ID:

dsi_15332

 Coordinate:

3r:2132048-2132197 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-47.9 -47.9 -47.9

Flybase annnotation

exon [3r_2132198_2132692_-]; five_prime_UTR [3r_2132198_2132692_-]; intron [3r_2120472_2132197_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGGACAGCGAGAGAGCGGGTGGCTGCACCTTCATAACTGTTGTTGCAAAGGTGAGTGCGTGCCGAATATTGTTTTTGGTTCAGAATTGTTTATTTAAGTGTACTCTCAACCAGGCCAACACACTCACAACCACACGCCCGCACGTACCTGCGACCCACGAACGTGTGTGTGCGTGTGTGTTGGCCTGCCTGCTTATTTTTTATGCGGAAAAAACACTGATCCAAACTTTTTCGGGCCTCAAGAACCTCAT
**************************************************..(((((((.((((((.......))))))...................))))))).((..(((((((((((((.((((..((((((..((..(((....))).....))..))))))))))...)))))))))))))..)).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
.......CGAGAGAGCGGGTGGCTGC................................................................................................................................................................................................................................ 19 0 1 2.00 2 0 2 0 0 0 0
............................................GCAAAGGTGAGTGCGTGCC........................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
..........GAGAGCGGGTGGCTGCACC............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................AAACTTTTTCGGCCTTCAAGA....... 21 2 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................CCCGCACGTACCTGCGACCCACGAACG....................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0
......................................GTTGTTGCAAAGGTGAGTG................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................GACCCACGAACGTGTGTGTGCGTGTG......................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................AACTTTTTCGGCCTTCAAGAT...... 21 3 3 0.33 1 0 0 0 0 1 0
.................................................................................................................................................................................................TATTTTTGATGCGGAA......................................... 16 1 6 0.17 1 1 0 0 0 0 0
....................................................................TCGTTTTTGGATCAGAATTGGTT............................................................................................................................................................... 23 3 7 0.14 1 0 0 0 0 1 0
.............................................................................................................................................................................................................................TAAACTTTTTCGGCCTTCAAG........ 21 3 9 0.11 1 0 0 0 0 0 1
................................................AGGTGAGTGCGTGTAGAACA...................................................................................................................................................................................... 20 3 10 0.10 1 0 1 0 0 0 0
.........................................GTTGCAAAGCTGAGTCC................................................................................................................................................................................................ 17 2 11 0.09 1 1 0 0 0 0 0
..........................................................................TTGGATCAGACTTCTTTATT............................................................................................................................................................ 20 3 19 0.05 1 0 0 0 0 1 0
...................................ACTATGGTTGCAAAGCTGA.................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1
...................................................................TTTGATTTTGGTTCAGAA..................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

GCCTGTCGCTCTCTCGCCCACCGACGTGGAAGTATTGACAACAACGTTTCCACTCACGCACGGCTTATAACAAAAACCAAGTCTTAACAAATAAATTCACATGAGAGTTGGTCCGGTTGTGTGAGTGTTGGTGTGCGGGCGTGCATGGACGCTGGGTGCTTGCACACACACGCACACACAACCGGACGGACGAATAAAAAATACGCCTTTTTTGTGACTAGGTTTGAAAAAGCCCGGAGTTCTTGGAGTA
**************************************************..(((((((.((((((.......))))))...................))))))).((..(((((((((((((.((((..((((((..((..(((....))).....))..))))))))))...)))))))))))))..)).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body
...............................................................................................................................................................................................................................TTGAAAAAGCCGGGAGTTCTA...... 21 2 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................................................................ATGGACGCCGGGTGCT.......................................................................................... 16 1 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................................................................................TGGACGCCGGGTGCT.......................................................................................... 15 1 7 0.43 3 3 0 0 0 0 0 0 0
............................................................................................AAATTCAGATGAGAGT.............................................................................................................................................. 16 1 3 0.33 1 0 0 1 0 0 0 0 0
.........................................................................................................TTTTGGTCCGGTTGTGTGAGT............................................................................................................................ 21 2 3 0.33 1 0 1 0 0 0 0 0 0
.......................................................................................................AAAGTTGTTCCGGTTGTGTGAT............................................................................................................................. 22 3 4 0.25 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................AGCCCGGAGGTCATGGA... 17 2 8 0.25 2 0 0 0 1 1 0 0 0
..............................................................................................................................................GCTTGGACGCCGGGTGCT.......................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0
...........................................................................................................................................AGTGCTTGGACGCTGG............................................................................................... 16 2 20 0.20 4 0 0 3 0 1 0 0 0
..................................................................................................................................................................................................................................AAAAAGCCGGGAGTTCTA...... 18 2 5 0.20 1 1 0 0 0 0 0 0 0
............................................................................................................TGGGCCGGTTGTGTGA.............................................................................................................................. 16 1 6 0.17 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AAGCCCGGAGGTCATGG.... 17 2 6 0.17 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................AAGCCCGGAGGTCATG..... 16 2 20 0.15 3 0 0 0 0 2 0 1 0
........................................................................................................................................................TCGCTGCGTGCACACACACGCA............................................................................ 22 3 7 0.14 1 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................GAAAAAGGCTGGAGTTCTT...... 19 2 7 0.14 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................GGTGCTTGCACCCACGC............................................................................... 17 2 7 0.14 1 0 0 1 0 0 0 0 0
..CTGTCGCTTTCCTGCCCAC..................................................................................................................................................................................................................................... 19 3 11 0.09 1 1 0 0 0 0 0 0 0
...........................................................................................................................................CGTGCTTGGTCGCTGGGAG............................................................................................ 19 3 19 0.05 1 0 0 0 0 1 0 0 0
......................................................CACGCGCGGCTGAGAACA.................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 1
.....................................................................ACAAAAACGAAGTCT...................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:2131998-2132247 - dsi_15332 CGGACAGC-----------------GAGAGAG---------------CGG-GTG---GCTGCACCTTCAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTTTGGTT---------CAGAATTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AGGCCAACACACTCACAACC----------------------------------ACACGCCCGCACGT----------------ACCTGCG-ACCCACGA-ACGTGTGTGTGCGTGTGT--------GT---------------TGGCCTGC----CTGCTTATTTTTTATGCGGAAAAAA------------CACTGATCCAAACTTT-----------------------TTCGGGCCTCAAGAACCTCAT----
droSec2 scaffold_6:2315966-2316215 - CGGACAGC-----------------GAGAGAG---------------CGG-GTG---GCTGCACCTTCAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTTTGGTT---------CAGAATTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AGGCCAACACACTCACAACC----------------------------------ACACGCCCGCACGT----------------ACCTGCG-ACCCACGA-ACGTGTGTGTGCGTGTGT--------GT---------------TGGCCTGC----CTGCTTATTTTTTATGCGGAAAAAA------------CACTGATCCAAACTTT-----------------------TTCGGGCCTCAAGAACCTCAT----
dm3 chr3R:2230900-2231152 - CGGTCAGC-----------------GAGAGAG---------------CGG-GTGGCTGCTGCACCTTCAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTTTGGTT---------CAGAATTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AGGCCAACACACTCACAACC----------------------------------ACACGCCCGCACGT----------------ACCTGCG-ACCCACGA-ACGTGTGTGTGCGTGTGT--------GT---------------TGGCCTGC----CTGCTTATTTTTTATGCGGAAAAAA------------CATTGATCCAAACTTT-----------------------TTCGGGCCTCAAGAACCTCAT----
droEre2 scaffold_4770:2476649-2476908 - CGGACAGCCAGAAAGC------AGAGAGAGAG---------------CGG-GTG---GCTGCACCTCCAC---------------------AACTCT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTTCGGTT---------CAGAGTTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AGGCCAACACACTCACAACC----------------------------------ACACGCCCGCACGT----------------ACCTGCG-GGCCACGA-ACGTGTGTGTGCGTGTGT--------GT---------------TCGCCTGC----CTGCTTATTTTTTAAGCGGAAAAAA------------AACTGATCCAAACTTT------------------------TCGGAGCTCAAGAACCTCAT----
droYak3 3R:18153917-18154169 - GGCAGAG-------------------AGAGAG---------------AGA-GCG---GTTGCACCTCCAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCTGAATATTGTTTTGGGTT---------CAAAATTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AGCCCAAC--ACTCACAACC----------------------------------ACACGGCCGCACGT----------------ACCTGTG-GCCCGCGA-ACGTGTGTGTGCGTGTGT--------GT---------TTGTGTTGGCCAGC----CTGCTTATATTTTATGCGGAAAAAA--A-AA-----ACACTGATCCAAACTTT-----------------------TTCGGGCCTCAAGAAACT-------
droEug1 scf7180000409504:63499-63781 - CGGAGAGTGAGAAAGGAGAGGCA--GTGAGAG---------------CGG-ATG---GCTGCACCTCAAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTT---------CAAAGTTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCGCAACC----AGGCCCACAGACACATAACC----------------------------------ACACGCACTCACGTACATACACTTATATGTACCTGGG-GCCCATGT-TCGTGTGTTTGT--------------GC---------------TGCTCTG-----CTGGTTATTCTTTATGCGGAAAAAAACTGCT-----GGATTGATCCAGAGTTTTTGTT------------------TTCGTTTCTTAAGAACTT-------
droBia1 scf7180000302155:2471344-2471597 + CGGACAGCGAGAGC-------GAGGAAGAGAG---------------CGG-GTG---GCTGCACCTCCAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAAAATTGTTTATAGTT---------CAGAGTTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCATAGCC---------CACA-GCAAACAAGC----------------------------------ACACGCACGCACGT----------------ACCTGGT-GCCCGCGA-GCGTGTGTGTGTGTGTGT--------GT---------------GTGTGTGGTGGCTTGG---TTGTTTGGGCCAAAAAG--CTGAC-----GGATTGCTCCAGAGTTC-----------------------TT--GGCC---AGT-GCTCGC----
droTak1 scf7180000415261:411410-411655 + CGGATAGAGAGAGG-------AA--GAGAGAG---------------AGG-GTG---GCTGCACCTCAAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTT---------CAAAGTTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCACAACC----AGGCCCACAGACACACAAAC----------------------------------ACACGCGCGCACGT----------------ACCTGCG-GCCCATGA-ACGTGTGTCTGT-------------------------------TGGC--------TTGGTAATTTTTTACGCCAAAAAA--CTGAC-----AGATTGATCCAGAGTTT-----------------------T--GGGCC---AGAACATTCT----
droEle1 scf7180000491278:978075-978272 - CGGAGAG-------------------AGAGAG---------------CGG-GTG---GCTGCACCTCAAA---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTT---------CAAAGTTGTTTAAT--------------G----------------------------------------------------------------TGTATTCA------------------------GAACC----------------------------------ACA----CGCACGT----------------ACCAAAA-------AA-ACGTGA-------------------------------------TAGA--------TTGG---TTTTTTATGCGAAGAAAC--CACGGA----ATTTTATCCAGAGTTTTT-T-------------------TTTCAACCTCAATAAC---------
droFic1 scf7180000453910:594075-594336 - CGGTGAAAGAGAGA-------AAGAGAGAGAG---------------CGG-GTG---GCTGCACCTCAAT---------------------AACAGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTC---------CAAAGTGGTTTATTTAA-----------G----------------------------------------------------------------TGTATTCACAACC----TGGCCCACAAACACATAACC----------------------------------ACACGCACTCACGT----------------AACTGTGTGCCCACAA-ACGTGTGTGTGT--------------AA---------------TGGT--------TTGGTAATAATTTATGCCAAAAAAG-CCGAGGGATTGGATTGATCCATGCTTT-----------------------TTGGGGCTTCAAGAACGTTCT----
droKik1 scf7180000302639:579134-579392 + AGAGCGGA-----------------GAGACAG---------------CGGGGTG---GCTGCATTACCGT---TAAAACCGCTGCTGTCGTTATTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTT---------CAAAGTTGCTTATTTAA-----------G----------------------------------------------------------------C-----CAC------------------A------ACCACACCC----------------------------ACACG--CTCACGT----------------ACTTGCG-GTCCACGA-ACGTGTGTGTGTT--------------CTTTTTGTTTT-----AAGGTTGT----ATTTTTGTT---------AACAATT-CTCA----------------AGAGTTTTA-T-TGAAAAAACGTTCGAGTTTTTGGGTTCCCAAAAATTGAT----
droAna3 scaffold_13340:13462133-13462418 - AGAGGAGA-----------------GAGCAAG---------------CGG---G---GGTGAGGCACAAT---------------------AGCTGTTGTTGTTGTTGCCTGCAGCTCAAAGGTGAGTGAGTGAGTGAGAGAGTGAGTGAGTGCGTGCCGAATGTTGTTTGTTGTG---------CCAAGTTGCTTATTTAA-----------GCCTTTGTTGTTGG-CTTT--TAGTTTTTGGTTTTTTCTCTTGTTTTTTTTTTCCTTCTGTTT-TTGGCCCATCAACC----ACACCTATGCCCGCACAGGC----------------------------------ACACACAGGCACGT----------------AACTGCA-GCCCGCAAAACGTGTCTATGCCGGTGTGCGAGTGTGT--------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396615:120254-120557 - AGGAGAGAGCGA-------------------G---------------CGG---GGGTGAGGCAC---AATAGTTGG---CGTTGTCGTCGTTGTTGTTGTTGTTGTTGCCTGCAGCTCAAAGGTGAGTGAGTG------------AGTGAGTGCGTGCCGAATGTTGTTTGTAGTG---------CCAACTTGCTTATTTAA-----------GCCTTTGTTGTTGGTCTTTTTTTTTTTTTGGTTTATTCTCT-GTTTTTTTTTTTCCACTGTTT-TTGGCCCATCAACC----ACACCTATGCACGCACCCCG----------------------------------CCATCCAGGCACGT----------------AACTGCA-GCCCGCAAAACGTGTCTGTGTGTGGGT-------------------------------------TT-------------------------------------------------------------------------------AGTTTAAAAATTTAATTTTT
dp5 2:20157924-20158176 + ATAGCG--------------------GTAAAG---------------CGT-GGGGTAGCTGCA-----------------------------GCGGG---------------CGGTTCAGAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGT----------------TTCTTATTCAAGTGAGCGTTAT-------GTGCATG-CATA--TAGGTATATGT--ATTCATATGTATGTAT-----------ATG-TGGGCCCCAAAC-TACAAAGCAAGAACAACTAAAACCACACCCACACATACTGCTATTGTCCGAACAGTGGGAACACACGCACGT----------------ACCTGCA-GCCCACGT-ATGCACGGGTGTGTGTGT--------GT--------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_3:2902998-2903256 + TAGCG---------------------GTAAAG---------------CGT-GGGGTAGCTGCA-----------------------------GCGGG---------------CGGTTCAGAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTT----------------TCTTATTCCAGTGAGCGTTAT-------GTGCATG-CATA--TGGGTATATGT--ATTCATATGTATGTAT-----------ATG-TGGGCCCCAAAC-TACAAAGCAAGAACAACTAAAACCACACCCACACATACTGCTATTGTCCGAACAGTGGGAACACACGCACGT----------------ACCTGCA-GCCCACGT-ATGCACGGGTGTGTGTGT--------GT---------GTGTGTT----------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:15899640-15899836 + AAGAGAACGTGAGGTGTGTAACA--GGGTCTAATTTTTGTTGTTGCTTCT-TCG---GCTGCAACCCGCT---------------------GCCGG------------------GGCCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTTGGCTTATTTTAGTTTGGTTTATTGTT-----------A----------------------------------------------------------------TGTATGCGCCACA----CAG---------------CCTCACGCACACACAC--------------------ACACACACACAACC----------------AACACCT-ACTCACGT-AC----------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGGACAGC-----------------GAGAGAG---------------CGG-GTG---GCTGCACCTTCAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTTTGGTT---------CAGAATTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AGGCCAACACACTCACAACC----------------------------------ACACGCCCGCACGT----------------ACCTGCG-ACCCACGA-ACGTGTGTGTGCGTGTGT--------GT---------------TGGCCTGC----CTGCTTATTTTTTATGCGGAAAAAA------------CACTGATCCAAACTTT-----------------------TTCGGGCCTCAAGAACCTCAT----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......C-----------------GAGAGAG---------------CGG-GTG---GCTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
....................................................................................................................GCAAAGGT------------------------GAGTGCGTGCC.........................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
...........................GAGAG---------------CGG-GTG---GCTGCACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................CCCGCACGT----------------ACCTGCG-ACCCACGA-ACG.........................................................................................................................................................2711.00100000010000000000
...............................................................................................GT---------------TGTTGCAAAGGT------------------------GAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................G-ACCCACGA-ACGTGTGTGTGCGTGTG...........................................................................................................................................2611.00100000000001000000
droSec2
CGGACAGC-----------------GAGAGAG---------------CGG-GTG---GCTGCACCTTCAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTTTGGTT---------CAGAATTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AGGCCAACACACTCACAACC----------------------------------ACACGCCCGCACGT----------------ACCTGCG-ACCCACGA-ACGTGTGTGTGCGTGTGT--------GT---------------TGGCCTGC----CTGCTTATTTTTTATGCGGAAAAAA------------CACTGATCCAAACTTT-----------------------TTCGGGCCTCAAGAACCTCAT----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................GAGAGAG---------------CGG-GTG---GCTGCACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020020
..............................................................................................TGT---------------TGTTGCAAAGGT------------------------GAGTGCG.............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
...............................................................................................................................................................................................................................................................................................................ACACTCACAACC----------------------------------ACACGCCCG..................................................................................................................................................................................................2111.0011000
......GC-----------------GAGAGAG---------------CGG-GTG---GCTGCACCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.GGACAGC-----------------GAGAGAG---------------CGG-GTG---GCTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
..........................AGAGAG---------------CGG-GTG---GCTGCACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.....AGC-----------------GAGAGAG---------------CGG-GTG---GCTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.........................GAGAGAG---------------CGG-GTG---GCTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGTGTGCGTGTGT--------GT---------------.................................................................................................................19180.0610001
dm3
CGGTCAGC-----------------GAGAGAG---------------CGG-GTGGCTGCTGCACCTTCAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTTTGGTT---------CAGAATTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AGGCCAACACACTCACAACC----------------------------------ACACGCCCGCACGT----------------ACCTGCG-ACCCACGA-ACGTGTGTGTGCGTGTGT--------GT---------------TGGCCTGC----CTGCTTATTTTTTATGCGGAAAAAA------------CATTGATCCAAACTTT-----------------------TTCGGGCCTCAAGAACCTCAT----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................CTGCACCTTCAT---------------------AACTGT---------------TG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AG...............................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.........................GAGAGAG---------------CGG-GTGGCTGCTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000
.....AGC-----------------GAGAGAG---------------CGG-GTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGT--------GT---------------TGGCCTGC----CTGC.................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAGAGAG---------------CGG-GTGGCTGCTGCACCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................ACGA-ACGTGTGTGTGCGTGTGT--------GT---------------T................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGTGTGT--------GT---------------TGGCCTGC----.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GA-ACGTGTGTGTGCGTGTGT--------G.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGTGTGT--------GT---------------TGGCCTGC----.....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GT------------------------GAGTGCGTGCCGAATATT..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................A-ACGTGTGTGTGCGTGTGT--------G.................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................................................................................................................................................................TTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCC..........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CCAACACACTCACAACC----------------------------------ACACG......................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCCAAACTTT-----------------------TTCGGGC..................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................T---------------TGTTGCAAAGGT------------------------GAGTGCG.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................GTTGCAAAGGT------------------------GAGTGCGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
CGGTCAGC-----------------GAGAGAG---------------CGG-GTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................GAGAG---------------CGG-GTGGCTGCTGCACCTTCAT---------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-----------------------TTCGGGCCTCAAGAACCT.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TGT---------------TGTTGCAAAGGT------------------------GAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.GGTCAGC-----------------GAGAGAG---------------CGG-GTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTCAGC-----------------GAGAGAG---------------CGG-GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GG-GTGGCTGCTGCACCTTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAGAGAG---------------CGG-GTGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGCGTGTGT--------GT---------------TGGCCTG..........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....AGC-----------------GAGAGAG---------------CGG-GTGGCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAG---------------CGG-GTGGCTGCTGCACCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................ACTGT---------------TGTTGCAAAGGT------------------------GATC................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CTGT---------------TGTTGCAAAGGT------------------------GAGTGCGT............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......GC-----------------GAGAGAG---------------CGG-GTGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................AGAGAG---------------CGG-GTGGCTGCTGCACCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ACGTGTGTGTGCGTGTGT--------GT---------------TGGCC............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................................................................TCAT---------------------AACTGT---------------TGTTGCAAAGTC------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GCAAAGGT------------------------GAGTGCGTGCCGA.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................................................GTTTTTGGTT---------CAGAATTGTTT....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.GGTCAGC-----------------GAGAGAG---------------CGG-GTGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAGC-----------------GAGAGAG---------------CGG-GTGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGTGTGT--------GT---------------TGGCCTGC----CT...................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................AGGCCAACACACTCACAACC----------------------------------ACACGC.....................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGTCAGC-----------------GAGAGAG---------------CGG-GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................CCTTCAT---------------------AACTGT---------------TGTTGCAAAGTC------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GT------------------------GAGTGCGTGCCGAATATTGTT...............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................TTTTGGTT---------CAGAATTGTTTAT..................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
CGGTCAGC-----------------GAGAGAG---------------CGG-GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ACCTGCG-ACCCACGA-ACGT........................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAGAGAG---------------CGG-GTGGCTGCTGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGCGTGTGT--------GT---------------TGGC.............................................................................................................2240.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000010000000000000000
....................................................................................................................................................................TTGTTTTTGGTT---------CAGAAGC........................................................................................................................................................................................................................................................................................................................................................................1960.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000002000
.....................................................................T---------------------AACTGT---------------TGTTGCAAAGTC------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGTGTGCGTGTGT--------GT---------------T................................................................................................................2060.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGTGTGCGTGTGT--------GT---------------TGG..............................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGCGTGTGT--------GT---------------TGGC.............................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGCGTGTGT--------GT---------------TGGCC............................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGCGTGTGT--------GT---------------TGG..............................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droEre2
CGGACAGCCAGAAAGC------AGAGAGAGAG---------------CGG-GTG---GCTGCACCTCCAC---------------------AACTCT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTTCGGTT---------CAGAGTTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AGGCCAACACACTCACAACC----------------------------------ACACGCCCGCACGT----------------ACCTGCG-GGCCACGA-ACGTGTGTGTGCGTGTGT--------GT---------------TCGCCTGC----CTGCTTATTTTTTAAGCGGAAAAAA------------AACTGATCCAAACTTT------------------------TCGGAGCTCAAGAACCTCAT----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................AGAG---------------CGG-GTG---GCTGCACCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGTGTGCGTGTGT--------GT---------------TCGCC............................................................................................................2411.0010000100
droYak3
GGCAGAG-------------------AGAGAG---------------AGA-GCG---GTTGCACCTCCAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCTGAATATTGTTTTGGGTT---------CAAAATTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCTCAACC----AGCCCAAC--ACTCACAACC----------------------------------ACACGGCCGCACGT----------------ACCTGTG-GCCCGCGA-ACGTGTGTGTGCGTGTGT--------GT---------TTGTGTTGGCCAGC----CTGCTTATATTTTATGCGGAAAAAA--A-AA-----ACACTGATCCAAACTTT-----------------------TTCGGGCCTCAAGAAACT-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................AT---------------------AACTGT---------------TGTTGCAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000
...........................GAGAG---------------AGA-GCG---GTTGCACCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
CGGAGAGTGAGAAAGGAGAGGCA--GTGAGAG---------------CGG-ATG---GCTGCACCTCAAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTT---------CAAAGTTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCGCAACC----AGGCCCACAGACACATAACC----------------------------------ACACGCACTCACGTACATACACTTATATGTACCTGGG-GCCCATGT-TCGTGTGTTTGT--------------GC---------------TGCTCTG-----CTGGTTATTCTTTATGCGGAAAAAAACTGCT-----GGATTGATCCAGAGTTTTTGTT------------------TTCGTTTCTTAAGAACTT-------SizeHit CountTotal NormTotal
No Reads
droBia1
CGGACAGCGAGAGC-------GAGGAAGAGAG---------------CGG-GTG---GCTGCACCTCCAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAAAATTGTTTATAGTT---------CAGAGTTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCATAGCC---------CACA-GCAAACAAGC----------------------------------ACACGCACGCACGT----------------ACCTGGT-GCCCGCGA-GCGTGTGTGTGTGTGTGT--------GT---------------GTGTGTGGTGGCTTGG---TTGTTTGGGCCAAAAAG--CTGAC-----GGATTGCTCCAGAGTTC-----------------------TT--GGCC---AGT-GCTCGC----SizeHit CountTotal NormTotal
No Reads
droTak1
CGGATAGAGAGAGG-------AA--GAGAGAG---------------AGG-GTG---GCTGCACCTCAAT---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTT---------CAAAGTTGTTTATTTAA-----------G----------------------------------------------------------------TGTACTCACAACC----AGGCCCACAGACACACAAAC----------------------------------ACACGCGCGCACGT----------------ACCTGCG-GCCCATGA-ACGTGTGTCTGT-------------------------------TGGC--------TTGGTAATTTTTTACGCCAAAAAA--CTGAC-----AGATTGATCCAGAGTTT-----------------------T--GGGCC---AGAACATTCT----SizeHit CountTotal NormTotal
No Reads
droEle1
CGGAGAG-------------------AGAGAG---------------CGG-GTG---GCTGCACCTCAAA---------------------AACTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTT---------CAAAGTTGTTTAAT--------------G----------------------------------------------------------------TGTATTCA------------------------GAACC----------------------------------ACA----CGCACGT----------------ACCAAAA-------AA-ACGTGA-------------------------------------TAGA--------TTGG---TTTTTTATGCGAAGAAAC--CACGGA----ATTTTATCCAGAGTTTTT-T-------------------TTTCAACCTCAATAAC---------SizeHit CountTotal NormTotal
No Reads
droFic1
CGGTGAAAGAGAGA-------AAGAGAGAGAG---------------CGG-GTG---GCTGCACCTCAAT---------------------AACAGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTC---------CAAAGTGGTTTATTTAA-----------G----------------------------------------------------------------TGTATTCACAACC----TGGCCCACAAACACATAACC----------------------------------ACACGCACTCACGT----------------AACTGTGTGCCCACAA-ACGTGTGTGTGT--------------AA---------------TGGT--------TTGGTAATAATTTATGCCAAAAAAG-CCGAGGGATTGGATTGATCCATGCTTT-----------------------TTGGGGCTTCAAGAACGTTCT----SizeHit CountTotal NormTotal
No Reads
droKik1
AGAGCGGA-----------------GAGACAG---------------CGGGGTG---GCTGCATTACCGT---TAAAACCGCTGCTGTCGTTATTGT---------------TGTTGCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTT---------CAAAGTTGCTTATTTAA-----------G----------------------------------------------------------------C-----CAC------------------A------ACCACACCC----------------------------ACACG--CTCACGT----------------ACTTGCG-GTCCACGA-ACGTGTGTGTGTT--------------CTTTTTGTTTT-----AAGGTTGT----ATTTTTGTT---------AACAATT-CTCA----------------AGAGTTTTA-T-TGAAAAAACGTTCGAGTTTTTGGGTTCCCAAAAATTGAT----SizeHit CountTotal NormTotal
No Reads
droAna3
AGAGGAGA-----------------GAGCAAG---------------CGG---G---GGTGAGGCACAAT---------------------AGCTGTTGTTGTTGTTGCCTGCAGCTCAAAGGTGAGTGAGTGAGTGAGAGAGTGAGTGAGTGCGTGCCGAATGTTGTTTGTTGTG---------CCAAGTTGCTTATTTAA-----------GCCTTTGTTGTTGG-CTTT--TAGTTTTTGGTTTTTTCTCTTGTTTTTTTTTTCCTTCTGTTT-TTGGCCCATCAACC----ACACCTATGCCCGCACAGGC----------------------------------ACACACAGGCACGT----------------AACTGCA-GCCCGCAAAACGTGTCTATGCCGGTGTGCGAGTGTGT--------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................GGCACAAT---------------------AGCTGTTGTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
....................................................................AT---------------------AGCTGTTGTTGTTGTTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
......GA-----------------GAGCAAG---------------CGG---G---GGTGAGGCACAAT---------------------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
....................................................................AT---------------------AGCTGTTGTTGTTGTTGCCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
droBip1
AGGAGAGAGCGA-------------------G---------------CGG---GGGTGAGGCAC---AATAGTTGG---CGTTGTCGTCGTTGTTGTTGTTGTTGTTGCCTGCAGCTCAAAGGTGAGTGAGTG------------AGTGAGTGCGTGCCGAATGTTGTTTGTAGTG---------CCAACTTGCTTATTTAA-----------GCCTTTGTTGTTGGTCTTTTTTTTTTTTTGGTTTATTCTCT-GTTTTTTTTTTTCCACTGTTT-TTGGCCCATCAACC----ACACCTATGCACGCACCCCG----------------------------------CCATCCAGGCACGT----------------AACTGCA-GCCCGCAAAACGTGTCTGTGTGTGGGT-------------------------------------TT-------------------------------------------------------------------------------AGTTTAAAAATTTAATTTTTSizeHit CountTotal NormTotal
No Reads
dp5
ATAGCG--------------------GTAAAG---------------CGT-GGGGTAGCTGCA-----------------------------GCGGG---------------CGGTTCAGAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGT----------------TTCTTATTCAAGTGAGCGTTAT-------GTGCATG-CATA--TAGGTATATGT--ATTCATATGTATGTAT-----------ATG-TGGGCCCCAAAC-TACAAAGCAAGAACAACTAAAACCACACCCACACATACTGCTATTGTCCGAACAGTGGGAACACACGCACGT----------------ACCTGCA-GCCCACGT-ATGCACGGGTGTGTGTGT--------GT--------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TAGCG---------------------GTAAAG---------------CGT-GGGGTAGCTGCA-----------------------------GCGGG---------------CGGTTCAGAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTT----------------TCTTATTCCAGTGAGCGTTAT-------GTGCATG-CATA--TGGGTATATGT--ATTCATATGTATGTAT-----------ATG-TGGGCCCCAAAC-TACAAAGCAAGAACAACTAAAACCACACCCACACATACTGCTATTGTCCGAACAGTGGGAACACACGCACGT----------------ACCTGCA-GCCCACGT-ATGCACGGGTGTGTGTGT--------GT---------GTGTGTT----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.AGCG---------------------GTAAAG---------------CGT-GGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
droWil2
AAGAGAACGTGAGGTGTGTAACA--GGGTCTAATTTTTGTTGTTGCTTCT-TCG---GCTGCAACCCGCT---------------------GCCGG------------------GGCCAAAGGT------------------------GAGTGCGTGCCGAATATTGTTTATAGTTGGCTTATTTTAGTTTGGTTTATTGTT-----------A----------------------------------------------------------------TGTATGCGCCACA----CAG---------------CCTCACGCACACACAC--------------------ACACACACACAACC----------------AACACCT-ACTCACGT-AC----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................GCT---------------------GCCGG------------------GGCCAAAGGT------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
............................................................GCAACCCGCT---------------------GCCGG------------------GGCCAAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010

Generated: 05/18/2015 at 05:10 PM