ID:

dsi_15481

 Coordinate:

2r:10768474-10768625 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.7 -36.7 -36.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGCCCAGGCGACACCAAAACGCAAAACGGAGAGTGTGTGTTATCAATGGAGTGTGTGTTCCCCAACGCCAAGTGAATTTTTTTCGTTGAGACCGAGGGACGGAAAAAAAATGGCGCCCGCAGCCAGAGCAACTTGACTTTCTTTTCGGTCCTATATAGTTAGTAGTTGCTTGCCCCCGTCTCGTCGTCGGCGAGCGAATTCGGTGATTTTATTTCGATTTCGTCGCAGTGCGATATCCCCAACGAAGAAAAC
******************************************************************************...(((((((((((...(((((((........((((.......))))(((((((((((((..................)))))..))))))))....)))))))))).)))))))).********************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 O001
Testis
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR902008
ovaries
 SRR1275487
Male larvae		 SRR1275483
Male prepupae
..............................................................................................................................................................................CCCGTCTCGTCGTCGGCGAGC......................................................... 21 0 1 4.00 4 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTTTCGTTGAGACCGAGGGA......................................................................................................................................................... 21 0 1 3.00 3 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTGCCCCCGTCTCGTCGTCG............................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AGCCAGAGCAACTTGACTT................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................GAATTTTTTTCGTTGAGACCGAGG........................................................................................................................................................... 24 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................GCTTGCCCCCGTCTCGTCGTC................................................................ 21 0 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................GCAACTTGACTTTCTTTTCGG........................................................................................................ 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................................GTTGAGACCGAGGGACGGAAA................................................................................................................................................... 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GTTGAGACCGAGGGACGGA..................................................................................................................................................... 19 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AGCGAATTCGGTGATTTTATA....................................... 21 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTGCCCCCGTCTCGTCGTT................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TTCGGTGATTTTATTTCGATTTCGTC............................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CTTTCTTTTCGGTCCTATA................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTGCCCCCGTCTCGTCGTCGTAA............................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TATTTCGATTTCGTCGCAGT....................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCGCAGTGCGATATCCCCAACGAAGA.... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................GATTTCGTCGCAGTGCGATAT................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................CCCCCGTCTCGTCGTCGGCTA........................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GCAAAACGGAGAGTGTGT...................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................CAAGTGAATTTTTTTCGTTGAGACCGA............................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................CGAATTCGGTGATTTTATTTCGATTT................................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATTTCGATTTCGTCGCAGTGT..................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TTTTGTTTCGATTTCGTCGCA......................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................ACGGAGAGTGTGTGTTATC................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTTTTTTCGTTGAGACCGAGG........................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTGCCCCCGTCTCGTCGTCG............................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CAACTTGACTTTCTTTTCGG........................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CAGTACGATATCCCCAACGAA...... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................TTGCTTGCCCCCGTCTCGTC................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCTATATAGTTAGTAGTTGCT.................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................AACGCAAAACGGAGAGTGTGT...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................CGTCTCGTCGTCGGCGAGCG........................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CGAGCGAATTCGGTGATTTTT......................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TATTTCGATTTCGTCGCAGTG...................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTATTTCGATTTCGTCGCAGTGCGATA................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................TTGAGACCGAGGGACGGAAAA.................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CTTGACTTTCTTTTCGGT....................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................ATTTTATTTCGATTTCGTCGC.......................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................TCGTTGAGACCGAGGGACGGA..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTTTCGTTGAGACCGAGGGT......................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AAAACGGAGAGTGTGTGTTAT................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................AAACGGAGAGTGTGTGTTT.................................................................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CCCCCGTCTCGTCGTCGGC............................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TGATTTTATTTCGATTTCGTC............................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTTCGATTTCGTCGCAGTGCGTTA................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTATTTCGATTTCGTCGCA......................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................CGCAAAACGGAGAGTGTGTG..................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................CCCCCGTCTCGTCGTCGGCGA........................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TGTTATCAATGGAGTGTGTGTT................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................AGAGTGTGTGTTATCAATGGA.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TATTTCGATTTCGTCGCAGTGCGATA................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTATTTCGATTTCGTCGCAGT....................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................AATTTTTTTCGTTGAGACCGTT............................................................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GAGCAACTTGACTTTCTTTTCGGTCCT.................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................GTTATCAATGGAGTGTGTG................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................GAATTTTTTTCGTTGAGACC............................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AAAACGCAAAACGGAGAGTG......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTTTCGTTGAGACCGAGGGT......................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GCGAGCGAATTCGGTGATTTT.......................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CCGCAGCCAGAGCAACTTGACT.................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................TGAATTTTTTTCGTTGAGACCGAGGGA......................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................GAGAGTGTGTGTTATCAATGGAGT........................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................ATGGCGCCCGCAGCCAGAGC........................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTGATTTTATTTCGATTTCGT............................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TGAATTTTTTTCGTTGAGACC............................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CGGAGAGTGTGTGTTATCAAT............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................AACTTGACTTTCTTTTCGGT....................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................TGCCCCCGTCTCGTCATCGGCGAGC......................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................AGCGAATTCGGTGATTTTATT....................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................GAATTTTTTTCGTTGAGACCGT............................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CCCGTCTCGCCGTCGGCGAG.......................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................ATTTATTTCGTTGGGACC............................................................................................................................................................... 18 2 9 0.56 5 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TGGCGAGCGAATTCGG................................................. 16 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................CGGAAAAAAATGGCGCCCGCA................................................................................................................................... 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................GAATTTATTTCGTTGGGACC............................................................................................................................................................... 20 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................AATTTATTTCGTTGGGACC............................................................................................................................................................... 19 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GTTGATATCGAGGGACGGA..................................................................................................................................................... 19 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................GCGGGCGAAGTCGGTGGTTTT.......................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................GTGTGTTATCAGTGGAGTT....................................................................................................................................................................................................... 19 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GAACGACGGACGGAAAAAAAAA............................................................................................................................................. 22 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CAAAACGGAGAGTTTG....................................................................................................................................................................................................................... 16 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................CGGCGAGCGAACGCGGT................................................ 17 2 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................TGTGAGACCGAGGGACG....................................................................................................................................................... 17 2 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................ACCGGAGGGTGTGTGTT................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................GAATTTTTTTCGTCG.................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................GTTGAGACCGTTTGACGG...................................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CAAAACGGAGAGTTT........................................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................AGGTACGGAAAAAAA............................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

GCGGGTCCGCTGTGGTTTTGCGTTTTGCCTCTCACACACAATAGTTACCTCACACACAAGGGGTTGCGGTTCACTTAAAAAAAGCAACTCTGGCTCCCTGCCTTTTTTTTACCGCGGGCGTCGGTCTCGTTGAACTGAAAGAAAAGCCAGGATATATCAATCATCAACGAACGGGGGCAGAGCAGCAGCCGCTCGCTTAAGCCACTAAAATAAAGCTAAAGCAGCGTCACGCTATAGGGGTTGCTTCTTTTG
*********************************************************...(((((((((((...(((((((........((((.......))))(((((((((((((..................)))))..))))))))....)))))))))).)))))))).****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 GSM343915
embryo
..............................................................................................................................................................................................................................AGCGTCACGCTATAGGGGTTG......... 21 0 1 4.00 4 0 0 0 1 0 0 2 0 0 0 1
.......................................................................................................................................................................CGAACGGGGGCAGAGCAGC.................................................................. 19 0 1 3.00 3 1 0 0 0 0 0 0 2 0 0 0
.......................................................................................................................................................................................................................................CTATAGGGGTTGCTTCTTTTG 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AACGAACGGGGGCAGAGCAGC.................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GCGTCACGCTATAGGGGTTGCTT...... 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................GGCGTCGGTCTCGTTGAACTG................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TTGGCGTCGGTCTCGTTGAAC..................................................................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
CGGGGTCCGCTGTGGTTTTGCGTT.................................................................................................................................................................................................................................... 24 2 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0
......................................................................................................................................................................ACGAACGGGGGCAGAGCAGCA................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GCAGCAGCCGCTCGCTTAAGC.................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..............................................................GTTGCGGTTCACTTAAAA............................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..GGGTCCGCTGTGGTTTTGCGT..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AGAAAAGCCAGGATATATCAA............................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................ATAGGGGTTGCTTCTTTTG 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......CCGCTGTGGTTTTGCGTTTTG................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................GCAGAGCAGCAGCCGCTCGCTT...................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................TGGTTGCGGTTCACTTAAAAAA.......................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GCTATAGGGGTTGCTTCTTTT. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................GTTTTGCCTCTCACACACA.................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CACGGGGGCAGAGCAGCAGC............................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................CGTTTTGCCTCTCACACA...................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................CGCGGGCGTCGGTCTCGTTGA....................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CGCTATAGGGGTTGCTTCTT... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TATATCAATCATCAACGAAC................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................GGGTTGCGGTTCACTTAAAAA........................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTACGCTATAGGGGTTGCTTCTT... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................CAAGGGGTTGCGGTTCACTTA............................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GCTATAGGGGTTGCTTCTTT.. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TTGAACGGGGGCAGAGCAGC.................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTCACGCTATAGGGGTTGCTT...... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................TTGCGGTTCACTTAAAAAAAG........................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GCAGCCGCTCGCTTAAGCCAC............................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................ACGAACGGGGGCAGAGCAGC.................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................CTCACACACAATAGTTACC........................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................TTTTGCCTCTCACACACAATA................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................AAAGCAACTCTGGCTCCCTGC....................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................AACGGGGGCAGAGCAGCA................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAGCCACTAAAATAAAGCTAA................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TATATCAATCATCAACGAACG............................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................AGGGGTTGCGGTTCACTTAAA............................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................GCAACTCTGGCTCCCTGCCT..................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
........................TTGCCTCTCACACACAATAGT............................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................TTACCGCGGGCGTCGGTCTCGT.......................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GAGCAGCAGCCGCTCGCTTA..................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TCGCTATAGTGGTTGCTTCTTT.. 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
GCGGGTCCGCTGTGGTTTTGC....................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................CACACAAGGGGTTGCGGTT..................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................GTCTCGTTGAACTGAAAGAAA............................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................CAATAGTTACCTCACACACAA................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.TGGGTCCGCTGTGGTTTTGC....................................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GGTAGAGCAGCAGCCGC............................................................ 17 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ACGCAATAGGGGGTGCT....... 17 2 11 0.18 2 0 0 1 0 0 0 0 0 1 0 0
..............................................................................................................................................AAAGGCAGGAGATATCAGT........................................................................................... 19 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0
....TTTTGCTGTGGTTTTGCGTTTT.................................................................................................................................................................................................................................. 22 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10768424-10768675 + dsi_15481 CGCCCAGGCGACAC-CAAAACGCAAAACGGAGA-----------------GTGTGTGTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAATTTTTTTCGTTGA---G------ACCGAGGG---ACGGAAAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTCC-TATATAGTTAGTAGT-----TGCTT------------GCCCCCGTCTCGTCGTCGGCGAGCGAATTCGGTGATTTTATTT--CGATTTCGTCGCAGT-GCGATAT--CCC-CAA-CG-----------------------------------------A--AGAAAAC--
droSec2 scaffold_1:7569015-7569265 + CGCCCAGGCGACAC-CAAAACGCAAAACGGAGA-----------------GTGTGTGTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAATTTTTTTCGTTGA---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTCC-TATATAGTTAGTAGT-----TGCTT------------GCCCCCGTCTCGTCGTCGGCGAGCGAATTCGGTGATTTTATTT--CGATTTCGTCGCAGT-GCGATAT--CCC-CAA-CG-----------------------------------------A--AGAAAAC--
dm3 chr2R:10061378-10061628 + CGCCAAGGCGACAC-CTAAACGCAAAACGGAGA-----------------GTGTGTGTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAATTTTTTTCGTTGA---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTCC-TATATAGTTAGTAGT-----TGCTT------------GCCCCCGTCTCGTCGTCGGCGAGCGAATTCGGTGATTTTATTT--CGATTTCGTCGCAGT-GCGATAT--CCC-CAA-CG-----------------------------------------A--AGAAAAC--
droEre2 scaffold_4845:15776358-15776601 - CGCCCAGGCGACACGCAAAACGCAAAA-------------------CCGAGTGTGTGTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAATTTTTTTCGTTGA---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----ACAAGT-----TGTTC------------GCCCCCATCTCGTCGTCGGCGAGCGAATGCGGTGATTTTATTT--CGATTTCGTCGCAGT-GCGATAT--ATCACAA--G-----------------------------------------A--A-GAAAC--
droYak3 2R:9997568-9997812 + CGCCCAGGCGACACGCAAAACGCAAAA-------------------CCGAGTGTGTGTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAATTTTTTTCGTTGA---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----ACAAGT-----TGTTC------------GCCCCCGTCTCGTCGTCGGCGAGCGAATGCGGTGATTTTAATT--CGATTTCGTCGCAGT-GCGATATATCCC-CAA--G-----------------------------------------A--A-GAAAC--
droEug1 scf7180000409462:2777904-2778146 - CGCCCACACGTCGC-CAAACAGCCAAATC-------------AAACCCGAG--AATGTTATCAATGAAGC---------------------------------------GT-TCCC------CA-ACGAACGCC---------AAGTGAATTTTTTTA---GA---C------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----A---GT-----AGTTC------------GCCCCCGTCTCGTCGTCGGCGAACGAATGCGGTGATTTT--TT--CGATTTCGTCGCAGT-GCGATAT--ACC-TAA-AAT--------------------------------------ATA--AAAAAGG--
droBia1 scf7180000301592:211968-212211 + CGCCCACACGTCGC-CAGAA-------------GTCCGCAAAAA--CCGCG--AGTGTTATCAATGGAGTGCTT------------------------------------TG-CCC------CA----AACGCC---------AATTGAATTTTTTTA---GA---GACCGT-GCCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAGAGC------------------------AGCA--ACTTGACTTTCTTTTCGGTC--CACAT----A---GT-----AGTTC------------GCCCCCGTCTCGTCGTCGGCGAACGAATGCGGTGATTTTCTGT--CGATTTCGTCGCAGT-GCGATAT--CCC-TA------------------------------------------------AGAAAAC--
droTak1 scf7180000414188:41628-41861 + CCCGCAAACGTCGC-AA-AAGCCAAA----------------AACCCCGAG--AGTGTTATCAATGAAGTGTGT------------------------------------TG-CCC------CA----AACGCC---------AAGTGAATTTTTTTA---GA---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----A---GT-----AGTTC------------GCCCCCGTCTCGTCGTCGGCGAACGAATGCGGTGATTTT--TT--CGACTTCGTCGCAGT-GCGATAT--CCC-C---CC-----------------------------------------A--AAAAAAT--
droEle1 scf7180000491349:810766-810989 - CGCCCAC--GTCGC-CA--------AA-------------------CCGAG--TGTGTTATCAATGAAGTA--------------------------------------GTG-CCC------CA-AC-AACGCC---------AACTACATTTTTT-A---GC---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----A---GT-----AGTTC------------GCCCCCGTCTCGTTG-CGGCGAACGAATGCGGTGATTTTCGTCGTGGTTTTCGTCGCAGT-GCGATAG--CCC-CCA--------------------------------------------A--AAAAGAT--
droRho1 scf7180000777200:379512-379737 + CGCCCAC--GTCGC-CAAAA---------------------------CGAG--TGTGTTATCAATGAAGTA--------------------------------------GTG-CCC------CA-AC-AACGCC---------AAGTAAATTTTTTTA---GA---C------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----A---GT-----AGTTC------------GCCCCCGTCTCGTTG-CGGCGAACGAATGCGGTGATTTTCGTCGTGGTTTTCGTCGCAGTTCCGATAG--CCC-CAA-C------------------------------------------A--A-AAAAA--
droFic1 scf7180000453948:366250-366491 - CGCCCACACGTCGC-AAGAA---AAAA-------------------CGGAG--AGTGTTATCAATGGAGTGCCA-----------------------------------GTG-CCC------C-----AACGCC---------AAGTGATTTTTTTTAA--GAGAAGACCGAGACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----A---GT-----AGTTC------------GCCCCCGTCTCGTCGTCGGCGAACGAATGCGGTGATTT----T--CGTTTTCGTCGCAGT-GCGATAG--CCC-AAA-AGG--------------------------------------AAA--AATAAAC--
droKik1 scf7180000302385:189713-189926 + CGCCCCCC-GAGGC-CACC------AC-------------------CCGAG--AGTGTTATCAGTGGAGCGAAC-------AC--------------------G-----GCG-CTC------CA----AACGCC---------AA-----------------------------------------AG-AAAAAAATGGCGCCCG---CAGCAGCGGA------------------------CTCT--GGCTGACTTTCTTTTCGTTCGGAATAT----A---GTCGTTCAGTTC------------GCCCCAGTCTCGTCGTCGGCGGACGAATGCGGTGATTTTCGTTAGCGTTTTCGTCGCAGT-GCGATC----CC-C-T-CG-----------------------------------------A----AACAC--
droAna3 scaffold_13266:5859499-5859734 - AAT--------------------------------------------CGAGTGTGTGTTATCAATGGATAA---------GGC--------------------A-----GCA-CGC------CA----AACGCCAGGCCA-AAAACTGAATTTTTCTCAC----------------TAGCG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCAAAACTTGACTTTCTTTTCGGTG--T--ATAGTTCG--GT-----CGTCT------------CGCCAAGTCTCGTCGTTGCCGCAGCAGTGC-GCGATCCC--------------------------------CC-CCA--G-AAAAGTGTATTTAGAACATCGCAGTGGCATCATCGAACC-AA-CAAAAAT--
droBip1 scf7180000395839:17842-18058 - AAC--------------------------------------------CGAGTGTGTGTTATCAATGGATAA---------GGC--------------------A-----GCA-CGC------C-----AACGCCAGGCCACAAAAGTGAATTTTTT-------------------CTAGCG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCAAAACTTGACTTTCTTTTCGGTG--T--ATAG---------------TTCGTC-------TCGC-CAAGTCTCGTTG--------------------------------------CCGCAGT-GCGCGAT--CCC-CCC-AG-AAAAGTGTAT-TAGAACATCGCAGTGGC------GAAGC-AGAA-AAAACTG
dp5 3:16289940-16290199 + CACACACA--T------------------AGAAGTGCG------------GTGCGCCTTATCAATGAACCGAGT-------------------CGCAGCCTGAGACCTAGCG-CCCTGGACCGAAAGG-----CACGCCACCGAAGTGAATTTGTT-------------------CGCAAG--AACGG-AAAAAAATGGCGCCCG---CAGCCACAGAAGCAAACCCAAACCCAAAAGCAAAAGCA--ACTTGACTTTCTTTTCGGTC--T--ATAG---------------TTCGTCGCCGTACTCGT-CTCGTCTCGTCGTCGACGA-CGAAT--------------------TTTCGTCGCAGT-GCGAT-----CC-CAAGTG----------------------------------------------AAAAA--
droPer2 scaffold_4:474976-475235 - CACACACA--T------------------AGAAGTGCG------------GTGCGCCTTATCAATGAACCGAGT-------------------CGCAGCCTGAGACCTAGCG-CCCTGGACCGAAAGG-----CACGCCACCGAAGTGAATTTGTT-------------------CGCAAG--AACGG-AAAAAAATGGCGCCCG---CAGCCACAGAAGCAAACCCAAACCCAAAAGCAAAAGCA--ACTTGACTTTCTTTTCGGTC--T--ATAG---------------TTCGTCGCCGTACTCGT-CTCGTCTCGTCGTCGACGA-CGAAT--------------------TTTCGTCGCAGT-GCGAT-----CC-CAAGTG----------------------------------------------AAAAA--
droWil2 scf2_1100000004513:1914987-1915118 - TATGTAC------------------AATTGAAAGTGCG------------A--CCCGTTATCAATGGATTT---------CGGAGTGG-GAGTCGGAGCCTGAC-----GTC-TGA------C-----GCTGCT------GCGAAGTGAATTTTTTT--TTCA---T------ACCGAGGGAAAAAGA-AAAAAAATGGCGCCCG---CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:17659736-17659936 - CA-----------------ATTCA------AAA-----------------GTGCG-CTTATCAATGAATTGAATTGAATTTGAGGCAG-CAGCAGCAGCAAGAA-----GCA-CGC------C-----AGCGCC-----AACGAAGTGAATTTTT--------------------CGAGGG--AACGG-AAAAAAATGGCGCCCGCCTCAGCCACAGA------------------------AGCA--AGTTGACTTTCTTTTCGGTG--TGTGTAG---------------TTCGTCGCCGCA-----------CTCGTCG--------------------------CT--CGTTTTCGTCGCA-------TAT--TT-------------------------------------------------------------
droMoj3 scaffold_6496:11284158-11284371 - AATTCA------------------------AAA-----------------GTGCG-CTTATCAATGAATTGAATTGAATTTGAGGCAG-CAGCAGCAGCAAGAA-----GCA-CGC------C-----AACGCC-----AACGAAGTGAATTTTT--------------------CGAGGG--AACGG-AAAAAAATGGCGCCCGCCTCAGCCACAGA------------------------AGCA--AGTTGACTTTCTTTTCGGTG--TGTGTAG---------------TTCGTCGCCGTA-----------CTCGTTG--------------------------TT--CGTTTTCGTCGCA-------TAT--TTG-TCG-CG-----------------------------------------A--TCAAAAA--
droGri2 scaffold_15245:14023237-14023461 + GACAGACA----------AATGCT------AAA-----------------GTGCG-CTTATCAATGAATCGAAT-----TTGAGGCAAAAAGCAGCAGCAAGAA-----GCA-CGC------C-----AACGCC-----AACGAAGTGAATTTTT--------------------CGAGGG--AACGG-AAAAAAATGGCGCCCGCCTCAGCCACAGA------------------------AGCA--AGTTGACTTTCTTTTCGGTG--TGTGTAG---------------TTCGTCGCCGCA-----------CTCGTCG--------------------------CT--CGTTTTCGTCGCAT-------AT--TTG-TCG-CG------------------------ATA---------AAAT-A--AAAAAAA--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGCCCAGGCGACAC-CAAAACGCAAAACGGAGA-----------------GTGTGTGTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAATTTTTTTCGTTGA---G------ACCGAGGG---ACGGAAAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTCC-TATATAGTTAGTAGT-----TGCTT------------GCCCCCGTCTCGTCGTCGGCGAGCGAATTCGGTGATTTTATTT--CGATTTCGTCGCAGT-GCGATAT--CCC-CAA-CG-----------------------------------------A--AGAAAAC--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................CCCGTCTCGTCGTCGGCGAGC.............................................................................................................2114.00431000000000000000
........................................................................................................................................................TTTTTCGTTGA---G------ACCGAGGG---A...............................................................................................................................................................................................................................................................2113.00312000000000000000
....................................................................................................................................................................................................................................................................................................CTT------------GCCCCCGTCTCGTCGTCG...................................................................................................................2113.00300000000000003000
.................................................................................................................................................................................................................AGCCAG---------------------------AGCA--ACTTGACTT.......................................................................................................................................................................................1912.00200000000000002000
...................................................................................................................................................GAATTTTTTTCGTTGA---G------ACCGAGG....................................................................................................................................................................................................................................................................2412.00200200000000000000
...................................................................................................................................................................................................................................................................................................GCTT------------GCCCCCGTCTCGTCGTC....................................................................................................................2112.00200001000000010000
...................................................................................................................................................................................................................................................GCA--ACTTGACTTTCTTTTCGG..............................................................................................................................................................................2112.00200000000200000000
..............................................................................................................................................................GTTGA---G------ACCGAGGG---ACGGAAA.........................................................................................................................................................................................................................................................2112.00200001000000001000
..............................................................................................................................................................GTTGA---G------ACCGAGGG---ACGGA...........................................................................................................................................................................................................................................................1912.00200200000000000000
........................................................................................................................................................................................................................................................................................................................................AGCGAATTCGGTGATTTTATA...........................................................................................2112.00200000000200000000
....................................................................................................................................................................................................................................................................................................CTT------------GCCCCCGTCTCGTCGTT....................................................................................................................2011.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................TTCGGTGATTTTATTT--CGATTTCGTC..............................................................................2611.00101000000000000000
..............................................................................................................................................................................................................................................................CTTTCTTTTCGGTCC-TATA......................................................................................................................................................................1911.00110000000000000000
....................................................................................................................................................................................................................................................................................................CTT------------GCCCCCGTCTCGTCGTCGTAA................................................................................................................2411.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................TATTT--CGATTTCGTCGCAGT-........................................................................2011.00100001000000000000
........................................................................................................................................................................................................................................................................................................................................................................TCGCAGT-GCGATAT--CCC-CAA-CG-----------------------------------------A--AGA......2611.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................GATTTCGTCGCAGT-GCGATAT--...............................................................2111.00100000000001000000
.....................GCAAAACGGAGA-----------------GTGTGT................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
.....................................................................................................................................C---------AAGTGAATTTTTTTCGTTGA---G------ACCGA......................................................................................................................................................................................................................................................................2711.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................CGAATTCGGTGATTTTATTT--CGATTT..................................................................................2611.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATTT--CGATTTCGTCGCAGT-GT......................................................................2111.00100000000000001000
..........................ACGGAGA-----------------GTGTGTGTTATC..........................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
......................................................................................................................................................TTTTTTTCGTTGA---G------ACCGAGG....................................................................................................................................................................................................................................................................2111.00100000000000001000
.....................................................................................................................................................................................................................................................................................................TT------------GCCCCCGTCTCGTCGTCG...................................................................................................................2011.00100000000000001000
....................................................................................................................................................................................................................................................CA--ACTTGACTTTCTTTTCGG..............................................................................................................................................................................2011.00100000000000001000
............................................................................................................................................................................................................................................................................................T-----TGCTT------------GCCCCCGTCTCGTC.......................................................................................................................2011.00100001000000000000
...........................................................................................................................................................................................................................................................................CC-TATATAGTTAGTAGT-----TGCT..................................................................................................................................................2111.00100000000010000000
..................AACGCAAAACGGAGA-----------------GTGTGT................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
........................................................................................................................................................................................................................................................................................................................CGTCTCGTCGTCGGCGAGCG............................................................................................................2011.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................CGAGCGAATTCGGTGATTTTT.............................................................................................2111.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................TATTT--CGATTTCGTCGCAGT-G.......................................................................2111.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................TTATTT--CGATTTCGTCGCAGT-GCGATA..................................................................2711.00100000010000000000
...............................................................................................................................................................TTGA---G------ACCGAGGG---ACGGAAAA........................................................................................................................................................................................................................................................2111.00100000000000001000
.........................................................................................................................................................................................................................................................CTTGACTTTCTTTTCGGT.............................................................................................................................................................................1811.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................ATTTTATTT--CGATTTCGTCGC............................................................................2111.00100000000001000000
............................................................................................................................................................TCGTTGA---G------ACCGAGGG---ACGGA...........................................................................................................................................................................................................................................................2111.00100000000000001000
.......................................................................................................................................................TTTTTTCGTTGA---G------ACCGAGGG---T...............................................................................................................................................................................................................................................................2211.00110000000000000000
.......................AAAACGGAGA-----------------GTGTGTGTTAT...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
........................AAACGGAGA-----------------GTGTGTGTTT............................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
....................................................................................................................................................................................................................................................................................................................CCCCCGTCTCGTCGTCGGC.................................................................................................................1911.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGATTTTATTT--CGATTTCGTC..............................................................................2111.00100001000000000000
........................................................................................................................................................................................................................................................................................................................................................TTATTT--CGATTTCGTCGCA...........................................................................1911.00100001000000000000
....................CGCAAAACGGAGA-----------------GTGTGTG...............................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
....................................................................................................................................................................................................................................................................................................................CCCCCGTCTCGTCGTCGGCGA...............................................................................................................2111.00110000000000000000
.......................................................TGTTATCAATGGAGTGTGT-----------------------------------GT-T.......................................................................................................................................................................................................................................................................................................................................2211.00100000001000000000
..............................AGA-----------------GTGTGTGTTATCAATGGA....................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................TATTT--CGATTTCGTCGCAGT-GCGATA..................................................................2611.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................TTATTT--CGATTTCGTCGCAGT-........................................................................2111.00100000000100000000
....................................................................................................................................................AATTTTTTTCGTTGA---G------ACCGTT.....................................................................................................................................................................................................................................................................2211.00100000000000001000
......................................................................................................................................................................................................................G---------------------------AGCA--ACTTGACTTTCTTTTCGGTCC-T.........................................................................................................................................................................2711.00100100000000000000
........................................................GTTATCAATGGAGTGTGT-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
...................................................................................................................................................GAATTTTTTTCGTTGA---G------ACC........................................................................................................................................................................................................................................................................2011.00100000000000001000
................AAAACGCAAAACGGAGA-----------------GTG...................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
........................................................................................................................................................TTTTTCGTTGA---G------ACCGAGGG---T...............................................................................................................................................................................................................................................................2111.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................GCGAGCGAATTCGGTGATTTT..............................................................................................2111.00100000000000001000
..........................................................................................................................................................................................................CCG---CAGCCAG---------------------------AGCA--ACTTGACT........................................................................................................................................................................................2211.00100000000000100000
..................................................................................................................................................TGAATTTTTTTCGTTGA---G------ACCGAGGG---A...............................................................................................................................................................................................................................................................2711.00100000001000000000
.............................GAGA-----------------GTGTGTGTTATCAATGGAGT..................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...................................................................................................................................................................................................ATGGCGCCCG---CAGCCAG---------------------------AGC...................................................................................................................................................................................................2011.00100001000000000000
..................................................................................................................................................................................................................................................................................................................................................GTGATTTTATTT--CGATTTCGT...............................................................................2111.00100000000000001000
..................................................................................................................................................TGAATTTTTTTCGTTGA---G------ACC........................................................................................................................................................................................................................................................................2111.00110000000000000000
...........................CGGAGA-----------------GTGTGTGTTATCAAT.......................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.....................................................................................................................................................................................................................................................A--ACTTGACTTTCTTTTCGGT.............................................................................................................................................................................2011.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................AGCGAATTCGGTGATTTTATT...........................................................................................2111.00100000000000001000
...................................................................................................................................................GAATTTTTTTCGTTGA---G------ACCGT......................................................................................................................................................................................................................................................................2211.00100000000000001000
droSec2
CGCCCAGGCGACAC-CAAAACGCAAAACGGAGA-----------------GTGTGTGTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAATTTTTTTCGTTGA---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTCC-TATATAGTTAGTAGT-----TGCTT------------GCCCCCGTCTCGTCGTCGGCGAGCGAATTCGGTGATTTTATTT--CGATTTCGTCGCAGT-GCGATAT--CCC-CAA-CG-----------------------------------------A--AGAAAAC--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................CTT------------GCCCCCGTCTCGTCGTCGGC.................................................................................................................2312.0020002
................AAAACGCAAAACGGAGA-----------------GTGT..................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.....................................................TGTGTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................2111.0010010
........................AAACGGAGA-----------------GTGTGTGTTATC..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.................................................................................................................................................................................................................................................................................................................................................................................CGATAT--CCC-CAA-CG-----------------------------------------A--AGT......1811.0010001
.........................................................................................................................................................TTTTCGTTGA---G------ACCGAGGG---ACG.............................................................................................................................................................................................................................................................2211.0010010
.............................................................................................................................................................................................................................................................................................................................................ATTCGGTGATTTTATTT--CGAT....................................................................................2111.0011000
..........................................................................................................................................................................................................................................................................................................................................................ATTT--CGATTTCGTCGCAGT-GC......................................................................2111.0010100
..................................................GTGTGTGTTATCAATGGAGTG.................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..............................................................................................................................................................GTTGA---G------ACCGAGGG---ACGG-AAA........................................................................................................................................................................................................................................................2111.0010010
.....................................................................................................................................................................................................................................................................................................................CCCCGTCTCGTCGTCGGCG................................................................................................................1911.0010010
..................................................GTGTGTGTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................2411.0010100
...............................................................................................................................................................................................................................................................TTTCTTTTCGGTCC-TATATAGTTAGTA.............................................................................................................................................................2711.0010010
.........................................................................T-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAA..................................................................................................................................................................................................................................................................................................2111.0010001
......................................................GTGTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................2011.0010100
..............................................................................................................................................................GTTGA---G------ACCGAGGG---ACGG-AA.........................................................................................................................................................................................................................................................2011.0010010
.....................................................TGTGTTATCAATGGAGTG.................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
........................................................GTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................1811.0010010
...................ACGCAAAACGGAGA-----------------GTGTGTG...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.............................................................................................................................................................CGTTGA---G------ACCGAGGG---ACGG-A..........................................................................................................................................................................................................................................................2011.0010100
..................................................GTGTGTGTTATCAATGGAGTGTAA-----------------------------------...........................................................................................................................................................................................................................................................................................................................................2411.0010100
.......................................................TGTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................1911.0010010
...........................................................................................................................................................................................................................................................................CC-TATATAGTTAGTAGT-----TGCTA------------.....................................................................................................................................2211.0010100
.................................................................................................................................................................................................................................................................................................................................GTCGGCGAGCGAATTCGGTG...................................................................................................2011.0011000
.......................................................TGTTATCAATGGAGTGTGT-----------------------------------GT-........................................................................................................................................................................................................................................................................................................................................2111.0010010
dm3
CGCCAAGGCGACAC-CTAAACGCAAAACGGAGA-----------------GTGTGTGTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAATTTTTTTCGTTGA---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTCC-TATATAGTTAGTAGT-----TGCTT------------GCCCCCGTCTCGTCGTCGGCGAGCGAATTCGGTGATTTTATTT--CGATTTCGTCGCAGT-GCGATAT--CCC-CAA-CG-----------------------------------------A--AGAAAAC--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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...................................................TGTGTGTTATCAATGGAGTG.................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GCCCCCGTCTCGTCGTCGGCGA...............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TT--CGATTTCGTCGCAGT-GC......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................................................................TAGTAGT-----TGCTT------------GCCCCCGTCTCGTC.......................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................GAGA-----------------GTGTGTGTTATCAATGGAGTGTG...............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TGA---G------ACCGAGGG---ACGG-AA.........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AATGGAGTGTGT-----------------------------------GT-TCCC------C-----C.......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............................................................ATGGAGTGTGT-----------------------------------GT-TCCC------C-----AAA.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTCGTCGCAGT-GCGATAT--CCC-CAA-C......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................G------ACCGAGGG---ACGG-AAAAAAATGGCG...............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CGG-AAAAAAATGGCGCCCG---CA......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACGGAGA-----------------GTGTGTGTTATCAATGG.....................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TTATCAATGGAGTGTGT-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----A.......................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................AACGGAGA-----------------GTGTGTGTTATCAATGGAG...................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TTTCTTTTCGGTCC-TATAT.....................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GT-GCGATAT--CCC-CAA-CG-----------------------------------------A--AG.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GGCGAGCGAATTCGGTGATTT...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCAAAACGGAGA-----------------GTGTGTGTTATCA.........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTTTTCGGTCC-TATATAGTTA................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GTGTGTTATCAATGGAGTGTGT-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ATCAATGGAGTGTGT-----------------------------------GT-TCC.....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................GA-----------------GTGTGTGTTATCAATGGAGT..................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGACAC-CTAAACGCAAAACGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GCAGT-GCGATAT--CCC-CAA-CG-----------------------------------------A--AGA......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TAGTAGT-----TGCTT------------GCCCCCGTCTCG.........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................CCCG---CAGCCAG---------------------------AGCA--ACTTGA..........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.....................GCAAAACGGAGA-----------------GTGTGT................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................AACGCAAAACGGAGA-----------------GTG...................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CGTCGGCGAGCGAATTCGGTGTA.................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................TTCGTTGA---G------ACCGAGGG---ACGG-T..........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................CCGAGGG---ACGG-AAAAAAATGGCGCC.............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GCC---------AAGTGAATTTTTTTCGTTG......................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................A--ACTTGACTTTCTTTTCGGT.............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GGTCC-TATATAGTTAGTAGT-----......................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TTATTT--CGATTTCGTCGCAGT-........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AATTCGGTGATTTTATTT--CGAT....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CGTCGTCGGCGAGCGAATTC.......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................T--CGATTTCGTCGCAGT-GCGATA..................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................................................................TGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGC...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TTT--CGATTTCGTCGCAGT-GC......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................CGCAAAACGGAGA-----------------GTGTGTGTT.............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TT--CGATTTCGTCGCAGT-G.......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................TTGACTTTCTTTTCGGTCC-T.........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TTCGGTGATTTTATTT--CGATT...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------A........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TATAGTTAGTAGT-----TGCTT------------GCC..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTTATTT--CGATTTCGTCGCAGT-G.......................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TTATTT--CGATTTCGTCGCAGT-G.......................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CC---------AAGTGAATTTTTTTCGTTG......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........CGACAC-CTAAACGCAAAACG...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................ATTTTTTTCGTTGA---G------ACCGAGA....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................AGA-----------------GTGTGTGTTATCAATG......................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.....................................................................................................................................................................................................................................................................................TTAGTAGT-----TGCTT------------GCCCCC...............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TATATAGTTAGTAGT-----TGC...................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................AGA-----------------GTGTGTGTTATCAATGGAGTGTG...............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................TCGTCGTCGGCGAGCGAATTCG......................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AACGCAAAACGGAGA-----------------GTGT..................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GA---G------ACCGAGGG---ACGG-AAAAAA.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TATTT--CGATTTCGTCGCAGT-GCGATAT--C..............................................................2811.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------.........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................AGGG---ACGG-AAAAAAATGGCG...............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CGATAT--CCC-CAA-CG-----------------------------------------A--AGAAAAC--2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................TGTTATCAATGGAGTGTGT-----------------------------------A..........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AGGG---ACGG-AAAAAAATGG.................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................TGAATTTTTTTCGTTGA---G------ACC........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AG---------------------------AGCA--ACTTGACTTTCTTTTCGGTCC-..........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTTTTCGGTCC-TATATAGTTAG...............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CGTCTCGTCGTCGGCGAGCGAATTCGGT....................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................T-TCCC------C-----AACGCC---------AAGTGAATT................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TTTCGTTGA---G------ACCGAGG....................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GAATTTTTTTCGTTGA---G------ACCG.......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TTGACTTTCTTTTCGGTCC-..........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGTGTGTTATCAATGGAGTGTGT-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................TGTGTTATCAATGGAGTGTGT-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TTGACTTTCTTTTCGGTCC-TATAT.....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACG....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AC-CTAAACGCAAAACGGAGA-----------------GT....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CGG-AAAAAAATGGCGCCCG---CAGCC...................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTCGTTGA---G------ACCGAGGG---ACGG-C..........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................CCG---CAGCCAG---------------------------AGCA--ACTG............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GTTGA---G------ACCGAGGG---ACGG-AA.........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................TTTTTTCGTTGA---G------ACCGAGGG---ACGG-AAA........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AAAACGGAGA-----------------GTGTGTGTTATCA.........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ACTTTCTTTTCGGTCC-TATAT.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAC-CTAAACGCAAAACGGAGA-----------------G.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................CGTTGA---G------ACCGAGGG---ACGG-A..........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GCTT------------GCCCCCGTCTCGTCGTC....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTTTTCGGTCC-TATATAGT..................................................................................................................................................................1911.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................G---ACGG-AAAAAAATGGCGCCCG---CAG.....................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TGA---G------ACCGAGGG---ACGG-AAAAAAATGGC................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AGT-GCGATAT--CCC-CAA-CG-----------------------------------------A--AG.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................CCCG---CAGCCAG---------------------------AGCA--ACTT............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGCCCAGGCGACACGCAAAACGCAAAA-------------------CCGAGTGTGTGTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAATTTTTTTCGTTGA---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----ACAAGT-----TGTTC------------GCCCCCATCTCGTCGTCGGCGAGCGAATGCGGTGATTTTATTT--CGATTTCGTCGCAGT-GCGATAT--ATCACAA--G-----------------------------------------A--A-GAAAC--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................ATTTTTTTCGTTGA---G------ACCGAGGG---................................................................................................................................................................................................................................................................2318.0080000008
..................................................................................................................................................TGAATTTTTTTCGTTGA---G------ACCGAGG....................................................................................................................................................................................................................................................................2516.0060000006
.............................................................................................................................................................................................................................................................................................................................CGTCGTCGGCGAGCGAATGCGGT....................................................................................................2315.0050000005
............................................................................................................................................................................................................................................................................................................................TCGTCGTCGGCGAGCGAATGCGGTGATT................................................................................................2814.0040000004
........................................................................................................................................................TTTTTCGTTGA---G------ACCGAGGG---ACGG-AAA........................................................................................................................................................................................................................................................2713.0030000003
........................................................GTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................1812.0020001010
........................................................GTTATCAATGGAGTGTGT-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................1912.0021000100
........................................................GTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----........................................................................................................................................................................................................................................................................................................................2511.0010000100
..................AACGCAAAA-------------------CCGAGTGTGT................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
......................................................GTGTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................2011.0010001000
..............GCAAAACGCAAAA-------------------CCGAGTG...................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.................................................................................................................................................................................................AAATGGCGCCCG---CAGCCAG---------------------------AGCA--AC..............................................................................................................................................................................................2511.0010100000
......................................................GTGTTATCAATGGAGTGTGT-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................2111.0010000100
......................................................................................................................................................................G------ACCGAGGG---ACGG-AAAAAAATGGC................................................................................................................................................................................................................................................2411.0010000100
................................................................................................................................................................................................................................................................................................................................................CGGTGATTTTATTT--CGATTTC.................................................................................2111.0011000000
...........................................................................................................................................................................................................................................................................C--TATAT----ACAAGT-----TGTTC------------GC...................................................................................................................................1911.0010001000
....................................................GTGTGTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................2211.0010000100
.................................................................................................................................................................GA---G------ACCGAGGG---ACGG-AAAAA......................................................................................................................................................................................................................................................2011.0010000100
...................................................TGTGTGTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................2311.0010000100
.................AAACGCAAAA-------------------CCGAGTGTGT................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.........GACACGCAAAACGCAAAA-------------------CCGAGT....................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
................................................................................................................................................................................................................................................................................................................................CGTCGGCGAGCGAATGCGGTG...................................................................................................2111.0010001000
droYak3
CGCCCAGGCGACACGCAAAACGCAAAA-------------------CCGAGTGTGTGTTATCAATGGAGTGTGT-----------------------------------GT-TCCC------C-----AACGCC---------AAGTGAATTTTTTTCGTTGA---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----ACAAGT-----TGTTC------------GCCCCCGTCTCGTCGTCGGCGAGCGAATGCGGTGATTTTAATT--CGATTTCGTCGCAGT-GCGATATATCCC-CAA--G-----------------------------------------A--A-GAAAC--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................GTTATCAATGGAGTGTGT-----------------------------------GT-........................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................G-AAAAAAATGGCGCCCG---CA......................................................................................................................................................................................................................................1911.00101000000000
..............................................................................................................................................................GTTGA---G------ACCGAGGG---ACGG-AAAAAAAT...................................................................................................................................................................................................................................................2611.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................ATTTTAATT--CGATTTCGTCGCAGT-GCG.....................................................................2711.00110000000000
...........................................................................................................................................................................................................................................................................................................................CTCGTCGTCGGCGAGCGAATGCGGTG...................................................................................................2611.00100000010000
........................................................GTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................1811.00100010000000
......................................................GTGTTATCAATGGAGTGTGT-----------------------------------...........................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..................................................................................................................................................................................................................GCCAG---------------------------AGCA--ACTTGACTTTCTTTT.................................................................................................................................................................................2411.00100100000000
........................AAA-------------------CCGAGTGTGTGTTATCAATG......................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..............................................................................................................................................................GTTGA---G------ACCGAGGG---ACGG-AAA........................................................................................................................................................................................................................................................2111.00100000010000
.......................................................................................................................................................................................................................................................................................................................CCGTCTCGTCGTCGGCGAGC.............................................................................................................2011.00101000000000
.................................................................................................................................................GTGAATTTTTTTCGTTGA---G------AC.........................................................................................................................................................................................................................................................................2111.00110000000000
..............................................................................................................................................................................................................................................................CTTTCTTTTCGGTC--TATAT----A................................................................................................................................................................2011.00101000000000
.........................................................................................................................................................................................................................................................................................................................GTCTCGTCGTCGGCGAGCGAATG........................................................................................................2311.00101000000000
...............................................................................................................................................................................................................................................................TTTCTTTTCGGTC--TATAT----ACAAGT-----TG....................................................................................................................................................2611.00101000000000
..............GCAAAACGCAAAA-------------------CCGAGTGTGTGT..............................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
........................................................GTTATCAATGGAGTGTGT-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................1911.00100000010000
droEug1
CGCCCACACGTCGC-CAAACAGCCAAATC-------------AAACCCGAG--AATGTTATCAATGAAGC---------------------------------------GT-TCCC------CA-ACGAACGCC---------AAGTGAATTTTTTTA---GA---C------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----A---GT-----AGTTC------------GCCCCCGTCTCGTCGTCGGCGAACGAATGCGGTGATTTT--TT--CGATTTCGTCGCAGT-GCGATAT--ACC-TAA-AAT--------------------------------------ATA--AAAAAGG--SizeHit CountTotal NormTotal
No Reads
droBia1
CGCCCACACGTCGC-CAGAA-------------GTCCGCAAAAA--CCGCG--AGTGTTATCAATGGAGTGCTT------------------------------------TG-CCC------CA----AACGCC---------AATTGAATTTTTTTA---GA---GACCGT-GCCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAGAGC------------------------AGCA--ACTTGACTTTCTTTTCGGTC--CACAT----A---GT-----AGTTC------------GCCCCCGTCTCGTCGTCGGCGAACGAATGCGGTGATTTTCTGT--CGATTTCGTCGCAGT-GCGATAT--CCC-TA------------------------------------------------AGAAAAC--SizeHit CountTotal NormTotal
No Reads
droTak1
CCCGCAAACGTCGC-AA-AAGCCAAA----------------AACCCCGAG--AGTGTTATCAATGAAGTGTGT------------------------------------TG-CCC------CA----AACGCC---------AAGTGAATTTTTTTA---GA---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----A---GT-----AGTTC------------GCCCCCGTCTCGTCGTCGGCGAACGAATGCGGTGATTTT--TT--CGACTTCGTCGCAGT-GCGATAT--CCC-C---CC-----------------------------------------A--AAAAAAT--SizeHit CountTotal NormTotal
No Reads
droEle1
CGCCCAC--GTCGC-CA--------AA-------------------CCGAG--TGTGTTATCAATGAAGTA--------------------------------------GTG-CCC------CA-AC-AACGCC---------AACTACATTTTTT-A---GC---G------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----A---GT-----AGTTC------------GCCCCCGTCTCGTTG-CGGCGAACGAATGCGGTGATTTTCGTCGTGGTTTTCGTCGCAGT-GCGATAG--CCC-CCA--------------------------------------------A--AAAAGAT--SizeHit CountTotal NormTotal
No Reads
droRho1
CGCCCAC--GTCGC-CAAAA---------------------------CGAG--TGTGTTATCAATGAAGTA--------------------------------------GTG-CCC------CA-AC-AACGCC---------AAGTAAATTTTTTTA---GA---C------ACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----A---GT-----AGTTC------------GCCCCCGTCTCGTTG-CGGCGAACGAATGCGGTGATTTTCGTCGTGGTTTTCGTCGCAGTTCCGATAG--CCC-CAA-C------------------------------------------A--A-AAAAA--SizeHit CountTotal NormTotal
No Reads
droFic1
CGCCCACACGTCGC-AAGAA---AAAA-------------------CGGAG--AGTGTTATCAATGGAGTGCCA-----------------------------------GTG-CCC------C-----AACGCC---------AAGTGATTTTTTTTAA--GAGAAGACCGAGACCGAGGG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCA--ACTTGACTTTCTTTTCGGTC--TATAT----A---GT-----AGTTC------------GCCCCCGTCTCGTCGTCGGCGAACGAATGCGGTGATTT----T--CGTTTTCGTCGCAGT-GCGATAG--CCC-AAA-AGG--------------------------------------AAA--AATAAAC--SizeHit CountTotal NormTotal
No Reads
droKik1
CGCCCCCC-GAGGC-CACC------AC-------------------CCGAG--AGTGTTATCAGTGGAGCGAAC-------AC--------------------G-----GCG-CTC------CA----AACGCC---------AA-----------------------------------------AG-AAAAAAATGGCGCCCG---CAGCAGCGGA------------------------CTCT--GGCTGACTTTCTTTTCGTTCGGAATAT----A---GTCGTTCAGTTC------------GCCCCAGTCTCGTCGTCGGCGGACGAATGCGGTGATTTTCGTTAGCGTTTTCGTCGCAGT-GCGATC----CC-C-T-CG-----------------------------------------A----AACAC--SizeHit CountTotal NormTotal
No Reads
droAna3
AAT--------------------------------------------CGAGTGTGTGTTATCAATGGATAA---------GGC--------------------A-----GCA-CGC------CA----AACGCCAGGCCA-AAAACTGAATTTTTCTCAC----------------TAGCG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCAAAACTTGACTTTCTTTTCGGTG--T--ATAGTTCG--GT-----CGTCT------------CGCCAAGTCTCGTCGTTGCCGCAGCAGTGC-GCGATCCC--------------------------------CC-CCA--G-AAAAGTGTATTTAGAACATCGCAGTGGCATCATCGAACC-AA-CAAAAAT--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................GC--------------------A-----GCA-CGC------CA----AACGCCAGGCCA-...........................................................................................................................................................................................................................................................................................................2314.004000004
..................................................................................C--------------------A-----GCA-CGC------CA----AACGCCAGGCCA-AAAACT.....................................................................................................................................................................................................................................................................................................2811.001100000
..................................................................................................................................................................................................................................................................................................CGTCT------------CGCCAAGTCTCGTCGTTGC..................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGTGGCATCATCGAAC..............2011.001010000
............................................................TCAATGGATAA---------GGC--------------------A-----GCA-CGC------..............................................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................ACGG-AAAAAAATGGCGCCCG---C.......................................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................TCGTCGTTGCCGCAGCAGTGC-......................................................................................................2111.001000001
...........................................................................................................................................................................................................................................................................................GT-----CGTCT------------CGCCAAGTCTCGTC.......................................................................................................................2111.001100000
...........................................................ATCAATGGATAA---------GGC--------------------A-----GCA-C......................................................................................................................................................................................................................................................................................................................................2011.001010000
..........................................................................................................................................................................................GG-AAAAAAATGGCGCCCG---CAG.....................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................CGCCAAGTCTCGTCGTTGCCG................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................................AAAACTTGACTTTCTTTTCGGT.............................................................................................................................................................................2211.001010000
..........................................................................................................................................................................................................................................................................TG--T--ATAGTTCG--GT-----CGTCT------------C....................................................................................................................................1911.001100000
droBip1
AAC--------------------------------------------CGAGTGTGTGTTATCAATGGATAA---------GGC--------------------A-----GCA-CGC------C-----AACGCCAGGCCACAAAAGTGAATTTTTT-------------------CTAGCG---ACGG-AAAAAAATGGCGCCCG---CAGCCAG---------------------------AGCAAAACTTGACTTTCTTTTCGGTG--T--ATAG---------------TTCGTC-------TCGC-CAAGTCTCGTTG--------------------------------------CCGCAGT-GCGCGAT--CCC-CCC-AG-AAAAGTGTAT-TAGAACATCGCAGTGGC------GAAGC-AGAA-AAAACTGSizeHit CountTotal NormTotal
No Reads
dp5
CACACACA--T------------------AGAAGTGCG------------GTGCGCCTTATCAATGAACCGAGT-------------------CGCAGCCTGAGACCTAGCG-CCCTGGACCGAAAGG-----CACGCCACCGAAGTGAATTTGTT-------------------CGCAAG--AACGG-AAAAAAATGGCGCCCG---CAGCCACAGAAGCAAACCCAAACCCAAAAGCAAAAGCA--ACTTGACTTTCTTTTCGGTC--T--ATAG---------------TTCGTCGCCGTACTCGT-CTCGTCTCGTCGTCGACGA-CGAAT--------------------TTTCGTCGCAGT-GCGAT-----CC-CAAGTG----------------------------------------------AAAAA--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................TTTCGGTC--T--ATAG---------------TTCGTCGC............................................................................................................................................2112.0020100001000
.........................................................................................................................................................................................................................................................................................................CGCCGTACTCGT-CTCGTCTCG.........................................................................................................................2112.0020200000000
...............................................................................................................................................................................................................................................................TTTCTTTTCGGTC--T--ATAG---------------TTC.................................................................................................................................................2112.0020000000020
...................................................................................................................................................................................................................................................................................................................GT-CTCGTCTCGTCGTCGACGA-CGA...........................................................................................................2411.0010100000000
....................................................................CCGAGT-------------------CGCAGCCTGAGAC..............................................................................................................................................................................................................................................................................................................................................1911.0010001000000
...ACACA--T------------------AGAAGTGCG------------GTGCG.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................CGCCGTACTCGT-CTCGTCTCGTCGTCGAC.................................................................................................................2911.0010010000000
...........................................................................................................................................................................................................................................................TGACTTTCTTTTCGGTC--T--ATAG---------------TTCG................................................................................................................................................2611.0010000000010
...................................................................................................................................................................................................................................................................TTTTCGGTC--T--ATAG---------------TTCGTCG.............................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................GCA--ACTTGACTTTCTTTTCGG..............................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................CGGTC--T--ATAG---------------TTCGTCGCCGTA........................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................................................................................................CGCCGTACTCGT-CTCGTCTCGTC.......................................................................................................................2311.0010100000000
.....................................................................................................................................................................................................................................................A--ACTTGACTTTCTTTTCGGT.............................................................................................................................................................................2011.0010010000000
.............................................................................................................................................................................................................................................................................................................GTACTCGT-CTCGTCTCGTCGTCGACGA-CG............................................................................................................2911.0010010000000
.........................................................................................................................................................................................................................................................................................................................................................................CGCAGT-GCGAT-----CC-CAAGTG----------------------------------------------AA.....2111.0010000100000
........................................................CTTATCAATGAACCGAGT-------------------CGCAGCCTGA.................................................................................................................................................................................................................................................................................................................................................2811.0010000001000
......................................................................GAGT-------------------CGCAGCCTGAGACCTAGCG-.......................................................................................................................................................................................................................................................................................................................................2311.0010010000000
..............................................................................................................................................................................................................................................................................................................................................T--------------------TTTCGTCGCAGT-GCGAT-----CC-CAAGTG----------------------------------------------A......2711.0010100000000
droPer2
CACACACA--T------------------AGAAGTGCG------------GTGCGCCTTATCAATGAACCGAGT-------------------CGCAGCCTGAGACCTAGCG-CCCTGGACCGAAAGG-----CACGCCACCGAAGTGAATTTGTT-------------------CGCAAG--AACGG-AAAAAAATGGCGCCCG---CAGCCACAGAAGCAAACCCAAACCCAAAAGCAAAAGCA--ACTTGACTTTCTTTTCGGTC--T--ATAG---------------TTCGTCGCCGTACTCGT-CTCGTCTCGTCGTCGACGA-CGAAT--------------------TTTCGTCGCAGT-GCGAT-----CC-CAAGTG----------------------------------------------AAAAA--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................CTCGTCTCGTCGTCGACGA-CG............................................................................................................2121.503300000
.........................................................................................................................................................................................................................................................................GTC--T--ATAG---------------TTCGTCGCCG..........................................................................................................................................1811.001100000
.............................................................................................CGCAGCCTGAGACCTAGCG-CCCTGGAC...............................................................................................................................................................................................................................................................................................................................2711.001100000
.....................................................................CGAGT-------------------CGCAGCCTGAGACCTAGCG-CC.....................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................CGAGT-------------------CGCAGCCTGAGACCTAGCG-CCC....................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................................................................................................................CTTTTCGGTC--T--ATAG---------------TTCGTCGCC...........................................................................................................................................2411.001100000
.........................................................................................................................................................................................................................................................................................................CGCCGTACTCGT-CTCGTCTCGTCGTC....................................................................................................................2621.002200000
...................................................................................................................................................................................................................................................................................................................GT-CTCGTCTCGTCGTCGAC.................................................................................................................1920.501010000
...............................................................................................................................................................................................................................................................................................................ACTCGT-CTCGTCTCGTCGTCGAC.................................................................................................................2320.501100000
........................................................CTTATCAATGAACCGAGT-------------------CGCA.......................................................................................................................................................................................................................................................................................................................................................2220.501010000
.........................................................................................................................................................................................................................................................................................................CGCCGTACTCGT-CTCGTC............................................................................................................................1820.501100000
...................................................................................................................CTGGACCGAAAGG-----CACGCCACCGAAGT.....................................................................................................................................................................................................................................................................................................2720.501010000
..................................................................................................................CCTGGACCGAAAGG-----CACGCCACCGAAGT.....................................................................................................................................................................................................................................................................................................2820.501100000
droWil2
TATGTAC------------------AATTGAAAGTGCG------------A--CCCGTTATCAATGGATTT---------CGGAGTGG-GAGTCGGAGCCTGAC-----GTC-TGA------C-----GCTGCT------GCGAAGTGAATTTTTTT--TTCA---T------ACCGAGGGAAAAAGA-AAAAAAATGGCGCCCG---CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................TTT---------CGGAGTGG-GAGTCGGAGCC....................................................................................................................................................................................................................................................................................................................................................2211.00110000
.................................................................................................................................CTGCT------GCGAAGTGAATTTT..............................................................................................................................................................................................................................................................................................1911.00100010
..................................................................................................................................................................A---T------ACCGAGGGAAAAAGA-A..........................................................................................................................................................................................................................................................1811.00100001
.....................................................................................................................................................ATTTTTTT--TTCA---T------ACCGAGGG...................................................................................................................................................................................................................................................................2111.00100010
..............................................................................................................TC-TGA------C-----GCTGCT------GCGAAGTGA...................................................................................................................................................................................................................................................................................................2111.00101000
..........................................................TATCAATGGATTT---------CGGAGTGG-GAGTC..........................................................................................................................................................................................................................................................................................................................................................2611.00100100
..................................................A--CCCGTTATCAATGGATTT---------CG......................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.....................................................................................................GAC-----GTC-TGA------C-----GCTGCT------GCGAA.......................................................................................................................................................................................................................................................................................................2111.00101000
...............................................................ATGGATTT---------CGGAGTGG-GAGTC..........................................................................................................................................................................................................................................................................................................................................................2111.00100100
.................................................................................................................TGA------C-----GCTGCT------GCGAAGTGA...................................................................................................................................................................................................................................................................................................1911.00100010
...............................................................ATGGATTT---------CGGAGTGG-GAGTCGGAGC.....................................................................................................................................................................................................................................................................................................................................................2611.00101000
...............................................................................................GAGCCTGAC-----GTC-TGA------C-----GCTGC...................................................................................................................................................................................................................................................................................................................2111.00100100
......................................................................................................................................................TTTTTTT--TTCA---T------ACCGAGGGA..................................................................................................................................................................................................................................................................2111.00100010
...............................AAGTGCG------------A--CCCGTTATCAATG......................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
............................................................TCAATGGATTT---------CGGAGTGG-G..............................................................................................................................................................................................................................................................................................................................................................2011.00101000
.............................................................CAATGGATTT---------CGGAGTGG-GAGTCGG........................................................................................................................................................................................................................................................................................................................................................2511.00101000
.................................................................GGATTT---------CGGAGTGG-GAGTC..........................................................................................................................................................................................................................................................................................................................................................1911.00100100
.....................................................................................................GAC-----GTC-TGA------C-----GCTGCT------GCGAAG......................................................................................................................................................................................................................................................................................................2211.00100010
droVir3
CA-----------------ATTCA------AAA-----------------GTGCG-CTTATCAATGAATTGAATTGAATTTGAGGCAG-CAGCAGCAGCAAGAA-----GCA-CGC------C-----AGCGCC-----AACGAAGTGAATTTTT--------------------CGAGGG--AACGG-AAAAAAATGGCGCCCGCCTCAGCCACAGA------------------------AGCA--AGTTGACTTTCTTTTCGGTG--TGTGTAG---------------TTCGTCGCCGCA-----------CTCGTCG--------------------------CT--CGTTTTCGTCGCA-------TAT--TT-------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................TTCA------AAA-----------------GTGCG-CTTATCAAT.......................................................................................................................................................................................................................................................................................................................................................................................2113.003000000000000000000000000000010000000000200000000000000000000000
....................................................................................................................................................................................................................................................................................................TTCGTCGCCGCA-----------CTCGTCG--------------------------CT--CGTTT...................................................................................2613.003000000000000000000000000000000000000000000000000000000000000003
....................................................................................................................................................................................................................................................................................................TTCGTCGCCGCA-----------CTCGTCG--------------------------............................................................................................1912.002000000000000000000000000000000000200000000000000000000000000000
....................................................................................................AGAA-----GCA-CGC------C-----AGCGCC-----AACG.........................................................................................................................................................................................................................................................................................................2112.002000001000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................AGCA--AGTTGACTTTCTTTTC................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
............................................................................AATTTGAGGCAG-CAGCAGCAG......................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................AATTGAATTTGAGGCAG-CAGCAGC........................................................................................................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................G--------------------------CT--CGTTTTCGTCGCA-------TAT--TT-------------------------------------------------------------2111.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................GAAGTGAATTTTT--------------------CGAGGG--AACGG-AA.........................................................................................................................................................................................................................................................2611.001000000000000010000000000000000000000000000000000000000000000000
.A-----------------ATTCA------AAA-----------------GTGCG-CTTATCA.........................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
......................................................................................................AA-----GCA-CGC------C-----AGCGCC-----AACGAA.......................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................AGTTGACTTTCTTTTCGGTG--T.........................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................GA------------------------AGCA--AGTTGACTTTCT....................................................................................................................................................................................1811.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CA--AGTTGACTTTCTTTTCGGTG--T.........................................................................................................................................................................2311.001000000000000000000000000000000000010000000000000000000000000000
................................................................TGAATTGAATTGAATTTGAGGCAG-C..............................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................GAATTTTT--------------------CGAGGG--AACGG-AA.........................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AGA------------------------AGCA--AGTTGACTT.......................................................................................................................................................................................1611.001000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................GTAG---------------TTCGTCGCCGCA-----------CTCGTCG--------------------------CT--C.......................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................ATTTTT--------------------CGAGGG--AACGG-A..........................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................A-----------CTCGTCG--------------------------CT--CGTTTTCGT...............................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
...........................................................................GAATTTGAGGCAG-CAGCAGC........................................................................................................................................................................................................................................................................................................................................................2011.001000000000001000000000000000000000000000000000000000000000000000
.............................................................................................................GCA-CGC------C-----AGCGCC-----AACGAAGT.....................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GTGAATTTTT--------------------CGAGGG--AACGG-A..........................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
.............................................................CAATGAATTGAATTGAATTTGAGGCA.................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
........................................................................................................................................................................................................................................................................GGTG--TGTGTAG---------------TTCGTCGCC...........................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCA--AGTTGACTTTCTTTTCGGTG--T.........................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGCA--AGTTGACTTTCTTTTCGGTG--TGT.......................................................................................................................................................................2711.001000000000000010000000000000000000000000000000000000000000000000
.............................................................................................AGCAGCAAGAA-----GCA-CGC------C-----AGC.....................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AAGTGAATTTTT--------------------CGAGGG--AAC..............................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................................CAGCAGCAGCAAGAA-----GCA-CGC------..............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
............................................................................................CAGCAGCAAGAA-----GCA-CGC------C-----AAA.....................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000000000000100000000000000000000000000
......................................................................................AG-CAGCAGCAGCAAGAA-----GCA-.......................................................................................................................................................................................................................................................................................................................................2030.331000000000000010000000000000000000000000000000000000000000000000
.....................................................................................CAG-CAGCAGCAGCAAGAA-----GCA-.......................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000100000000000000000000000000000000000000
droMoj3
AATTCA------------------------AAA-----------------GTGCG-CTTATCAATGAATTGAATTGAATTTGAGGCAG-CAGCAGCAGCAAGAA-----GCA-CGC------C-----AACGCC-----AACGAAGTGAATTTTT--------------------CGAGGG--AACGG-AAAAAAATGGCGCCCGCCTCAGCCACAGA------------------------AGCA--AGTTGACTTTCTTTTCGGTG--TGTGTAG---------------TTCGTCGCCGTA-----------CTCGTTG--------------------------TT--CGTTTTCGTCGCA-------TAT--TTG-TCG-CG-----------------------------------------A--TCAAAAA--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................AATGGCGCCCGCCTCAGCCAC.................................................................................................................................................................................................................................2112.002010010
.......................................................................................................................................................................................................................AGA------------------------AGCA--AGTTGACTTTCTT...................................................................................................................................................................................2011.001100000
....................................................................................................................................................................................................................................................................................................................................................................TTCGTCGCA-------TAT--TTG-TCG-C......................................................1911.001100000
............................................................................AATTTGAGGCAG-CAGCAGCAGCAAGAA-----...........................................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................TGAGGCAG-CAGCAGCAGCAAGA.................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................TTGAATTGAATTTGAGGCAG-C..............................................................................................................................................................................................................................................................................................................................................................2111.001000010
..........................................................................................AGCAGCAGCAAGAA-----GCA-CGC------C-----........................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................G-CAGCAGCAGCAAGAA-----GCA-CGC------..............................................................................................................................................................................................................................................................................................................................2211.001000010
.....................................................................................................................................................................................................................................................A--AGTTGACTTTCTTTTCGGTG--TGT.......................................................................................................................................................................2411.001000001
........................................................................................................................................................................................................................................................................................................TCGCCGTA-----------CTCGTTG--------------------------TT--CGTTT...................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................TG--TGTGTAG---------------TTCGTCGCCGTA-----------C............................................................................................................................2211.001100000
....................................................GCG-CTTATCAATGAATTGAATT.............................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................ACGG-AAAAAAATGGCGCCCGC..........................................................................................................................................................................................................................................2111.001100000
.ATTCA------------------------AAA-----------------GTGCG-CTTATCAATGAAT...................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...........................................................................GAATTTGAGGCAG-CAGCAGC........................................................................................................................................................................................................................................................................................................................................................2020.501000010
........................................................................ATTGAATTTGAGGCAG-CAGCA..........................................................................................................................................................................................................................................................................................................................................................2120.501100000
.....................................................................................CAG-CAGCAGCAGCAAGAA-----GCA-.......................................................................................................................................................................................................................................................................................................................................2130.331010000
droGri2
GACAGACA----------AATGCT------AAA-----------------GTGCG-CTTATCAATGAATCGAAT-----TTGAGGCAAAAAGCAGCAGCAAGAA-----GCA-CGC------C-----AACGCC-----AACGAAGTGAATTTTT--------------------CGAGGG--AACGG-AAAAAAATGGCGCCCGCCTCAGCCACAGA------------------------AGCA--AGTTGACTTTCTTTTCGGTG--TGTGTAG---------------TTCGTCGCCGCA-----------CTCGTCG--------------------------CT--CGTTTTCGTCGCAT-------AT--TTG-TCG-CG------------------------ATA---------AAAT-A--AAAAAAA--SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................AAT-----TTGAGGCAAAAAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................2111.00110

Generated: 05/18/2015 at 08:43 AM