ID:dsi_15447 |
Coordinate:2r:5460903-5460967 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [2r_5460453_5460902_+]; CDS [2r_5460453_5460902_+]; CDS [2r_5460968_5461268_+]; exon [2r_5460968_5461268_+]; intron [2r_5460903_5460967_+]
No Repeatable elements found
| ##################################################-----------------------------------------------------------------################################################## CGCCGCGGGCTGCTCAACAGTTTGGGCCAGGAGAATGTGGGCTACGGCAGGTGGGTTGTATATAAGCCACCAATAAGTGTAACTGTAAGTAATTAATGAACCCATCTCCGTGCAGGGATCGCTATCCAGCGGAGAGTTCCGGCACTGAGGGCGAGTCCAGTTTGC **************************************************(((((((........(((((......))).........))........)))))))..........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| .............................................GGCAGGTGGGTTGTA......................................................................................................... | 15 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..................................................GAGGGTTGTATTTAAGCCA................................................................................................ | 19 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ....GCGGGCTGCTCAACA.................................................................................................................................................. | 15 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| .....CGGGCTTCTCAACAG................................................................................................................................................. | 15 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| .........................................................................TAAGTAGAACTGGAAGTAATT....................................................................... | 21 | 3 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 |
| ........................................................................................................................................TTCCGGCACAGAGGGTGAT.......... | 19 | 3 | 16 | 0.06 | 1 | 0 | 0 | 1 | 0 |
| .......................................................................................................................................GTTCTGGCGCTGAGGCCGA........... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
| ................................................................................................................CAGGGATCGCTATGCCG.................................... | 17 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
| ................................................................................................................................GAGGAGAGTTCCGGC...................... | 15 | 1 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
|
GCGGCGCCCGACGAGTTGTCAAACCCGGTCCTCTTACACCCGATGCCGTCCACCCAACATATATTCGGTGGTTATTCACATTGACATTCATTAATTACTTGGGTAGAGGCACGTCCCTAGCGATAGGTCGCCTCTCAAGGCCGTGACTCCCGCTCAGGTCAAACG
**************************************************(((((((........(((((......))).........))........)))))))..........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR902009 testis |
|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................TGGCTAGAGGCACGTCGCTGGC............................................ | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .....................................ACCCGAAGCCGTCCACTCAA............................................................................................................ | 20 | 2 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 |
| ..........ATGAGTTGTCCAACCCG.......................................................................................................................................... | 17 | 2 | 10 | 0.20 | 2 | 0 | 2 | 0 | 0 |
| ..................................................................................................TTGGTTAGAGGCACGT................................................... | 16 | 1 | 8 | 0.13 | 1 | 0 | 1 | 0 | 0 |
| ............................................GCCGTCCACTCAAGATA........................................................................................................ | 17 | 2 | 13 | 0.08 | 1 | 0 | 0 | 1 | 0 |
| ..........................................................................TTCACATTTACATTCATTATA...................................................................... | 21 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
Generated: 04/23/2015 at 03:12 PM