGCT-TCTCGTATTCCC--TC-TCATTCCCATTCGCAATCCCAATTCCCAATTCCCGTCACACGAGTTAGCAG----------------CACATCGCACAGCTGCATCGC-----TCCGCTCCGATCCTT---------------TTTAATTTTTTG-----TTGTGCT--TTCGGTGGCGTGCTCATTTC-G--AGAACAGAG------------------------TAA-CCCCTT-TTT-A-TTTGT-------CAGTTGTCAACGGCGCCCCTG------------CAGGCAGAAAGCAGA-----AGCAGAAACTGAAACAG
droSec2 scaffold_36:297798-298083 - AGCGAGTGCGGGCGAGATAGAGCG--A---------------CAACTCCTGTTCCCGGTTCGTCGT----CGTTC-GTCATTCCCATATTCGCT-TCTCGTATTCCC--TC-TCATTCCCATTCGCAAT-------CCCAATTCCCGTCACACGAGTTAGCAG----------------CACATCGCACAGCTGCATCGC-----TCCGCTCCGATCCTT---------------TTTAATTTTTTG-----TTGTGCT--TTCGGTGGCGTGCTCATTTC-G--AGAACAGAG------------------------TAA-CCCCTT-TTT-A-TTTGT-------CAGTTGTCAACGGCGCCCCTG------------CAGGCAGAAAGCAGA-----AGCAGAAACTGAAACAG
dm3 chrX:11608767-11609053 - ACCGAGTGCGGGCGAGATAGAACG--A---------------CAACTCCTGTTCCCGGTTCGTCGT----CGTTC-GTCATTCCCATATTCGCT-TCTCGTATTCCC--TC-CCATTCCCATTCGCAATCCCAATTCCCAATTCCCGTCACACGAGTTAGCAG----------------CACATCGCACAGCTGCATCGC-----TCCGCTCCGATCCTT---------------TTTAATTTTTTG-----TTGTGCC--TTCGGTGGCGTGCTCATTTC-G--AGAACAGAG------------------------TAA-CCCCTT-TTT-A-TTTGT-------CAGTTGTCAACGGCGCCCCTG------------CAGGCAGAAAGCAG-----------AAACTGAAACAG
droEre2 scaffold_4690:3578050-3578333 + AGCGAGTGCGGGCGAGATAGAGCG--A---------------CAACTCCTGTTCCCGGTTCGCCGT----CGTTT-GTCTTTCCCATATTCGCT-TCTCGTATTCC-------CATTCGCATTCGCAATCCCAATTCCCAATTCCCGTCACACGAGTTAGCAG----------------CACATCGCACAGCTGCATCGC-----TCCGCTCCGATCCTT---------------TTTC-TTTTTTG-----TTGTGCT--TTCTGTGGCGTGCTCATTTG-G--AGAACAGAG------------------------TTACCCCCTT-TTTCA-TTTGT-------CGGTTGTCAACGACGCCCCTG------------CAGGCAGAAAGCAG-----------AAACTGAAACAG
droYak3 X:15076875-15077174 + AGTGAGTGCGGGCGAGATAGAGCG--A---------------CAACTCCTGTTCCCGGTTCGTCGT----CGTTC-GTCATTCCCATATTCGCT-TCTCGTATTCCCATTC-CCATTCGCATTCGCAATCCCAATTCCCAATTCTCGTCACACGAGTTAGCAG----------------CACATCGCACAGCTGCAACGCTCAGCTCCGCTCCGATCCTT---------------TTTC-TTTTTTG-----TTGTGCT--TTCTGTGGCGTGCTCATTTG-G--AGAACAGAG------------------------TTACCCCCTT-TTC-A-TTTGT-------CGGTTGTCAACGACGCCCCTG------------CAGGCAGAAAGCAGA-----AGCAGAGACTGAAACAG
droEug1 scf7180000409528:35074-35342 + AGCGAGTGCGGGCGAGATAGAGCG--A---------------CAACTCCTGTTCCCGGTTCG---------------TCATTCCCATATTCTTATTCCCGT--------------------------------ATTCCCAATTCCCGTCACACGAGTTAACAGCGCAGAGCG-------TACATCGCACAGCTGCATCGC-----A----TCCGATCCTT---------------TTTTACTTTTTG-----T--------TTTTGTGGCGTGCTCTTTTG-GT---AGTA--ACACCAGTGAACACCG-----CTCGTAA-CCCCTT-TTT---TGTAT-------TGGTTGGTAACGACGCCCCTG------------TAGGCAGAAAGCAGA-----GGCAGAAGCAGAAACAG
droBia1 scf7180000298389:1408916-1409185 - AGCGAGTGCGGGCGAGACAGAGCGACA---------------CAACTCCTGTTCCCGGCTCGTT--------TTC-GTCATTCCCATGTT------CCCGTATTCCCA-TCTCC-------------------ATTCCC-ATTCCCGTCACACGAGTTAGCGGCGCAGAGCG-------CACACCGCACAGCTGCAT--------------CCGATCCTT---------------TTT---TCGTTG-----TTG---T--TTTGGTGGCGTGCTCT---TGGC---AGTA--AC----GTGAGCACCG-----CACATAA-CCCCTT-TTT----TTGT-------CGGTTGGCAACGACGCCCCTG------------CAGCCAGAAAGCAGA-----GGCAGAGGCAGAAGCAG
droTak1 scf7180000414375:267493-267757 + AGCGAGTGCGGGCGAGACAGAGCG--A---------------CAACTCCTGTTT-----------------------TCATTCCCATATTCCCA-TCTCGTCT---------CC-------------------ATTCCC-ATTCCCGTCACACGAGTTAGCAGCGCAGAGCGCATATCGCACATCGCACAGCTGCAT--------------CCGATCCTTTTTCACTG--------T---TGTACTGTTGTAC--TGCTGTTCTGGTGGCGTGCTCT---TGGC---AGTAGC----------------------TCGTAA-CCCCTT-TTC-----TAT-------CGGCTGGCAGCGACGCCCCTG------------CAGGCAGAA-GCAGAGGCGAGGCAGAGGCAGAAACAG
droEle1 scf7180000491023:561078-561273 + AGCAAGTGCGGGCGAGATAG--CT--A---------------CAACTCCTGTTCCCGGTTCGTT---------TT-GTCATTCCCAT------------------------TCC-------------------ATTCCCAGTTCCCGTCACACGAGTTAGCAGC---------------------GCACAGCTGCATCGG------------AGATCCTT---------------TTT---------------------------GTGGCGTGCTC------G--CTAACA---------------------------TAA-CCCCTT-TTT------AT-------TGGTTGCCAACGACGCCCATGCT---------ACAGGCAGAAAGCAGA-----AACAGAA----------
droRho1 scf7180000777256:51997-52192 + AGTAAGTGCGGGCGAGATAG--CT--A---------------CAACTCCTGTTCCCGGTTCGTT---------TT-GTCATTCCCAT------------------------TCC-------------------ATTCCCAATTCCCGTCACACGAGTTAGCAGC---------------------GCACAGCTGCAT--------------CCGA-------------GATCCTTTTT---------------------------GTGGCGTGCTC------G--CGAACA---------------------------TAA-CCCCTT-TT--A-T---T-------CGGTTGCCAACGACGCCCCTGCG---------ACAGGCAGAAAGCAGA-----AACAGAA----------
droFic1 scf7180000453277:74911-75140 - CGCGAGTGCGGGCGAGATAGA--C--A---------------CAACTCCTGTTCCCGGTTTCCCGTTTTCCGTTTCGTCATTCCCAT------------------------------------------------TCCAAATTCCCGTCACACGAGTTAGCAGCGCACAC---ACTT---CCATCGCACAGCTGCAACT--------CGCTTCGA-------------GATCCTTTTT---------------------------GTAGCGTGCTC------GCAGCAACA---------------------------TAA-CCCCTT-TTATATTCTGTT------GGGTTACCAACGACGCCCCTG------------CAGGCAGAAAGCAGA-----AGCAGAA------AC--
droAna3 scaffold_13117:4683396-4683594 + AGCTAGAGCGGGCGAGATAG--CG--A---------------TAGCTCCTGTTACCAGTTCGTAGT---------------TCCC---------------------------------------------------------------------AGTTAG----GCAGGC---AGTT---GTCTTCCACAGCTGCAC-G-------------CTATCCTT----------------TT---------------------------GTGTTGTCGTCA-----------------CACC----------GTGTTTAAATCGC-CCCCCTTTTT-T-TGTGTTCAGGCCTGTTTGGCATCGACGCCCCTGTC---------ACAGGCAGAA----GA-----AGAAGAAGCAGAGAAGG
droBip1 scf7180000393074:8168-8376 - AGCGAGAGCGGTAGAGATAG--CG--A---------------TAGCTCCTGTTACCAGTTCGCAGT---------------TCGC---------------------------------------------------------------------AGTAA---------GGCA--GT-----TGTTCCACAGCTGCAC-G-------------CTATCCTT----------------TT------GTG-----GTGTGTT--GTCGG-----------------C---A------CACC----------GTATCGAACTGAA-CCCCCT-TT--G-TGTGTTCAGGCCTGGTTGGCAGCGACGCCCCTGATCCACGGCACACAGGCAGAAAGCAAA-----AGAAGAAGCAGAGGCAA
dp5 XL_group1a:2306080-2306278 + GACGAGTGCGAGCGAGACAGAG----ATAACGCTGGAAATTCCAACTCCTGTTACTGCTTAGCTCT----GCTTC-G----------------------------------------------------------------TTCCTGCCATACGAGTTTGTACTT--------GGTT--CACGT-TCACAGCTGCATCC-------------------T----------------TTT--------G-----TGGTGTG--TTTCGCGCTGC-TTCTTTCC-G--ACAGCACAAC----GTC-----------------GA-CACCCT-CC------TG--------CTGTTGCCAACGACGCCACTGGC-------------------------------------------ACGG
droPer2 scaffold_28:743061-743259 + GGCGAGTGCGAGCGAGACAGAG----ATAACGCTGGAAATTCCAACTCCTGTTACTGCTTAGCTCT----GCTTC-G----------------------------------------------------------------TTCCTGCCATACGAGTTTGTACTT--------GGTT--CACGT-TCACAGCTGCATCC-------------------T----------------TTT--------G-----TGGTGTG--TTTCGCGCTGC-TTCTTTCC-G--ACAGCACAAC----GTC-----------------GA-CACCCT-CC------TG--------CTGTTGCCAACGACGCCACTGGC-------------------------------------------ACGG
droGri2 scaffold_14853:1541390-1541412 - AGCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGAGCAAGAATAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGCGAGTGCGGGCGAGATAGAGCG--A---------------CAACTCCTGTTCCCGGTTCGTCGT----CGTTC-GTCATTCCCATATTCGCT-TCTCGTATTCCC--TC-TCATTCCCATTCGCAATCCCAATTCCCAATTCCCGTCACACGAGTTAGCAG----------------CACATCGCACAGCTGCATCGC-----TCCGCTCCGATCCTT---------------TTTAATTTTTTG-----TTGTGCT--TTCGGTGGCGTGCTCATTTC-G--AGAACAGAG------------------------TAA-CCCCTT-TTT-A-TTTGT-------CAGTTGTCAACGGCGCCCCTG------------CAGGCAGAAAGCAGA-----AGCAGAAACTGAAACAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................CTCCTGTTCCCGGTTCGTCGT----CG.........................................................................................................................................................................................................................................................................................................................................................2313.00300300000000000000
................................................................................................................................................................CAG----------------CACATCGCACAGCTG...............................................................................................................................................................................................................................1812.00220000000000000000
..............................................................TCGT----CGTTC-GTCATTCCCATAT........................................................................................................................................................................................................................................................................................................................................2212.00200000000000020000
....................................................TCCCGGTTCGTCGT----CGTTC-GT...................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
..............................................................................................................................................................................................................................................AATTTTTTG-----TTGTGCT--TTCGG.......................................................................................................................................................2111.00100000001000000000
...................................................TTCCCGGTTCGTCGT----CGTTC-GT...................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
...............................................................................................................................................................GCAG----------------CACATCGCACAGCTG...............................................................................................................................................................................................................................1911.00110000000000000000
.................................................................................TCCCATATTCGCT-TCTCGTATT.........................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................TCAACGGCGCCCCTG------------CAGGC................................2011.00100000000001000000
......TGCGGGCGAGATAGAGCG--A---------------CAA....................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
..............AGATAGAGCG--A---------------CAACTCC................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
....................................................TCCCGGTTCGTCGT----CGTTC-GG...................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..................................................GTTCCCGGTTCGTCGT----CGTTC-.....................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.........GGGCGAGATAGAGCG--A---------------C......................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.....................................................................................................................................................................................................................GATCCTT---------------TTTAATTTTTTG-----.....................................................................................................................................................................1911.00100000100000000000
........................................................................TTC-GTCATTCCCATATTC......................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
.........................................................................................................................................................................................................................................................................GTGGCGTGCTCATTTC-G--AGAA................................................................................................................................2111.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................TT-A-TTTGT-------CAGTTGTCAACGG.........................................................2111.00100000001000000000
.............................................................................................................................................................................................................................................................TGTGCT--TTCGGTGGCGTGCTC.............................................................................................................................................2111.00100000000001000000
......................................................................................................................................................................................................................................................G-----TTGTGCT--TTCGGTGGCGTGC...............................................................................................................................................2111.00100000000001000000
...................................................................................................................................................................................................................................................TTTG-----TTGTGCT--TTCGGTGGCG..................................................................................................................................................2111.00100000000000010000
...............................................................................................................................................................................................................................................................................TGCTCATTTC-G--AGAACAGAG------------------------TA.................................................................................................2211.00100000000001000000
....AGTGCGGGCGAGATAGAGCG--A---------------CAACT..................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
....................AGCG--A---------------CAACTCCTGTTCC..........................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
droSec2
AGCGAGTGCGGGCGAGATAGAGCG--A---------------CAACTCCTGTTCCCGGTTCGTCGT----CGTTC-GTCATTCCCATATTCGCT-TCTCGTATTCCC--TC-TCATTCCCATTCGCAAT-------CCCAATTCCCGTCACACGAGTTAGCAG----------------CACATCGCACAGCTGCATCGC-----TCCGCTCCGATCCTT---------------TTTAATTTTTTG-----TTGTGCT--TTCGGTGGCGTGCTCATTTC-G--AGAACAGAG------------------------TAA-CCCCTT-TTT-A-TTTGT-------CAGTTGTCAACGGCGCCCCTG------------CAGGCAGAAAGCAGA-----AGCAGAAACTGAAACAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................TC-G--AGAACAGAG------------------------TAA-CCCCTT-........................................................................................2111.0010100
.................................................................................................................................................................................................................................................TTTTTG-----TTGTGCT--TTCGGTGG....................................................................................................................................................2111.0010001
..................AGAGCG--A---------------CAACTCCTGTTCC..........................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...........................................................................................................................................................................................ACAGCTGCATCGC-----TCCGCTC.............................................................................................................................................................................................................2011.0010010
................................................................................................................................T-------CCCAATTCCCGTCACACGAGTT...................................................................................................................................................................................................................................................................2311.0010010
.................................................................................................................................................................AG----------------CACATCGCACAGCTGC..............................................................................................................................................................................................................................1811.0010010
..................................................................................................................ATTCCCATTCGCAAT-------CCCAATTCCCGTCA...........................................................................................................................................................................................................................................................................2911.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGCAGA-----AGCAGAAACTG......2111.0010100
....................................................................................................................................................................................................................................................................................ATTTC-G--AGAACAGAG------------------------TAA-CCC............................................................................................2111.0010100
....................................................................................................................................................................................................................................................................................................................................................................ACGGCGCCCCTG------------CAGGCAGAA............................2111.0011000
...............GATAGAGCG--A---------------CAACTCCTGTTCCCGG.......................................................................................................................................................................................................................................................................................................................................................................2611.0011000
......................................................................................................................................................CACGAGTTAGCAG----------------CACATCGC......................................................................................................................................................................................................................................2111.0010100
dm3
ACCGAGTGCGGGCGAGATAGAACG--A---------------CAACTCCTGTTCCCGGTTCGTCGT----CGTTC-GTCATTCCCATATTCGCT-TCTCGTATTCCC--TC-CCATTCCCATTCGCAATCCCAATTCCCAATTCCCGTCACACGAGTTAGCAG----------------CACATCGCACAGCTGCATCGC-----TCCGCTCCGATCCTT---------------TTTAATTTTTTG-----TTGTGCC--TTCGGTGGCGTGCTCATTTC-G--AGAACAGAG------------------------TAA-CCCCTT-TTT-A-TTTGT-------CAGTTGTCAACGGCGCCCCTG------------CAGGCAGAAAGCAG-----------AAACTGAAACAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................ACACGAGTTAGCAG----------------CACATCG.......................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000001000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................AACGGCGCCCCTG------------CAGGCAGAAAGC.........................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................G-----TTGTGCC--TTCGGTGGCGTGC...............................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000001000000
......................................................................................................................................................CACGAGTTAGCAG----------------CACATCG.......................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010001000000000000000000
.............................................CTCCTGTTCCCGGTTCGTCGT----C..........................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................A-TTTGT-------CAGTTGTCAACGGCGCCCCTG------------C....................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCGGGCGAGATAGAACG--A---------------.......................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TGTGCC--TTCGGTGGCGTGCTCATTTC-G--....................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTGTGCC--TTCGGTGGCGTGCT..............................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................G----------------CACATCGCACAGCTGCATCGC-----....................................................................................................................................................................................................................2212.0020000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ATCGCACAGCTGCATCGC-----TC..................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TTCCCGGTTCGTCGT----CGTTC-G....................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
..........................A---------------CAACTCCTGTTCCCGGTTCGTCG................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................A-TTTGT-------CAGTTGTCAACGGCG.......................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................ACGAGTTAGCAG----------------CACATCGCA.....................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TT-TTT-A-TTTGT-------CAGTTGTCAACG..........................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TCCCAATTCCCGTCACACGAG.....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CACGAGTTAGCAG----------------CACATCGC......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CCTGTTCCCGGTTCGTCGT----CG.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................CAACGGCGCCCCTG------------CAGGCAGAA............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CCTG------------CAGGCAGAAAGCAG-----------AAACTG......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................GTTAGCAG----------------CACATCGCAC....................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GTCACACGAGTTAGCAG----------------C.............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................ACGAGTTAGCAG----------------CACATCGCACAG..................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................G------------CAGGCAGAAAGCAG-----------AAA.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................ATTTC-G--AGAACAGAG------------------------TAA-CCCCTT-TTT-....................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CTCATTTC-G--AGAACAGAG------------------------TAA-CCC............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................T-A-TTTGT-------CAGTTGTCAACGGC........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................ACGGCGCCCCTG------------CAGGCAGAAAGC.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CGGTGGCGTGCTCATTTC-G--AGA.................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAGATAGAACG--A---------------CAACTCCT...............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GCGTGCTCATTTC-G--AGAACAGAG------------------------TAA-C..............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CATCGCACAGCTGCATCGC-----TCCGC...............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................T-------CAGTTGTCAACGGCGCCCCT..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CATTTC-G--AGAACAGAG------------------------TAA-CC.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............AGATAGAACG--A---------------CAACTCCTGTT............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................ACGAGTTAGCAG----------------CACATCG.......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................GTCACACGAGTTAGCAG----------------CACA..........................................................................................................................................................................................................................................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................CGAGTTAGCAG----------------CACATCGCACAGCTG...............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................ATCCCAATTCCCAATTCCCGTC............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AATTTTTTG-----TTGTGCC--TTCGGTGGCG..................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................TGTTCCCGGTTCGTCGT----CGT........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CATTCCCATTCGCAATCCCAA...........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTTCCCGGTTCGTCGT----CGTTC-GTCATT...............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AGTTAGCAG----------------CACATCGCACAG..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.CCGAGTGCGGGCGAGATAGAACG--A---------------CAACT..................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CTGTTCCCGGTTCGTCGT----CGTT.......................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................GCTGCATCGC-----TCCGCTCCGATCCT......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ATTCCCATTCGCAATCCCAAT..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................ACTCCTGTTCCCGGTTCGTCGT----C..........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................................................................................ATCGCACAGCTGCATCGC-----TCC.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCGGGCGAGATAGAACG--A---------------CAACTCCT...............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................CATCGCACAGCTGCATCGC-----TC..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CGTGCTCATTTC-G--AGAACA..............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GTCAACGGCGCCCCTG------------CAGGC................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAAGCAG-----------AAACTGAAAC..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACACGAGTTAGCAG----------------CACAT.........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................TCAACGGCGCCCCTG------------CAGGCAGAAAGCA........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................ACTCCTGTTCCCGGTTCG...................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CAGCTGCATCGC-----TCCGCTCCG...........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................ACTCCTGTTCCCGGTTCGTCGT----G..........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................AGCAG----------------CACATCGCACAGCT................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GAGTTAGCAG----------------CACATCGCA.....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................ATTCGCT-TCTCGTATTCCC--TC-CCC..............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGCAG-----------AAACTGAAACA.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGAGTGCGGGCGAGATAGA............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................ATTCCCATATTCGCT-TCTCGT............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGGGCGAGATAGAACG--A---------------CAAC...................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................G------------CAGGCAGAAAGCAG-----------AAACTGAAACA.2611.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................G----------------CACATCGCACAGCTGCATCG..........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..CGAGTGCGGGCGAGATAGAACG--A---------------CAACTC.................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CCCCTT-TTT-A-TTTGT-------CAGTTGT...............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................AATCCCAATTCCCAATTCCCG..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AACGGCGCCCCTG------------CAGGCAGA.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................ACGAGTTAGCAG----------------CACATCGC......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CCCGTCACACGAGTTAGCAG----------------CACATCGC......................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................GCT-TCTCGTATTCCC--TC-CC...............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TCACACGAGTTAGCAG----------------CACATCG.......................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCGGGCGAGATAGAACG--A---------------CAACTCC................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCAATTCCCGTCACACGAGTTAGCAG----------------CA............................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................C--TTCGGTGGCGTGCTCATTTC-G--AGAAC...............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TGTGCC--TTCGGTGGCGTGCTCATTT.........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACCGAGTGCGGGCGAGATAG.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................ACAGCTGCATCGC-----TCCGCTCC............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................ACGGCGCCCCTG------------CAGGCAGAAAG..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GTCAACGGCGCCCCTG------------CAGGCAGAAAG..........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
..................................................................................CCCATATTCGCT-TCTCGTATTCC.......................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GTGCTCATTTC-G--AGAACAGAG------------------------TAA-CC.............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................TTCCCAATTCCCGTCACACGAGTTAGC................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................ATTCCCAATTCCCGTCACACG.......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CGCACAGCTGCATCGC-----TCCGCT..............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TT---------------TTTAATTTTTTG-----TTGTGC...............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TTCGGTGGCGTGCTCATTTC-G--AGAACA..............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TTTTG-----TTGTGCC--TTCGGTGGCGTG................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TT-TTT-A-TTTGT-------CAGTTGTCAA............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................CGGCGCCCCTG------------CAGGCAGAA............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGCGAGTGCGGGCGAGATAGAGCG--A---------------CAACTCCTGTTCCCGGTTCGCCGT----CGTTT-GTCTTTCCCATATTCGCT-TCTCGTATTCC-------CATTCGCATTCGCAATCCCAATTCCCAATTCCCGTCACACGAGTTAGCAG----------------CACATCGCACAGCTGCATCGC-----TCCGCTCCGATCCTT---------------TTTC-TTTTTTG-----TTGTGCT--TTCTGTGGCGTGCTCATTTG-G--AGAACAGAG------------------------TTACCCCCTT-TTTCA-TTTGT-------CGGTTGTCAACGACGCCCCTG------------CAGGCAGAAAGCAG-----------AAACTGAAACAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................CTCCTGTTCCCGGTTCGCCG................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
........................................................................TTT-GTCTTTCCCATATTCGCT-T.................................................................................................................................................................................................................................................................................................................................2211.0010000010
.....................................................................................................................................................................................................................................................................................................................................CTT-TTTCA-TTTGT-------CGGTTGTC..............................................................2111.0010000010
..................................................................................................................................................................................................................................................................................................................................................................CAACGACGCCCCTG------------CAGGCAT..............................2111.0011000000
...........................................................................................................................................................GTTAGCAG----------------CACATCGCACAG..................................................................................................................................................................................................................................2011.0010000010
...................................................................................CCATATTCGCT-TCTCGTT...........................................................................................................................................................................................................................................................................................................................1820.5010000010
droYak3
AGTGAGTGCGGGCGAGATAGAGCG--A---------------CAACTCCTGTTCCCGGTTCGTCGT----CGTTC-GTCATTCCCATATTCGCT-TCTCGTATTCCCATTC-CCATTCGCATTCGCAATCCCAATTCCCAATTCTCGTCACACGAGTTAGCAG----------------CACATCGCACAGCTGCAACGCTCAGCTCCGCTCCGATCCTT---------------TTTC-TTTTTTG-----TTGTGCT--TTCTGTGGCGTGCTCATTTG-G--AGAACAGAG------------------------TTACCCCCTT-TTC-A-TTTGT-------CGGTTGTCAACGACGCCCCTG------------CAGGCAGAAAGCAGA-----AGCAGAGACTGAAACAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................ATTCCCAATTCTCGTCAC..........................................................................................................................................................................................................................................................................1811.00110000000000
.............................................................................................................................................TTCTCGTCACACGAGTTAGCA...............................................................................................................................................................................................................................................................2111.00101000000000
..................................................................................................................................................................G----------------CACATCGCACAGCTGCAACGCT........................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGA-----AGCAGAGACTG......1811.00100100000000
.................................................................................................................................................................................................................CTCCGATCCTT---------------TTTC-TTTTTTG-----TTGTGCT--............................................................................................................................................................2911.00100000010000
droEug1
AGCGAGTGCGGGCGAGATAGAGCG--A---------------CAACTCCTGTTCCCGGTTCG---------------TCATTCCCATATTCTTATTCCCGT--------------------------------ATTCCCAATTCCCGTCACACGAGTTAACAGCGCAGAGCG-------TACATCGCACAGCTGCATCGC-----A----TCCGATCCTT---------------TTTTACTTTTTG-----T--------TTTTGTGGCGTGCTCTTTTG-GT---AGTA--ACACCAGTGAACACCG-----CTCGTAA-CCCCTT-TTT---TGTAT-------TGGTTGGTAACGACGCCCCTG------------TAGGCAGAAAGCAGA-----GGCAGAAGCAGAAACAGSizeHit CountTotal NormTotal
No Reads
droBia1
AGCGAGTGCGGGCGAGACAGAGCGACA---------------CAACTCCTGTTCCCGGCTCGTT--------TTC-GTCATTCCCATGTT------CCCGTATTCCCA-TCTCC-------------------ATTCCC-ATTCCCGTCACACGAGTTAGCGGCGCAGAGCG-------CACACCGCACAGCTGCAT--------------CCGATCCTT---------------TTT---TCGTTG-----TTG---T--TTTGGTGGCGTGCTCT---TGGC---AGTA--AC----GTGAGCACCG-----CACATAA-CCCCTT-TTT----TTGT-------CGGTTGGCAACGACGCCCCTG------------CAGCCAGAAAGCAGA-----GGCAGAGGCAGAAGCAGSizeHit CountTotal NormTotal
No Reads
droTak1
AGCGAGTGCGGGCGAGACAGAGCG--A---------------CAACTCCTGTTT-----------------------TCATTCCCATATTCCCA-TCTCGTCT---------CC-------------------ATTCCC-ATTCCCGTCACACGAGTTAGCAGCGCAGAGCGCATATCGCACATCGCACAGCTGCAT--------------CCGATCCTTTTTCACTG--------T---TGTACTGTTGTAC--TGCTGTTCTGGTGGCGTGCTCT---TGGC---AGTAGC----------------------TCGTAA-CCCCTT-TTC-----TAT-------CGGCTGGCAGCGACGCCCCTG------------CAGGCAGAA-GCAGAGGCGAGGCAGAGGCAGAAACAGSizeHit CountTotal NormTotal
No Reads
droEle1
AGCAAGTGCGGGCGAGATAG--CT--A---------------CAACTCCTGTTCCCGGTTCGTT---------TT-GTCATTCCCAT------------------------TCC-------------------ATTCCCAGTTCCCGTCACACGAGTTAGCAGC---------------------GCACAGCTGCATCGG------------AGATCCTT---------------TTT---------------------------GTGGCGTGCTC------G--CTAACA---------------------------TAA-CCCCTT-TTT------AT-------TGGTTGCCAACGACGCCCATGCT---------ACAGGCAGAAAGCAGA-----AACAGAA----------SizeHit CountTotal NormTotal
No Reads
droRho1
AGTAAGTGCGGGCGAGATAG--CT--A---------------CAACTCCTGTTCCCGGTTCGTT---------TT-GTCATTCCCAT------------------------TCC-------------------ATTCCCAATTCCCGTCACACGAGTTAGCAGC---------------------GCACAGCTGCAT--------------CCGA-------------GATCCTTTTT---------------------------GTGGCGTGCTC------G--CGAACA---------------------------TAA-CCCCTT-TT--A-T---T-------CGGTTGCCAACGACGCCCCTGCG---------ACAGGCAGAAAGCAGA-----AACAGAA----------SizeHit CountTotal NormTotal
No Reads
droFic1
CGCGAGTGCGGGCGAGATAGA--C--A---------------CAACTCCTGTTCCCGGTTTCCCGTTTTCCGTTTCGTCATTCCCAT------------------------------------------------TCCAAATTCCCGTCACACGAGTTAGCAGCGCACAC---ACTT---CCATCGCACAGCTGCAACT--------CGCTTCGA-------------GATCCTTTTT---------------------------GTAGCGTGCTC------GCAGCAACA---------------------------TAA-CCCCTT-TTATATTCTGTT------GGGTTACCAACGACGCCCCTG------------CAGGCAGAAAGCAGA-----AGCAGAA------AC--SizeHit CountTotal NormTotal
No Reads
droAna3
AGCTAGAGCGGGCGAGATAG--CG--A---------------TAGCTCCTGTTACCAGTTCGTAGT---------------TCCC---------------------------------------------------------------------AGTTAG----GCAGGC---AGTT---GTCTTCCACAGCTGCAC-G-------------CTATCCTT----------------TT---------------------------GTGTTGTCGTCA-----------------CACC----------GTGTTTAAATCGC-CCCCCTTTTT-T-TGTGTTCAGGCCTGTTTGGCATCGACGCCCCTGTC---------ACAGGCAGAA----GA-----AGAAGAAGCAGAGAAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................TCA-----------------CACC----------GTGTTTAAATCGC-C..............................................................................................2112.002000002
................................................................................................................................................................................................................................................................................CGTCA-----------------CACC----------GTGTTTAAATCGC-C..............................................................................................2311.001100000
..............................................................TAGT---------------TCCC---------------------------------------------------------------------AGTTAG----GCAGGC---A...................................................................................................................................................................................................................................................2111.001010000
droBip1
AGCGAGAGCGGTAGAGATAG--CG--A---------------TAGCTCCTGTTACCAGTTCGCAGT---------------TCGC---------------------------------------------------------------------AGTAA---------GGCA--GT-----TGTTCCACAGCTGCAC-G-------------CTATCCTT----------------TT------GTG-----GTGTGTT--GTCGG-----------------C---A------CACC----------GTATCGAACTGAA-CCCCCT-TT--G-TGTGTTCAGGCCTGGTTGGCAGCGACGCCCCTGATCCACGGCACACAGGCAGAAAGCAAA-----AGAAGAAGCAGAGGCAASizeHit CountTotal NormTotal
No Reads
dp5
GACGAGTGCGAGCGAGACAGAG----ATAACGCTGGAAATTCCAACTCCTGTTACTGCTTAGCTCT----GCTTC-G----------------------------------------------------------------TTCCTGCCATACGAGTTTGTACTT--------GGTT--CACGT-TCACAGCTGCATCC-------------------T----------------TTT--------G-----TGGTGTG--TTTCGCGCTGC-TTCTTTCC-G--ACAGCACAAC----GTC-----------------GA-CACCCT-CC------TG--------CTGTTGCCAACGACGCCACTGGC-------------------------------------------ACGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............GAGACAGAG----ATAACGCTGGAAATTCC......................................................................................................................................................................................................................................................................................................................................................................................2612.0020020000000
...................................................TTACTGCTTAGCTCT----GCTTC-.....................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................CTTAGCTCT----GCTTC-G----------------------------------------------------------------TTCCTG..............................................................................................................................................................................................................................................................................2111.0010100000000
............CGAGACAGAG----ATAACGCTGGA............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................TT--------GGTT--CACGT-TCACAGCTGC..............................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................T----------------TTT--------G-----TGGTGTG--TTTCGCG.....................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................T-CC------TG--------CTGTTGCCAACGACGCCAC...................................................2411.0010010000000
.....................................................................................................................................................................................CGT-TCACAGCTGCATCC-------------------T----------------TTT--------...........................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................CTGTTGCCAACGACGCCACT..................................................2011.0010100000000
..............AGACAGAG----ATAACGCTGGAAA..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
.........................................................CTTAGCTCT----GCTTC-G----------------------------------------------------------------TTCCTGC.............................................................................................................................................................................................................................................................................2211.0010100000000
......................................ATTCCAACTCCTGTTACTGCT......................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................TGTTGCCAACGACGCCACTG.................................................2011.0010100000000
.......................................................................CTTC-G----------------------------------------------------------------TTCCTGCCATACGAGT....................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................C-------------------T----------------TTT--------G-----TGGTGTG--TTTCGC......................................................................................................................................................1911.0010100000000
..............................................................................................................................................................TGTACTT--------GGTT--CACGT-TCAC....................................................................................................................................................................................................................................2011.0010100000000
droPer2
GGCGAGTGCGAGCGAGACAGAG----ATAACGCTGGAAATTCCAACTCCTGTTACTGCTTAGCTCT----GCTTC-G----------------------------------------------------------------TTCCTGCCATACGAGTTTGTACTT--------GGTT--CACGT-TCACAGCTGCATCC-------------------T----------------TTT--------G-----TGGTGTG--TTTCGCGCTGC-TTCTTTCC-G--ACAGCACAAC----GTC-----------------GA-CACCCT-CC------TG--------CTGTTGCCAACGACGCCACTGGC-------------------------------------------ACGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................T--CACGT-TCACAGCTGCATCC-------------------.......................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................................................................................................CC------TG--------CTGTTGCCAACGACGCC.....................................................2111.001100000
...........................................................................................................................................................GTTTGTACTT--------GGTT--CACGT-TC......................................................................................................................................................................................................................................2111.001000001
droGri2
AGCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGAGCAAGAATAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:07 PM