ID:

dsi_15356

 Coordinate:

3l:4774466-4774661 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.8 -11.8 -11.8 -11.5

Flybase annnotation

Antisense to exon [3l_4774650_4777735_-]; Antisense to CDS [3l_4774650_4777735_-]; three_prime_UTR [3l_4774265_4774597_+]; exon [3l_4773779_4774597_+]

No Repeatable elements found

Sense Strand Reads

######################################################################################################################################################################################------------------------------------------------------------------------------------------------------------------
CCGCCCAAATGCATTTCCGGTGTTGGCCAGAAAGGCGCCATCCTAGATTGGTACTTTTTAATCATGTTTAATGTTAAATATTTATAAAAATTGGACTAGTTGTAAGCAGCTGCTTTACAGGATTGGTAAATGCCTAGAATCATAGGAATATAATGGTTGCTCTACCTGTGCGCCTCTATCTAAAAGCCAGATCGACTAATAATTTCATAATTTTTCATTTGTTGGAACGGCCTCTCACTTCAACAGCTCGCACATGAGATTCCGCAGGTAGACATCTAGCTGGGCGTAATCCAGCA
************************************************************************************.......((..((.(((.((.(((..((((..........))))..))).)).)))...))...))************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M053
female body
 SRR902009
testis
 M023
head
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 GSM343915
embryo
....................................................................................TAAAAATTGGACTAGTTGTAAGCAGC.......................................................................................................................................................................................... 26 0 1 11.00 11 9 1 0 0 0 1 0 0 0 0 0
..................................................................................TATAAAAATTGGACTAGTTGTAAGCAGC.......................................................................................................................................................................................... 28 0 1 6.00 6 3 2 0 0 0 0 0 0 1 0 0
..................................................................................TATAAAAATTGGACTAGTTGTAAGC............................................................................................................................................................................................. 25 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0
..........................................................................................TTGGACTAGTTGTAAGCAGCTGCTT..................................................................................................................................................................................... 25 0 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................TGGTAAATGCCTAGAATCATAGGAATA.................................................................................................................................................. 27 0 1 3.00 3 1 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................TTGGTAAATGCCTAGAATCATAGGAATA.................................................................................................................................................. 28 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0
..........................................................................................TTGGACTAGTTGTAAGCAGCTGCTTT.................................................................................................................................................................................... 26 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0
................................................................................TTTATAAAAATTGGACTAGTTGTAAGCAGC.......................................................................................................................................................................................... 30 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................ATAAAAATTGGACTAGTTGTAAGCAGC.......................................................................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
................................................................................TTTATAAAAATTGGACTAGTTGTAAGC............................................................................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCTACCTGTGCGCCTCTATCTAAAAGC............................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................TTATAAAAATTGGACTAGTTGTAAGC............................................................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................TTTATAAAAATTGGACTAGTTGTAAGCA............................................................................................................................................................................................ 28 0 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0
....................................................................................TAAAAATTGGACTAGTTGTAAGCAG........................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
..................................................GTACTAGTTAATCATGTTTG.................................................................................................................................................................................................................................. 20 3 2 1.50 3 0 0 0 0 3 0 0 0 0 0 0
................................................................................................TAGTTGTAAGCAGCTGCTTTACAGGAT............................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................TTATAAAAATTGGACTAGTTGTAAGCAGC.......................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................TATTTATAAAAATTGGACTAGTTGT................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCTACCTGTGCGCCTCTATCT................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................TAAAAGTTGGACTAGTTGTAAGCAGC.......................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................AATTGGACTAGTTGTAAGCAGCTGCT...................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................TAGAATCATAGGAATATAATGGTTGC........................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAAAATTGGACTAGTTGTAAGCAGC.......................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................AAATATTTATAAAAATTGGACTAGTTGT................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................TATAAAAATTGGACTAGTTGTAAGCAG........................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TTACAGGATTGGTAAATGCCTAGAA............................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................TTTATAAAAATTGGACTAGTTGTAT............................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................TTGGTAAATGCCTAGAATCATAGGA..................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................TGGACTAGTTGTAAGCAGCTGCTTTA................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................TTTAATGTTAAATATTTATAAAAATTGGAC........................................................................................................................................................................................................ 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GATTGGTAAATGCCTAGAATCATAGGAA.................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................TAAGCAGCTGCTTTACAGGATTGGTAAA...................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................TATAATGGTTGCTCTACCTGTGCGCC.......................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................TTATAAAAATTGGACTAGTTGTAAGCA............................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTGGACTAGTTGTAAGCAGC.......................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................TTGGACTAGTTGTAAGCAGCTGC....................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGTGCGCCTCTATCTAAAAA.............................................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.CGCCGAAATGCATTTCCGGTGTTGGC............................................................................................................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................AATTGGACTAGTTGTAAGCAGCTGC....................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................TGGACTAGTTGTAAGCAGCTGCTTT.................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................TGGACTAGTTGTAAGCAGCTGCT...................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................AAATTGGACTAGTTGTAAGCAGC.......................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................TACAGGATTGGTAAATGCCTAGAATCA.......................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................AAAAATTGGACTAGTTGTAAGCAGCTGC....................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................GTACTAGTTAATCATGTTTGA................................................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................GATCGCACGTAAGATTCCG................................ 19 3 5 0.40 2 0 0 0 0 0 0 1 1 0 0 0
..................................................GTACTAGTTAATCATGTT.................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................GATTTCTAAAAATTGGACTAA..................................................................................................................................................................................................... 21 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................AGAATCATACGAATA.................................................................................................................................................. 15 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
...................................................TACTAGTTAATCATGTTTGA................................................................................................................................................................................................................................. 20 3 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................ATAGGAATACCATGGTTGC........................................................................................................................................ 19 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1
................................................................................................................................................................................TATCTAAAAGTCAGA......................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##############################################################
GGCGGGTTTACGTAAAGGCCACAACCGGTCTTTCCGCGGTAGGATCTAACCATGAAAAATTAGTACAAATTACAATTTATAAATATTTTTAACCTGATCAACATTCGTCGACGAAATGTCCTAACCATTTACGGATCTTAGTATCCTTATATTACCAACGAGATGGACACGCGGAGATAGATTTTCGGTCTAGCTGATTATTAAAGTATTAAAAAGTAAACAACCTTGCCGGAGAGTGAAGTTGTCGAGCGTGTACTCTAAGGCGTCCATCTGTAGATCGACCCGCATTAGGTCGT
**************************************************************************************************************************************************.......((..((.(((.((.(((..((((..........))))..))).)).)))...))...))************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body
...............................................................................................................................................................................................................................................................CTCTAAGGCGTCCAGC......................... 16 1 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................AGCGTGTACTATGAGCCGT.............................. 19 3 14 0.36 5 0 0 5 0 0 0
.............................................................................................................................................................................................................................................TAAGTTGTCGAGCGTGT.......................................... 17 1 3 0.33 1 0 1 0 0 0 0
..........................................................................................................................................................................................................................................AGTGAAGTTTTGGAGCGT............................................ 18 2 4 0.25 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................GGCGTCAATCTGTAGGTAGA............... 20 3 5 0.20 1 0 0 0 0 1 0
...................................................................................................................................................................................................................................................................AAGGCGTCCATCCGT...................... 15 1 5 0.20 1 0 0 0 1 0 0
......................................................................................................................................................................................................................................................GAGCGTGTACTATGAGCCGT.............................. 20 3 6 0.17 1 0 0 1 0 0 0
..........................................................................................................GGCGGCGAAATGTCCTAA............................................................................................................................................................................ 18 2 6 0.17 1 1 0 0 0 0 0
.........................................................................................................................................................................................CCGTGTAGCTGATTATGAA............................................................................................ 19 3 9 0.11 1 0 0 0 0 0 1
.................................................................................................................................................................................................................................................................................TCGATCGGCCCGCATCAGG.... 19 3 11 0.09 1 1 0 0 0 0 0
..........................................................................................................................................................GCAACGAGATGGATACG............................................................................................................................. 17 2 17 0.06 1 1 0 0 0 0 0
.......................................................................................................TACGTCGACGAAATG.................................................................................................................................................................................. 15 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................TGGCGGCGAAATGTCCTAA............................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................CCGAGGCGTCCATCTG....................... 16 2 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:4774416-4774711 + dsi_15356 CCGCCCAAATGCATTTCCGGTGTTGGCCAGAAAGGCGCCATCCTAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCAG--ATCGACTAATAATTT-----------------------------------------------------------------CATAATTT-------TTCATTTGTTG---GAA---------------------------------------------------------------------------------CGGCCTCTCACTTCAACAGCTCGCACATGAGATTCCGCAGGTAGACATCTAGCTGGGCGTAATCCAGCA
droSec2 scaffold_2:4815238-4815533 + CCGCCCAAATGCATTTCCGGTGTTGGCCAGAAAGGCGCCATCCTAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GA------------------------------TAAATGCCTAGAATCA-----TAGGAAAAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCAG--ATCGACTAATAATTT-----------------------------------------------------------------CATAATTT-------TTCATTTGTTG---GAA---------------------------------------------------------------------------------CGGCATCTCACTTCAACAGCTCGCACATGAGATTCCGCAGGTAGACATCTAGCTGGGCGTAATCCAGCA
dm3 chr3L:4828858-4829153 + CTGCCCAAATGCATTTCCGGTGTTGGCCAGAAAGGCGCCATCCTAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCAG--ATCGACTAATAATTT-----------------------------------------------------------------CATAAATT-------TTCATTTGTTG---GAA---------------------------------------------------------------------------------CGGCCTCTCACTTCAACAGCTCGCACATGAGATTCCGCAGGTAGACATCTAGCTGGGCGTAATCCAGCA
droEre2 scaffold_4784:7547360-7547665 + CCGCCCAAATGCATTTTCGGTGTTTGCCAGAAGGACGCCATCCTAGATTGGTACC--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCAG--ATCGACTAATAATTT-----------------------------------------------------------------CTTCATTT-------TTCTTTTGTTG---GTACT----------------------TCATC-----------------------------ACT--------------------CATCAGCTCACTTCATCAGCTCGCACATGAGATTCCGCAGGTAGACATCCAGCTGGGCGTAGTCCAGCA
droYak3 3L:5412564-5412862 + CCTCCCAAATGCATTTCCGGTGTGGGCCAGAAAGACGCCATCCTAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCAG--ATCGACTAATAATTT-----------------------------------------------------------------CTTCATTT-------TTCTTTTGTTGTTGAAA---------------------------------------------------------------------------------CGGCCCCTCACTTCATCAACTCGCACATGAGATTCCGCAGGTAGACATCTAGCTGGGCGTAATCCAGCA
droEug1 scf7180000409466:2612491-2612786 + CCGCCCAAATGCATTTCCGGTGTTGGCCACAAAGACGCCATCCTAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----CTGTGCGCCTCT-ATCTAAA---AGCCAG--TTCGACTAATAAGTT-----------------------------------------------------------------CTCGTTTT-------ATCTTTCTTTG---GAA---------------------------------------------------------------------------------CGGCTCTTCACTTCATCAGTTCGCACATGAGATTCCGCAGGTAGACATCCAACTGGGCGTAATCCAGCA
droBia1 scf7180000302428:2150509-2150808 - CCGCCCAAATGCATTTCCCGTGTTGGCCAGAAAGACGCCATCCCAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGGATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----CTGTGCGCCTCT-ATCTAAA---AGCCAG--TTCGACTAATAAGTT-----------------------------------------------------------------CTCGTT-T---ATCATTCTCTTGTTT--GGAA---------------------------------------------------------------------------------CGGCTCCTCACTTCATCAGCTCGCACATGAGATTCCGCAGGTAGACATCCAACTGGGTGTAATCCAGCA
droTak1 scf7180000415941:803764-803971 + ---------------------------------------------------------TTTGAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGGATCGT--AGTAGGAATAT---------A--ATGGT-------------------------GCCTCT-ATCTAAA---AGCCAG--TTTGACTAATAAGTT-----------------------------------------------------------------CTTCG-----------------------------------------------------------------------------------------------------------------TTTCATTTCATCAGCTCGCACATGAGGTTCCGCAGGTAGACATCCAACTGGGCGTAATCCAGCA
droEle1 scf7180000491249:5779974-5780275 + --------ATGCATTTCCGGTGTTGGCCAGAAAGACGCCATCCCAGATTGGTAGT--TTTGAGTCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGGATCG-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----CTGTGCGCCGCT-ATCTAAA---AGCCAG--TACGACTAAT----T----------------------------------------------------------CT-CGTTCTCGT-TT---CTCTTTCTCACATG----GGA----------CCACCACCA-------------------------------------------------------------AACGCACCTCACTTCATCAGTTCGCACATGAGATTCCGCAGGTAGACATCCAACTGGGCGTAATCGAGGA
droRho1 scf7180000779364:13466-13761 - CCGCCCAACTGCATTTCCGGTGTTGACCAGAAAGACGCCATTCTAGATTGGTACT--TTTTAATATTGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGGATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----CTGTGCGCCTCT-ATCTAAA---AGCCTG--TACGACTAATAAGTT-----------------------------------------------------------------CTCGTTTT-------ATCTTTTGTTG---GAA---------------------------------------------------------------------------------ACGCACCTTACTTCATCAGCTCGCACATGAGATTCCGCAGATAAACATCCAGCTGGGCGTAATCCAGGA
droFic1 scf7180000454065:737436-737731 - CCGCCCAAATGCATTTTCGGTGTTGGCCTGAAAGTCGCCATCCTAGATTGGTACT--TTTTAATATTGTTTAC------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGGATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----CTGTGCGCCTCT-ATCTAAA---AGCCAG--TACGACTAATAAGTT-----------------------------------------------------------------CTCGTTTT-------ATCTCTCGTTG---GAA---------------------------------------------------------------------------------ACGCACCTCACTTCATCAGCTCGCACATGAGGTTCCGCAGGTAGACATCCAACTGGGCGTAATCGAGCA
droKik1 scf7180000302486:14970-15268 - CCTTCCAAATGCATTTCTGGTGTGGGC-----------CACTCTAGTTTGGTACTCACTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GGTCGCGA----------GGAC-----ACATGTAAATGCCTAGGATCC-----TAGGAATAT---------ATCATGATTTGCT-CTAGTATGT----CAGTGCGTATCT-ATCTAAA---AGCCAGAGTATGACTAATAACTT-----------------------------------------------------------------CTCGC--------------------G---GAA---------------------------------------------------------------------------------CCTCTCCTCACTTCATCAGCTCGCACATGAGGTTGCGCAGGTAGACATCCAACTGGGCGTAATCCAGCA
droAna3 scaffold_13337:2922110-2922425 + CCGCCCAAATGCATTTTCCGTGTTGGCCAGATAAACGGCATCCTAGTTTGGTACT--CTTTAATTATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GGTCACGAG---------GGAC-----AAATGTAAATGCCTAGAATCG-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----TGGTGCACCTCT-ATCTAAAAAAAGCCAG--TATGACTAATAACTT-----------------------------------------------------------------CTTTTTGA-------ATCTCTCGTGG---GAA--------------------------------------------------------------------------------ATGGCCCATCACTTCATTAGCTCGCACATTAGATTTCGCAGATAAACGTCCAGCTGGGCGTAGTCCAGGA
droBip1 scf7180000396378:230236-230551 + CCGCCCGAAGGCATTTTCCGTGATGGCCAGATAAACGGCATCCTAGTTTGGTACT--CTTTAATTATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GGTCACGAA---------GGAC-----AAATGTAAATGCCTAGAATCG-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----TGGTGCACCTCT-ATCTAAAAGAAGCCAC--TATAACTAATAACTT-----------------------------------------------------------------TTCTTTGA-------ATCTCTCGTGG---GAA--------------------------------------------------------------------------------TCGGCCAATCACTTCATTAGCTCGCACATCAGATTTCGCAGGTAAACATCCAGCTGGGCGTAATCCAGGA
dp5 XR_group8:2977107-2977433 + CCGTGGAAATGCATTTCCGT-----------------------TAGATTGGTACT--CTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------TGCC-----TGCGCTTTACAAGATT--GGTCTCTCGCGAGTCTCGGA-----TCGGATGTAAATGCCTAGGATCA-----TTGGAATAT---------ATAACGTT-TGCATGTCGCATGTCGCGGGGTGCTCTTCT-AACTAAA---AGCA-----------AATAAGTCTACGAA------------CTCCACGCGCCC--------------CCTC--GGGGGCCTCT-CCTTCCTGC-CT---CCCTGTC--------------CT-----------------------------------------------------------------------------------CCATCACTTCATCAGCTCGCACATGAGATTCCGCAGGTAGACGTCCAGCTGGGCGTAGTCCAGCA
droPer2 scaffold_24:76031-76363 - CCGTGGAAATGCATTTCCGT-----------------------TAGATTGGTACT--CTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------TGCC-----TGCGCTTTACAAGATT--GGTCTCTCGCGAGTCTCGGA-----TCGGATGTAAATGCCTAGGATCA-----TTGGAATAT---------ATAACGTT-TGCATGTCGCATGTCGCGGGGTGCTCTTCT-AACTAAA---AGCA-----------AATAAGTCTACGAA------------CTCCACGCGCCC--------------CCTC--GGGGGCCTCT-CCTTCCTGC-CA--------------GGAG---GAC-----AGGGACCT------------------------------------------------------------------------CCATCACTTCATCAGCTCGCACATGAGATTCCGCAGGTAGACGTCCAGCTGGGCGTAGTCCAGCA
droWil2 scf2_1100000004511:10487564-10487906 - T---------------------------------------------------ATT--CGTTGTTTAAGTTTAA------TGTTAAATATATATCAAAATTGGACTAGTTTTTGTTGTTGTCATGCTTATTGGTTGCTTTACAAGATTT-GG------------------------------TAAATGCCTAAGATCGATCGATAGGAATATTGCTGGTATATAATGAA-TTCA-TTG-----T---TTTGTGCCCATCT-AACTAAA---AGCCAT--A----------AATTTATTAAACTAAAAGAAAACTCTA---ACCATCTATAGATGACTCTATCG----------------------------------------------------------------------------CCTCCCTTTTTTAATCTCTGACCCTCTCTCTCTCTCTGGCTCGTTCGGTTG--CTCGCGGTTACTTCATAAGCTCACACATTAGATTCCTCAGGTAGACATCAAGTTGGGCATAGTCCAGAA
droVir3 scaffold_12758:531578-531710 + ----------------------------------------------ATTGTAATT--TATTATTTAAGTTTAT------TGTTAAATTTATATAAAAATTGGACTATATATG----------TGCAGGCTTGCTGCCTTACAAGAATT-GGTTACATTGGGGTTAT--T-----TTGGGGGTAAATGCCTAGGATCA-----TGGGAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:1613376-1613670 + ----------------------------------------------ATTATTATT--GTTTA----AGTTTAA------TGTTAAATATATATAAAAATTGGACTATATGCA----------GGCT----TGTTGCCTGTCACGAGTTGGA------------------------------TAAATGCCTAGGATCA-----TAGGAATT-------------ACGTT-TACT-G--------------ATTCTCCA-----CTAAA-GAAGCG-------------------------------------TTGTA---AGTCTACACAGGCAATTTTCTAGTGAGGATTCCTGCTTTTCCGC-CTTTACCCTGTT--------------CTCTAAGGAACCAACACCGGCATTT------------------------------------------------ATATTGATCTAGAGCTCACTTCATCAGCTCAGCCATCAGATTCCGTACATAGACATCCAGTTGTGAGTAGTCGAGCA
droGri2 scaffold_15110:938242-938528 - ----------------------------------------------ATTTATATT--TGTTAATTAAGTTTAATGTTAATGTTAAATATATATAAAAATTGGACTAGTT-------------------------GATTTACAAGAATT-GGTTACAATT--------GGATTAATTGGGGTTAAATGCCTAGAATCA-----TAGGAATTAC--------G--TTATT-TACT-GAC-----T----TGGTGCTGTTTTGGACTAAA---AGCAAT--TAAGTCTAAAAACTC---------------------TACATACCA---------------------------------------------------T------------GAA-----------------GGGCATTCTATCCTCCAT-------CCTCTGA--------------------------------CTTGATCTCACTTCATCAGCTCGGACATCAGATTGCGCAGATAGACATCCAGTTGGGCATAGTCGAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCGCCCAAATGCATTTCCGGTGTTGGCCAGAAAGGCGCCATCCTAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCAG--ATCGACTAATAATTT-----------------------------------------------------------------CATAATTT-------TTCATTTGTTG---GAA---------------------------------------------------------------------------------CGGCCTCTCACTTCAACAGCTCGCACATGAGATTCCGCAGGTAGACATCTAGCTGGGCGTAATCCAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................TAAAAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................26111.001100000091000001000
..........................................................................................TATAAAAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2816.00600000032100000000
..........................................................................................TATAAAAATTGGACTAGTTGTA----------AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2514.00400000031000000000
..................................................................................................TTGGACTAGTTGTA----------AGCA-----GCTGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300000011001000000
..................................................................................................................................................T--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATA..........................................................................................................................................................................................................................................................................................................................................2713.00300010011000000000
.................................................................................................................................................TT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATA..........................................................................................................................................................................................................................................................................................................................................2813.00300000012000000000
..................................................................................................TTGGACTAGTTGTA----------AGCA-----GCTGCTTT.................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000001010000
........................................................................................TTTATAAAAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................3012.00200000020000000000
...........................................................................................ATAAAAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000011000000000
........................................................................................TTTATAAAAATTGGACTAGTTGTA----------AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000020000000000
........................................................................................................................................................................................................................................T-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGC...........................................................................................................................................................................................................................................................................2712.00200000020000000000
.........................................................................................TTATAAAAATTGGACTAGTTGTA----------AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000020000000000
........................................................................................TTTATAAAAATTGGACTAGTTGTA----------AGCA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000001000001000
............................................................................................TAAAAATTGGACTAGTTGTA----------AGCA-----G........................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000011000000000
........................................................................................................TAGTTGTA----------AGCA-----GCTGCTTTACAGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.........................................................................................TTATAAAAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
......................................................................................TATTTATAAAAATTGGACTAGTTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
........................................................................................................................................................................................................................................T-CTA-----C----CTGTGCGCCTCT-ATCT....................................................................................................................................................................................................................................................................................2111.00100000000001000000
................................................................................................AATTGGACTAGTTGTA----------AGCA-----GCTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.............................................................................................................................................................................................TAGAATCA-----TAGGAATAT---------A--ATGGT-TGC....................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.............................................................................................AAAAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
...................................................................................AAATATTTATAAAAATTGGACTAGTTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..........................................................................................TATAAAAATTGGACTAGTTGTA----------AGCA-----G........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.........................................................................................................................................TTACAGGATT--GG------------------------------TAAATGCCTAGAA..........................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
........................................................................................TTTATAAAAATTGGACTAGTTGTA----------T.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.................................................................................................................................................TT--GG------------------------------TAAATGCCTAGAATCA-----TAGGA.............................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...................................................................................................TGGACTAGTTGTA----------AGCA-----GCTGCTTTA................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
....................................................................TTTAA------TGTTAAATATTTATAAAAATTGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
...............................................................................................................................................GATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAA............................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..............................................................................................................TA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAA...................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
................................................................................................................................................................................................................TAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCC............................................................................................................................................................................................................................................................................................2611.00100010000000000000
.........................................................................................TTATAAAAATTGGACTAGTTGTA----------AGCA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..................................................................................................TTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..................................................................................................TTGGACTAGTTGTA----------AGCA-----GCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
........................................................................................................................................................................................................................................................TGTGCGCCTCT-ATCTAAA---AA............................................................................................................................................................................................................................................................................2011.00100000000001000000
................................................................................................AATTGGACTAGTTGTA----------AGCA-----GCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...................................................................................................TGGACTAGTTGTA----------AGCA-----GCTGCTTT.................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
...................................................................................................TGGACTAGTTGTA----------AGCA-----GCTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000010000
...............................................................................................AAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
..........................................................................................................................................TACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----..................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.............................................................................................AAAAATTGGACTAGTTGTA----------AGCA-----GCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
droSec2
CCGCCCAAATGCATTTCCGGTGTTGGCCAGAAAGGCGCCATCCTAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GA------------------------------TAAATGCCTAGAATCA-----TAGGAAAAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCAG--ATCGACTAATAATTT-----------------------------------------------------------------CATAATTT-------TTCATTTGTTG---GAA---------------------------------------------------------------------------------CGGCATCTCACTTCAACAGCTCGCACATGAGATTCCGCAGGTAGACATCTAGCTGGGCGTAATCCAGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................TAAAAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.................................................................................................................................................................................................................................GGT-TGCT-CTA-----C----CTGTGCGCCT...........................................................................................................................................................................................................................................................................................2111.0011000
............................................................................................................................CA-----GCTGCTTTACAGGATT--GA------------------------------TAAAT..................................................................................................................................................................................................................................................................................................................................................................2511.0010010
dm3
CTGCCCAAATGCATTTCCGGTGTTGGCCAGAAAGGCGCCATCCTAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCAG--ATCGACTAATAATTT-----------------------------------------------------------------CATAAATT-------TTCATTTGTTG---GAA---------------------------------------------------------------------------------CGGCCTCTCACTTCAACAGCTCGCACATGAGATTCCGCAGGTAGACATCTAGCTGGGCGTAATCCAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................TGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-.......................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................ATAAAAATTGGACTAGTTGTA----------AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----C....................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................AAAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................ACAGGATT--GG------------------------------TAAATGCCTAGAATC........................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----CTG..................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CATTTCCGGTGTTGGCCAGAAAGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCCGGTGTTGGCCAGAAAGGCGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................A----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------T......................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..................................................................................................TTGGACTAGTTGTA----------AGCA-----GCTGCTTT.................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------.......................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TCCTAGATTGGTACT--TTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AAAAATTGGACTAGTTGTA----------AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TATAAAAATTGGACTAGTTGTA----------AG................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TATAAAAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TTACAGGATT--GG------------------------------TAAATGCCTAGA...........................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGAATCA-----TAGGAATAT---------A--ATGGT-TGC....................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TA.....................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............TTTCCGGTGTTGGCCAGAAAGGCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TAAAAATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................ATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAA............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATCCTAGATTGGTACT--TTTTAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................TA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------.......................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................CTGTGCGCCTCT-ATCTAAA---AG............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................CA-----GCTGCTTTACAGGATT--GG------------------------------TA.....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................ACAGGATT--GG------------------------------TAAATGCCTAG............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GT-TGCT-CTA-----C----CTGTGCGCCTCT-........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TAAAAATTGGACTAGTTGTA----------AGCA-----GA.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................TAA------TGTTAAATATTTATAAAAATTGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................ATTTATAAAAATTGGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----..........................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ATTGGACTAGTTGTA----------AGCA-----GCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------T......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................A--ATGGT-TGCT-CTA-----C----CTGTGCGC.............................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TAT---------A--ATGGT-TGCT-CTA-----C----C....................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CTAGAATCA-----TAGGAATAT---------A--ATGGT-.......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................................TA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCA.........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................AT---------A--ATGGT-TGCT-CTA-----C----CTGTGCG..............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TTATAAAAATTGGACTAGTTGTA----------AGCA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................TCCTAGATTGGTACT--TTTTAATCATGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TATTTATAAAAATTGGACTAGTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTA----------AGCA-----GCTGCTTTACAGGATT--G......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---..............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................AAAATTGGACTAGTTGTA----------AGCA-----GCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTTCCGGTGTTGGCCAGAAAGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TTATAAAAATTGGACTAGTTGTA----------AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................TACAGGATT--GG------------------------------TAAATGCCTAGAA..........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................T-TGCT-CTA-----C----CTGTGCGCCTCT-ATCT....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CCTAGAATCA-----TAGGAATAT---------A--ATGGT-.......................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................CCAGAAAGGCGCCATCCTAGATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................GCTGCTTTACAGGATT--GG------------------------------TAAA...................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AATTGGACTAGTTGTA----------AGCA-----GCTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................CA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----C....................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGGTGTTGGCCAGAAAGGCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGC...........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CCTAGATTGGTACT--TTTTAATCATGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....CAAATGCATTTCCGGTGTTGGCCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................TTTATAAAAATTGGACTAGTTGTA----------AGCA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................A--ATGGT-TGCT-CTA-----C----CTGTGC...............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TAGTTGTA----------AGCA-----GCTGCTTTACAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TCA-----TAGGAATAT---------A--ATGGT-TGCT-C.................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CTAGAATCA-----TAGGAATAT---------A--ATGGT-TGC....................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................GTTAAATATTTATAAAAATTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CTA-----C----CTGTGCGCCTCT-ATCTAG..................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CA-----TAGGAATAT---------A--ATGGT-T......................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................CTTTACAGGATT--GG------------------------------TAAATGCCTA.............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............TCCGGTGTTGGCCAGAAAGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................AGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAG...............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TGCTTTACAGGATT--GG------------------------------TAAATGCC...............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TCA-----TAGGAATAT---------A--ATGGT-TGCT-CT................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACTAGTTGTA----------AGCA-----GCTGCTTTACAGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TAAAAATTGGACTAGTTGTA----------AGCA-----GCT......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TATTTATAAAAATTGGACTAGTTGTA----------..................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TATAAAAATTGGACTAGTTGTA----------AGCA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................................................AATTGGACTAGTTGTA----------AGCA-----GCTGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CAGGATT--GG------------------------------TAAATGCCTAGA...........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................TTTACAGGATT--GG------------------------------TAAATGCC...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................A-----C----CTGTGCGCCTCT-ATCTAAA---A.............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCACATGAGATTCCGCAGGTAGACA......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AA------TGTTAAATATTTATAAAAATTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................A-----TAGGAATAT---------A--ATGGT-TGCT-CT................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGGCCAGAAAGGCGCCATCCTAGATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................TTACAGGATT--GG------------------------------TAAATGCCTAGAA..........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................GGTGTTGGCCAGAAAGGCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................AT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGC.............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGGTGTTGGCCAGAAAGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ATTGGACTAGTTGTA----------AGCA-----GC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AGTTGTA----------AGCA-----GCTGCTTTACAGGATT--.......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................CTTTACAGGATT--GG------------------------------TAAATGCCTAG............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TAAATATTTATAAAAATTGGACTAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................T-TGCT-CTA-----C----CTGTGCGCCTCT-T.......................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCCGGTGTTGGCCAGAAAGGCGCCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................ACAGGATT--GG------------------------------TAAATGCCTAGA...........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CA-----TAGGAATAT---------A--ATGGT-TGCT-..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTTCCGGTGTTGGCCAGAAAGGCGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................TTACAGGATT--GG------------------------------TAAATGCCTA.............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................T-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AAA...........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................AATCA-----TAGGAATAT---------A--ATGAG-A......................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCGCCCAAATGCATTTTCGGTGTTTGCCAGAAGGACGCCATCCTAGATTGGTACC--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCAG--ATCGACTAATAATTT-----------------------------------------------------------------CTTCATTT-------TTCTTTTGTTG---GTACT----------------------TCATC-----------------------------ACT--------------------CATCAGCTCACTTCATCAGCTCGCACATGAGATTCCGCAGGTAGACATCCAGCTGGGCGTAGTCCAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................GT-TGCT-CTA-----C----CTGTGCGCC............................................................................................................................................................................................................................................................................................1911.0010000010
droYak3
CCTCCCAAATGCATTTCCGGTGTGGGCCAGAAAGACGCCATCCTAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----C----CTGTGCGCCTCT-ATCTAAA---AGCCAG--ATCGACTAATAATTT-----------------------------------------------------------------CTTCATTT-------TTCTTTTGTTGTTGAAA---------------------------------------------------------------------------------CGGCCCCTCACTTCATCAACTCGCACATGAGATTCCGCAGGTAGACATCTAGCTGGGCGTAATCCAGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............TCCGGTGTGGGCCAGAAAGACGCCATCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
.............................................................................................................GTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TA.....................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
droEug1
CCGCCCAAATGCATTTCCGGTGTTGGCCACAAAGACGCCATCCTAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGAATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----CTGTGCGCCTCT-ATCTAAA---AGCCAG--TTCGACTAATAAGTT-----------------------------------------------------------------CTCGTTTT-------ATCTTTCTTTG---GAA---------------------------------------------------------------------------------CGGCTCTTCACTTCATCAGTTCGCACATGAGATTCCGCAGGTAGACATCCAACTGGGCGTAATCCAGCASizeHit CountTotal NormTotal
No Reads
droBia1
CCGCCCAAATGCATTTCCCGTGTTGGCCAGAAAGACGCCATCCCAGATTGGTACT--TTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGGATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----CTGTGCGCCTCT-ATCTAAA---AGCCAG--TTCGACTAATAAGTT-----------------------------------------------------------------CTCGTT-T---ATCATTCTCTTGTTT--GGAA---------------------------------------------------------------------------------CGGCTCCTCACTTCATCAGCTCGCACATGAGATTCCGCAGGTAGACATCCAACTGGGTGTAATCCAGCASizeHit CountTotal NormTotal
No Reads
droTak1
---------------------------------------------------------TTTGAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGGATCGT--AGTAGGAATAT---------A--ATGGT-------------------------GCCTCT-ATCTAAA---AGCCAG--TTTGACTAATAAGTT-----------------------------------------------------------------CTTCG-----------------------------------------------------------------------------------------------------------------TTTCATTTCATCAGCTCGCACATGAGGTTCCGCAGGTAGACATCCAACTGGGCGTAATCCAGCASizeHit CountTotal NormTotal
No Reads
droEle1
--------ATGCATTTCCGGTGTTGGCCAGAAAGACGCCATCCCAGATTGGTAGT--TTTGAGTCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGGATCG-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----CTGTGCGCCGCT-ATCTAAA---AGCCAG--TACGACTAAT----T----------------------------------------------------------CT-CGTTCTCGT-TT---CTCTTTCTCACATG----GGA----------CCACCACCA-------------------------------------------------------------AACGCACCTCACTTCATCAGTTCGCACATGAGATTCCGCAGGTAGACATCCAACTGGGCGTAATCGAGGASizeHit CountTotal NormTotal
No Reads
droRho1
CCGCCCAACTGCATTTCCGGTGTTGACCAGAAAGACGCCATTCTAGATTGGTACT--TTTTAATATTGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGGATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----CTGTGCGCCTCT-ATCTAAA---AGCCTG--TACGACTAATAAGTT-----------------------------------------------------------------CTCGTTTT-------ATCTTTTGTTG---GAA---------------------------------------------------------------------------------ACGCACCTTACTTCATCAGCTCGCACATGAGATTCCGCAGATAAACATCCAGCTGGGCGTAATCCAGGASizeHit CountTotal NormTotal
No Reads
droFic1
CCGCCCAAATGCATTTTCGGTGTTGGCCTGAAAGTCGCCATCCTAGATTGGTACT--TTTTAATATTGTTTAC------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GG------------------------------TAAATGCCTAGGATCA-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----CTGTGCGCCTCT-ATCTAAA---AGCCAG--TACGACTAATAAGTT-----------------------------------------------------------------CTCGTTTT-------ATCTCTCGTTG---GAA---------------------------------------------------------------------------------ACGCACCTCACTTCATCAGCTCGCACATGAGGTTCCGCAGGTAGACATCCAACTGGGCGTAATCGAGCASizeHit CountTotal NormTotal
No Reads
droKik1
CCTTCCAAATGCATTTCTGGTGTGGGC-----------CACTCTAGTTTGGTACTCACTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GGTCGCGA----------GGAC-----ACATGTAAATGCCTAGGATCC-----TAGGAATAT---------ATCATGATTTGCT-CTAGTATGT----CAGTGCGTATCT-ATCTAAA---AGCCAGAGTATGACTAATAACTT-----------------------------------------------------------------CTCGC--------------------G---GAA---------------------------------------------------------------------------------CCTCTCCTCACTTCATCAGCTCGCACATGAGGTTGCGCAGGTAGACATCCAACTGGGCGTAATCCAGCASizeHit CountTotal NormTotal
No Reads
droAna3
CCGCCCAAATGCATTTTCCGTGTTGGCCAGATAAACGGCATCCTAGTTTGGTACT--CTTTAATTATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GGTCACGAG---------GGAC-----AAATGTAAATGCCTAGAATCG-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----TGGTGCACCTCT-ATCTAAAAAAAGCCAG--TATGACTAATAACTT-----------------------------------------------------------------CTTTTTGA-------ATCTCTCGTGG---GAA--------------------------------------------------------------------------------ATGGCCCATCACTTCATTAGCTCGCACATTAGATTTCGCAGATAAACGTCCAGCTGGGCGTAGTCCAGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................A----------AGCA-----GCTGCTTTACAGGATT--.......................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................AAATATTTATAAAAATTGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
CCGCCCGAAGGCATTTTCCGTGATGGCCAGATAAACGGCATCCTAGTTTGGTACT--CTTTAATTATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------AGCA-----GCTGCTTTACAGGATT--GGTCACGAA---------GGAC-----AAATGTAAATGCCTAGAATCG-----TAGGAATAT---------A--ATGGT-TGCT-CTA-----T----TGGTGCACCTCT-ATCTAAAAGAAGCCAC--TATAACTAATAACTT-----------------------------------------------------------------TTCTTTGA-------ATCTCTCGTGG---GAA--------------------------------------------------------------------------------TCGGCCAATCACTTCATTAGCTCGCACATCAGATTTCGCAGGTAAACATCCAGCTGGGCGTAATCCAGGASizeHit CountTotal NormTotal
No Reads
dp5
CCGTGGAAATGCATTTCCGT-----------------------TAGATTGGTACT--CTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------TGCC-----TGCGCTTTACAAGATT--GGTCTCTCGCGAGTCTCGGA-----TCGGATGTAAATGCCTAGGATCA-----TTGGAATAT---------ATAACGTT-TGCATGTCGCATGTCGCGGGGTGCTCTTCT-AACTAAA---AGCA-----------AATAAGTCTACGAA------------CTCCACGCGCCC--------------CCTC--GGGGGCCTCT-CCTTCCTGC-CT---CCCTGTC--------------CT-----------------------------------------------------------------------------------CCATCACTTCATCAGCTCGCACATGAGATTCCGCAGGTAGACGTCCAGCTGGGCGTAGTCCAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................ATGTCGCGGGGTGCTCTTC..........................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................................................................................CGGATGTAAATGCCTAGG...........................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
............ATTTCCGT-----------------------TAGATTGGTACT--CTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...TGGAAATGCATTTCCGT-----------------------TAGATTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................GTCTCTCGCGAGTCTCGGA-----TCGGATG.......................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...............................................................................................................................................GATT--GGTCTCTCGCGAGTCTCGGA-----T.............................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000
........................................................................................................................................................CTCTCGCGAGTCTCGGA-----TCGG..........................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................TT-TGCATGTCGCATGTCGCGGGG..................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................................................................................................................................................CTCGGA-----TCGGATGTAAATGCC...............................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
......AAATGCATTTCCGT-----------------------TAGATTGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
................................................................................................................................................................................................................TAT---------ATAACGTT-TGCATGTCGCATG..........................................................................................................................................................................................................................................................................................................2411.0010000100000
.......................................................................................................CTAGTTGTA----------TGCC-----TGCGCTTT.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
CCGTGGAAATGCATTTCCGT-----------------------TAGATTGGTACT--CTTTAATCATGTTTAA------TGTTAAATATTTATAAAAATTGGACTAGTTGTA----------TGCC-----TGCGCTTTACAAGATT--GGTCTCTCGCGAGTCTCGGA-----TCGGATGTAAATGCCTAGGATCA-----TTGGAATAT---------ATAACGTT-TGCATGTCGCATGTCGCGGGGTGCTCTTCT-AACTAAA---AGCA-----------AATAAGTCTACGAA------------CTCCACGCGCCC--------------CCTC--GGGGGCCTCT-CCTTCCTGC-CA--------------GGAG---GAC-----AGGGACCT------------------------------------------------------------------------CCATCACTTCATCAGCTCGCACATGAGATTCCGCAGGTAGACGTCCAGCTGGGCGTAGTCCAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........GCATTTCCGT-----------------------TAGATTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
...............................................................................................................................................................................................................................................ATGTCGCGGGGTGCTCTTCT-AACT....................................................................................................................................................................................................................................................................................2412.002200000
..............TTCCGT-----------------------TAGATTGGTACT--CTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
.........................................................................................................................................................................................TGCCTAGGATCA-----TTGGAATAT---------A...............................................................................................................................................................................................................................................................................................................................2212.002200000
....GGAAATGCATTTCCGT-----------------------TAGATTGGTACT--...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
............ATTTCCGT-----------------------TAGATTGGTACT--CTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
.................................................................................................................................................................................................................AT---------ATAACGTT-TGCATGTC...............................................................................................................................................................................................................................................................................................................1811.001100000
....................................................................................................................................................................................GTAAATGCCTAGGATCA-----TTGGA.............................................................................................................................................................................................................................................................................................................................................2211.001001000
.....................................................................................ATATTTATAAAAATTGGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................................................................................................AATTGGACTAGTTGTA----------TGCC-----T........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................................................................................................................................ACAAGATT--GGTCTCTCGCGAGTCTCGGA-----T.............................................................................................................................................................................................................................................................................................................................................................................2911.001100000
...........CATTTCCGT-----------------------TAGATTGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
................................................................................GTTAAATATTTATAAAAATTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.............................................................................................................................................................................................................................................GCATGTCGCGGGGTGCTCTTCT-........................................................................................................................................................................................................................................................................................2211.001001000
.............TTTCCGT-----------------------TAGATTGGTACT--CTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
............ATTTCCGT-----------------------TAGATTGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..............................................................................................................................................................................TCGGATGTAAATGCCTAGGATCA-----TTGG..............................................................................................................................................................................................................................................................................................................................................2711.001010000
.............TTTCCGT-----------------------TAGATTGGTACT--...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........CATTTCCGT-----------------------TAGATTGGTACT--CTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droWil2
T---------------------------------------------------ATT--CGTTGTTTAAGTTTAA------TGTTAAATATATATCAAAATTGGACTAGTTTTTGTTGTTGTCATGCTTATTGGTTGCTTTACAAGATTT-GG------------------------------TAAATGCCTAAGATCGATCGATAGGAATATTGCTGGTATATAATGAA-TTCA-TTG-----T---TTTGTGCCCATCT-AACTAAA---AGCCAT--A----------AATTTATTAAACTAAAAGAAAACTCTA---ACCATCTATAGATGACTCTATCG----------------------------------------------------------------------------CCTCCCTTTTTTAATCTCTGACCCTCTCTCTCTCTCTGGCTCGTTCGGTTG--CTCGCGGTTACTTCATAAGCTCACACATTAGATTCCTCAGGTAGACATCAAGTTGGGCATAGTCCAGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................AATTGGACTAGTTTTTGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............................................................................................................................................................................................................................................................................................................AAAGAAAACTCTA---ACCATCA......................................................................................................................................................................................................................2011.00100001
......................................................................................................................................................G------------------------------TAAATGCCTAAGATCGATCG...................................................................................................................................................................................................................................................................................................................................................2111.00100010
......................................................................TAA------TGTTAAATATATATCAAAATTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCTCTCTCTCTGGCTC................................................................................2040.25110000
droVir3
----------------------------------------------ATTGTAATT--TATTATTTAAGTTTAT------TGTTAAATTTATATAAAAATTGGACTATATATG----------TGCAGGCTTGCTGCCTTACAAGAATT-GGTTACATTGGGGTTAT--T-----TTGGGGGTAAATGCCTAGGATCA-----TGGGAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................TATG----------TGCAGGCTTGCTGCCTTA................................................................................................................................................................................................................................................................................................................................................................................................................2213.003000000000000000000000000000003000000000000000000000000000000000
.......................................................................................TTATATAAAAATTGGACTATATATG----------TGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000001100000000000000000000000000000000000
droMoj3
----------------------------------------------ATTATTATT--GTTTA----AGTTTAA------TGTTAAATATATATAAAAATTGGACTATATGCA----------GGCT----TGTTGCCTGTCACGAGTTGGA------------------------------TAAATGCCTAGGATCA-----TAGGAATT-------------ACGTT-TACT-G--------------ATTCTCCA-----CTAAA-GAAGCG-------------------------------------TTGTA---AGTCTACACAGGCAATTTTCTAGTGAGGATTCCTGCTTTTCCGC-CTTTACCCTGTT--------------CTCTAAGGAACCAACACCGGCATTT------------------------------------------------ATATTGATCTAGAGCTCACTTCATCAGCTCAGCCATCAGATTCCGTACATAGACATCCAGTTGTGAGTAGTCGAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
----------------------------------------------ATTTATATT--TGTTAATTAAGTTTAATGTTAATGTTAAATATATATAAAAATTGGACTAGTT-------------------------GATTTACAAGAATT-GGTTACAATT--------GGATTAATTGGGGTTAAATGCCTAGAATCA-----TAGGAATTAC--------G--TTATT-TACT-GAC-----T----TGGTGCTGTTTTGGACTAAA---AGCAAT--TAAGTCTAAAAACTC---------------------TACATACCA---------------------------------------------------T------------GAA-----------------GGGCATTCTATCCTCCAT-------CCTCTGA--------------------------------CTTGATCTCACTTCATCAGCTCGGACATCAGATTGCGCAGATAGACATCCAGTTGGGCATAGTCGAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 03:33 PM