ID:

dsi_15460

 Coordinate:

3l:17374882-17375031 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.6 -12.5 -12.4

Flybase annnotation

CDS [3l_17375032_17375274_-]; exon [3l_17375032_17375392_-]; intron [3l_17374470_17375031_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACCCCGAGTTCCGTAAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGGGTGAGTAGGATGGGGATTTCCCTGAACTGTGTTTTCCACATCTCGAAACGCAGCTGTAGTCAATTGTTGCTAAATGTGCATTACCTTTGCAGTAATACACCCATTAGCAGTAGCAGAATCATCTTACCAAGATACGTTTACAAAAAGTCACAAAGCTTTTTCTAGTGTTTTCTAGATTAATATTCTGTTAATATTCTGGA
**************************************************************************************.................((((.......(((((((((..(((.(((((.......))))).)))...))))))))))))).........*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR902009
testis
 M025
embryo
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
.............TAAGAAGCTGGACAAGGCGCC........................................................................................................................................................................................................................ 21 0 1 4.00 4 2 2 0 0 0 0 0 0
.........................................................................................................................................................TTAGCAGTAGCAGAATCATCTT........................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.............TAAGAAGCTGGACAAGGCGT......................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0
........TTCCGTAAGAAGCTGGACAAGGCGCC........................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 1 0 0
.............TAAGAAGCTGGACAAGGCGTTT....................................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0
............GTAAGAAGCTGGACAAGGCGCCCGAGGC.................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0
............GTAAGAAGCTGGACAAGG............................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0
...................GCTGGACAAGGCGCCCGAGGC.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0
............GTAAGAAGCTGGACAAGGC........................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0
......................................................................................CACATCTCGAAACGCAGCTGT............................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...........CGTAAGAAGCTGGACAAGGC........................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
............GTAAGAAGCTGGACAAGGCGCCCGTGG................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................CGAGGCCGACATTCGGGTGAGTAGGAT............................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0
............GTAAGAAGCTGGACAAGGCGCCCGA..................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0
..............AAGAAGCTGGACAAGGCGCCCGG..................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0
............GTAAGAAGCTGGACAAGGCGCCCGAGGCC................................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0
..............AAGAAGCTGGACAAGGCGCCCGAGGC.................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...........CGTAAGAAGCTGGACAAGGCGA......................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................TTTGCAAAAAGTCAGGAAGCTTT......................................... 23 3 1 1.00 1 0 0 0 0 1 0 0 0
......................GGTTAAGGCGCCCGATGCCGA............................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 1 0 0 0
............................GGCGCCCGATGCCGACGCTC.......................................................................................................................................................................................................... 20 3 9 0.44 4 0 0 0 0 4 0 0 0
.....................TGGACAAGGCGCTCGCGGCTG................................................................................................................................................................................................................ 21 3 3 0.33 1 0 0 0 0 0 0 1 0
..........CCGTTAGAAGTTGGACACG............................................................................................................................................................................................................................. 19 3 12 0.08 1 1 0 0 0 0 0 0 0
................GAAGCCAGACAAGGCGTCC....................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1
...................................................TGAGTAGGCTGGGGG........................................................................................................................................................................................ 15 2 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

TGGGGCTCAAGGCATTCTTCGACCTGTTCCGCGGGCTCCGGCTGTAAGCCCACTCATCCTACCCCTAAAGGGACTTGACACAAAAGGTGTAGAGCTTTGCGTCGACATCAGTTAACAACGATTTACACGTAATGGAAACGTCATTATGTGGGTAATCGTCATCGTCTTAGTAGAATGGTTCTATGCAAATGTTTTTCAGTGTTTCGAAAAAGATCACAAAAGATCTAATTATAAGACAATTATAAGACCT
***************************************************************************.................((((.......(((((((((..(((.(((((.......))))).)))...))))))))))))).........************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553486
Makindu_3 day-old ovaries
..............................................................................................................................................GTTATGTGGGTAATCGTCATC....................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...GGCTCAAGGCATTCTTCGACC.................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................TTCCGTGTCTCGAAAAAGATT................................... 21 3 4 0.25 1 0 1 0 0 0 0
.................................................................................AGAAGGTGTAGAGTTTTGCC..................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0
......TCAAGGAATTCTTCGA.................................................................................................................................................................................................................................... 16 1 6 0.17 1 0 0 0 1 0 0
...........................ACCGCGGGCTCCGGTTGT............................................................................................................................................................................................................. 18 2 7 0.14 1 0 0 1 0 0 0
......................................................................................................................................................................................................GTGTTTGGAAAAAGGGCACA................................ 20 3 10 0.10 1 0 0 1 0 0 0
..............................................................CCCTTAAGGGAGTTGAC........................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0
........CAGGAATTCTTAGACCTGT............................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0
.................................................................................AAAAGGTGTATAGCT.......................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:17374832-17375081 - dsi_15460 ACCCCGAGTTCCGT-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGGGTGAGTAGGATG-------GGGATTTCCCTGAAC---------TGTGT-TTTCCACATCTCGAAACGC------------------------------------------AGCTGTAGTCAATTGTTGCTAAATGTGCATTACCTTTGCAGT---------------------AATACACCC------------------------------ATTAGCAGTAG-----------CAGAATC-----------------ATCT----------TACCAAGATACGTTTACAAAAAGTC--ACAAAGCTTTTTCTAGTGTTTTCTAGATTAA---------------------------TATTCTGTTAATATT-CTGGA----------
droSec2 scaffold_0:9841400-9841668 - ACCCCGAGTTCCGT-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGGGTGAGTAGGATG-------GGGATTTCCCTGAAC---------TGTGT-TTTCCACATCTCGAAACGC------------------------------------------AGCTGTAGTCAATTGTTGTTAAATGTGCATTACCTTTGCAGT---------------------AATACACCG------------------------------ATTAGCAGTAG-----------CAGAATC-----------------ATCT----------TACCAAGATACGTTTACAAAAAGTA--ACAAAGCTTTTTCTAGTGTTTTCTAGATTCAACTAAAGAGACT--------CATTCGTTTTCCTTTTAATATT-CTCGA----------
dm3 chr3L:17794829-17795041 - ACCCTGAGTTCCGT-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGGGTGAGTAGGATG-------GGGATTTCCCTGAAC---------TATGT-TTTCCACATCTTGAAACGC------------------------------------------AGATGTTGTCATTTGTTGCTAAATTTGCATTACCTTTGCAGA---------------------AATACATCG------------------------------ATTA---GTAG-----------CAGAATC-----------------ATCT----------TACCAAAATACTTTTACAAAAAGTCGTATAAAGCAATTTTTA--------------------------------------------------------------------------
droEre2 scaffold_4784:16067911-16068185 + ATCCCGAGTTCCGT-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGGGTGAGTCGAACG-------CTGAATTCCCGGAAC---------TGTGTGTTTCCACGTCTCGAAACGC------------------------------------------TGCTTTAGTCATGTATTGCTAAATGTACAATAC---TACAATAATAGTAATAATTAAATTACTAATACACCG------------------------------AGTA---GTAG-----------AAAAATCATTTACATTCGGGGCTTATCT----------CATCAAAATGCACTTACAAAAAGTCAGATAAA--------------------------------GACATTTCTGTTACCAT----------------ATTCCTCGAATTGTATCCC
droYak3 3L:16262379-16262615 + ATCCCGAGTTCCGT-AAGAAGTTGGACAAAGCGCCCGAGGCCGACATTCGAGTGAGTAGGACG-------CAGACTTCCCGGAAC---------TATGT-ATTCCACGTCTCGAAACGC------------------------------------------AACTATAGTCATTTGTTGCTAAATTGACATTACCTTTGCAGT---------------------AATACACCG------------------------------ATTA---GTAG-----------CAGATTCGTTTACATTCGGAGCTTATCT----------TACCAAAATGCATTTACAAATAGTCAGATAAA--------------------------------GACATTTCTGTTACCAT-----------------------------------
droEug1 scf7180000409471:1759789-1760104 + ACCCCGAGTTCAGA-AAGAAGCTAGACAAGGCGCCCGAGGCTGACATACGGGTAAGTAGAAAG-------GCGATTTCGCGGAAC---------TTTAT-CTTCCACGTCTCGAAAAGATATAGCCTAGGCAAAACCAGAAAACCAATCGCTATATATTGAAATTGTAGTCAG-----------------------------C---------------------GGTACTTGCAATAATTACTTTTAAAACTTCTAGAAATCTATTGTCATTTGTATTTTTAAAATGGAATC-----------------GTTTTTGTCAATTTAAACATTGAATGTTCCAAAAATGTT--CTAAAAGTTTTCTAAGTGTTCCTTATGTTCATAA------------------------AAATTTCTCAATATT-AT-GA----------
droBia1 scf7180000302193:1110786-1110861 - ATCCCGAGTTCCGG-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGCGTAAGTAGGGAG-------GGGATTTCCCGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415794:19901-20051 - ATCCCGAGTTCCGC-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATCCGGGTGAGTAAGGCG-------GGGAGTTCCCGGAAC---------ATCGC-CCTCCACGTCTGAAAA-AC------------------------------------------GCTTGCGACTCGTCATAACTAAGTATTTGCTGTTTCTACAGT---------------------GGTACCCCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490993:716307-716384 - ATCCCGAGTTCCGG-AAGAAGCTGGACAAAGCGCCGGAGGCGGACATTCGGGTGAGTGGAGCG-------GGGATTTCCCGGAAC---------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779490:107512-107618 - ATCCTGAGTTCCGG-AAGAAGCTGGACAAGGCTCCGGAGGCCGATATTCGGGTGAGAAGATCG-------GGTATTTTTGGAAACTCGAAACGTATAGT-CATCCACGTCTGGAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454107:1388157-1388238 - ATCCCGAATTCCGG-AAGAAGTTGGACAAAGCGCCCGAGGCCGACATTCGGGTGAGTGGTGCG-------GGGACTTCCCGGAAC---------TTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302626:218102-218167 + ATCCCGAGTTCCGT-AAGAAGCTGGACAAGGCGCCCGAAGCGGACATTAGGGTAAGTGGAGGA-------GGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:5380020-5380088 + ATCCCGAATTCCGC-AAAAAGTTGGACAAGGCCCCTGAGGCGGACATAAGGGTACGAAAAA-G-------GGGCTTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396371:704785-704880 + ATCCCGAGTTCCGC-AAAAAGTTGGACAAGGCCCCTGAGGCGGACATCAGGGTACGATTAAGA-------GAGATTTCCCTACCA---------TATAG-AATCAATATCTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XR_group6:10667741-10667819 - ATCCCGAGTTCCGC-CAGAAATTGGACAAAGCCCCGGAGGCAGACATACGTGTAAGAGTGTTGGGTGTTGGGGATTTCCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_20:580035-580114 - ATCCCGAGTTCCGCCCAGAAATGGGACAAAGCCCCGGAGGCAGACATACGTGTAAGAGTGTTGGGTGTTGGGGATTTCCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004540:2491775-2491847 + ATCCCGAGTTTCGT-AAGAAGTTAGACAAGGCGCCTGAGGCAGATATACGTGTAAGTAGCATT-------AAAACTCCCCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:24400682-24400737 - ATCCAGAGTTTAGG-AAGAAGCTGGACAAAGCACCTGAGGCCGATATACGTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:23888050-23888130 - ATCCAGAGTTTAGG-AAGAAATTGGACAAAGCACCTGAGGCCGACATACGCGTAAGTTTTACG--ATATGGGTATTTTCCTGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:24306218-24306313 - ATCCCGAGTTTAGG-AAGAAGCTGGACCAAGCGCCTGAGGCCGACATACGTGTAAGTAATTCA-------ATGAGCTGGCGAAAT---------A--GT-TTTTCACTCTTAGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACCCCGAGTTCCGT-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGGGTGAGTAGGATG-------GGGATTTCCCTGAAC---------TGTGT-TTTCCACATCTCGAAACGC------------------------------------------AGCTGTAGTCAATTGTTGCTAAATGTGCATTACCTTTGCAGT---------------------AATACACCC------------------------------ATTAGCAGTAG-----------CAGAATC-----------------ATCT----------TACCAAGATACGTTTACAAAAAGTC--ACAAAGCTTTTTCTAGTGTTTTCTAGATTAA---------------------------TATTCTGTTAATATT-CTGGA----------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............T-AAGAAGCTGGACAAGGCGCC....................................................................................................................................................................................................................................................................................................................................................................................................................2114.00402000000000002000
........................................................................................................................................................................................................................................................................TTAGCAGTAG-----------CAGAATC-----------------ATCT----------T...................................................................................................................2211.00100000000000001000
.............T-AAGAAGCTGGACAAGGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
........TTCCGT-AAGAAGCTGGACAAGGCGCC....................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
.............T-AAGAAGCTGGACAAGGCGTTT...................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
............GT-AAGAAGCTGGACAAGGCGCCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
............GT-AAGAAGCTGGACAAGG........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
....................GCTGGACAAGGCGCCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
............GT-AAGAAGCTGGACAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
........................................................................................................CACATCTCGAAACGC------------------------------------------AGCTGT................................................................................................................................................................................................................................................................................2111.00101000000000000000
...........CGT-AAGAAGCTGGACAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...................................CGAGGCCGACATTCGGGTGAGTAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
............GT-AAGAAGCTGGACAAGGCGCCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
...............AAGAAGCTGGACAAGGCGCCCGG.................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
............GT-AAGAAGCTGGACAAGGCGCCCGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000000000
...............AAGAAGCTGGACAAGGCGCCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
...........CGT-AAGAAGCTGGACAAGGCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
droSec2
ACCCCGAGTTCCGT-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGGGTGAGTAGGATG-------GGGATTTCCCTGAAC---------TGTGT-TTTCCACATCTCGAAACGC------------------------------------------AGCTGTAGTCAATTGTTGTTAAATGTGCATTACCTTTGCAGT---------------------AATACACCG------------------------------ATTAGCAGTAG-----------CAGAATC-----------------ATCT----------TACCAAGATACGTTTACAAAAAGTA--ACAAAGCTTTTTCTAGTGTTTTCTAGATTCAACTAAAGAGACT--------CATTCGTTTTCCTTTTAATATT-CTCGA----------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............GT-AAGAAGCTGGACAAGGCGCC....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
................AGAAGCTGGACAAGGCGCCCGAGGCCG............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
dm3
ACCCTGAGTTCCGT-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGGGTGAGTAGGATG-------GGGATTTCCCTGAAC---------TATGT-TTTCCACATCTTGAAACGC------------------------------------------AGATGTTGTCATTTGTTGCTAAATTTGCATTACCTTTGCAGA---------------------AATACATCG------------------------------ATTA---GTAG-----------CAGAATC-----------------ATCT----------TACCAAAATACTTTTACAAAAAGTCGTATAAAGCAATTTTTA--------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................TGAGTAGGATG-------GGGATTTCCCTGAAC---------.........................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGGCGCCCGAGGCCGACATTCGGAGT.................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CTGGACAAGGCGCCCGAGGCCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGCTGGACAAGGCGCCCGAG................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGCTGGACAAGGCGCCCGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGCTGGACAAGGCGCCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................GATGTTGTCATTTGTTGCTAA................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
......................................GGCCGACATTCGGGTGAGTAGG...........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAGTTCCGT-AAGAAGCTGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....TGAGTTCCGT-AAGAAGCTGGACAAGGCGCC....................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAAGCTGGACAAGGCGCCCGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................TGT-TTTCCACATCTTGAAACG.................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................CATCTTGAAACGC------------------------------------------AGATGTT...............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTGAGTTCCGT-AAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCTGGACAAGGCGCCCGAG................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CCCGAGGCCGACATTCGGGTG.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GGTGAGTAGGATG-------GGGATTTC.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................ATACATCG------------------------------ATTA---GTAG-----------CAGAATC-----------------..................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................GAAGCTGGACAAGGCGCCCGAG................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..............................................TTCGGGTGAGTAGGATG-------GGGA.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................GAAGCTGGACAAGGCGCCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGGACAAGGCGCCCGAGGCCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CTGGACAAGGCGCCCGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......AGTTCCGT-AAGAAGCTGGACAAGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATCTTGAAACGC------------------------------------------AGATGTTGTC............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................AGATGTTGTCATTTGTTGC...................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCGCCCGAGGCCGACATTCGG....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CTGGACAAGGCGCCCGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............T-AAGAAGCTGGACAAGGCGCCATC.................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAGTTCCGT-AAGAAGCTGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..................................................................................................T-TTTCCACATCTTGAAACGC------------------------------------------AGA...................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTTCCGT-AAGAAGCTGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............AAGAAGCTGGACAAGGCGCCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACAAGGCGCCCGAGGCCGACATTCGG....................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGAAGCTGGACAAGGCGCCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......GTTCCGT-AAGAAGCTGGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........CGT-AAGAAGCTGGACAAGGCGCCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GGACAAGGCGCCCGAGGCCGACA.........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACCCTGAGTTCCGT-AAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...CTGAGTTCCGT-AAGAAGCTGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
......................TGGACAAGGCGCCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................CGACATTCGGGTGAGTAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.....................................AGGCCGACATTCGGGTGAG...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATCCCGAGTTCCGT-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGGGTGAGTCGAACG-------CTGAATTCCCGGAAC---------TGTGTGTTTCCACGTCTCGAAACGC------------------------------------------TGCTTTAGTCATGTATTGCTAAATGTACAATAC---TACAATAATAGTAATAATTAAATTACTAATACACCG------------------------------AGTA---GTAG-----------AAAAATCATTTACATTCGGGGCTTATCT----------CATCAAAATGCACTTACAAAAAGTCAGATAAA--------------------------------GACATTTCTGTTACCAT----------------ATTCCTCGAATTGTATCCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................GCTGGACAAGGCGCCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...................AGCTGGACAAGGCGCCCGAG................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
ATCCCGAGTTCCGT-AAGAAGTTGGACAAAGCGCCCGAGGCCGACATTCGAGTGAGTAGGACG-------CAGACTTCCCGGAAC---------TATGT-ATTCCACGTCTCGAAACGC------------------------------------------AACTATAGTCATTTGTTGCTAAATTGACATTACCTTTGCAGT---------------------AATACACCG------------------------------ATTA---GTAG-----------CAGATTCGTTTACATTCGGAGCTTATCT----------TACCAAAATGCATTTACAAATAGTCAGATAAA--------------------------------GACATTTCTGTTACCAT-----------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........TCCGT-AAGAAGTTGGACAAAGCGCCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................28111.0011000000000011
................AGAAGTTGGACAAAGCGCCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2519.00911000000007
....................GTTGGACAAAGCGCCCGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2212.00200100010000
ATCCCGAGTTCCGT-AAGAAGTTGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
....................GTTGGACAAAGCGCCCGAGGCCGA...........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
................AGAAGTTGGACAAAGCGCC....................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
....................GTTGGACAAAGCGCCCGAGGCCGACATT.......................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
..........CCGT-AAGAAGTTGGACAAAGCGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
......................TGGACAAAGCGCCCGAGGCCGA...........................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.......................GGACAAAGCGCCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
droEug1
ACCCCGAGTTCAGA-AAGAAGCTAGACAAGGCGCCCGAGGCTGACATACGGGTAAGTAGAAAG-------GCGATTTCGCGGAAC---------TTTAT-CTTCCACGTCTCGAAAAGATATAGCCTAGGCAAAACCAGAAAACCAATCGCTATATATTGAAATTGTAGTCAG-----------------------------C---------------------GGTACTTGCAATAATTACTTTTAAAACTTCTAGAAATCTATTGTCATTTGTATTTTTAAAATGGAATC-----------------GTTTTTGTCAATTTAAACATTGAATGTTCCAAAAATGTT--CTAAAAGTTTTCTAAGTGTTCCTTATGTTCATAA------------------------AAATTTCTCAATATT-AT-GA----------SizeHit CountTotal NormTotal
No Reads
droBia1
ATCCCGAGTTCCGG-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATTCGCGTAAGTAGGGAG-------GGGATTTCCCGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATCCCGAGTTCCGC-AAGAAGCTGGACAAGGCGCCCGAGGCCGACATCCGGGTGAGTAAGGCG-------GGGAGTTCCCGGAAC---------ATCGC-CCTCCACGTCTGAAAA-AC------------------------------------------GCTTGCGACTCGTCATAACTAAGTATTTGCTGTTTCTACAGT---------------------GGTACCCCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATCCCGAGTTCCGG-AAGAAGCTGGACAAAGCGCCGGAGGCGGACATTCGGGTGAGTGGAGCG-------GGGATTTCCCGGAAC---------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATCCTGAGTTCCGG-AAGAAGCTGGACAAGGCTCCGGAGGCCGATATTCGGGTGAGAAGATCG-------GGTATTTTTGGAAACTCGAAACGTATAGT-CATCCACGTCTGGAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATCCCGAATTCCGG-AAGAAGTTGGACAAAGCGCCCGAGGCCGACATTCGGGTGAGTGGTGCG-------GGGACTTCCCGGAAC---------TTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATCCCGAGTTCCGT-AAGAAGCTGGACAAGGCGCCCGAAGCGGACATTAGGGTAAGTGGAGGA-------GGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
ATCCCGAATTCCGC-AAAAAGTTGGACAAGGCCCCTGAGGCGGACATAAGGGTACGAAAAA-G-------GGGCTTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................AAGTTGGACAAGGCCCCTGAGGCG.............................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.TCCCGAATTCCGC-AAAAAGTTGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
droBip1
ATCCCGAGTTCCGC-AAAAAGTTGGACAAGGCCCCTGAGGCGGACATCAGGGTACGATTAAGA-------GAGATTTCCCTACCA---------TATAG-AATCAATATCTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
ATCCCGAGTTCCGC-CAGAAATTGGACAAAGCCCCGGAGGCAGACATACGTGTAAGAGTGTTGGGTGTTGGGGATTTCCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................AATTGGACAAAGCCCCGGAG................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000002
...................AATTGGACAAAGCCCCGGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........CCGC-CAGAAATTGGACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...CCGAGTTCCGC-CAGAAATTGGACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
....................ATTGGACAAAGCCCCGGAGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...................AATTGGACAAAGCCCCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
ATCCCGAGTTCCGCCCAGAAATGGGACAAAGCCCCGGAGGCAGACATACGTGTAAGAGTGTTGGGTGTTGGGGATTTCCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ATCCCGAGTTTCGT-AAGAAGTTAGACAAGGCGCCTGAGGCAGATATACGTGTAAGTAGCATT-------AAAACTCCCCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................GTTAGACAAGGCGCCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
................AGAAGTTAGACAAGGCGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
....................GTTAGACAAGGCGCCTGAGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
..................................CTGAGGCAGATATACGTAGT.................................................................................................................................................................................................................................................................................................................................................................................................2040.50202000
droVir3
ATCCAGAGTTTAGG-AAGAAGCTGGACAAAGCACCTGAGGCCGATATACGTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................AGAAGCTGGACAAAGCACCTG..................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
....AGAGTTTAGG-AAGAAGCTGGACAAAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000000000000000000000000000000000000000000000000000000000000
................................ACCTGAGGCCGATATACGTA...................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000100000000000000000000000000000000
....AGAGTTTAGG-AAGAAGCTGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.....GAGTTTAGG-AAGAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
................................ACCTGAGGCCGATATACGTAGT.................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.............G-AAGAAGCTGGACAAAGCACCT...................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
...................AGCTGGACAAAGCACCTGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....AGAGTTTAGG-AAGAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000010000000000000000000000000
.......GTTTAGG-AAGAAGCTGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
..................................CTGAGGCCGATATACGTAGT.................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
droMoj3
ATCCAGAGTTTAGG-AAGAAATTGGACAAAGCACCTGAGGCCGACATACGCGTAAGTTTTACG--ATATGGGTATTTTCCTGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............G-AAGAAATTGGACAAAGCACCTGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
.......................GGACAAAGCACCTGAGGCCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........TAGG-AAGAAATTGGACAAAGCACCT...................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........TTAGG-AAGAAATTGGACAAAGCACC....................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............AAGAAATTGGACAAAGCACCT...................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
ATCCCGAGTTTAGG-AAGAAGCTGGACCAAGCGCCTGAGGCCGACATACGTGTAAGTAATTCA-------ATGAGCTGGCGAAAT---------A--GT-TTTTCACTCTTAGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............GG-AAGAAGCTGGACCAAGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
....................GCTGGACCAAGCGCCTGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
.............G-AAGAAGCTGGACCAAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101

Generated: 05/18/2015 at 11:57 AM