ID:

dsi_15417

Coordinate:

2l:2265417-2265566 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.0 -19.0 -19.0

Flybase annnotation

exon [2l_2265567_2265631_-]; five_prime_UTR [2l_2265567_2265631_-]; intron [2l_2264758_2265566_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAAAAACAACAGTGGAAAGTTTTATCGTTTAGTTCTGCTACAAGTTCAGCGTAAGTTTTTTCTTGATATTGTACATGTATACATACATGTGTGTGGGAGTTCAACTATATCATAATTATAATCAAATTTTGGAAGAGATATAGCTTATTGTTATAAACAAAGTACTACCCGGCTTATTTAACAAAATAAAATAGTTTCCTTTTTATACGCAAAGAATGAAAAGTAAATAGCTAAATTATTTGTTGCCAGT
**************************************************((((((...............((((((((....))))))))..(((((((....(((((((.........................)))))))....(((((...)))))...))).)))))))))).......................**************************************************
Read size # Mismatch Hit Count Total Norm Total M023
head
M024
male body
SRR618934
dsim w501 ovaries
M025
embryo
M053
female body
O002
Head
SRR553485
Chicharo_3 day-old ovaries
SRR902009
testis
SRR553487
NRT_0-2 hours eggs
SRR553488
RT_0-2 hours eggs
SRR553486
Makindu_3 day-old ovaries
GSM343915
embryo
.................AGTTTTATCGTTTAGTTCTGCT................................................................................................................................................................................................................... 22 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
...........................................................TTCTTGATATTGTACATG............................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ATAGACAAAGTACTGCCCGG.............................................................................. 20 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................AGTTTTATCGTTTAGTTCTGCG................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........AGTGGAAAGTTTTATCGTT............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................TCTGCTACAAGTTCAGCG....................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........GTGGAAAGTTTTATCGTT............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................TTTTATCGTTTAGTTCTGCT................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........AGTGGAAAGTTTTATCGTTTAGTTCTGC.................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......AACAGTGGAAAGTTTTATCGT.............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................GTTCTGCTACAAGTTCAGCG....................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................GTTTTATCGTTTAGTTCTG..................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................TGCTACAAGTTCAGCGTAA.................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................TGTATACATACACGTCTGTGGT......................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
....................................GCTACAAGTTCAGCG....................................................................................................................................................................................................... 15 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTTGGAAGAGATGTA............................................................................................................ 15 1 10 0.50 5 0 0 0 0 0 0 0 0 5 0 0 0
...........GTGGAAAGATTTATCGGT............................................................................................................................................................................................................................. 18 2 6 0.33 2 0 0 0 0 0 0 0 0 1 0 1 0
..........TGTGGAAAGTTTTTTCGGTTA........................................................................................................................................................................................................................... 21 3 7 0.29 2 0 0 0 0 0 0 0 0 2 0 0 0
.........................................................................................................................................................TAAACAAAGTACTACCTGACA............................................................................ 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................ATATGGCTTATTGTTGTA............................................................................................... 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................ACATATATCTGTGTGGGA........................................................................................................................................................ 18 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................................ACAGTAACGAGCTAAATTA............ 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTTTTTGTTGTCACCTTTCAAAATAGCAAATCAAGACGATGTTCAAGTCGCATTCAAAAAAGAACTATAACATGTACATATGTATGTACACACACCCTCAAGTTGATATAGTATTAATATTAGTTTAAAACCTTCTCTATATCGAATAACAATATTTGTTTCATGATGGGCCGAATAAATTGTTTTATTTTATCAAAGGAAAAATATGCGTTTCTTACTTTTCATTTATCGATTTAATAAACAACGGTCA
**************************************************((((((...............((((((((....))))))))..(((((((....(((((((.........................)))))))....(((((...)))))...))).)))))))))).......................**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
SRR553488
RT_0-2 hours eggs
............................................................................................................................................................................................TTTATAAAAGGAAAAATATGAGT....................................... 23 2 1 1.00 1 1 0
.........................................................................................TCACACCCTCAAGTTGA................................................................................................................................................ 17 1 2 0.50 1 0 1
.......................................................................................................................................................................................................AACAAGATGCGTTTCTTCC................................ 19 3 20 0.05 1 0 1
TTTTTTATTGTCACGTTTCAT..................................................................................................................................................................................................................................... 21 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:2265367-2265616 - dsi_15417 AAAAAACAA--CAGTGGAAAGTTTTAT------CGTTTAGTTCTGCTACAAGTTCAGCGTAAGT---TTTTT----CTT-----GATATTGTACA--TGTATAC--ATAC-ATGTGTGT-GGGAGTTCAAC-TATAT---------CA--TAATTATAATCAAATTTTGGAAGAGAT---ATAGCTTATTGTTATAAACAAA----G-------TA------CTACCCGGCTTATTTAACAAAATAAAATAGT-TTCC-TTTTTATACGCAAAGAAT-GAAAAGT------------------------------------------AAA--------------TAGCTAAATTATTTGTTGCCAGT
droSec2 scaffold_5:545983-546221 - AAAAAACAA--CAGTGGAAAGTTTTAT------CGTTTAGTTCTGCTACAAGTTCAGTGTAAGT---TTATT----CTT-----TATATTGTACATATGTGTGT--AAAC-ATGTGTGT-GGGAGTTCAAC-TAAAT---------CA--TAATTATAATCAAATTTTGGAAGAGAT---ATAGCTTA-TAT---------A----G-------TA------CTACCCGGCATATTTAACAAAA-AAAATAGT-TTCC-TTTTTATACGCAAAG--T-GAAAAGT------------------------------------------AAA--------------TAACTAAATTATTTGTCGCCAGT
dm3 chr2L:2374325-2374538 - AAAAAACAA--CAGTGGAAAGTTTTAT------CGTTTAGTTCTGCTACAAGCTCAGCGTAAGT---TTTTT--TTCTT-----TATTTTGTACATATGTGTGT--ATAC-ATGTGTGT-GAGAGTTCAAC-TATAG---------CA--TAATTATAATCAAACTCTGAAAGAGAT---ATAGCTTAATGTTATAAACTAA----G-------TA------CTACCCGGCTTATTTAACC----AAAGAA--------------------------------------------------------------------------------------------T---TCAAATTATTTGTCGCCATT
droEre2 scaffold_4929:2413761-2413993 - AAA-AACAA--CAGTGGAAAGTTTTAT------CGCTTAGTTCTGCTACCAGTTCAGCGTAAGT---CTTTG----G------------------------TAT--ATACAATGTGTGT-GGGAGTTCAGT-AATAG---------CA--TAATTATAATCATATTACGGAAGTGTTATTATAACTTATTGTTATAAACAAA----C-------TACCACACATTCCCGGCTCATTAAAACCCT-AAGGTAGTTTC---TTTTTATATAGAAAA--A-GAAAAGT------------------------------------------AAA--------------TAACAAAGTTAGTTGTGG-----
droYak3 2L:2356875-2357090 - AAAAAACAA--CAGTGGAAAGTTTTAT------CGTTTAGTTCTGCTACAAGTTCAGCGTAAGT---TTTTT----CTA-----T---------------------ATCCAATGTGTGT-GGGAGTTCAAT-AATGG---------CA--TAACTATAATTATATTTTGGAAGTGTAATTATAAATTATTGTTATAA-CAAA----C-------TA-CACACATACCCGGCTCATTTAACCCC--TCGGTTGTT-----TTTTTATATGCAAAA---TGG--------------------------------------------------------------------------ATTTGCTGCAAAG
droEug1 scf7180000409554:4171005-4171290 - AAA------CACAGTGGAAAGTTTTATCTAAG-CATTTAGTTCAGC---AAGTTCAATGTAAGAAGTT---TAATTA-----A-AATTAAGTATA--------T--AACTACAGTGTGG-AGGAGTCAAT-TGCCATCATAGTTTTTA--------TAAACATAA-TTAAAAGGGTTA----------TTGTAACGTGCAAA----A-------GTCAACAACTAGTCGGCTTATTTAACGTTC-AAGGTTATTTAAA-TTTTTATATGCAAAA---TGGG----TTTGTT----TAAATAGGGAAAATAATTACAAATGGACAAGTACATAAGG--A----AT-ATTAAGAGTACCTGTTGTCAGC
droBia1 scf7180000302261:150208-150501 - AAAAAACAACACAGTGGAAAGTTTTATCCAAG-CCTTCAGTTCAGC---AAGTCCAGCGTAAGAAGATT--TAATTG-----GATAAAT-GTTTA--T---CGTATA--AAGAACATGG-GGGAGTT-GT-CATAAT---CATTGCCA--GAA----AA--CCATTCCTAGAGTGCTT----------TCATTATAAACAAA----A-------TACAAC--ACAGCCGGCTTATTTAACAC-C-AAGGTTATATCCC-TTTGTATATGCAAAA---CAGG----TTTGGC----AAAATAA-AAAAATAATTAGAAACACTCAAGTGAACAAGT--AATTAATAAAAAAAAGTACCTGTTGACAAC
droTak1 scf7180000413208:75796-76077 - AAAAAACAACACAGTGGAAAGTTTTATCCAAG-CGTTTAGTTCAGC---AAGTTCAGCGTAAGAAGTTTTTT----GTG-----TA--TAGTT-TTACAAACATATA--TAGAAT-TGG-GGGAGTTTAT-CGCAAT---CATTATCA--TAATTATAACCTCACGTTGAAAGTGCTT----------TTATTATAAAAAAT----C-------TAAAACAAATAGCCGGCTTACCCAACACCC-AACGCTATTTCAA-TTTTTATATGCAAAA---CAGG----TTTCAT----AAAATAGAAAATTTAATTAGAAAA-----------------------AT-AG-TAAAGCACTTGTTGCCTGG
droEle1 scf7180000491273:864999-865254 + AAAAAACAACACAGTGGAAAGTTTTATCAAAG-CGTTTAGTTCTACCACACG----ATGTAAGGGGCTT--TAAGTA-----GATAAT---------------------TAAAATAAGG-GTGAACTAAT-AATAAG---------CA--TTATTATATTTTTATTTCGAAAGTGCTT----------ATGTTACAAACAAA----G----------------CAGCCGGCTAATTTAACACTC-AAGGTTATTG-----------------------AGG----TGTGTT----ACAATATAAAAAATAATCAGAAATGTGCAAGTAATCAAGT--AAATAAT-AGTAGGAGCACCTGTTGCCTGT
droRho1 scf7180000779970:33386-33594 - AAAAAACAACACAGTGGAAAGTTTTATCCAAG-CGTTTAGTTCAGTTGCAA-----ACGTAAGAAATTT--TAATTA-----GATAAA---------------------CAAAATAAGCGGTGAACTAGCC-ATTAT---------CT--TAATTACATTCGTAATTTGGAAGTGTC---A--------AATTACAAACAAA----A----------------CAGTGAGCTTATTTTACATTT-AA-------------------ATAAAA-A--T-GCAAAGT------------------------------------------A---------------TTAATAAAAATACCTGTTGCTCGC
droFic1 scf7180000453924:287400-287584 - AAAAAACAACACAGTGGAAAGTTTTATCCAAT-CGTTTAGTTCTGCCTGAAACCCAAAGTAAGT---TTA--AATTA-----AATAAA---------------------TAAAATATAC---GAGCTTTT----------------CA--TAATTA-----ACATTTTGCAAGTGTT-------------GTTATAAGCGAA----A-------AATAACAAGTAGTCGGCTTAATT---GTTT-AATGCTTTTTAAA--CTTTATATGCAAA----------------------------------------------------------------------------------------------
droKik1 scf7180000302408:651809-652098 - AAAC-ACAACACAGTGGAAAGTTTTATCCAAA-CGTTTAGTTCTGCCACAAGTTGAACGTAAGG---CATTTAATTG-----GATATATAGTTTA--------T--ATATA--CTTTAT-GGGAGTTAAT-TATAA----AATTTTAACAAATTT------AAAGTCAAGTCGTGTTA----------TTATTACAAA--------TTACAAAGC--AAAAAATAACCGGCTAATTACATTCTC-AAGGCTATTATAA-GTTTTATATGCAAAT---CAA-----CTGCAAATGCAAAAAAG-GAAATTAATTAGAAATGCCGAAGTGCTTAAGTGTAATTTAT-TG-TAA----------AACACT
droAna3 scaffold_12916:6080960-6081026 + AAAAAACGA--CAGTGGAAAGTTTTATCCAAACCGTTTAGTTCTGCCACAACATAAAAGTATGT---TTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396568:758568-758811 - AAAAAA-AACATAGTGGAAAGTTTTATCCAAG-TGTTTAGTTCTGCCACAACTTTAAAGTATGT---TTTTT----TTT-----TATGTAGA-CAAATAGATAA--AAACAAAGTTCAT-GGGAGTTTGT-TGCAA---------------AAAAAAGTTTAGTTTCTGATAAAGAT---T-------TTAG------GAAAATATA-------TA--AAACCGAGCCGGCTAATTAGATTCTC-AAGGTTATTTACAGTCTCCATGTAGTATA---TAAG----CTGCGA----TAAATAGGAAAAATAATTAC----------------------------------------------------
dp5 4_group3:4017736-4017795 + AGCTAAAAA--CAGTGGAAAGTTTTATCCAAC-CGCATAGTTCTGCTCCAAGTTCAGGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_1:5490598-5490657 + AGCTAAAAA--CAGTGGAAAGTTTTATCCAAC-CGCATAGTTCTGCTCCAAGTTCAGGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004521:2361795-2361946 - TTTATACGACAGAGTGGAAAGTTTCCTAAAATTTGTTTGTTTCAATAGCAAAGTAAAAGTAAGT---TTTTTAAT-ACGGGTA-ATTTATG----------------------------------------------------------------------------------------------------------------------------------------------------TACAT-AAAACTACATATA-TATTTACATACAAAC-----------------------------------------------CCAAGTACATATGT--AA-----------ATATATATTATGAAATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAAAAACAA--CAGTGGAAAGTTTTAT------CGTTTAGTTCTGCTACAAGTTCAGCGTAAGT---TTTTT----CTT-----GATATTGTACA--TGTATAC--ATAC-ATGTGTGT-GGGAGTTCAAC-TATAT---------CA--TAATTATAATCAAATTTTGGAAGAGAT---ATAGCTTATTGTTATAAACAAA----G-------TA------CTACCCGGCTTATTTAACAAAATAAAATAGT-TTCC-TTTTTATACGCAAAGAAT-GAAAAGT------------------------------------------AAA--------------TAGCTAAATTATTTGTTGCCAGTSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...................AGTTTTAT------CGTTTAGTTCTGCT................................................................................................................................................................................................................................................................................................................................2212.00201100000000000000
......................................................................TT----CTT-----GATATTGTACA--TG............................................................................................................................................................................................................................................................................1812.00220000000000000000
...................AGTTTTAT------CGTTTAGTTCTGCG................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
............AGTGGAAAGTTTTAT------CGTT..........................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
.........................................TCTGCTACAAGTTCAGCG....................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.............GTGGAAAGTTTTAT------CGTT..........................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.....................TTTTAT------CGTTTAGTTCTGCT................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
............AGTGGAAAGTTTTAT------CGTTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................2811.00110000000000000000
.......AA--CAGTGGAAAGTTTTAT------CGT...........................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.......................................GTTCTGCTACAAGTTCAGCG....................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
....................GTTTTAT------CGTTTAGTTCTG..................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
...........................................TGCTACAAGTTCAGCGTAA.................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
............................................GCTACAAGTTCAGCG....................................................................................................................................................................................................................................................................................................................1520.50100000000001000000
droSec2
AAAAAACAA--CAGTGGAAAGTTTTAT------CGTTTAGTTCTGCTACAAGTTCAGTGTAAGT---TTATT----CTT-----TATATTGTACATATGTGTGT--AAAC-ATGTGTGT-GGGAGTTCAAC-TAAAT---------CA--TAATTATAATCAAATTTTGGAAGAGAT---ATAGCTTA-TAT---------A----G-------TA------CTACCCGGCATATTTAACAAAA-AAAATAGT-TTCC-TTTTTATACGCAAAG--T-GAAAAGT------------------------------------------AAA--------------TAACTAAATTATTTGTCGCCAGTSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.......AA--CAGTGGAAAGTTTTAT------CGT...........................................................................................................................................................................................................................................................................................................................................2112.0021001
.......AA--CAGTGGAAAGTTTTAT------CGTT..........................................................................................................................................................................................................................................................................................................................................2212.0020101
...........CAGTGGAAAGTTTTAT------CGTTTAGTTCTG..................................................................................................................................................................................................................................................................................................................................2811.0010100
....................................................................................................GTGT--AAAC-ATGTGTGT-GGGAG..................................................................................................................................................................................................................................................2111.0010100
............AGTGGAAAGTTTTAT------CGTTTAG.......................................................................................................................................................................................................................................................................................................................................2211.0010100
....................................TTAGTTCTGCTACAAGTTCAGTGGCG.................................................................................................................................................................................................................................................................................................................2611.0010100
...................AGTTTTAT------CGTTTAGTTCT...................................................................................................................................................................................................................................................................................................................................1911.0010001
..........................................................................................................AAAC-ATGTGTGT-GGGAGTT................................................................................................................................................................................................................................................1911.0010001
..................................................................................................GTGTGT--AAAC-ATGTGTGT-GGGA...................................................................................................................................................................................................................................................2211.0010100
......................TTTAT------CGTTTAGTTCTGCTACAAGTTCA.......................................................................................................................................................................................................................................................................................................................2811.0010010
...................AGTTTTAT------CGTTTAGTTCTGCT................................................................................................................................................................................................................................................................................................................................2211.0011000
....................................TTAGTTCTGCTACAAGTTCAG......................................................................................................................................................................................................................................................................................................................2111.0010001
.......AA--CAGTGGAAAGTTTTAT------CG............................................................................................................................................................................................................................................................................................................................................2011.0010100
.................AAAGTTTTAT------CGTTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................2311.0010100
............AGTGGAAAGTTTTAT------CGTT..........................................................................................................................................................................................................................................................................................................................................1911.0011000
............AGTGGAAAGTTTTAT------CGTTTAGTTC....................................................................................................................................................................................................................................................................................................................................2511.0010100
............AGTGGAAAGTTTTAT------CGTTTA........................................................................................................................................................................................................................................................................................................................................2111.0010001
.......................................GTTCTGCTACAAGTTCAGTGT...................................................................................................................................................................................................................................................................................................................2111.0010001
........................................................................................TTGTACATATGTGTGT--AAAC-ATGTGTGT-.......................................................................................................................................................................................................................................................2811.0010100
............AGTGGAAAGTTTTAT------CGTTTAGTTCT...................................................................................................................................................................................................................................................................................................................................2611.0010001
...............................................ACAAGTTCAGTGTAAGT---T...........................................................................................................................................................................................................................................................................................................1811.0010001
.........................................TCTGCTACAAGTTCAGTGTAAG................................................................................................................................................................................................................................................................................................................2211.0010001
.........................AT------CGTTTAGTTCTGCTACAAGT..........................................................................................................................................................................................................................................................................................................................2211.0010010
dm3
AAAAAACAA--CAGTGGAAAGTTTTAT------CGTTTAGTTCTGCTACAAGCTCAGCGTAAGT---TTTTT--TTCTT-----TATTTTGTACATATGTGTGT--ATAC-ATGTGTGT-GAGAGTTCAAC-TATAG---------CA--TAATTATAATCAAACTCTGAAAGAGAT---ATAGCTTAATGTTATAAACTAA----G-------TA------CTACCCGGCTTATTTAACC----AAAGAA--------------------------------------------------------------------------------------------T---TCAAATTATTTGTCGCCATTSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
............AGTGGAAAGTTTTAT------CGTTTAGTTCTG..................................................................................................................................................................................................................................................................................................................................27132.00320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121000000000000000000000000000100100000000100000000000210000100000000011000000003135100110000000010000100
.......AA--CAGTGGAAAGTTTTAT------CG............................................................................................................................................................................................................................................................................................................................................20121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000002000000000200000000000000000000000000000000000000000000000000000000000000000000000000001100000000000011000010101120121000100
............AGTGGAAAGTTTTAT------CGTT..........................................................................................................................................................................................................................................................................................................................................19114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000110000010000000000100000000000000000000000000000000000010000000001000000000000002010000000010000200001000000000000000
............AGTGGAAAGTTTTAT------CGTTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................28112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000012000000000000000000000000000000000000000000000000001000000000000001211000000000000001000000000000000010
............AGTGGAAAGTTTTAT------CGTTTAG.......................................................................................................................................................................................................................................................................................................................................22111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000001000000000000001201000000001000001000000000000000000
............AGTGGAAAGTTTTAT------CGTTTAGT......................................................................................................................................................................................................................................................................................................................................23110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000001000000000000000000000000000000000000010000000000000001000000012000000010100000000000000
............AGTGGAAAGTTTTAT------CGTTTAGTT.....................................................................................................................................................................................................................................................................................................................................24110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000020001000000000012100000010000000000000000000000000
............AGTGGAAAGTTTTAT------CGT...........................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000002000000000000000020000000
.......AA--CAGTGGAAAGTTTTAT------C.............................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001000000000001000000001000000000000000110000000
............AGTGGAAAGTTTTAT------CGTTTAGTTCT...................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000011000000000000000020000000000000000
............AGTGGAAAGTTTTAT------CGTTTA........................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000010000100
.......AA--CAGTGGAAAGTTTTAT------CGT...........................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001001000000000002000000000000000000000
.......AA--CAGTGGAAAGTTTTAT------..............................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000011000000000000000000000000000000000
.......AA--CAGTGGAAAGTTTTAT------CGTTT.........................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ACAAGCTCAGCGTAAGT---T...........................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................ATATGTGTGT--ATAC-ATGTGTGT-.......................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AA--CAGTGGAAAGTTTTAT------CGTTTA........................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100010000000
....................GTTTTAT------CGTTTAGTTCTG..................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000002000000000000000000000010000000000
.......AA--CAGTGGAAAGTTTTAT------CGTTTAGT......................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTTAT------CGTTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.......AA--CAGTGGAAAGTTTTAT------CGTT..........................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TTCTGCTACAAGCTCAGCG....................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTTCTGCTACAAGCTCAGCGTAAG................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AA--CAGTGGAAAGTTTTAT------CGTTTAGTT.....................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........A--CAGTGGAAAGTTTTAT------CGT...........................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000
.......................................GTTCTGCTACAAGCTCAGCGTA..................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................TTTTGTACATATGTGTGT--A....................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTTAT------CGTTTAGTTCTGCTAC..............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........A--CAGTGGAAAGTTTTAT------CG............................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000
...AAACAA--CAGTGGAAAGTTTTAT------CGT...........................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000
.......................................GTTCTGCTACAAGCTCAGCG....................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CTGCTACAAGCTCAGCGTAAG................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CAAGCTCAGCGTAAGT---TTT.........................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGTGGAAAGTTTTAT------CGTTT.........................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000
..........................................CTGCTACAAGCTCAGCGTAAGT---T...........................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..................AAGTTTTAT------CGTTTAGTTCTT..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...........................................TGCTACAAGCTCAGCGTA..................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TGTGT--ATAC-ATGTGTGT-G......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAGTTTTAT------CGTTTAGTTC....................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........CAGTGGAAAGTTTTAT------CGTTTAGTT.....................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTTCTGCTACAAGCTCAGCGTAAGT---T...........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................AAGTTTTAT------CGTTTAGTTCTGCTA...............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTTAT------CGTTTAGTTCTGCTA...............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......AA--CAGTGGAAAGTTTTAT------CGTTTAG.......................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.......AA--CAGTGGAAAGTTTTAT------CGTTTAGTTC....................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGTTTTAT------CGTTTAGTTCTGCTACAAG...........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTTAT------CGTTTAGTTCTG..................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTAT------CGTTTAGTTCTGCTACAAGCTCAG......................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...............................................ACAAGCTCAGCGTAAGT---TTT.........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......AA--CAGTGGAAAGTTTTAT------CGTTAGT.......................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTAT------CGTTTAGTTCTGCTA...............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TTCTGCTACAAGCTCAGC.....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TGCTACAAGCTCAGCGTAAGT---TT..........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............GTGGAAAGTTTTAT------CGTTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TGCTACAAGCTCAGCGTAAGT---T...........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................TTCTGCTACAAGCTCAGCGTAAGT---T...........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTTTTAT------CGTTTAGTTCTGCT................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................ATAC-ATGTGTGT-GAGAGT.................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................................TAGTTCTGCTACAAGCTCAGCGTAA.................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................TTCTGCTACAAGCTCAGCGTAAG................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TTAGTTCTGCTACAAGCTCAGCG....................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGTGGAAAGTTTTAT------CGTA..........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGTTTAGTTCTGCTACAAGCTCAGCG....................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CTGCTACAAGCTCAGCGTAAGT---TTT.........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................TTTTAT------CGTTTAGTTCTGCT................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TGT-GAGAGTTCAAC-TATAG---------CA--.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AA--------------------------------------------------------------------------------------------T---TCAAATTATTTGTCGC....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................CTGAAAGAGAT---ATAGCTTAAT.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAGTTTTAT------CGTTTAGT......................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGTGGAAAGTTTTAT------CGTTTAGTTC....................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................AGTTCTGCTACAAGCTCAGCG....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............GTGGAAAGTTTTAT------C.............................................................................................................................................................................................................................................................................................................................................1511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTTAGTTCTGCTACAAGCTCA.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............TGGAAAGTTTTAT------CGTTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTTTTAT------CGTTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............AGTGGAAAGTTTTAT------CGTTTAGTTCTT..................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................................................................T-----TATTTTGTACATATGTGT.........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAACAA--CAGTGGAAAGTT........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................TCTGCTACAAGCTCAGCGTAAGT---T...........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................TCTGCTACAAGCTCAGCG....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............GTGGAAAGTTTTAT------CGTTA.........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................TTTTGTACATATGTGTGT--ATA..................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........A--CAGTGGAAAGTTTTAT------CGTTT.........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CTCTGAAAGAGAT---ATAGCTTAATG................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TGTGTGT--ATAC-ATGTGTG.........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TTAGTTCTGCTACAAGCTCAG......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TCTGCTACAAGCTCAGCGTA..................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................CTCAGCGTAAGT---TTTTT--TTT..................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................AT------CGTTTAGTTCTGCTACAAGCTCAGCG....................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................CTACAAGCTCAGCGTAAGT---TT..........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............AGTGGAAAGTTTTAT------CG............................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAGTGGAAAGTTTTAT------CGTTT.........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AA--CAGTGGAAAGTTTTAT------CGC...........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.AAAAACAA--CAGTGGAAAGTTTTAT------CG............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................CGTTTAGTTCTGCTACAAGC..........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTTAGTTCTGCTACAAGCTCAG......................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................ATTTTGTACATATGTGTGT--G....................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
droEre2
AAA-AACAA--CAGTGGAAAGTTTTAT------CGCTTAGTTCTGCTACCAGTTCAGCGTAAGT---CTTTG----G------------------------TAT--ATACAATGTGTGT-GGGAGTTCAGT-AATAG---------CA--TAATTATAATCATATTACGGAAGTGTTATTATAACTTATTGTTATAAACAAA----C-------TACCACACATTCCCGGCTCATTAAAACCCT-AAGGTAGTTTC---TTTTTATATAGAAAA--A-GAAAAGT------------------------------------------AAA--------------TAACAAAGTTAGTTGTGG-----SizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
............AGTGGAAAGTTTTAT------CGCT..........................................................................................................................................................................................................................................................................................................................................1914.0040000310
............AGTGGAAAGTTTTAT------CGCTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................2811.0010000100
......................................................................................................AT--ATACAATGTGTGT-GGG....................................................................................................................................................................................................................................................1811.0010000010
..............................................................................................................................................................ATCATATTACGGAAGTGTT..............................................................................................................................................................................................1911.0010000100
......................................................................................................AT--ATACAATGTGTGT-GGGA...................................................................................................................................................................................................................................................1911.0010000100
...................................................GTTCAGCGTAAGT---CTTTG----G------------------------TAT--ATACA................................................................................................................................................................................................................................................................2711.0010000100
................................................................................................................TGTGTGT-GGGAGTTCAGT-AATAG---------A............................................................................................................................................................................................................................2411.0010000100
.......................................GTTCTGCTACCAGTTCAGC.....................................................................................................................................................................................................................................................................................................................1911.0010000010
......................................................................................................................................................................................................................................CTCATTAAAACCCT-AAGGTAGT..................................................................................................................2211.0010000100
.....................................TAGTTCTGCTACCAGTTC........................................................................................................................................................................................................................................................................................................................1811.0010000010
...................................................................CTTTG----G------------------------TAT--ATACAATGTGTGT-GGGAG..................................................................................................................................................................................................................................................2711.0010000100
.............GTGGAAAGTTTTAT------CGCTTAGTT.....................................................................................................................................................................................................................................................................................................................................2311.0010000100
.............................................................................................................CAATGTGTGT-GGGAGTTCAG.............................................................................................................................................................................................................................................2011.0010000100
.............................................................................................................................................................AATCATATTACGGAAGTG................................................................................................................................................................................................1811.0010000010
..............................................................................................................................................................ATCATATTACGGAAGTGTTATTAT.........................................................................................................................................................................................2411.0010000100
..................................................................................................................TGTGT-GGGAGTTCAGT-AATAG---------CA--TAAT.....................................................................................................................................................................................................................2711.0010000100
.................AAAGTTTTAT------CGCTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................2311.0010000010
........A--CAGTGGAAAGTTTTAT------CGCTTAGTTC....................................................................................................................................................................................................................................................................................................................................2711.0010000100
......................................................................................................................................................TAATTATAATCATATTACGGAAGTG................................................................................................................................................................................................2511.0010000010
..................AAGTTTTAT------CGCTTAGTTCTGCTACC.............................................................................................................................................................................................................................................................................................................................2611.0011000000
droYak3
AAAAAACAA--CAGTGGAAAGTTTTAT------CGTTTAGTTCTGCTACAAGTTCAGCGTAAGT---TTTTT----CTA-----T---------------------ATCCAATGTGTGT-GGGAGTTCAAT-AATGG---------CA--TAACTATAATTATATTTTGGAAGTGTAATTATAAATTATTGTTATAA-CAAA----C-------TA-CACACATACCCGGCTCATTTAACCCC--TCGGTTGTT-----TTTTTATATGCAAAA---TGG--------------------------------------------------------------------------ATTTGCTGCAAAGSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
............AGTGGAAAGTTTTAT------CGTTT.........................................................................................................................................................................................................................................................................................................................................2013.00302000010000
.....................................................................................................................GT-GGGAGTTCAAT-AATGG---------C............................................................................................................................................................................................................................1912.00200000020000
.................AAAGTTTTAT------CGTTTAGTTCT...................................................................................................................................................................................................................................................................................................................................2111.00110000000000
................................................................................................................................................................TATATTTTGGAAGTGTAATT...........................................................................................................................................................................................2011.00100000010000
..........................................................GTAAGT---TTTTT----CTA-----T---------------------ATCCAATGTGTGT-.......................................................................................................................................................................................................................................................2811.00100000010000
.....................TTTTAT------CGTTTAGTTCTGCTACA.............................................................................................................................................................................................................................................................................................................................2311.00110000000000
.............................................................................................................................................................AATTATATTTTGGAAGTGTA..............................................................................................................................................................................................2011.00100000010000
.......AA--CAGTGGAAAGTTTTAT------CGTTTAGTTC....................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.......AA--CAGTGGAAAGTTTTAT------..............................................................................................................................................................................................................................................................................................................................................1811.00100000100000
...........................................................................................................................................................ATAATTATATTTTGGAAGTGTA..............................................................................................................................................................................................2211.00100000010000
................................................................................................................................................................TATATTTTGGAAGTGTAATTATAAATTATT.................................................................................................................................................................................3011.00100000010000
........................................................................................................................GGGAGTTCAAT-AATGG---------CA--TAACT....................................................................................................................................................................................................................2311.00100000010000
.....................TTTTAT------CGTTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................TTAT------CGTTTAGTTCTGCTACAAGT..........................................................................................................................................................................................................................................................................................................................2411.00101000000000
....................................TTAGTTCTGCTACAAGTTCAGCGTAA.................................................................................................................................................................................................................................................................................................................2611.00100000010000
............................................................................CTA-----T---------------------ATCCAATGTGTGT-GGGA...................................................................................................................................................................................................................................................2111.00100000010000
.......AA--CAGTGGAAAGTTTTAT------CGTTTAG.......................................................................................................................................................................................................................................................................................................................................2511.00101000000000
....................GTTTTAT------CGTTTAGTTCTGCT................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..................AAGTTTTAT------CGTTTAGTTCTGC.................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.........................AT------CGTTTAGTTCTGCTACAAGTTC........................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................AT------CGTTTAGTTCTGCTACAAGTT.........................................................................................................................................................................................................................................................................................................................2311.00100000010000
..................AAGTTTTAT------CGTTTAGTTCTGCTACAA............................................................................................................................................................................................................................................................................................................................2711.00100000010000
.......AA--CAGTGGAAAGTTTTAT------CGT...........................................................................................................................................................................................................................................................................................................................................2111.00100100000000
........A--CAGTGGAAAGTTTTAT------CGTTTAGTTCT...................................................................................................................................................................................................................................................................................................................................2811.00110000000000
....................................................................TTTT----CTA-----T---------------------ATCCAATGTGTGT-.......................................................................................................................................................................................................................................................2111.00100000010000
..................................GTTTAGTTCTGCTACAAGT..........................................................................................................................................................................................................................................................................................................................1911.00100100000000
..........................T------CGTTTAGTTCTGCTACAAGT..........................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................................................................................................ATATTTTGGAAGTGTAATTATA........................................................................................................................................................................................2211.00100000010000
droEug1
AAA------CACAGTGGAAAGTTTTATCTAAG-CATTTAGTTCAGC---AAGTTCAATGTAAGAAGTT---TAATTA-----A-AATTAAGTATA--------T--AACTACAGTGTGG-AGGAGTCAAT-TGCCATCATAGTTTTTA--------TAAACATAA-TTAAAAGGGTTA----------TTGTAACGTGCAAA----A-------GTCAACAACTAGTCGGCTTATTTAACGTTC-AAGGTTATTTAAA-TTTTTATATGCAAAA---TGGG----TTTGTT----TAAATAGGGAAAATAATTACAAATGGACAAGTACATAAGG--A----AT-ATTAAGAGTACCTGTTGTCAGCSizeHit CountTotal NormTotal
No Reads
droBia1
AAAAAACAACACAGTGGAAAGTTTTATCCAAG-CCTTCAGTTCAGC---AAGTCCAGCGTAAGAAGATT--TAATTG-----GATAAAT-GTTTA--T---CGTATA--AAGAACATGG-GGGAGTT-GT-CATAAT---CATTGCCA--GAA----AA--CCATTCCTAGAGTGCTT----------TCATTATAAACAAA----A-------TACAAC--ACAGCCGGCTTATTTAACAC-C-AAGGTTATATCCC-TTTGTATATGCAAAA---CAGG----TTTGGC----AAAATAA-AAAAATAATTAGAAACACTCAAGTGAACAAGT--AATTAATAAAAAAAAGTACCTGTTGACAACSizeHit CountTotal NormTotal
No Reads
droTak1
AAAAAACAACACAGTGGAAAGTTTTATCCAAG-CGTTTAGTTCAGC---AAGTTCAGCGTAAGAAGTTTTTT----GTG-----TA--TAGTT-TTACAAACATATA--TAGAAT-TGG-GGGAGTTTAT-CGCAAT---CATTATCA--TAATTATAACCTCACGTTGAAAGTGCTT----------TTATTATAAAAAAT----C-------TAAAACAAATAGCCGGCTTACCCAACACCC-AACGCTATTTCAA-TTTTTATATGCAAAA---CAGG----TTTCAT----AAAATAGAAAATTTAATTAGAAAA-----------------------AT-AG-TAAAGCACTTGTTGCCTGGSizeHit CountTotal NormTotal
No Reads
droEle1
AAAAAACAACACAGTGGAAAGTTTTATCAAAG-CGTTTAGTTCTACCACACG----ATGTAAGGGGCTT--TAAGTA-----GATAAT---------------------TAAAATAAGG-GTGAACTAAT-AATAAG---------CA--TTATTATATTTTTATTTCGAAAGTGCTT----------ATGTTACAAACAAA----G----------------CAGCCGGCTAATTTAACACTC-AAGGTTATTG-----------------------AGG----TGTGTT----ACAATATAAAAAATAATCAGAAATGTGCAAGTAATCAAGT--AAATAAT-AGTAGGAGCACCTGTTGCCTGTSizeHit CountTotal NormTotal
No Reads
droRho1
AAAAAACAACACAGTGGAAAGTTTTATCCAAG-CGTTTAGTTCAGTTGCAA-----ACGTAAGAAATTT--TAATTA-----GATAAA---------------------CAAAATAAGCGGTGAACTAGCC-ATTAT---------CT--TAATTACATTCGTAATTTGGAAGTGTC---A--------AATTACAAACAAA----A----------------CAGTGAGCTTATTTTACATTT-AA-------------------ATAAAA-A--T-GCAAAGT------------------------------------------A---------------TTAATAAAAATACCTGTTGCTCGCSizeHit CountTotal NormTotal
No Reads
droFic1
AAAAAACAACACAGTGGAAAGTTTTATCCAAT-CGTTTAGTTCTGCCTGAAACCCAAAGTAAGT---TTA--AATTA-----AATAAA---------------------TAAAATATAC---GAGCTTTT----------------CA--TAATTA-----ACATTTTGCAAGTGTT-------------GTTATAAGCGAA----A-------AATAACAAGTAGTCGGCTTAATT---GTTT-AATGCTTTTTAAA--CTTTATATGCAAA----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAAC-ACAACACAGTGGAAAGTTTTATCCAAA-CGTTTAGTTCTGCCACAAGTTGAACGTAAGG---CATTTAATTG-----GATATATAGTTTA--------T--ATATA--CTTTAT-GGGAGTTAAT-TATAA----AATTTTAACAAATTT------AAAGTCAAGTCGTGTTA----------TTATTACAAA--------TTACAAAGC--AAAAAATAACCGGCTAATTACATTCTC-AAGGCTATTATAA-GTTTTATATGCAAAT---CAA-----CTGCAAATGCAAAAAAG-GAAATTAATTAGAAATGCCGAAGTGCTTAAGTGTAATTTAT-TG-TAA----------AACACTSizeHit CountTotal NormTotal
No Reads
droAna3
AAAAAACGA--CAGTGGAAAGTTTTATCCAAACCGTTTAGTTCTGCCACAACATAAAAGTATGT---TTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
.......GA--CAGTGGAAAGTTTTATCCAAACCGT...........................................................................................................................................................................................................................................................................................................................................2712.002000011
droBip1
AAAAAA-AACATAGTGGAAAGTTTTATCCAAG-TGTTTAGTTCTGCCACAACTTTAAAGTATGT---TTTTT----TTT-----TATGTAGA-CAAATAGATAA--AAACAAAGTTCAT-GGGAGTTTGT-TGCAA---------------AAAAAAGTTTAGTTTCTGATAAAGAT---T-------TTAG------GAAAATATA-------TA--AAACCGAGCCGGCTAATTAGATTCTC-AAGGTTATTTACAGTCTCCATGTAGTATA---TAAG----CTGCGA----TAAATAGGAAAAATAATTAC----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AGCTAAAAA--CAGTGGAAAGTTTTATCCAAC-CGCATAGTTCTGCTCCAAGTTCAGGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.................................CGCATAGTTCTGCTCCAAGTTCAGGG....................................................................................................................................................................................................................................................................................................................2611.0010100000000
...............GGAAAGTTTTATCCAAC-CGCATA........................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
AGCTAAAAA--CAGTGGAAAGTTTTATCCAAC-CGCATAGTTCTGCTCCAAGTTCAGGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
No Reads
droWil2
TTTATACGACAGAGTGGAAAGTTTCCTAAAATTTGTTTGTTTCAATAGCAAAGTAAAAGTAAGT---TTTTTAAT-ACGGGTA-ATTTATG----------------------------------------------------------------------------------------------------------------------------------------------------TACAT-AAAACTACATATA-TATTTACATACAAAC-----------------------------------------------CCAAGTACATATGT--AA-----------ATATATATTATGAAATTSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...ATACGACAGAGTGGAAAGT.........................................................................................................................................................................................................................................................................................................................................................1911.00100100
...ATACGACAGAGTGGAAAGTTT.......................................................................................................................................................................................................................................................................................................................................................2111.00100010
TTTATACGACAGAGTGGAAAGT.........................................................................................................................................................................................................................................................................................................................................................2211.00100010
.......GACAGAGTGGAAAGTTTCCT....................................................................................................................................................................................................................................................................................................................................................2011.00100010
.......GACAGAGTGGAAAGTTTCCTAAA.................................................................................................................................................................................................................................................................................................................................................2311.00100100

Generated: 05/18/2015 at 01:05 PM