dsi_15433

CDS [3l_20037084_20037200_+]; exon [3l_20037023_20037200_+]; intron [3l_20037201_20038116_+]

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- AAAAAATCTACAATCTAGGCGCTTGCTTCGAACTGGTGGATATTCCTAAGGTTAACTAAAACATAAATTTGTTGTACTCTCTGTTTGAAATGAGAGTTGTGTATTGGGGATTACTGACTTCGGGGATTTTATAATGATAAATTCATTTTGTTTTCTTTTTGATTGGAGTAAATTAGTCATATTGTGACTTGAAACTTAATAGTTAATTAATTTCTTAAAATAGAAAGGCTAGCGAACTGAATATTTATAA ******************************************************************************************..........(((...(((((........(((((......(((((.....)))))......))))).)))))..)))*******************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	SRR553486 Makindu_3 day-old ovaries	M024 male body	SRR553488 RT_0-2 hours eggs	M023 head	O001 Testis	SRR553487 NRT_0-2 hours eggs	SRR902009 testis	SRR553485 Chicharo_3 day-old ovaries	GSM343915 embryo
.............................................................................................................................................TTCATTTTGTTTTCTTTTTGATTGGAGT.................................................................................	28	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0
............................................................................................AGAGTTGTGTATTGGGGAT...........................................................................................................................................	19	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.........................................................................GTACTCTCTGTTTGAAAGGGC............................................................................................................................................................	21	3	1	1.00	1	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................................................................TAGAAAGGCTAGCGAACTGAATATTTA...	27	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................CAAATAGAGAGGCTAGTGAACTGAA.........	25	3	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................GGATATTCCTAAGGTTAA...................................................................................................................................................................................................	18	0	1	1.00	1	0	0	0	0	0	1	0	0	0	0
...............................................................................................................TACTGAATCCGGGGTTTTTA.......................................................................................................................	20	3	6	0.50	3	0	0	0	0	0	0	0	3	0	0
............ATCTAGGCTCTTGCATCGA...........................................................................................................................................................................................................................	19	2	2	0.50	1	1	0	0	0	0	0	0	0	0	0
.............TCTAGGCTCTTGCATCGA...........................................................................................................................................................................................................................	18	2	2	0.50	1	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................................CTTTGATTGGAGTAAATGAG..........................................................................	20	2	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................ATTGTGACCTGAAACT......................................................	16	1	3	0.33	1	1	0	0	0	0	0	0	0	0	0
.......................TGCATCGAACTGGCGTATAT...............................................................................................................................................................................................................	20	3	3	0.33	1	0	0	0	0	0	0	0	0	1	0
............................................................................................AGAGTTGAGTATAGGGGC............................................................................................................................................	18	3	20	0.20	4	0	0	4	0	0	0	0	0	0	0
..............................................................................................................TTACTGACTTCGGAG.............................................................................................................................	15	1	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................TTTTTTTGTGATTGTAGTAAAT.............................................................................	22	3	11	0.09	1	0	0	0	0	0	0	0	0	1	0
..................................GGTGGTCATTTCTAAGGTTA....................................................................................................................................................................................................	20	3	11	0.09	1	0	0	0	0	0	0	0	0	0	1
...................................................................................................GGTATAGGGGATTAATGA.....................................................................................................................................	18	3	20	0.05	1	0	0	0	0	0	0	1	0	0	0
.........................................................................................................................................TTTATTTATTTTGTTTTCTTTTTGA........................................................................................	25	3	20	0.05	1	0	0	0	1	0	0	0	0	0	0

TTTTTTAGATGTTAGATCCGCGAACGAAGCTTGACCACCTATAAGGATTCCAATTGATTTTGTATTTAAACAACATGAGAGACAAACTTTACTCTCAACACATAACCCCTAATGACTGAAGCCCCTAAAATATTACTATTTAAGTAAAACAAAAGAAAAACTAACCTCATTTAATCAGTATAACACTGAACTTTGAATTATCAATTAATTAAAGAATTTTATCTTTCCGATCGCTTGACTTATAAATATT *******************************************************************************..........(((...(((((........(((((......(((((.....)))))......))))).)))))..)))******************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR618934 dsim w501 ovaries
.............................................................................AGAGACAAGCCTTACTCT...........................................................................................................................................................	18	2	9	0.11	1	1	0
.TTTTGTGATGTTGGATCCG......................................................................................................................................................................................................................................	19	3	19	0.05	1	0	1

Species	Coordinate	ID	Alignment
droSim2	3l:20037151-20037400 +	dsi_15433	AAAAAATCTACAATCTAGGCGCTTGCTTCGAACTGGTGGATATTCCTAAGGTTAACTA--------------AAACATAAATTTGTTG-T-A--------------CTCT-----------CTG-TTTGAAATGAGAGTTGTGTATT------------------------GGGGAT--------------------------------------------------------------------------------T--------------------------------------------------------------ACTGACTTCGGGGATTTTAT---AATGAT---------AAATTCATTTT--------------------------------------------------------------------------------------------------GTTTTCTTTTTGATT-----GGAGT---AAATTAGTCATATTGTGACTTGAAACTTA-ATAGT-----------------------------------------------TAATTAA------------------------------TTTCTTAAAATAGAAAGGCTAGCGAA---C--TGAATATTTAT--AA
droSec2	scaffold_11:362738-363003 +		AAAAAATCTACAATCTAGGCGCTTGCTTCGAACTGGTGGATATTCCTAAGGTTAACTA--------------AAACATACATTTGTTG-T-A--------------CTAT-----------CTG-TTTGAAAGGAGAGTTGAGTATA-------------------------GGGTT--------------------------------------------------------------------------------T--------------------------------------------------------------ACTGACTTCGGGGATTTTATAACATCGAT---------AAATTAATTTT--------AT---GTTTT-------------------------------------------------------------------------ATTTTATGTTTTCTTTTTGATT-----GGAGT---AAATTAGTCGTTTTGTGACTTAAAACTTA-ATAGT-----------------------------------------------TAATTAA------------------------------TTTGTTAAAATAGAGAGGCTAGTGAA---C--TGAATATTTAT--AA
dm3	chr3L:20467694-20467950 +		AAAAAATCTACAATCTAGGCGCTTGCTTCGAACTGGTGGATATTCCTAAGGTTAACTA--------------AAACATACATTTATTTGT-A--------------CTCT-----------CTG-CTTGAAAGGGGAGTTCTGTATA-------------------------AAGTA--------------------------------------------------------------------------------T--------------------------------------------------------------ACTGACTTCGGGGATTTTATTATATTGAT---------AAATTAATTTT--------AT---GTTT-------TTGA--------------------------------------------------------ATTTTATATTATATGTTTTCTTTTTGATT-----GAAGCAC-AAATTAGTCATTTT----------------------------------------------------------------------ATTAT------------------------------TTTGTAAGAAGAGAATGGCTAGTGAA---C--TGAATATTTCG--TG
droEre2	scaffold_4784:20168953-20169225 +	der_1465	AAAAAATCTACAATCTAGGCGCTTGCTTTGAGCTGGTGGACATTCCTAAGGTTACCTG--------------AAATATATATTTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTAGTTGGGGGACTTTATTACATCGAT---------AAACTTGCTTT--------TT---ACTA-------TT----------------CAAAATAAAAAGCAAGTTTATCGATGTAATAAAGTCATCATATATTTATCATATATATATTCTTTTTGATT-----AGAGCAACAAATATACCTTT--TTGACTTTAAATTGA-CAAGAAC---------------------------------------------------A------------------------------TTTGTGTAAAGAGAGAGGCTATTAAA---C--TGAATATTA----AA
droYak3	3L:20083106-20083340 -		AAAAAATCTACAACCTAGGCGCTTGCTTCGAACTGGTGGATATTCCTAAGGTTACCTA--------------AATGATATATTTACTC-G-A--------------CTTT-----------CTA-TTTAAAAGGGGTG---------------------------------------------------------------------------------------------------------------------------------------GCTCGAGAATTCGTTCAGGC----------------------------------------------TGACATCGAT---------AAACTTGCTTT--------AT---AT-----------------------------------------------------------------------------------------ATTTTGATT-----AGAGCTCCAAATAAACCTTT--TTGAGTTTAAAATGA-ATAGAAC---------------------------------------------------A------------------------------TTTGTATAAAGTGAGAGGCTATTGAA---C--TGAATATTTAAATTG
droEug1	scf7180000409711:5514316-5514621 -		AAAAGATTTACAATCTGGGCGCTTGCTTTGAATTGGTGGATATACCTAAGGTTAGCGGTGTAATCTTATTCAGAAGATACAT--ATTC-A----------------ATTT-----------CTA-ATTTAAGGGAAATTAACTTTTT------------------------TGGGATTACAACTAATGAAAATTCAAGTATTCTATA---------------------------------CAAACTATCATAAAGTATAATGTCTTAAGTCTAT-----------------------------------------------------------------------AAATA-----------------T----------------AG-------GA-------------------------------------------------------------------------GTCTCTCTTTTCTG-----TGTGT---AGAATAG----------------------------------------------------------------TTTCCTCTAGCC-GATGTTTACTTCAATGGTATTCAATATGCTGCGAATAAATTTAAACAAAAAATATAAAATA---A--CGAGTATT-----AA
droBia1	scf7180000302193:5588484-5588828 -		AAAAGATCTACAATCTGAGCGCTTGCTTCGAGCTCGTGGATATTACAAAGGTTAGATGTGTACCGTTGC-TAGAAGATATACTTATGG-G-G--------------AGCT-----------ATA-ATTAAAGGAAACC-----------------TCAATTATTAATCCATTTTTATTAGAATTAG-GAAAACCCATAAATCTTGTGGTAAGCTGACAAAGTATACGAATTCCTTATA------------------------------------------------------------CACAAAACCCTGGAA--CTA----------C--------TAAAAACTCAAGAAAATA------TCAGTCTTGTTATAATTTTCTATTTCATATATATCA--------------------------------------------------------TATTTAAAATATTTATTCTGCTTTTGACC-----AATGCCA-AGAAATACATAT--GTAGGTGTA----------------------------------------------------------------------------------------------------------------AACTGGTAAA---A--AAAATAGGTAT--AA
droTak1	scf7180000415254:192363-192678 -		AAAAGATCTACAATCTGGGCGCTTGCTTCGAGCTGGTGGATATTCCTAAGGTTAGAGGTGGACCAT----TAGAAGATATTATTATTG-GGG----------------CT-----------CTGATTTAAAATGGGAGAGCTTTGTA--ATTCCC-----------------------------------------------CAACA---------------------------------CAATCAG----------------------------------------TCAGTG--TCACGCAAAAAAATGTAT--CTATTATTTAATTCTAAGAACTGAGTGAATTCATG-----------------T----------------AG-------CTGATTTTTTACCATGTGCAAGGCAAAAAG---------------------------------------------------------------------------------------------------AA-ACAAAGT---ATTATTAAAATGTCAGGTAGAAACTTTGTAGTTCCCAATAGCTAGATGGTTATTTC--TGGT----------------------------CGAAA-------CAA---T--TCAATATTAAT--TA
droEle1	scf7180000491193:4807863-4808168 +		AAAAGATATACAATCTGGGCGCTTGTTTCGAGTTGGTGGATATTCCTAAGGTTAGAAGTGGAACATACT-TAAGAGATACAATTTTTG-GGGCTTTATTAATGTGGA---GGTGGGATTTA--------------------------AAGAGGCTTAACT-------CCAGCG-----AGAACTAA---------------------------TGAGACAGTAC-------------------------------------------------------------GTTTA-----------------------------------------------GAGAGAATTTATCTAAAAACA-----------------------------------------------------------------CAAACTAACCAATATAAATACACCA-CAAATTATTATCTTATCAACAAATTTTTTAACT-----GGTCT---ATAATTGACCTTAAAATATTCGAAACTTTCAATAT-----------------------------------------------TGTTTCG------------------------------TATC-------------------CAA---A--AAAATATTTAC--AT
droRho1	scf7180000777448:17246-17567 +		AAAAGATTTACAATCTGGGCGCCTGCTTCGAGCTGGGGGATATTCCTAAGGTTAGAGGTGGGCTTTACT-TTACA--CTTTAGTTTTG-CGGCCCTGTTTATTTAGG---GTAATATTTTT--------------------------CGTATATTTAATT-------CCATTA-----ATTTTTAT---------------------------TAAGATGGTATCAGAATT-----------------------------------------------------TGC-CT--CTAACATACATATATTTAAATTCATA----------A--------TAGGGACTCCAGTTAAAAACAAAATTGGTTTT--------TTATTATTTC-------------------------------------------------------------------------ATTTTAATTTTTCTATTTAATAATCTTGGTTA---ATAA--G----------A--TAAGATATTTTTTAC------------TGACACGTATCTAAGTTTATTATGTTGCCT---------------------------------------------------------------------------------TTAG--AA
droFic1	scf7180000454113:1854100-1854409 -		AAAAAATCTACAATTTGGGCGCTTGCTTTGAGCTGAGGGATATCCCAAAGGTTAGAGGTAGACCATTCT-TAAAAGTAATGAATATA----------------------------------CTCAATTGAAATAGAAACACA-----A------------------------------------------------------------------------------CGGTGGCTTAGACATGAAAAATCCCGAGATAATATTTATAAAGTGTATAATGCAGGTTTATTTAGTT----------------------------------------------CTACTGCGCG---------AAACTAGGTCA---------------------------------------------------------------------------------------------------------------------------------------ATT--TTGCAATCAAATCTA-CAAAAAAATTGGGATTAAGAGATGTGCTTAAAACTACAAATTTGACTTTAGAAGTATTA-TAATTA--TAAT----------------------------AGAAA-------TAATAATTGTATACATCTAT--AA
droKik1	scf7180000302441:3194889-3194942 +		AGAAGATCTACAACCTGGGTGCTTGCTTCGAGCTGGTGGATATCCCAAAGGTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3	scaffold_13337:10835052-10835105 +		AAAAGATTTACAATCTTGGTGCTTGCTTTGAGTTAGTGGATATCCCAAAGGTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1	scf7180000396569:543816-543868 -		AAAAGATTTACAATCTTGGTGCTTGTTTCGAGCTAGTGGATATTCCAAAGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5	3:4973479-4973539 +		AGAAAATCTACAACCTGGGAGCTTGCTTTGAGCTGGCCGACATATCACAGGTCACATA--------------TAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2	scaffold_40:74815-74892 +		AGAAAATTTACAACCTGGGAGCTTGCTTTGAGCTGGCCGACATATCACAGGTCAGATA--------------TAATTCACGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------AAATGGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2	scf2_1100000004830:480803-480870 -		AAAAAATATATAATTTGGGAGCCTGTTTCGAGTTACAAGACATTCAAAAAGTAAGATC--------------AAAGAAGAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3	scaffold_13049:18866567-18866609 -		AATATATTTACAATTTAGGCGTTAAGTTTGAGCTAAGCGATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2	scaffold_15110:19831999-19832041 -		AATATATTTACAACTTGGGCGCCTACTTCGAGCTAAGCGATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

AAAAAATCTACAATCTAGGCGCTTGCTTCGAACTGGTGGATATTCCTAAGGTTAACTA--------------AAACATAAATTTGTTG-T-A--------------CTCT-----------CTG-TTTGAAATGAGAGTTGTGTATT------------------------GGGGAT--------------------------------------------------------------------------------T--------------------------------------------------------------ACTGACTTCGGGGATTTTAT---AATGAT---------AAATTCATTTT--------------------------------------------------------------------------------------------------GTTTTCTTTTTGATT-----GGAGT---AAATTAGTCATATTGTGACTTGAAACTTA-ATAGT-----------------------------------------------TAATTAA------------------------------TTTCTTAAAATAGAAAGGCTAGCGAA---C--TGAATATTTAT--AA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................TTCATTTT--------------------------------------------------------------------------------------------------GTTTTCTTTTTGATT-----GGAGT---......................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................AGAGTTGTGTATT------------------------GGGGAT--------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAGGCTAGCGAA---C--TGAATATTTA.....	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................GGATATTCCTAAGGTTAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

AAAAAATCTACAATCTAGGCGCTTGCTTCGAACTGGTGGATATTCCTAAGGTTAACTA--------------AAACATACATTTGTTG-T-A--------------CTAT-----------CTG-TTTGAAAGGAGAGTTGAGTATA-------------------------GGGTT--------------------------------------------------------------------------------T--------------------------------------------------------------ACTGACTTCGGGGATTTTATAACATCGAT---------AAATTAATTTT--------AT---GTTTT-------------------------------------------------------------------------ATTTTATGTTTTCTTTTTGATT-----GGAGT---AAATTAGTCGTTTTGTGACTTAAAACTTA-ATAGT-----------------------------------------------TAATTAA------------------------------TTTGTTAAAATAGAGAGGCTAGTGAA---C--TGAATATTTAT--AA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..............CTAGGCGCTTGCTTCGAACTGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0
...........................................................................CATACATTTGTTG-T-A--------------CTAT-----------CTG-TTTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGCTAGTGAA---C--TGAAT..........	20	1	1.00	1	0	0	0	1
..............CTAGGCGCTTGCTTCGAACTGGTGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0
..........................TTCGAACTGGTGGATATTCCTAAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0
..........................TTCGAACTGGTGGATATTCCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0

dm3

AAAAAATCTACAATCTAGGCGCTTGCTTCGAACTGGTGGATATTCCTAAGGTTAACTA--------------AAACATACATTTATTTGT-A--------------CTCT-----------CTG-CTTGAAAGGGGAGTTCTGTATA-------------------------AAGTA--------------------------------------------------------------------------------T--------------------------------------------------------------ACTGACTTCGGGGATTTTATTATATTGAT---------AAATTAATTTT--------AT---GTTT-------TTGA--------------------------------------------------------ATTTTATATTATATGTTTTCTTTTTGATT-----GAAGCAC-AAATTAGTCATTTT----------------------------------------------------------------------ATTAT------------------------------TTTGTAAGAAGAGAATGGCTAGTGAA---C--TGAATATTTCG--TG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..........................TTCGAACTGGTGGATATTCCTAAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	38.00	38	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	1	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	9	0	9	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................TTCGAACTGGTGGATATTCCTAAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	36.00	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	2	0	11	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..........................TTCGAACTGGTGGATATTCCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	20.00	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	3	0	9	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------------------------------------ATTAT------------------------------TTTGTAAGAAGAGAATGGC............................	25	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.................................................................................................................................................TA-------------------------AAGTA--------------------------------------------------------------------------------T--------------------------------------------------------------ACTGACTTCGGGGATTT....................................................................................................................................................................................................................................................................................................................................	25	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...........................................................................................................TCT-----------CTG-CTTGAAAGGGGAGTTCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGGCTAGTGAA---C--TGAAT..........	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................TTCGGGGATTTTATTATATTGAT---------AAAT...........................................................................................................................................................................................................................................................................................................	27	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTTTTCTTTTTGAG....................................................................................................................................................................................	18	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTTTTTGATT-----G.............................................................................................................................................................................	15	8	0.25	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGAATGGCTAGTGTT---..................	18	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

AAAAAATCTACAATCTAGGCGCTTGCTTTGAGCTGGTGGACATTCCTAAGGTTACCTG--------------AAATATATATTTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTAGTTGGGGGACTTTATTACATCGAT---------AAACTTGCTTT--------TT---ACTA-------TT----------------CAAAATAAAAAGCAAGTTTATCGATGTAATAAAGTCATCATATATTTATCATATATATATTCTTTTTGATT-----AGAGCAACAAATATACCTTT--TTGACTTTAAATTGA-CAAGAAC---------------------------------------------------A------------------------------TTTGTGTAAAGAGAGAGGCTATTAAA---C--TGAATATTA----AA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.....................................................................................................................................................................................................................................................................................................................................................ACATCGAT---------AAACTTGCTTT--------TT---.......................................................................................................................................................................................................................................................................................	21	2	1.50	3	1	0	0	0	0	2	0
.......................................................................................................................................................................................................................................................................................................................................TGGGGGACTTTATTACATCGA.........................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................GGGGGACTTTATTACATCGA.........................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................TTTATTACATCGAT---------AAACTTG........................................................................................................................................................................................................................................................................................................	21	2	1.00	2	2	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCAAGTTTATCGATGTAAT............................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCAAGTTTATCGATGTAA.............................................................................................................................................................................................................................	21	2	0.50	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................TTACATCGAT---------AAACTTGCTTT--------T...........................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	1	0

droYak3

AAAAAATCTACAACCTAGGCGCTTGCTTCGAACTGGTGGATATTCCTAAGGTTACCTA--------------AATGATATATTTACTC-G-A--------------CTTT-----------CTA-TTTAAAAGGGGTG---------------------------------------------------------------------------------------------------------------------------------------GCTCGAGAATTCGTTCAGGC----------------------------------------------TGACATCGAT---------AAACTTGCTTT--------AT---AT-----------------------------------------------------------------------------------------ATTTTGATT-----AGAGCTCCAAATAAACCTTT--TTGAGTTTAAAATGA-ATAGAAC---------------------------------------------------A------------------------------TTTGTATAAAGTGAGAGGCTATTGAA---C--TGAATATTTAAATTG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..........................................................................................................................TA-TTTAAAAGGGGTG---------------------------------------------------------------------------------------------------------------------------------------GCTCG...............................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
......................................GATATTCCTAAGGTTACCTA--------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAAAGTGAGAGGCTATTGAA---C--T..............	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
...............TAGGCGCTTGCTTCGAACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0

droEug1

AAAAGATTTACAATCTGGGCGCTTGCTTTGAATTGGTGGATATACCTAAGGTTAGCGGTGTAATCTTATTCAGAAGATACAT--ATTC-A----------------ATTT-----------CTA-ATTTAAGGGAAATTAACTTTTT------------------------TGGGATTACAACTAATGAAAATTCAAGTATTCTATA---------------------------------CAAACTATCATAAAGTATAATGTCTTAAGTCTAT-----------------------------------------------------------------------AAATA-----------------T----------------AG-------GA-------------------------------------------------------------------------GTCTCTCTTTTCTG-----TGTGT---AGAATAG----------------------------------------------------------------TTTCCTCTAGCC-GATGTTTACTTCAATGGTATTCAATATGCTGCGAATAAATTTAAACAAAAAATATAAAATA---A--CGAGTATT-----AA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AAAAGATCTACAATCTGAGCGCTTGCTTCGAGCTCGTGGATATTACAAAGGTTAGATGTGTACCGTTGC-TAGAAGATATACTTATGG-G-G--------------AGCT-----------ATA-ATTAAAGGAAACC-----------------TCAATTATTAATCCATTTTTATTAGAATTAG-GAAAACCCATAAATCTTGTGGTAAGCTGACAAAGTATACGAATTCCTTATA------------------------------------------------------------CACAAAACCCTGGAA--CTA----------C--------TAAAAACTCAAGAAAATA------TCAGTCTTGTTATAATTTTCTATTTCATATATATCA--------------------------------------------------------TATTTAAAATATTTATTCTGCTTTTGACC-----AATGCCA-AGAAATACATAT--GTAGGTGTA----------------------------------------------------------------------------------------------------------------AACTGGTAAA---A--AAAATAGGTAT--AA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AAAAGATCTACAATCTGGGCGCTTGCTTCGAGCTGGTGGATATTCCTAAGGTTAGAGGTGGACCAT----TAGAAGATATTATTATTG-GGG----------------CT-----------CTGATTTAAAATGGGAGAGCTTTGTA--ATTCCC-----------------------------------------------CAACA---------------------------------CAATCAG----------------------------------------TCAGTG--TCACGCAAAAAAATGTAT--CTATTATTTAATTCTAAGAACTGAGTGAATTCATG-----------------T----------------AG-------CTGATTTTTTACCATGTGCAAGGCAAAAAG---------------------------------------------------------------------------------------------------AA-ACAAAGT---ATTATTAAAATGTCAGGTAGAAACTTTGTAGTTCCCAATAGCTAGATGGTTATTTC--TGGT----------------------------CGAAA-------CAA---T--TCAATATTAAT--TA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AAAAGATATACAATCTGGGCGCTTGTTTCGAGTTGGTGGATATTCCTAAGGTTAGAAGTGGAACATACT-TAAGAGATACAATTTTTG-GGGCTTTATTAATGTGGA---GGTGGGATTTA--------------------------AAGAGGCTTAACT-------CCAGCG-----AGAACTAA---------------------------TGAGACAGTAC-------------------------------------------------------------GTTTA-----------------------------------------------GAGAGAATTTATCTAAAAACA-----------------------------------------------------------------CAAACTAACCAATATAAATACACCA-CAAATTATTATCTTATCAACAAATTTTTTAACT-----GGTCT---ATAATTGACCTTAAAATATTCGAAACTTTCAATAT-----------------------------------------------TGTTTCG------------------------------TATC-------------------CAA---A--AAAATATTTAC--AT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AAAAGATTTACAATCTGGGCGCCTGCTTCGAGCTGGGGGATATTCCTAAGGTTAGAGGTGGGCTTTACT-TTACA--CTTTAGTTTTG-CGGCCCTGTTTATTTAGG---GTAATATTTTT--------------------------CGTATATTTAATT-------CCATTA-----ATTTTTAT---------------------------TAAGATGGTATCAGAATT-----------------------------------------------------TGC-CT--CTAACATACATATATTTAAATTCATA----------A--------TAGGGACTCCAGTTAAAAACAAAATTGGTTTT--------TTATTATTTC-------------------------------------------------------------------------ATTTTAATTTTTCTATTTAATAATCTTGGTTA---ATAA--G----------A--TAAGATATTTTTTAC------------TGACACGTATCTAAGTTTATTATGTTGCCT---------------------------------------------------------------------------------TTAG--AA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AAAAAATCTACAATTTGGGCGCTTGCTTTGAGCTGAGGGATATCCCAAAGGTTAGAGGTAGACCATTCT-TAAAAGTAATGAATATA----------------------------------CTCAATTGAAATAGAAACACA-----A------------------------------------------------------------------------------CGGTGGCTTAGACATGAAAAATCCCGAGATAATATTTATAAAGTGTATAATGCAGGTTTATTTAGTT----------------------------------------------CTACTGCGCG---------AAACTAGGTCA---------------------------------------------------------------------------------------------------------------------------------------ATT--TTGCAATCAAATCTA-CAAAAAAATTGGGATTAAGAGATGTGCTTAAAACTACAAATTTGACTTTAGAAGTATTA-TAATTA--TAAT----------------------------AGAAA-------TAATAATTGTATACATCTAT--AA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AGAAGATCTACAACCTGGGTGCTTGCTTCGAGCTGGTGGATATCCCAAAGGTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droAna3

AAAAGATTTACAATCTTGGTGCTTGCTTTGAGTTAGTGGATATCCCAAAGGTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

AAAAGATTTACAATCTTGGTGCTTGTTTCGAGCTAGTGGATATTCCAAAGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGAAAATCTACAACCTGGGAGCTTGCTTTGAGCTGGCCGACATATCACAGGTCACATA--------------TAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
........TACAACCTGGGAGCTTGCTTTGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	39.67	119	0	1	0	1	0	0	8	0	109	0
...............TGGGAGCTTGCTTTGAGCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	12.00	36	0	0	0	0	0	1	0	0	35	0
........TACAACCTGGGAGCTTGCTTTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	4.00	12	0	2	0	0	0	0	4	0	6	0
.......CTACAACCTGGGAGCTTGCTTTGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	3.33	10	0	2	0	0	0	0	0	0	8	0
..............CTGGGAGCTTGCTTTGAGCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	3	2.33	7	0	0	0	0	0	0	0	0	7	0
........TACAACCTGGGAGCTTGCTTTGAGCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	3	2.00	6	0	0	0	0	0	0	0	0	6	0
......TCTACAACCTGGGAGCTTGCTTTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	2.00	6	0	0	0	0	0	0	1	0	5	0
..........CAACCTGGGAGCTTGCTTTGAGCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	1.67	5	0	0	0	0	0	0	0	0	5	0
......TCTACAACCTGGGAGCTTGCTTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	1.33	4	0	0	0	0	0	0	0	0	4	0
.............CCTGGGAGCTTGCTTTGAGCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	1.33	4	0	0	0	0	0	0	0	0	4	0
..........CAACCTGGGAGCTTGCTTTGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	3	1.00	3	0	0	0	0	0	0	0	0	3	0
.........ACAACCTGGGAGCTTGCTTTGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	1.00	3	0	2	0	0	0	0	1	0	0	0
...............TGGGAGCTTGCTTTGAGCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	1.00	3	0	1	0	0	0	0	0	0	2	0
..AAAATCTACAACCTGGGAGCTTGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	1.00	3	0	0	0	0	0	0	2	0	1	0
............................TGAGCTGGCCGACATATCACAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.67	2	0	0	0	0	0	0	2	0	0	0
.GAAAATCTACAACCTGGGAGCTTGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.67	2	0	1	0	0	0	0	1	0	0	0
......TCTACAACCTGGGAGCTTGCTTTGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.67	2	0	0	0	0	0	0	0	0	2	0
............................TGAGCTGGCCGACATATCACAGGTCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.67	2	0	0	0	0	0	0	0	0	2	0
............................TGAGCTGGCCGACATATCACAGGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.67	2	0	0	0	0	0	0	1	0	1	0
...........AACCTGGGAGCTTGCTTTGAGCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.67	2	0	1	0	0	0	0	0	0	1	0
...........AACCTGGGAGCTTGCTTTGAGCTGGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.67	2	0	0	0	0	0	0	0	0	2	0
.........ACAACCTGGGAGCTTGCTTTGAGCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	3	0.33	1	0	0	0	0	0	0	0	0	1	0
.GAAAATCTACAACCTGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	3	0.33	1	0	0	0	0	0	0	0	0	1	0
...AAATCTACAACCTGGGAGCTTGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........TACAACCTGGGAGCTTGCTTTGAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	1	0	0	0
.GAAAATCTACAACCTGGGAGCTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......TCTACAACCTGGGAGCTTGCTTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	1	0
............ACCTGGGAGCTTGCTTTGAGCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	1	0
..............CTGGGAGCTTGCTTTGAGCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	0.33	1	0	0	0	0	0	0	0	0	1	0
......TCTACAACCTGGGAGCTTGCTTTGAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	3	0.33	1	0	0	0	0	0	0	0	0	1	0
...............TGGGAGCTTGCTTTGAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....AATCTACAACCTGGGAGCTTGCTTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	0	1	0
...........AACCTGGGAGCTTGCTTTGAGCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	1	0
...........AACCTGGGAGCTTGCTTTGAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	1	0
..............................AGCTGGCCGACATATCACAGGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	3	0.33	1	0	0	0	0	0	0	0	0	1	0
.GAAAATCTACAACCTGGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........TACAACCTGGGAGCTTGCTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	0.33	1	0	0	0	0	0	0	1	0	0	0
.........ACAACCTGGGAGCTTGCTTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.GAAAATCTACAACCTGGGAGCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	3	0.33	1	0	0	0	0	0	0	1	0	0	0
.......................TGCTTTGAGCTGGCCGACATATCACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	1	0
...............TGGGAGCTTGCTTTGAGCTGGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	3	0.33	1	0	0	0	0	0	0	1	0	0	0
..........CAACCTGGGAGCTTGCTTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....ATCTACAACCTGGGAGCTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	0.33	1	0	0	0	0	0	0	1	0	0	0

droPer2

AGAAAATTTACAACCTGGGAGCTTGCTTTGAGCTGGCCGACATATCACAGGTCAGATA--------------TAATTCACGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------AAATGGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
............................TGAGCTGGCCGACATATCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0

droWil2

AAAAAATATATAATTTGGGAGCCTGTTTCGAGTTACAAGACATTCAAAAAGTAAGATC--------------AAAGAAGAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.............TTTGGGAGCCTGTTTCGAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
...........AATTTGGGAGCCTGTTTCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0

droVir3

AATATATTTACAATTTAGGCGTTAAGTTTGAGCTAAGCGATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

Total

M027
Male-body

M028
Head

M047
Female-body

M061
Embryo

SRR060654
Ovary

SRR060655
Testis

SRR060656
Ovary

SRR060657
Testis

SRR060658
Ovary

SRR060659
Testis

SRR060660
Ovary

SRR060661
Embryo

SRR060662
Embryo

SRR060663
Embryo

SRR060664
Male-body

SRR060665
Female-body

SRR060666
Male-body

SRR060667
Female-body

SRR060668
Male-body

SRR060669
Female-body

SRR060670
Testis

SRR060671
Male-body

SRR060672
Female-body

SRR060673
Ovary

SRR060674
Ovary

SRR060675
Ovary

SRR060676
Ovary

SRR060677
Ovary

SRR060678
Testis

SRR060679
Testis

SRR060680
Testis

SRR060681
Testis

SRR060682
Embryo

SRR060683
Testis

SRR060684
Embryo

SRR060685
Embryo

SRR060686
Embryo

SRR060687
Embryo

SRR060688
Ovary

SRR060689
Testis

SRR1106712
embryo_0-2h

SRR1106713
embryo_0-2h

SRR1106714
embryo_2-4h

SRR1106715
embryo_4-6h

SRR1106716
embryo_4-6h

SRR1106717
embryo_6-8h

SRR1106718
embryo_6-8h

SRR1106719
embryo_8-10h

SRR1106720
embryo_8-10h

SRR1106721
embryo_10-12h

SRR1106722
embryo_10-12h

SRR1106723
embryo_12-14h

SRR1106724
embryo_12-14h

SRR1106725
embryo_14-16h

SRR1106726
embryo_14-16h

SRR1106727
larvae

SRR1106728
larvae

SRR1106729
mixed whole adult body

SRR1106730
embryo_16-30h

V047
Embryo

V053
Head

V116
Male-body

GSM1528803
follicle cells

No Reads

droGri2

AATATATTTACAACTTGGGCGCCTACTTCGAGCTAAGCGATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

-9.6	-9.4	-9.4	-9.4

dsi_15433

3l:20037201-20037350 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads