ID:

dsi_15347

 Coordinate:

2r:10042240-10042389 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.9 -12.2 -12.1 -12.1

Flybase annnotation

CDS [2r_10042390_10042548_-]; exon [2r_10042390_10042548_-]; intron [2r_10041848_10042389_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCATTCACTTGGTTTCGGCTGCACTGGGTCCTGAGATCTGGCTGACCAAGGTAGGCGAGGTTCTGAAGGCGCCCAGCGAAGATCATTGCTACCGGAACTTCTTTGCATACCCTTTAATTATTTCTGTAGTTATGTAAGCATATTCTTAAGAGTTTTATTTCGTTACGTTTATCCTAGAGTTTAGAGTTCGAGTTTTTGTTTAGGCTGCTTAGGTTTAAGCTCGGCTCGGCTACCTTAAGTTCTGTTCAAT
*******************************************************************************..((.......((..(((((((((((.........((((...((((..((.((((....))))..))..)))).........)))).........)))))....))))))..))....))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR902009
testis
 M023
head
 M024
male body		 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
..ATTCACTTGGTTTCGGCT...................................................................................................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...........GTTTCGGCTGCACTGGGTCCTGA........................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...............CGGCTGCACTGGGTCCTGAGATCTG.................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................TGGGTCCTGAGATCTGGCTGAC............................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................GTCCTGAGATCTGGCTGACCAA......................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................GTTTAGAGTTCGAGTTTTTGT................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................AGATCATTGCTACCGGAACTTC..................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................................GTAGGCGAGGTTCTGAAGGCG................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................TCCTGAGATCTGGCTGACC........................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............TTTCGGCTGCACTGGGTCC........................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.CATTCACTTGGTTTCGGCC...................................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AGAGTTGAGAGTTTGAGTTT....................................................... 20 2 1 1.00 1 0 0 0 0 0 1 0 0 0
...TTCACTTGGTTTCGGCTG..................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
............................................................................................CAGAACCTCTTTGCATATCCTT........................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0
.........................................CTGACACAGGTAGGCGAG............................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 1 0 0 0
.................................................GGTAGGAGAGGTTCT.......................................................................................................................................................................................... 15 1 4 0.25 1 0 0 0 0 0 0 0 1 0
..................................................GTAGGAGAGGTTCTG......................................................................................................................................................................................... 15 1 5 0.20 1 0 0 0 0 0 0 0 1 0
.......................................................................................................................ATTTCTGTAGTTGTCTAA................................................................................................................. 18 2 8 0.13 1 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................AGAGTTTACAGTTCGAGATC....................................................... 20 3 10 0.10 1 0 1 0 0 0 0 0 0 0
.........................................................ACGTTCTGAAGGCGC.................................................................................................................................................................................. 15 1 11 0.09 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GGTAAGTGAACCAAAGCCGACGTGACCCAGGACTCTAGACCGACTGGTTCCATCCGCTCCAAGACTTCCGCGGGTCGCTTCTAGTAACGATGGCCTTGAAGAAACGTATGGGAAATTAATAAAGACATCAATACATTCGTATAAGAATTCTCAAAATAAAGCAATGCAAATAGGATCTCAAATCTCAAGCTCAAAAACAAATCCGACGAATCCAAATTCGAGCCGAGCCGATGGAATTCAAGACAAGTTA
***************************************************..((.......((..(((((((((((.........((((...((((..((.((((....))))..))..)))).........)))).........)))))....))))))..))....))******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
....................................................................TGCGGGTCGCTTCTAGTAACGA................................................................................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................TCTCAAATCTCAAGCTCAGGA...................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0
.............AAGCCGACGTGACCCAGGACT........................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................ACTGGTTCCAGCCGC................................................................................................................................................................................................. 15 1 9 0.22 2 0 0 2 0 0 0 0 0
................................................................................................TGAAGAAGCGTATGG........................................................................................................................................... 15 1 10 0.20 2 0 0 0 2 0 0 0 0
...........................................................................................................................................................................................................................GGGCCGAGCCGATGGAAG............. 18 2 6 0.17 1 0 0 1 0 0 0 0 0
....AGTGAACCAAAGCCCA...................................................................................................................................................................................................................................... 16 1 7 0.14 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................ACGGGCCGGGCCGATGGAA.............. 19 3 12 0.08 1 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................AAATGAGACGAATCCAAA.................................. 18 2 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................AGTAATGCTACTAGGATCT........................................................................ 19 3 17 0.06 1 0 0 0 0 0 0 1 0
....AGTGAACCAAAGCCCAT..................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10042190-10042439 - dsi_15347 CCATTCACTTGGTTTCGGCTGCACTGGGTCCTGAGATCTGGCTGACCAAGGTAGGCGA-------GGTT---CTGAAGGCG-----------------CCCAGC--GAAGAT--------------------------------------------------------------------------------CATTGC---TACCGGAACTTCTT---TGCATACCCTTTAATTATTTCTGTAGTTATGTAAGCATAT-----------------TCTTAAGAG-----------TTT--TAT----TTCGTTACGTTTATC--CTAGAGTTTAGAGTTCGAGTTTTTGTT--TAGGCTGCTTAGGT--TTAAGCTCG-GCT-----------------CGGCTACC------------TTAAGTTCTGTTCAAT------------
droSec2 scaffold_1:6897982-6898231 - CCATTCACTTGGTTTCGGCTGCACTGGGTCCTGAGATCTGGCTCACCAAGGTAGGCGA-------GGTT---CTGAAGGCG-----------------CCCAGC--GAAGAT--------------------------------------------------------------------------------GAGTGC---TACCGGAACTTCTT---TGCATACCCTTTAATTATTTCAGTAGTTATGTAAGCATAT-----------------TCTTAAGAG-----------TTT--TAT----TTCGTTACGTTTATC--CTAGAGTTTAGAGGTCGAGTTTTTGTT--TAGGCTGCTTAGGT--TTAAGCTCG-GCT-----------------CGGCTACC------------TTAAGTTCTGTTCAAT------------
dm3 chr2R:9378741-9378989 - CCATTCATTTGGTTTCGGCTGCACTGGGTCCTGAGATCTGGCTCACCAAGGTAGGCGA-------GGTT---CTGAGGGCG-----------------ACCAGC--GAAGAT--------------------------------------------------------------------------------CATTGT---TACCGGAACTTCTT---TGCATATCCTTTAATTATTTCTGTAGTTATGTAAGCATAT-----------------TCTTAAGAG-----------TTC--TAT----TTCGTTACGTTTATA--CTAGAGTTTAGAGTTCGAGTTTC-GTT--TAGGCTGCTTAGGA--TTAAGCTCG-GCT-----------------CGGCTAGC------------TTAAGTTTTGTTCAAT------------
droEre2 scaffold_4845:16437139-16437399 + CAATTCATCTGGTTTCGGCTGCACTGGGTCCTGAGATCTGGCTCACCAAGGTAGGGGA-------GGTTCGCCCGGAGGCG-----------------CCCGGC--GAAGAT------A-----------------------------------------------------------------CTTTAAAGCATTGT---TTCCAGAACTTCTT---TGCATATCCTATAATTATTTCCTTAGATATGTAAGCATAT-----------------ATTTAAGAG-----------TTT--TAT----TTCGTTACGTTTATC--CTAGAGTTTAGAGTTCGAGTTTC-GTT--TAGGCTGCTTAGGA--TTAAGCTCG-GCT-----------------CAGCTGCC------------TTAAGTTCTGTTCTAT------------
droYak3 2R:7575069-7575326 + CCATTCATCTGGTTTCGGCGGCACTGGGTCCTGAGATCTGGCTCACCAAGGTAGGGGA-------GGTT---CCGAAGGCG-----------------TCCGGC--GAAGAT------A-----------------------------------------------------------------ATTTAAAGTATTGT---TTCCGGTACTTCTT---TGCATACCCTATATTTATTTCATTAGATATGTAAGCATAT-----------------GTTTAAGAG-----------TTT--TAT----TTCGTTACGTTTATC--CTAGAGTTTAGAGTTCGAGTTTT-GTT--TAGGCTGCTTAGGA--TTAAGCTCG-GCT-----------------CGGCTGCC------------TTAAGTTCTGTTCTAT------------
droEug1 scf7180000409758:345402-345672 + CCATTCATCTGATATCGGCTGCGCTGGGTCCCGAGATCTGGCTGACAAAGGTAGGAGA-------GGTT---CTAAAGGCA-----------------ACCAGC--GAAGAA------TC-TGAAAT--------------------------------------------------AATTTCGATTTAAAACATTAT---TCCCGGAAATT-TT---TGTATACCCTTTTATATTTTCTATAGACATTTAAGCATAT-----------------CTGTAAGAG-----------TTT--TAT----TTTGCTACGTTCACA--TTAGAGTTTGGAGTTCGATTTTC-ATG--TAGGCTGCCTAGGA--TTAAGCTCG-GCT-----------------CAGTTGCC------------TTAAGTTCTGTTTTAT------------
droBia1 scf7180000302291:793424-793689 + CCATTCATCTGGTATCAGCTGTGCTAGGCCCTGAGATCTGGCTGACCAAGGTAGAAGA-------GGTT---CTGAAGGCA-----------------CCCAGC--GAGGAC------CT-TCGAGTAACTC--------------------------------------------CTATT---TTTTAGTGCATTAT---TTCCGGAAGTTCTT---TGCATTCCTTTTTATTT---------ATATATAAGCATAT-----------------TTTTAAGAG-----------TTA--TAT----TTCGTTACGTTTAGC--GTAGACTTTAGCGTTCGAGATTC-ATA--CAGGATGCTTTGAA--TTAAGCTTG-GCT-----------------AGGATGCC------------CTTAGTTCCGTTTAGT------------
droTak1 scf7180000415379:556499-556767 - CCATTCACCTGGTGTCCGCTGTGCTGGGTCCTGAGATCTGGCTGACCAAGGTATGAGA-------GGTT---CTGAGGGCA-----------------CCCTAACTGGAGAC---------CGGTT-----------------------------------------------------TTTCGATTTATAGCATTAT---TTCCGGAAGTTCTT---TAGATTCCCCCTTATATTTTACTTAGATATTTAAGCGTAT-----------------TTCTAAGAG-----------TTT--TAT----TTCGTTACGTTTACC--ATAGAGTTTAGAGCTCGAGTTTT-ACT--TAGGCTGCTTCGGA--TTGAGCTCG-TCT-----------------CAGATGCC------------TTAAGTTCTGTTCAGT------------
droEle1 scf7180000491282:614001-614263 - CCATTCACCTGGTGTCGGCTGTGCTGGGCCCTGAGATCTGGTTGACTAAGGTAGGAGT-------GGTA---CCGAAGTCA-----------------CCCCAC--GAAGAT------CC-TCGAATAA-------------------------------------------------------------TTAATTAT---TCCC-GAAGTTTTTTTTCGCATACCCTTTTATATTTTCTTTAGATAATTAAGCGTAT-----------------TTTTAAGAG-----------TTT--TAT----TTCGTTACGTTAACA--TTAGAGTTTAGAGTTGGAGTTTC-ATT--TAGGCTGCTTAGAA--TTAAGCTCG-GCT-----------------CAGCTGCC------------TTAAGTTTCGTTCTTG------------
droRho1 scf7180000780288:15650-15914 - CCATTCACCTAGTGTCTGCCGTGCTCGGTCCTGAGATCTGGTTGACTAAGGTAGGAGT-------GGTT---CCGAAGTCA-----------------CCCCAC--GAGGAC------CC-TCGAATTACAC-------------------------------------------CTAATTT----------TGATAA---TTTCGGAAGATTTT---TGCATACCCTTTAATATTTTCTTTAGATATTTAAGCGTAT-----------------TTTTAAGAG-----------TTTTTTAT----TTCGTTACGTTAACA--TTAGAGTTTAGAGCTCGAGTTTC-ATT--TAGGCTGCTTAGGA--TTAAGCTCG-GCT-----------------CAGCTGCC------------TTAAGTTTTG------------------
droFic1 scf7180000454039:192680-192959 - CCATTCACCTGGTGTCCGCTGCTCTGGGCCCCGAGATCTGGTTGACCAAGGTAGGAGT-------GGTT---ACCAAAGAC---------ACAAACCACCCAGC--GAAGAA------A--------AATAC-------------------------------------------CTTATTTCGATTTAAAGCATTAT---TTCCGGAAGTTCTT---TGCATACCCTCGCATATTTTCTCTAGTTACTTAAGCGTAG-----------------TTTTAAGAG-----------TTT--TAT----TTCGTTACGTTTATC--ATAGAGTTTAGAGCTCGAGTTTT-GTT--CAGGCTGCCTAGAT--TTAAGCTCG-GCT-----------------CAGCTGCC------------CTAAGTTGTGTTCCAT------------
droKik1 scf7180000302277:454008-454297 + CCATACACCTCATATCGGCTGTGCTGGGGCCCGAGATTTGGCTGACCAAGGTAGGAGA-------GGG-------GTCTTA-----------------AAGATT--CCCCGC------A-G------------------------------GTTGA--------------------------------AGTTCTTTGT---TTCCGGAAGTTTTT---TGCGTTTCCCT-ATTACTTTTATTGGATATTTAAGCGTAC-----------------TTTTAAGAG-----------CGT--TATTATTTTCGTTACGTTTACA--TTAGAGCTTAGAGTTGAAGTTCC-ATTTATAGGATGCTTAGGC--TTAAGCTAG-GCATTTGCAGCTCTGCCCAGCGGCTGCC------------TTAAGTTCTGTTCTGTTGAGTTCTAGTC
droAna3 scaffold_13266:16678742-16678946 - CCATACACCTGGTGTCGGCTGTGCTGGGTCCCGAGTTCTGGCTAACGAAGGTAGGAGT-------GGTT---CCAAGAGGG-----------------AGCAGT--GA-----------------------------------------------------------------------------TTTAGAGAATTAT---TAGC------------------------------------------CCTAAGAGTAA------------------TTTAAGAT-----------TCT--GTT----ATTGTTACGTTTATA--TTAGAGTTTAGAGTTGGCGTTTC-GTT-GTAGGATGCTTAGGA--TTAAGCTAGAGAT-----------------CAGTT-----------------GAGTTCTGTT----------------
droBip1 scf7180000396384:788178-788400 - CCATTCACCTGGTGTCGGCTGTGCTGGGTCCCGAGTTCTGGCTAACCAAGGTAGGAGT-------GGCT---CCGACGGAG-----------------AGCACT--GCAGAG------C----------------------------------------------------------------------------------------------------------CTCTTTAGTT--------T-TTTTTTTGTATAT-----------------TTTTAAGAGTAATTTAAGATTCT--GTT----ATTGTTACGTTTATATTTTAGAGTTTAGAGTTGGCGTTTC-GTT-ATAGGATGCTTAGGA--TTAAGCTCG-GCA-----------------C-----TC------------ATAAGTTCTGTTCTAG------------
dp5 3:8216148-8216460 - CCATTCATCTGGTGTCGGCGATACTGGGTCCTGAGTTCTGGCTGACCAAGGTAGGCGT-------GGG-------AACGCA-----------------CAGGCC--GTGGAC------G-G------------------------------GCTTAAAGCCCGTTTAATGATACTCCAATCGCGTTTTAAAGCATTCTCCATTCCGGAAGTTCTT---TGCGTTTCTTTTTAGTT--------TCTTTTTTTGTTTCCTT--TTTATATTTAGATCGTTAAGAC-----------TATG-TAT---ATTCTATCCATTTAGC--ATAGAGTTTATAGTTCAAGTTGCTG-----TCGCTGCAGCGGAGCTTAAGCTGCTGCT-----------------CCGTTGCCACTAATGCCGCATTAAGTTCTGTTCTAG------------
droPer2 scaffold_4:2096292-2096604 - dpe_1574 CCATTCATCTAGTGTCGGCGATACTGGGTCCTGAGTTCTGGCTAACCAAGGTAGGCGT-------GGG-------AACGCA-----------------CAGGCC--GTGGAC------G-G------------------------------GCTTAAAGCCCGTTTAATGATACTCCAATTTCGTTTTAAAGCATTCTCCATTCCGGAAGTTCTT---TGCGTTTCTTTTTAGTT--------TCTTTTTTTGTTTCCTT--TTTATATTTAGATCGTTAAGAC-----------TATG-TAT---ATTCTATCCATTTAGC--ATAGAGTTTATAGTTCAAGTTGCTG-----TCGCTGCAGCGGAGCTTAAGCTGCTGAT-----------------CCGTTGCCACTAATGCCGCATTAAGTTCTGTTTTAG------------
droWil2 scf2_1100000004382:541236-541479 - CCATACATCTGATATCGGCGGCATTGGGTCCAGAGATATGGTTGACCAAGGTAGGCAA-------AAAT---CTGAAATTATAAAAAAACTTAAACCAAAAAGA--AGAGAACAAAATAT-TTATG-----------------------------------------------------TATTTATTT-ATAATTTCT---TTCCGGAAGTTCTT---TGCATTTATATTCAG--------TTCTTATATAAGTTTCTCTTCTTTTTTTCTAAATTGTTTAAGC-----------T----------------TATATTTAGA--ATAGAA---------------------------------------------------------------------AACATATT------------TTTATTTTACATCAAT------------
droVir3 scaffold_13324:2577298-2577488 - CTATACATTTGGTCTCAGCCGTGCTGGGGCCCGAGATTTGGCTGACGAAGGTAAGCCATCTGGGTGG-------------------------------------------AT------TG-CCATGTTGCTCATATCTTCCATCTTTGTATAAATAATCCC---CTAATAATA--TTGATTTCGTTTTAAATTGAGAT---TTTCAGAAGTTAT--------------------------------------------------------------------AT-----------TTT--AAA----TTTAAATCGCCTATT--TTAGACTATAGA---------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:26294452-26294506 + CCATACACTTAGTTTCCGCTATTTTAGGGCCGGAGATTTGGTTGACCAAGGTAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15112:4934799-4934853 - CCATACATTTGGTTTCGGCTGCCCTGGGACCCGAAGTCTGGCTGACGAAGGTAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCATTCACTTGGTTTCGGCTGCACTGGGTCCTGAGATCTGGCTGACCAAGGTAGGCGA-------GGTT---CTGAAGGCG-----------------CCCAGC--GAAGAT--------------------------------------------------------------------------------CATTGC---TACCGGAACTTCTT---TGCATACCCTTTAATTATTTCTGTAGTTATGTAAGCATAT-----------------TCTTAAGAG-----------TTT--TAT----TTCGTTACGTTTATC--CTAGAGTTTAGAGTTCGAGTTTTTGTT--TAGGCTGCTTAGGT--TTAAGCTCG-GCT-----------------CGGCTACC------------TTAAGTTCTGTTCAAT------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..ATTCACTTGGTTTCGGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
...........GTTTCGGCTGCACTGGGTCCTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
...............CGGCTGCACTGGGTCCTGAGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
........................TGGGTCCTGAGATCTGGCTGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...........................GTCCTGAGATCTGGCTGACCAA..............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
.........................................................................................................................................................................................................................................................................................................................................GTTTAGAGTTCGAGTTTTTGT.................................................................................................2111.00100100000000000000
............................................................................................................AGAT--------------------------------------------------------------------------------CATTGC---TACCGGAACTTC..........................................................................................................................................................................................................................................2211.00100001000000000000
..................................................GTAGGCGA-------GGTT---CTGAAGGCG-----------------.............................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
............................TCCTGAGATCTGGCTGACC................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
............TTTCGGCTGCACTGGGTCC................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.CATTCACTTGGTTTCGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...TTCACTTGGTTTCGGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
droSec2
CCATTCACTTGGTTTCGGCTGCACTGGGTCCTGAGATCTGGCTCACCAAGGTAGGCGA-------GGTT---CTGAAGGCG-----------------CCCAGC--GAAGAT--------------------------------------------------------------------------------GAGTGC---TACCGGAACTTCTT---TGCATACCCTTTAATTATTTCAGTAGTTATGTAAGCATAT-----------------TCTTAAGAG-----------TTT--TAT----TTCGTTACGTTTATC--CTAGAGTTTAGAGGTCGAGTTTTTGTT--TAGGCTGCTTAGGT--TTAAGCTCG-GCT-----------------CGGCTACC------------TTAAGTTCTGTTCAAT------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................TGCACTGGGTCCTGAGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
................................GAGATCTGGCTCACCAAGGTAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
.....CACTTGGTTTCGGCTGCACTGGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
...................................................TAGGCGA-------GGTT---CTGAAGGCG-----------------C............................................................................................................................................................................................................................................................................................................................................................2111.0010100
........................................................................CTGAAGGCG-----------------CCCAGC--GAAGAT--------------------------------------------------------------------------------...............................................................................................................................................................................................................................................................2111.0010010
......................................................................................................................................................................................................................................AATTATTTCAGTAGTTATGT.....................................................................................................................................................................................................2011.0010010
................GGCTGCACTGGGTCCTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
..ATTCACTTGGTTTCGGCTGCACTGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
......................................................................................................................................................................................................................................................................................TAAGAG-----------TTT--TAT----TTCGTTACG...................................................................................................................................2111.0011000
dm3
CCATTCATTTGGTTTCGGCTGCACTGGGTCCTGAGATCTGGCTCACCAAGGTAGGCGA-------GGTT---CTGAGGGCG-----------------ACCAGC--GAAGAT--------------------------------------------------------------------------------CATTGT---TACCGGAACTTCTT---TGCATATCCTTTAATTATTTCTGTAGTTATGTAAGCATAT-----------------TCTTAAGAG-----------TTC--TAT----TTCGTTACGTTTATA--CTAGAGTTTAGAGTTCGAGTTTC-GTT--TAGGCTGCTTAGGA--TTAAGCTCG-GCT-----------------CGGCTAGC------------TTAAGTTTTGTTCAAT------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................TGGGTCCTGAGATCTGGCTCACCAA..............................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAGGCGA-------GGTT---CTGAGGG................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGGTTTCGGCTGCACTGGGTCCTGAGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGGTTTCGGCTGCACTGGGTCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000
..................CTGCACTGGGTCCTGAGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAGGCGA-------GGTT---CTGAGG.................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000
........................................................................CTGAGGGCG-----------------ACCAGC--GAAGAT--------------------------------------------------------------------------------C..............................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................ACCAAGGTAGGCGA-------GGTT---CTGAGGGC...............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................ACTGGGTCCTGAGATCTGGCTCACCAA..............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCTTAAGAG-----------TTC--TAT----TTG.........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...TTCATTTGGTTTCGGCTGCACTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................ACTGGGTCCTGAGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ACTGGGTCCTGAGATCTGGCTCAC.................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CCAAGGTAGGCGA-------GGTT---CTGAGGGC...............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACTGGGTCCTGAGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTGGTTTCGGCTGCACTGGGTCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGCACTGGGTCCTGAGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CGA-------GGTT---CTGAGGGCG-----------------ACCAGC--.....................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCTGCACTGGGTCCTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCTGCACTGGGTCCTGAGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....TCATTTGGTTTCGGCTGCACTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CTTAAGAG-----------TTC--TAT----TTCGTTACGTTTAT..............................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTCGGCTGCACTGGGTCCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................T---CTGAGGGCG-----------------ACCAGC--GAAGA................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
............................................................................................................................................................................................................................................................................................................................................TAGAGTTCGAGTTTC-GTT--TAGGCTGCT.....................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCACTGGGTCCTGAGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CTGAGGGCG-----------------ACCAGC--GAAGAT--------------------------------------------------------------------------------CATTGT---......................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................CGA-------GGTT---CTGAGGGCG-----------------ACCAGC--GA...................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................ACTGGGTCCTGAGATCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGGTTTCGGCTGCACTGGGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........TTGGTTTCGGCTGCACTGGGTCCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCTGCACTGGGTCCTGAGATCTGGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................G-----------------ACCAGC--GAAGAT--------------------------------------------------------------------------------CATTGT---TACCGGA...............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGAGATCTGGCTCACCAAGA............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATA--CTAGAGTTTAGAGTT............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TGAGGGCG-----------------ACCAGC--GAAGAT--------------------------------------------------------------------------------CATTGT---......................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................GCTTAGGA--TTAAGCTCG-GCT-----------------CGGCT...........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGGTTTCGGCTGCACTGGGTCC................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCACTGGGTCCTGAGATCTGGCTCACC................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TAGGA--TTAAGCTCG-GCT-----------------CGGCTAGC------------TT..........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................T---CTGAGGGCG-----------------ACCAGC--GAAGAT--------------------------------------------------------------------------------C..............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................GGGTCCTGAGATCTGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTTC-GTT--TAGGCTGCTTAGGA--TTAAGC........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................T----TTCGTTACGTTTATA--CTAGAGTT...................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CG-GCT-----------------CGGCTAGC------------TTAAGTTTT...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTGCACTGGGTCCTGAGATCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTGCACTGGGTCCTGAGATCT........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTCGGCTGCACTGGGTCCTGAGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTCGGCTGCACTGGGTCCTGAGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTGCACTGGGTCCTGAGATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCGTTACGTTTATA--CTAGAG.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATA--CTAGAGTTTAGAGTTCGA.........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TCACCAAGGTAGGCGA-------GGTT---CTGAGGGC...............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................GGCTGCACTGGGTCCTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTAGC------------TTAAGTTTTGTTCAAT------------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTCGGCTGCACTGGGTCCTGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTCATTTGGTTTCGGCTGCACTGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CTGGGTCCTGAGATCTGGCTCACC................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTCGGCTGCACTGGGTCCTGAGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCTGCACTGGGTCCTGAGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................CCTGAGATCTGGCTCACCAAGGTAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGAGTTCGAGTTTC-GTT--T.............................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAGGCGA-------GGTT---CTGAATC................................................................................................................................................................................................................................................................................................................................................................................19120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GTTTATA--CTAGAGTTTAA................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droEre2
CAATTCATCTGGTTTCGGCTGCACTGGGTCCTGAGATCTGGCTCACCAAGGTAGGGGA-------GGTTCGCCCGGAGGCG-----------------CCCGGC--GAAGAT------A-----------------------------------------------------------------CTTTAAAGCATTGT---TTCCAGAACTTCTT---TGCATATCCTATAATTATTTCCTTAGATATGTAAGCATAT-----------------ATTTAAGAG-----------TTT--TAT----TTCGTTACGTTTATC--CTAGAGTTTAGAGTTCGAGTTTC-GTT--TAGGCTGCTTAGGA--TTAAGCTCG-GCT-----------------CAGCTGCC------------TTAAGTTCTGTTCTAT------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....CATCTGGTTTCGGCTGCACTGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
................GGCTGCACTGGGTCCTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..ATTCATCTGGTTTCGGCTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
......ATCTGGTTTCGGCTGCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
...............................TGAGATCTGGCTCACCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.............TTCGGCTGCACTGGGTCCTGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.....................................................................CGCCCGGAGGCG-----------------CCCGGC--GAAGAT------.........................................................................................................................................................................................................................................................................................................................................2411.0010100000
....TCATCTGGTTTCGGCTGCACTGGGTCC................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.........TGGTTTCGGCTGCACTGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
droYak3
CCATTCATCTGGTTTCGGCGGCACTGGGTCCTGAGATCTGGCTCACCAAGGTAGGGGA-------GGTT---CCGAAGGCG-----------------TCCGGC--GAAGAT------A-----------------------------------------------------------------ATTTAAAGTATTGT---TTCCGGTACTTCTT---TGCATACCCTATATTTATTTCATTAGATATGTAAGCATAT-----------------GTTTAAGAG-----------TTT--TAT----TTCGTTACGTTTATC--CTAGAGTTTAGAGTTCGAGTTTT-GTT--TAGGCTGCTTAGGA--TTAAGCTCG-GCT-----------------CGGCTGCC------------TTAAGTTCTGTTCTAT------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................G-----------TTT--TAT----TTCGTTACGTTTATC--CTAGAGT....................................................................................................................2911.00100000010000
........................................................................................................................................................................................................................................................................................................TT--TAT----TTCGTTACGTTTATC--CTAGA......................................................................................................................2511.00100000010000
...........GTTTCGGCGGCACTGGGTCCTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
..........................................................................................................GAAGAT------A-----------------------------------------------------------------ATTTAAAGTAT............................................................................................................................................................................................................................................................1811.00100100000000
.....CATCTGGTTTCGGCGGCACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..ATTCATCTGGTTTCGGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEug1
CCATTCATCTGATATCGGCTGCGCTGGGTCCCGAGATCTGGCTGACAAAGGTAGGAGA-------GGTT---CTAAAGGCA-----------------ACCAGC--GAAGAA------TC-TGAAAT--------------------------------------------------AATTTCGATTTAAAACATTAT---TCCCGGAAATT-TT---TGTATACCCTTTTATATTTTCTATAGACATTTAAGCATAT-----------------CTGTAAGAG-----------TTT--TAT----TTTGCTACGTTCACA--TTAGAGTTTGGAGTTCGATTTTC-ATG--TAGGCTGCCTAGGA--TTAAGCTCG-GCT-----------------CAGTTGCC------------TTAAGTTCTGTTTTAT------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCATTCATCTGGTATCAGCTGTGCTAGGCCCTGAGATCTGGCTGACCAAGGTAGAAGA-------GGTT---CTGAAGGCA-----------------CCCAGC--GAGGAC------CT-TCGAGTAACTC--------------------------------------------CTATT---TTTTAGTGCATTAT---TTCCGGAAGTTCTT---TGCATTCCTTTTTATTT---------ATATATAAGCATAT-----------------TTTTAAGAG-----------TTA--TAT----TTCGTTACGTTTAGC--GTAGACTTTAGCGTTCGAGATTC-ATA--CAGGATGCTTTGAA--TTAAGCTTG-GCT-----------------AGGATGCC------------CTTAGTTCCGTTTAGT------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCATTCACCTGGTGTCCGCTGTGCTGGGTCCTGAGATCTGGCTGACCAAGGTATGAGA-------GGTT---CTGAGGGCA-----------------CCCTAACTGGAGAC---------CGGTT-----------------------------------------------------TTTCGATTTATAGCATTAT---TTCCGGAAGTTCTT---TAGATTCCCCCTTATATTTTACTTAGATATTTAAGCGTAT-----------------TTCTAAGAG-----------TTT--TAT----TTCGTTACGTTTACC--ATAGAGTTTAGAGCTCGAGTTTT-ACT--TAGGCTGCTTCGGA--TTGAGCTCG-TCT-----------------CAGATGCC------------TTAAGTTCTGTTCAGT------------SizeHit CountTotal NormTotal
No Reads
droEle1
CCATTCACCTGGTGTCGGCTGTGCTGGGCCCTGAGATCTGGTTGACTAAGGTAGGAGT-------GGTA---CCGAAGTCA-----------------CCCCAC--GAAGAT------CC-TCGAATAA-------------------------------------------------------------TTAATTAT---TCCC-GAAGTTTTTTTTCGCATACCCTTTTATATTTTCTTTAGATAATTAAGCGTAT-----------------TTTTAAGAG-----------TTT--TAT----TTCGTTACGTTAACA--TTAGAGTTTAGAGTTGGAGTTTC-ATT--TAGGCTGCTTAGAA--TTAAGCTCG-GCT-----------------CAGCTGCC------------TTAAGTTTCGTTCTTG------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCATTCACCTAGTGTCTGCCGTGCTCGGTCCTGAGATCTGGTTGACTAAGGTAGGAGT-------GGTT---CCGAAGTCA-----------------CCCCAC--GAGGAC------CC-TCGAATTACAC-------------------------------------------CTAATTT----------TGATAA---TTTCGGAAGATTTT---TGCATACCCTTTAATATTTTCTTTAGATATTTAAGCGTAT-----------------TTTTAAGAG-----------TTTTTTAT----TTCGTTACGTTAACA--TTAGAGTTTAGAGCTCGAGTTTC-ATT--TAGGCTGCTTAGGA--TTAAGCTCG-GCT-----------------CAGCTGCC------------TTAAGTTTTG------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CCATTCACCTGGTGTCCGCTGCTCTGGGCCCCGAGATCTGGTTGACCAAGGTAGGAGT-------GGTT---ACCAAAGAC---------ACAAACCACCCAGC--GAAGAA------A--------AATAC-------------------------------------------CTTATTTCGATTTAAAGCATTAT---TTCCGGAAGTTCTT---TGCATACCCTCGCATATTTTCTCTAGTTACTTAAGCGTAG-----------------TTTTAAGAG-----------TTT--TAT----TTCGTTACGTTTATC--ATAGAGTTTAGAGCTCGAGTTTT-GTT--CAGGCTGCCTAGAT--TTAAGCTCG-GCT-----------------CAGCTGCC------------CTAAGTTGTGTTCCAT------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCATACACCTCATATCGGCTGTGCTGGGGCCCGAGATTTGGCTGACCAAGGTAGGAGA-------GGG-------GTCTTA-----------------AAGATT--CCCCGC------A-G------------------------------GTTGA--------------------------------AGTTCTTTGT---TTCCGGAAGTTTTT---TGCGTTTCCCT-ATTACTTTTATTGGATATTTAAGCGTAC-----------------TTTTAAGAG-----------CGT--TATTATTTTCGTTACGTTTACA--TTAGAGCTTAGAGTTGAAGTTCC-ATTTATAGGATGCTTAGGC--TTAAGCTAG-GCATTTGCAGCTCTGCCCAGCGGCTGCC------------TTAAGTTCTGTTCTGTTGAGTTCTAGTCSizeHit CountTotal NormTotal
No Reads
droAna3
CCATACACCTGGTGTCGGCTGTGCTGGGTCCCGAGTTCTGGCTAACGAAGGTAGGAGT-------GGTT---CCAAGAGGG-----------------AGCAGT--GA-----------------------------------------------------------------------------TTTAGAGAATTAT---TAGC------------------------------------------CCTAAGAGTAA------------------TTTAAGAT-----------TCT--GTT----ATTGTTACGTTTATA--TTAGAGTTTAGAGTTGGCGTTTC-GTT-GTAGGATGCTTAGGA--TTAAGCTAGAGAT-----------------CAGTT-----------------GAGTTCTGTT----------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........TGGTGTCGGCTGTGCTGGGTCC................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..ATACACCTGGTGTCGGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.CATACACCTGGTGTCGGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................GTCCCGAGTTCTGGCTAAC.................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.....CACCTGGTGTCGGCTGTGCTGGGTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
droBip1
CCATTCACCTGGTGTCGGCTGTGCTGGGTCCCGAGTTCTGGCTAACCAAGGTAGGAGT-------GGCT---CCGACGGAG-----------------AGCACT--GCAGAG------C----------------------------------------------------------------------------------------------------------CTCTTTAGTT--------T-TTTTTTTGTATAT-----------------TTTTAAGAGTAATTTAAGATTCT--GTT----ATTGTTACGTTTATATTTTAGAGTTTAGAGTTGGCGTTTC-GTT-ATAGGATGCTTAGGA--TTAAGCTCG-GCA-----------------C-----TC------------ATAAGTTCTGTTCTAG------------SizeHit CountTotal NormTotal
No Reads
dp5
CCATTCATCTGGTGTCGGCGATACTGGGTCCTGAGTTCTGGCTGACCAAGGTAGGCGT-------GGG-------AACGCA-----------------CAGGCC--GTGGAC------G-G------------------------------GCTTAAAGCCCGTTTAATGATACTCCAATCGCGTTTTAAAGCATTCTCCATTCCGGAAGTTCTT---TGCGTTTCTTTTTAGTT--------TCTTTTTTTGTTTCCTT--TTTATATTTAGATCGTTAAGAC-----------TATG-TAT---ATTCTATCCATTTAGC--ATAGAGTTTATAGTTCAAGTTGCTG-----TCGCTGCAGCGGAGCTTAAGCTGCTGCT-----------------CCGTTGCCACTAATGCCGCATTAAGTTCTGTTCTAG------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....CATCTGGTGTCGGCGATACTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........GGTGTCGGCGATACTGGGTCCTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................CGATACTGGGTCCTGAGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................GATACTGGGTCCTGAGTTCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
........................TGGGTCCTGAGTTCTGGCTGACCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..........GGTGTCGGCGATACTGGGTCCTGAGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
...........................GTCCTGAGTTCTGGCTGAC.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............GTCGGCGATACTGGGTCCTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................GATACTGGGTCCTGAGTTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................GATACTGGGTCCTGAGTTCTGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...TTCATCTGGTGTCGGCGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
CCATTCATCTAGTGTCGGCGATACTGGGTCCTGAGTTCTGGCTAACCAAGGTAGGCGT-------GGG-------AACGCA-----------------CAGGCC--GTGGAC------G-G------------------------------GCTTAAAGCCCGTTTAATGATACTCCAATTTCGTTTTAAAGCATTCTCCATTCCGGAAGTTCTT---TGCGTTTCTTTTTAGTT--------TCTTTTTTTGTTTCCTT--TTTATATTTAGATCGTTAAGAC-----------TATG-TAT---ATTCTATCCATTTAGC--ATAGAGTTTATAGTTCAAGTTGCTG-----TCGCTGCAGCGGAGCTTAAGCTGCTGAT-----------------CCGTTGCCACTAATGCCGCATTAAGTTCTGTTTTAG------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............GTCGGCGATACTGGGTCCTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
..ATTCATCTAGTGTCGGCGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
................GGCGATACTGGGTCCTGAGTTCTGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
.CATTCATCTAGTGTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
................GGCGATACTGGGTCCTGAGTTCTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.CATTCATCTAGTGTCGGCGATACT......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................CTGGGTCCTGAGTTCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................1820.501001000
droWil2
CCATACATCTGATATCGGCGGCATTGGGTCCAGAGATATGGTTGACCAAGGTAGGCAA-------AAAT---CTGAAATTATAAAAAAACTTAAACCAAAAAGA--AGAGAACAAAATAT-TTATG-----------------------------------------------------TATTTATTT-ATAATTTCT---TTCCGGAAGTTCTT---TGCATTTATATTCAG--------TTCTTATATAAGTTTCTCTTCTTTTTTTCTAAATTGTTTAAGC-----------T----------------TATATTTAGA--ATAGAA---------------------------------------------------------------------AACATATT------------TTTATTTTACATCAAT------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................ATTGGGTCCAGAGATATGGTTGA..................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200110
..................................................GTAGGCAA-------AAAT---CTGAAA.................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
................................GAGATATGGTTGACCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.CATACATCTGATATCGGCGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.................GCGGCATTGGGTCCAGAGATATG.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
........CTGATATCGGCGGCATTGGGTCCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...................................................................................................................................................................................................................................ATTCAG--------TTCTTATATAAGT.................................................................................................................................................................................................1911.00100010
droVir3
CTATACATTTGGTCTCAGCCGTGCTGGGGCCCGAGATTTGGCTGACGAAGGTAAGCCATCTGGGTGG-------------------------------------------AT------TG-CCATGTTGCTCATATCTTCCATCTTTGTATAAATAATCCC---CTAATAATA--TTGATTTCGTTTTAAATTGAGAT---TTTCAGAAGTTAT--------------------------------------------------------------------AT-----------TTT--AAA----TTTAAATCGCCTATT--TTAGACTATAGA---------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................AGCCGTGCTGGGGCCCGAGATTTGGCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AATTGAGAT---TTTCAGAAGTTAT--------------------------------------------------------------------AT-----------T.......................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
.....................TGCTGGGGCCCGAGATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
................AGCCGTGCTGGGGCCCGAGATTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
..ATACATTTGGTCTCAGCCGTGCTGGGGCCCGAGATTTGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................4111.001000000000000000000000000000000000000000000000000000000100000000
..............TCAGCCGTGCTGGGGCCCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................................................................................................AATCGCCTATT--TTAGACTATA.................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CGTTTTAAATTGAGAT---TTTCAGAA..............................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........GTCTCAGCCGTGCTGGGGCCCGAGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000100000000000000000000000000
...............CAGCCGTGCTGGGGCCCGAGATTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
CCATACACTTAGTTTCCGCTATTTTAGGGCCGGAGATTTGGTTGACCAAGGTAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................CGCTATTTTAGGGCCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................GATTTGGTTGACCAAGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................1920.501100000
droGri2
CCATACATTTGGTTTCGGCTGCCCTGGGACCCGAAGTCTGGCTGACGAAGGTAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:27 AM