ID:

dsi_15364

Coordinate:

3l:341346-341495 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [3l_341496_341617_-]; exon [3l_341496_341617_-]; intron [3l_340491_341495_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGTCCACGCTGACTAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTGTCCGCTCTTTGTTCCTCCTATCCTTGAGAGAAACTATCCTTCCTTTGTTTTTTCTTAAGTTGTGTGTTGCTCTTTTTATTTGTGTTCGCTCTTGTAGTCACATTTCTAACCGAATAGTTTTGGGATTATGAATTGTGTTTTGTTTTTGGTTTTAATAATTTTTTCGTTGGCCCTAGGAGTTATTTCTAATGTA
**************************************************..(((((..(((.....((..........(((((((((((.((.........)).))))))))))).........))...........)))..))))).......((((.((((((((.((.....)).)).))).))).))))......**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
M024
male body
SRR553488
RT_0-2 hours eggs
M023
head
M053
female body
SRR618934
dsim w501 ovaries
....................................................................................................................................................................AACCGAATAGTTCTGGG..................................................................... 17 1 1 1.00 1 1 0 0 0 0 0
........CTGGCTAAGCGCGGCGGA................................................................................................................................................................................................................................ 18 3 20 0.95 19 0 11 0 6 2 0
........CTGGCTAAGCGCGGCGGAC............................................................................................................................................................................................................................... 19 3 8 0.75 6 0 6 0 0 0 0
......................................................................................................TGTTTTTTCTTCATTTGAGTGTT............................................................................................................................. 23 3 5 0.40 2 2 0 0 0 0 0
.....................................................................TCCACCTTTCCTTGAGA.................................................................................................................................................................... 17 2 5 0.20 1 1 0 0 0 0 0
..............................TCAACTCGTCAGGCTATC.......................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 1 0 0 0
.......................................................................................................................................................................CGGATAGTATTTGGATTATG............................................................... 20 3 7 0.14 1 0 0 1 0 0 0
.......................................................................CTCCTATCTTTGTGAGA.................................................................................................................................................................. 17 2 7 0.14 1 1 0 0 0 0 0
...............................................CTGTTGAGTATCCGCTCT......................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

TCAGGTGCGACTGATTCGCGCCGACAGTGAAGTTTAGGAGTCCGATAGCCCACTCACAGGCGAGAAACAAGGAGGATAGGAACTCTCTTTGATAGGAAGGAAACAAAAAAGAATTCAACACACAACGAGAAAAATAAACACAAGCGAGAACATCAGTGTAAAGATTGGCTTATCAAAACCCTAATACTTAACACAAAACAAAAACCAAAATTATTAAAAAAGCAACCGGGATCCTCAATAAAGATTACAT
**************************************************..(((((..(((.....((..........(((((((((((.((.........)).))))))))))).........))...........)))..))))).......((((.((((((((.((.....)).)).))).))).))))......**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
M024
male body
GSM343915
embryo
SRR618934
dsim w501 ovaries
SRR553487
NRT_0-2 hours eggs
SRR553485
Chicharo_3 day-old ovaries
.........................................................................................TGATAGGAAGCTAACAATAAAGA.......................................................................................................................................... 23 3 2 0.50 1 0 1 0 0 0 0
.........................AGTGAAGTTTCGGAG.................................................................................................................................................................................................................. 15 1 10 0.50 5 5 0 0 0 0 0
....................................................................................CTCTTTGATGCGAAGGAA.................................................................................................................................................... 18 2 5 0.20 1 0 0 1 0 0 0
....................................GGAGTCCGCTAGTCCA...................................................................................................................................................................................................... 16 2 14 0.07 1 0 0 0 1 0 0
..........................GTGAAGTTTCGGAGT................................................................................................................................................................................................................. 15 1 15 0.07 1 0 0 0 0 1 0
.......................................................................................................................................................................................................................AAAAAAGCTACCGTGAACCT............... 20 3 19 0.05 1 0 0 0 0 0 1
...........................................................................ATAGGAACTCTGTTCG............................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0
......................................AATCCGATCGCCCACT.................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0
....................................................................................................................................................................................................................................GGATCCCCAATAACGA...... 16 2 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:341296-341545 - dsi_15364 AGTCCACGCTGACTAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTGTCCGCT--------------------------------------------CT-TT-GT--TCCTCC--TATC-------CTTGAGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTCCTTTGTTTTTTC-TTAAGTTGTGTGTTG---------CT---CTTTTTATTTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCACATTTCTAACCGAATAGTT-------TTGGG-ATTATGA------ATTGTGTT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGTTTTAA-T-------AAT-TTTTTCGTTGGCCCTAGGAGTTAT--TT------CTA--ATGTA
droSec2 scaffold_2:400022-400272 - AGTCCACGCTGACTAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTGTCCGCT--------------------------------------------CT-TT-GT--TCCTCC--TATC-------CTTGAGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTCCTTTGATTTTTC-TTAAGTTGTGTGTTG---------CT---CTTTTTATTTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCACATTTCTAACCGATCAGTT-------TTGGG-ATTATGA------ATTGTATT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGTTTTAATT-------AAT-TTTTTCGTTGGCCCTAGGAGTTAC--TT------CTA--ATGTA
dm3 chr3L:370406-370656 - AGTCCACGCTGACCAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTTTCCACT--------------------------------------------CT-GT-GT--TCCTCC--TATC-------CTTGAGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTCCTTTGTTTTTTC-TTTATTTGTGTGTTG---------CT---CTTTTTATTTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCACATTTCTAACCGAATAGTT-------TTGGG-ATTATAA------ATTGTGTT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGTTTTAATT-------AAT-TTTTTCGTTGGCCCTAGGAGTTAT--TT------CTA--ATGTA
droEre2 scaffold_4784:371070-371338 - AGTCCACGCTGACTAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTTTCCACT--------------------------------------------CT-TG-GTTCTGCTGC--TATC-------CTTGCGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTCCTTTGTTTTGCC-TTAAGTTGTGTATTG---------CT---CT-TTTATTTGTG-TTCC-----C--------------------------------------------------T---C--TTGTAGTCGCATTTCTAACCGAATAGTT-------TTGGG-ATTTTGA-----------------------------------------------------------------------------------------------------------CTTATGAATTATGAAT----------------------TAT-GTGTTTTGTT----------------------------------------------------------------------------------TTTT-----GGTTCTAATT-------AAT-TTTTTGGTTGGCCCTAGGAGTTAT--TT------CTA--ATGTA
droYak3 3L:350401-350670 - AGTCCACGCTGACTAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTTTCCACA--------------------------------------------CT-CCTCT-CTGCTGC--TATC-------CTTGCGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTACTTTGTTT-TCC-CTAAGTTGTGTATTG---------CT---CTTTTTGTTTGTG-TTCC-----C--------------------------------------------------T---C--TTGTAGTCACATTTCTAACCGAATAGTT-------TTGGG-ATTATGC-----------------------------------------------------------------------------------------------------------GTTGTGAATTATGTTT----------------------TGTTTTGTTTTGTT----------------------------------------------------------------------------------TTTT-----GGTTCTAATT-------AAT-TTTTTCGTTGGCCCTAGGAGTTAT--TT------CTA--ATGTA
droEug1 scf7180000409184:394386-394639 - AGTCCACTCTGACCAAGCGCGGCTGTCACTTCAAGTCCTCTGGCTATCGGGTGAGTGTCCATG--------------------------------------------CA-CT-T---TCTTGC--TATC-------ATCCAAA-----------------------------------------------------------------------------------------------------------------------GA--------------------------------------------CTAT--CCTTACTTTCGTTTCTCTTCGAGTTTCGTATTG---------TTTGACTTTTGACCTAAG-TTGC-----C--------------------------------------------------C---T--TTGTAGTCACATTGCTAACTGAACAGTT-------TTGGGGATATTGGGT-----TTGTGTTT--------------------------------------------------------------------------------------------------------------------------------------------C-TGT---------------------------------------------------------------------------------TTTT-----GGT-TTGTTT-------AAC-TCTTGAGTTGGCCCTAGGACTTGT--TT------GTT--ATGTA
droBia1 scf7180000300910:435675-435923 - AGTCCACGTTGACGAAACGCGGGTGCCACTTCAAATCCTCAGGCTATCGGGTGAGTTTTCAGA--------------------------------------------CC-TT-TT--CGTTGC--TGTC-------CACCA-A------------------C---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTTT--CTTTGTTTTTATTCCAC-CTAAGTTCTGTAATG---------TT---TT-GTTATGT-TG-TTGC------------------------------------------------------------C--CCGTAGACATATTTCTAACTGAATAGTT-------TTGGGGATTGTGATTTGTA----TGTTC--------------------------------------------------------------------------------------------------------------------------------------------T-TAT----------------------------------------------------------------------------------TTC-----CGTTTTATTT-------AAT-CTTTTCGTTGGCCCTAGGAGTTGT--TT------CTA--ATGTA
droTak1 scf7180000415846:356467-356707 + AGTCCACTTTGACCAAACGCGGCTGTCACTTCAAATCTTCAGGCTATCGGGTGAGTTTTCAAA--------------------------------------------ACCTT-CT-TTCTTGC--TATC-------CACAAAA------------------G---------------------------------------------------------------------------------------------------AGA--------------------------------------------CTAT--CCTTATTTTTATTTTTC-GTAAGTTTTGTATGA---------TT-----------------------------------------------------------------------------T---T--TTGTAGTCAT-TTTCTAACTGAATAGAT-----TTTTGGGGATTGTGTTTGTTA----TATTT--------------------------------------------------------------------------------------------------------------------------------------------T-TAT----------------------------------------------------------------------------------TTC-----CGTTTTATTTTA------CCTTTTTTCGTTGGCCCTAGGAGTTGT--TT------CTA--ATGTA
droEle1 scf7180000491249:466784-467044 - AGTCTACACTGACCAAACGCGGCTGTCACTTCAAATCCTCTGGCTATCGGGTGAGTTTGCCAA--------------------------------------------TC-TT-A---TCTTTC--TATC-------CTCCAAT------------------C---------------------------------------------------------------------------------------------------AAA---------------------------------------CTA--CTAT--CCTTATTTGTACTTTTCTTTAAGTTTTGTATTG---------TT------TTTATTTGTT-CTCC-----C--------------------------------------------------C---C--TCGTAGAAATATTTCTAACTGAATAGTT-------TTGGGGATTATTTTTTT-----CTGTTT--------------------------------------------------------------------------------------------------------------------------------------------C-TGTT---------------------------------------------------------------------------------TTTGTTTTGATTTTATTA-------AAC-TTTTTCGTTGGCCCTAGGAGTTGCTTTT------TTA--ATGAA
droRho1 scf7180000777778:13335-13586 + AGTCCACACTGACCAAACGCGGCTGTCATTTCAAGTCCTCCGGCTATCGGGTGAGTTTTCACA--------------------------------------------AC-TT-GT--TTGTTC--TACC-------CTCCAAA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTATTTGAATTTTTATTTAAGTTTTGTATTG---------AT------TTGATTTGGT-TTCC-----C--------------------------------------------------C---T--TCGTAGCCATTTTTCTAACTGAATAGTT-------CTGGGTATTATTATTTTTC----TGTTT--------------------------------------------------------------------------------------------------------------------------------------------T-TGT----------------------------------------------------------------------------------TTT-----GGTTTTATTT-------AAC-TTTTTCGTTGGCCTTAGGAGTTGT--TT------CTA--ATGTA
droFic1 scf7180000454105:482455-482716 - AGTCCACGCTGACCAAACGCGGCTGTCACTTCAAGTCCTCCGGCTATCGGGTGAGTTCCCACA--------------------------------------------CC-CTTA----CTTTC--TATC-------CTCCCAA------------------G---------------------------------------------------------------------------------------------------AAC--------------------------------------------CTTT--CCTTATTTCT-TTTCGT-TTGAGTTCTGTATTG---------TT------TTTATTTACT-TGCC-----C--------------------------------------------------A---CGTTTTTAGCAGTATTTCTAACTGAACAGTT-------TTCGGGATTATTGTTTTCAGTTTTCCT----TAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGTTTTAGTTAA------CC-TCTTTCGTTGGCCCTAGGAATTGT--TTGCTTGTCTA--ATGTA
droKik1 scf7180000301710:64079-64315 + AGTCGACGCTGACCAAGCGCGGATGCCACTTCAAGTCCTCTGGCTATCGGGTGAGTCTCCAGT------------------------------------TCC-----CA-CT-A----CTTCC--TATTCCAAGTCTTTCGAA------------------G---------------------------------------------------------------------------------------------------AAG--------------------------------------------CTATACCCTTCCGTT-----------------------------------------TTTATTGGTT--TCC-----CCTTTGTTTTGTTT-------------------ATTTTTATTGTTATTATTT---T--CTGTAGCCACTTTGCTAACTGAATAGTTGTTGTTTTCGGGGACGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-ATGTTTTTC--TTTGACCTGAATGT-------------------AGT--GTGTA
droAna3 scaffold_13337:24567-24795 - AGTCTACTCTCACAAAACGCGGATGTCATTTTAAGTCATCGGGGTACCGGGTGAGTGACAAGA--------------------------------------------TT-TT-TT---AAT----GGCA-------CATAAAATATGTATCTTTTCTTAGAG---------------------------------------------------------------------------------------------------AAT--------------------------------------------CTTT--ATT----TGT---------------------TGTATTTGTTAAT------ATTATTTGTT-TAAC-----C--------------------------------------------------CTAACATGTGTAATCTTTGATCTAACAAAATACTT-------AGGGACATTATAATTTCTA----TACTTTTGTACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----TG--------------------TTTTCCATACCCTT-----------------------------
droBip1 scf7180000395155:730018-730318 + AGTCTACCCTCACAAAACGCGGATGTCACTTCAAGTCATCTGGGTACCGGGTGAGTTACAAGA--------------------------------------------CA-TT-TA--TCTTT---------------------------------------G---------------------------------------------------------------------------------------------------AAT--------------------------------------------CT-------------------------ATATGTTTGTTGCCCTTGCTAGT------ATTATTTGTT-TAAC-----C--------------------------------------------------CTAACATGCGTAGCCGTTGTTCTAACAAAAAACTT-------AGGGATATTATCATTTTTG---TTAATT--------------------------------------------------------------------------------------------------------------------------------------------T-TATTTTCGTTTTGCATACTGTGCCAAGTAGGGGAGTACCACCCGACCCTATTTCTTACCAGGGCAATGCAGCCTCGACCTTTATTTTT-----GGTTTTAT---------------TTTACTTGTAGCTAGTAGCTAT--AT------CC--------
dp5 XR_group3a:1074466-1074726 + AGTCCACACTGACAAAGCGCGGATGTCACTTCAAGTCCTCCGGCTACCGGGTGAGTTTCCCAA--------------------------------------------TCCTT-GC----TCTC--AATCCTAG-------------------------------------------------------------------------------------------CTCCA---CCTCGA--------------------------G--------------------------------------CTGAGATTT--CTCTCTGTCGCTCTCTC-T----------------------------------------CTCTCCCAGTGAGCCTCTCTGGTTCTTTCTT--TCAGTTTCTTCAT--------TTACCA--T---T--ATGTAGCAGTAGAGCTAACTGTACTTCT-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-----GGTTGTATTTTG------TG-TATTTCCTTGGGGCTAAGCGGTCT--TTTATGGGCTGTTGTACG
droPer2 scaffold_23:1101972-1102232 + AGTCCACACTGACAAAGCGCGGATGTCACTTCAAGTCCTCCGGCTACCGGGTGAGTTTCCCAA--------------------------------------------TCCTT-GC----TCTC--AATCCTAG-------------------------------------------------------------------------------------------CTCCA---CCTCGA--------------------------G--------------------------------------CTGAGATTT--CTCTCTGTCGCTCTCTC-T----------------------------------------CTCTCCCAGTGAGCCTCTCTGGTTCTTTCTT--TCAGTTTCTTCAT--------TTACCA--T---T--ATGTAGCAGTAGAGCTAACTGTACTTCT-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-----GGTTGTATTTTG------TG-TATTTCCTTGGGGCTAAGCGGTCT--TTTATGGGCTGTTGTACG
droWil2 scf2_1100000004540:492244-492581 + AATCCACATTGACCAAACGTGGTTGCCATTTCAAATCTTCTGGCTATCGGGTAAGCATCCAAAAAAGCCATTTAAAATTATTTGTAACTTAAGCCAAAGTGTCATAATT---------TCTAGTCGACG-------TTTTGTA------------------GAAACGACCCCTCTTAAAAAAAAAAAAAAAAAAACCCAG------------------------ACCTA---TTTTTA--------------------------T--------------------------------------TTAA----------------------TG-TTAATTTTTG--------------TT------TCCTTTTTTT-TTTT-----G--------------------------------------------------T---T--TTGTAGTCTGAACTCTAACTATTTAGCT-------TGGTC-TTTATTC-----------------------------------------------------------------------------------------------------------TTCTCGAATTTCTGTCTGGGGTCGTAGGACTAACCTTTTGT-GTGT--G-TGTG---------------------------------------------------------------------------------TGTG-----------------------T-GTTTTGGTTGGTTTTTTTTGTTGT--T------------TTTTT
droVir3 scaffold_13049:3106091-3106391 - dvi_18146 AGTCTACCCTAACCAAGCGTGGCTGCCACTTCAAGTCCTCCGGCTATCGGGTGAGTTTTGTCA--------------------------------------------A-----------------GGCA-------AAAAAA------------------------------------------AAAAAAAATAACGTGTATTTTTACTGCCAAGTTC---------CCCCAAACGTTGCC---CGTGTAGTCTAGTGT--------GCGACGTTTCCGTAGTGTAT----TCCAGCACGGTT-----TATC--TTTTATTTATATTTTAT-TTTAGTTTTTTTTTT---------AT------TTTA-------------------------------------------------------------------------------------------------TATTT-------TATACGATT-TGGTTACGAGTTTTGGT----TTGTTTTTGGTT------------------------------ACAAGTAGAGC--TG---CTAACACCTAGA---TTTGTTCTGTCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT--TTGTG
droMoj3 scaffold_6654:856134-856371 + AGTCGACCCTGACCAAGCGCGGATGCCACTTCAAGTCCTCCGGCTACCGGGTAAGCCTCAAGC--------------------------------------------AC-TG-AC----TCTC--AACT---------------------------------------------------------------------------------------CAACTCAACTCAA---CTCCGAGTCCT----GTAGCATAGTG---TAG--------------------------------------------TAGT--CCTTAGTTTGGTT--------------------------------------------------CC-----C---------------TTTTGA------------------------------------------------------------------------------------------------GT----TTGTTTTTGGTT------------------------------TC--GTAG--CTTTCTTTCTAACACTTAGCGAATTCGT-TTGTCCGGTTCGTGACGT----GCTGGGGCAGTAG-ACTAACC----------------------------------------------------------GA--------------------------------------TCTTT-----GGTT-------------------------------------------------------------
droGri2 scaffold_15110:4041065-4041400 - AGTCGACGCTGACCAAACGTGGCTGCCACTTCAAGTCGTCCGGCTACCGGGTGAGTTGCGACT--------------------------------------------A-------------------CA-------CT-TAGA------------------G------------------A---AA-----------------CTGACCACCTAGTACACTAAGCTCTG---AACGGTGCCATGTGTGTAGTGTAGTGTGA---ATTGCGACGTTTCTGTAGTGTTTATTGCCTAGCACTCAT------TTT--CTTTACT------TTTA-TTGTGTTTTGTTTTG---------TT------------TGGT-TTTG-----CTTTTGTTTGGTTCTGTTTTGA------------------------------------------------------------------------------------------------TT----TTGTT--TGGTTTTGTTATTGTTAAATGGTTGATTTTGGTTGATTCGTAGTGCTCTGCTAATAACAATTAGAG--TTTG--TTGTCCGT-------CTT-----------------------------------------------------------------------------------------------------------------------------TTT-----G---------------------------------------------------GGGAAGTTGGGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGTCCACGCTGACTAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTGTCCGCT--------------------------------------------CT-TT-GT--TCCTCC--TATC-------CTTGAGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTCCTTTGTTTTTTC-TTAAGTTGTGTGTTG---------CT---CTTTTTATTTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCACATTTCTAACCGAATAGTT-------TTGGG-ATTATGA------ATTGTGTT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGTTTTAA-T-------AAT-TTTTTCGTTGGCCCTAGGAGTTAT--TT------CTA--ATGTASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
No Reads
droSec2
AGTCCACGCTGACTAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTGTCCGCT--------------------------------------------CT-TT-GT--TCCTCC--TATC-------CTTGAGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTCCTTTGATTTTTC-TTAAGTTGTGTGTTG---------CT---CTTTTTATTTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCACATTTCTAACCGATCAGTT-------TTGGG-ATTATGA------ATTGTATT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGTTTTAATT-------AAT-TTTTTCGTTGGCCCTAGGAGTTAC--TT------CTA--ATGTASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
No Reads
dm3
AGTCCACGCTGACCAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTTTCCACT--------------------------------------------CT-GT-GT--TCCTCC--TATC-------CTTGAGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTCCTTTGTTTTTTC-TTTATTTGTGTGTTG---------CT---CTTTTTATTTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCACATTTCTAACCGAATAGTT-------TTGGG-ATTATAA------ATTGTGTT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGTTTTAATT-------AAT-TTTTTCGTTGGCCCTAGGAGTTAT--TT------CTA--ATGTASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAA------ATTGTGTT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGT..............................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------TTGGG-ATTATAA------ATTGTGTT----TTG......................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCGTTGGCCCTAGGAGTTAT--..................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-----GGTTTTAATT-------AAT-TTTTTCGTTGG.................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCACATT..............................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCGTTGGCCCTAGGAGTTAT--T.................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------TTGGG-ATTATAA------ATTGTG...............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGGCTATCGGGTGAGTTTCCACT--------------------------------------------CT-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................TCCACT--------------------------------------------CT-GT-GT--TCCTCC--TATC-------CTTGAGA------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGTCCACGCTGACCAAGCGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATTTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGT....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCGTTGGCCCTAGGAG........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCACA................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGTTTT...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TGTGTGTTG---------CT---CTTTTTATTTGTG-T.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-------TTGGG-ATTATAA------ATTGTG...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................T---CTTTTTATTTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGT....................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCA..................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----GGTTTTAATT-------AAT-TTTTTCGTTGGC................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTC...................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA------ATTGTGTT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GG...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCACATT..............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTTTTCGTTGGCCCTAGGAGTTAT--..................2511.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----GGTTTTAATT-------AAT-TTTT........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTTTTCGTTGGCCCTAGGAG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTAACCGAATAGTT-------TTG.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------TTGGG-ATTATAA------ATTGTGTT----TTGT.....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................GTTTCCACT--------------------------------------------CT-GT-GT--TCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-----GGTTTTAATT-------AAT-TTTTTCGTTG..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TC-TTTATTTGTGTGTTG---------CT---CTTTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAA------ATTGTGTT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GG...............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................TATC-------CTTGAGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCGTTGGCCCTAGGAGTT......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TGTGTGTTG---------CT---CTTTTTATTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AATCCTCAGGCTATCGGGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCAAATCCTCAGGCTATCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----GGTTTTAATT-------AAT-TTTTTCGTTGG.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GTTG---------CT---CTTTTTATTTGTG-TT............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGTTGGCCCTAGGAGTTAT--T.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------AAT-TTTTTCGTTGGCCCTAGGAGT.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................ACTTCAAATCCTCAGGCTATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACCGAATAGTT-------TTGGG-ATTAT.............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTATTTGTG-TTCG-----C--------------------------------------------------T---C--TTGTAGTCACA................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------AAT-TTTTTCGTTGGCCCTAGGAGT.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA------ATTGTGTT----TTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGTT.............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ACGCTGACCAAGCGCGGCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................TGTCACTTCAAATCCTCAGGCTATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCCTAGGAGTTAT--TT------CTA--ATG..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------TTGGG-ATTATAA------ATTGTGTT----TTG......................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................C-------CTTGAGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTCCTTTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGTCACTTCAAATCCTCAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TTTTC-TTTATTTGTGTGTTG---------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TG---------CT---CTTTTTATTTGTG-TTCG-----.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droEre2
AGTCCACGCTGACTAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTTTCCACT--------------------------------------------CT-TG-GTTCTGCTGC--TATC-------CTTGCGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTCCTTTGTTTTGCC-TTAAGTTGTGTATTG---------CT---CT-TTTATTTGTG-TTCC-----C--------------------------------------------------T---C--TTGTAGTCGCATTTCTAACCGAATAGTT-------TTGGG-ATTTTGA-----------------------------------------------------------------------------------------------------------CTTATGAATTATGAAT----------------------TAT-GTGTTTTGTT----------------------------------------------------------------------------------TTTT-----GGTTCTAATT-------AAT-TTTTTGGTTGGCCCTAGGAGTTAT--TT------CTA--ATGTASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
No Reads
droYak3
AGTCCACGCTGACTAAGCGCGGCTGTCACTTCAAATCCTCAGGCTATCGGGTGAGTTTCCACA--------------------------------------------CT-CCTCT-CTGCTGC--TATC-------CTTGCGA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTACTTTGTTT-TCC-CTAAGTTGTGTATTG---------CT---CTTTTTGTTTGTG-TTCC-----C--------------------------------------------------T---C--TTGTAGTCACATTTCTAACCGAATAGTT-------TTGGG-ATTATGC-----------------------------------------------------------------------------------------------------------GTTGTGAATTATGTTT----------------------TGTTTTGTTTTGTT----------------------------------------------------------------------------------TTTT-----GGTTCTAATT-------AAT-TTTTTCGTTGGCCCTAGGAGTTAT--TT------CTA--ATGTASizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTTTTGTT----------------------------------------------------------------------------------TTTT-----GGTTC............................................................2120.50110000000000
droEug1
AGTCCACTCTGACCAAGCGCGGCTGTCACTTCAAGTCCTCTGGCTATCGGGTGAGTGTCCATG--------------------------------------------CA-CT-T---TCTTGC--TATC-------ATCCAAA-----------------------------------------------------------------------------------------------------------------------GA--------------------------------------------CTAT--CCTTACTTTCGTTTCTCTTCGAGTTTCGTATTG---------TTTGACTTTTGACCTAAG-TTGC-----C--------------------------------------------------C---T--TTGTAGTCACATTGCTAACTGAACAGTT-------TTGGGGATATTGGGT-----TTGTGTTT--------------------------------------------------------------------------------------------------------------------------------------------C-TGT---------------------------------------------------------------------------------TTTT-----GGT-TTGTTT-------AAC-TCTTGAGTTGGCCCTAGGACTTGT--TT------GTT--ATGTASizeHit CountTotal NormTotal
No Reads
droBia1
AGTCCACGTTGACGAAACGCGGGTGCCACTTCAAATCCTCAGGCTATCGGGTGAGTTTTCAGA--------------------------------------------CC-TT-TT--CGTTGC--TGTC-------CACCA-A------------------C---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTTT--CTTTGTTTTTATTCCAC-CTAAGTTCTGTAATG---------TT---TT-GTTATGT-TG-TTGC------------------------------------------------------------C--CCGTAGACATATTTCTAACTGAATAGTT-------TTGGGGATTGTGATTTGTA----TGTTC--------------------------------------------------------------------------------------------------------------------------------------------T-TAT----------------------------------------------------------------------------------TTC-----CGTTTTATTT-------AAT-CTTTTCGTTGGCCCTAGGAGTTGT--TT------CTA--ATGTASizeHit CountTotal NormTotal
No Reads
droTak1
AGTCCACTTTGACCAAACGCGGCTGTCACTTCAAATCTTCAGGCTATCGGGTGAGTTTTCAAA--------------------------------------------ACCTT-CT-TTCTTGC--TATC-------CACAAAA------------------G---------------------------------------------------------------------------------------------------AGA--------------------------------------------CTAT--CCTTATTTTTATTTTTC-GTAAGTTTTGTATGA---------TT-----------------------------------------------------------------------------T---T--TTGTAGTCAT-TTTCTAACTGAATAGAT-----TTTTGGGGATTGTGTTTGTTA----TATTT--------------------------------------------------------------------------------------------------------------------------------------------T-TAT----------------------------------------------------------------------------------TTC-----CGTTTTATTTTA------CCTTTTTTCGTTGGCCCTAGGAGTTGT--TT------CTA--ATGTASizeHit CountTotal NormTotal
No Reads
droEle1
AGTCTACACTGACCAAACGCGGCTGTCACTTCAAATCCTCTGGCTATCGGGTGAGTTTGCCAA--------------------------------------------TC-TT-A---TCTTTC--TATC-------CTCCAAT------------------C---------------------------------------------------------------------------------------------------AAA---------------------------------------CTA--CTAT--CCTTATTTGTACTTTTCTTTAAGTTTTGTATTG---------TT------TTTATTTGTT-CTCC-----C--------------------------------------------------C---C--TCGTAGAAATATTTCTAACTGAATAGTT-------TTGGGGATTATTTTTTT-----CTGTTT--------------------------------------------------------------------------------------------------------------------------------------------C-TGTT---------------------------------------------------------------------------------TTTGTTTTGATTTTATTA-------AAC-TTTTTCGTTGGCCCTAGGAGTTGCTTTT------TTA--ATGAASizeHit CountTotal NormTotal
No Reads
droRho1
AGTCCACACTGACCAAACGCGGCTGTCATTTCAAGTCCTCCGGCTATCGGGTGAGTTTTCACA--------------------------------------------AC-TT-GT--TTGTTC--TACC-------CTCCAAA------------------G---------------------------------------------------------------------------------------------------AAA--------------------------------------------CTAT--CCTTATTTGAATTTTTATTTAAGTTTTGTATTG---------AT------TTGATTTGGT-TTCC-----C--------------------------------------------------C---T--TCGTAGCCATTTTTCTAACTGAATAGTT-------CTGGGTATTATTATTTTTC----TGTTT--------------------------------------------------------------------------------------------------------------------------------------------T-TGT----------------------------------------------------------------------------------TTT-----GGTTTTATTT-------AAC-TTTTTCGTTGGCCTTAGGAGTTGT--TT------CTA--ATGTASizeHit CountTotal NormTotal
No Reads
droFic1
AGTCCACGCTGACCAAACGCGGCTGTCACTTCAAGTCCTCCGGCTATCGGGTGAGTTCCCACA--------------------------------------------CC-CTTA----CTTTC--TATC-------CTCCCAA------------------G---------------------------------------------------------------------------------------------------AAC--------------------------------------------CTTT--CCTTATTTCT-TTTCGT-TTGAGTTCTGTATTG---------TT------TTTATTTACT-TGCC-----C--------------------------------------------------A---CGTTTTTAGCAGTATTTCTAACTGAACAGTT-------TTCGGGATTATTGTTTTCAGTTTTCCT----TAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----GGTTTTAGTTAA------CC-TCTTTCGTTGGCCCTAGGAATTGT--TTGCTTGTCTA--ATGTASizeHit CountTotal NormTotal
No Reads
droKik1
AGTCGACGCTGACCAAGCGCGGATGCCACTTCAAGTCCTCTGGCTATCGGGTGAGTCTCCAGT------------------------------------TCC-----CA-CT-A----CTTCC--TATTCCAAGTCTTTCGAA------------------G---------------------------------------------------------------------------------------------------AAG--------------------------------------------CTATACCCTTCCGTT-----------------------------------------TTTATTGGTT--TCC-----CCTTTGTTTTGTTT-------------------ATTTTTATTGTTATTATTT---T--CTGTAGCCACTTTGCTAACTGAATAGTTGTTGTTTTCGGGGACGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-ATGTTTTTC--TTTGACCTGAATGT-------------------AGT--GTGTASizeHit CountTotal NormTotal
No Reads
droAna3
AGTCTACTCTCACAAAACGCGGATGTCATTTTAAGTCATCGGGGTACCGGGTGAGTGACAAGA--------------------------------------------TT-TT-TT---AAT----GGCA-------CATAAAATATGTATCTTTTCTTAGAG---------------------------------------------------------------------------------------------------AAT--------------------------------------------CTTT--ATT----TGT---------------------TGTATTTGTTAAT------ATTATTTGTT-TAAC-----C--------------------------------------------------CTAACATGTGTAATCTTTGATCTAACAAAATACTT-------AGGGACATTATAATTTCTA----TACTTTTGTACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----TG--------------------TTTTCCATACCCTT-----------------------------SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
No Reads
droBip1
AGTCTACCCTCACAAAACGCGGATGTCACTTCAAGTCATCTGGGTACCGGGTGAGTTACAAGA--------------------------------------------CA-TT-TA--TCTTT---------------------------------------G---------------------------------------------------------------------------------------------------AAT--------------------------------------------CT-------------------------ATATGTTTGTTGCCCTTGCTAGT------ATTATTTGTT-TAAC-----C--------------------------------------------------CTAACATGCGTAGCCGTTGTTCTAACAAAAAACTT-------AGGGATATTATCATTTTTG---TTAATT--------------------------------------------------------------------------------------------------------------------------------------------T-TATTTTCGTTTTGCATACTGTGCCAAGTAGGGGAGTACCACCCGACCCTATTTCTTACCAGGGCAATGCAGCCTCGACCTTTATTTTT-----GGTTTTAT---------------TTTACTTGTAGCTAGTAGCTAT--AT------CC--------SizeHit CountTotal NormTotal
No Reads
dp5
AGTCCACACTGACAAAGCGCGGATGTCACTTCAAGTCCTCCGGCTACCGGGTGAGTTTCCCAA--------------------------------------------TCCTT-GC----TCTC--AATCCTAG-------------------------------------------------------------------------------------------CTCCA---CCTCGA--------------------------G--------------------------------------CTGAGATTT--CTCTCTGTCGCTCTCTC-T----------------------------------------CTCTCCCAGTGAGCCTCTCTGGTTCTTTCTT--TCAGTTTCTTCAT--------TTACCA--T---T--ATGTAGCAGTAGAGCTAACTGTACTTCT-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-----GGTTGTATTTTG------TG-TATTTCCTTGGGGCTAAGCGGTCT--TTTATGGGCTGTTGTACGSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
...CCACACTGACAAAGCGCGGATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
AGTCCACACTGACAAAGCGCGGATGTCACTTCAAGTCCTCCGGCTACCGGGTGAGTTTCCCAA--------------------------------------------TCCTT-GC----TCTC--AATCCTAG-------------------------------------------------------------------------------------------CTCCA---CCTCGA--------------------------G--------------------------------------CTGAGATTT--CTCTCTGTCGCTCTCTC-T----------------------------------------CTCTCCCAGTGAGCCTCTCTGGTTCTTTCTT--TCAGTTTCTTCAT--------TTACCA--T---T--ATGTAGCAGTAGAGCTAACTGTACTTCT-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-----GGTTGTATTTTG------TG-TATTTCCTTGGGGCTAAGCGGTCT--TTTATGGGCTGTTGTACGSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
No Reads
droWil2
AATCCACATTGACCAAACGTGGTTGCCATTTCAAATCTTCTGGCTATCGGGTAAGCATCCAAAAAAGCCATTTAAAATTATTTGTAACTTAAGCCAAAGTGTCATAATT---------TCTAGTCGACG-------TTTTGTA------------------GAAACGACCCCTCTTAAAAAAAAAAAAAAAAAAACCCAG------------------------ACCTA---TTTTTA--------------------------T--------------------------------------TTAA----------------------TG-TTAATTTTTG--------------TT------TCCTTTTTTT-TTTT-----G--------------------------------------------------T---T--TTGTAGTCTGAACTCTAACTATTTAGCT-------TGGTC-TTTATTC-----------------------------------------------------------------------------------------------------------TTCTCGAATTTCTGTCTGGGGTCGTAGGACTAACCTTTTGT-GTGT--G-TGTG---------------------------------------------------------------------------------TGTG-----------------------T-GTTTTGGTTGGTTTTTTTTGTTGT--T------------TTTTTSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGGGTCGTAGGACTG................................................................................................................................................................................1811.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TGTG---------------------------------------------------------------------------------TGTG-----------------------T-GTTTTGGT....................................18200.10202000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT--G-TGTG---------------------------------------------------------------------------------TGTG-----------------------T-GTTTTGG.....................................21200.05101000
droVir3
AGTCTACCCTAACCAAGCGTGGCTGCCACTTCAAGTCCTCCGGCTATCGGGTGAGTTTTGTCA--------------------------------------------A-----------------GGCA-------AAAAAA------------------------------------------AAAAAAAATAACGTGTATTTTTACTGCCAAGTTC---------CCCCAAACGTTGCC---CGTGTAGTCTAGTGT--------GCGACGTTTCCGTAGTGTAT----TCCAGCACGGTT-----TATC--TTTTATTTATATTTTAT-TTTAGTTTTTTTTTT---------AT------TTTA-------------------------------------------------------------------------------------------------TATTT-------TATACGATT-TGGTTACGAGTTTTGGT----TTGTTTTTGGTT------------------------------ACAAGTAGAGC--TG---CTAACACCTAGA---TTTGTTCTGTCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT--TTGTGSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
No Reads
droMoj3
AGTCGACCCTGACCAAGCGCGGATGCCACTTCAAGTCCTCCGGCTACCGGGTAAGCCTCAAGC--------------------------------------------AC-TG-AC----TCTC--AACT---------------------------------------------------------------------------------------CAACTCAACTCAA---CTCCGAGTCCT----GTAGCATAGTG---TAG--------------------------------------------TAGT--CCTTAGTTTGGTT--------------------------------------------------CC-----C---------------TTTTGA------------------------------------------------------------------------------------------------GT----TTGTTTTTGGTT------------------------------TC--GTAG--CTTTCTTTCTAACACTTAGCGAATTCGT-TTGTCCGGTTCGTGACGT----GCTGGGGCAGTAG-ACTAACC----------------------------------------------------------GA--------------------------------------TCTTT-----GGTT-------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
.............................................................................................................................................................................................................................................................TAGTG---TAG--------------------------------------------TAGT--CCTTAGTTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................GTAAGCCTCAAGC--------------------------------------------AC-TG-AC----TCTC--AAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
droGri2
AGTCGACGCTGACCAAACGTGGCTGCCACTTCAAGTCGTCCGGCTACCGGGTGAGTTGCGACT--------------------------------------------A-------------------CA-------CT-TAGA------------------G------------------A---AA-----------------CTGACCACCTAGTACACTAAGCTCTG---AACGGTGCCATGTGTGTAGTGTAGTGTGA---ATTGCGACGTTTCTGTAGTGTTTATTGCCTAGCACTCAT------TTT--CTTTACT------TTTA-TTGTGTTTTGTTTTG---------TT------------TGGT-TTTG-----CTTTTGTTTGGTTCTGTTTTGA------------------------------------------------------------------------------------------------TT----TTGTT--TGGTTTTGTTATTGTTAAATGGTTGATTTTGGTTGATTCGTAGTGCTCTGCTAATAACAATTAGAG--TTTG--TTGTCCGT-------CTT-----------------------------------------------------------------------------------------------------------------------------TTT-----G---------------------------------------------------GGGAAGTTGGGTGSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads

Generated: 05/19/2015 at 01:17 AM