ID:

dsi_15247

 Coordinate:

3r:12818757-12818906 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.9

Flybase annnotation

Antisense to intron [3r_12817594_12819601_+]

No Repeatable elements found

Sense Strand Reads

AATACTTTTGCTGTTATATGTTGTTGGCTATCGATGGCATTTCAAACCCCACACCGCCACGCCCCCTGCGCCCACCTTGCAAGTGACTGTCATTAAAGTGCTGGAAAGGCCAACATGTGTGTAGTATCTTGGTGCTCGGGCGTGTGGGTGTGCGGGAAAAGCAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAATCCCCCGCATCCATCCAGTCCAG
*******************************************************************(((((........(((..((((.(((....(((.(((.....))).)))..)))))))..)))))))).****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553487
NRT_0-2 hours eggs
...................................................................................................................TGTGTGTAGTATCTTGGTGCT.................................................................................................................. 21 0 1 2.00 2 1 1 0 0
..................................................................................................................ATGTGTGTAGTATCTTGGTGC................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...................................................................GCGCCCACCTTGCAAGTGACT.................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
...........................................................................CTTGCAAGTGACTGTCATTAAAGTGC..................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
............................................................................TTGCAAGTGACTGTCATTAAA......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
..............TATATGTTGTTAGCTATCGATGGCA................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0
....................................................................................................................GTGTGTAGTATCTTGGTGCTC................................................................................................................. 21 0 1 1.00 1 0 1 0 0
........................................................................................GTCATTAAAGTGCTGGAAAGG............................................................................................................................................. 21 0 1 1.00 1 0 1 0 0
.........................................................................................................................................................................................AAAATATTTACACAGGACACT............................................ 21 0 1 1.00 1 0 1 0 0
......................................................................................................................TTGTAGTATCTTGGGGCT.................................................................................................................. 18 2 4 0.25 1 0 0 1 0
.......................................................................................TGTCTTTAAAGTGCTCGA................................................................................................................................................. 18 2 11 0.18 2 0 0 0 2
........TGCTGTTCTATTTTGTTGG............................................................................................................................................................................................................................... 19 2 13 0.08 1 1 0 0 0
............................................................GCCCCCTGCGTCCACCA............................................................................................................................................................................. 17 2 20 0.05 1 0 1 0 0
...............................................................................................................................................................................................................GTTATCACATAGTCATA.......................... 17 2 20 0.05 1 0 0 0 1

Anti-sense strand reads

TTATGAAAACGACAATATACAACAACCGATAGCTACCGTAAAGTTTGGGGTGTGGCGGTGCGGGGGACGCGGGTGGAACGTTCACTGACAGTAATTTCACGACCTTTCCGGTTGTACACACATCATAGAACCACGAGCCCGCACACCCACACGCCCTTTTCGTTATTTTTGCTCCGTTTGTTAACTTTTATAAATGTGTCCTGTGAACAATAGTGTTTCTGTATGTTAGGGGGCGTAGGTAGGTCAGGTC
******************************************************************************************************************(((((........(((..((((.(((....(((.(((.....))).)))..)))))))..)))))))).******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
......................................................................................................................................................................................................................................GGGCGTAGGTAGGTC..... 15 0 1 6.00 6 4 1 0 1 0
......................................................................................................................................................................................................................................GGGCGTAGGTAGGTCAC... 17 1 1 5.00 5 4 0 1 0 0
......................................................................................................................................................ACGCCCTTTTCGTTATTTTTGCTCCGT......................................................................... 27 0 1 5.00 5 1 4 0 0 0
................................................................................................................................................................................................................................GTTAGGGGGCGTAGGTAGGTCAGGT. 25 0 1 4.00 4 3 1 0 0 0
......................................................................................................................................................................................................................................GGGCGTTGGTAGGTCA.... 16 1 3 3.67 11 0 7 0 4 0
...................................................................................................................................................................................................................AGTGTTTCTGTATGTTAGGGGGCGT.............. 25 0 1 3.00 3 3 0 0 0 0
.....................................................................................................................................................................................................................................GGGGCGTAGGTAGGTC..... 16 0 1 3.00 3 3 0 0 0 0
.....................................................................................................................................................................................................................................GGGGCGTAGGTAGGTCACGA. 20 2 2 2.00 4 1 1 2 0 0
................................................................................................................................................................CGTTATTTTTGCTCCGTTTGTTAACTT............................................................... 27 0 1 2.00 2 0 2 0 0 0
.................................................................................TCACTGACAGTAATTTCACGACCTTT............................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0
....................................................................................................................................................................................................................................GGGGGCGTAGGTAGGTCA.... 18 0 1 2.00 2 1 0 1 0 0
..................................................................ACGCGGGTGGAACGTTCACTGACAGT.............................................................................................................................................................. 26 0 1 2.00 2 1 1 0 0 0
............................................................................................................................................................................................................................GTATGTTAGGGGGCGTAGGTAGGT...... 24 0 1 2.00 2 2 0 0 0 0
....................................................................................................................................................................................................................................GGGGGCGTAGGTAGGTCAC... 19 1 1 2.00 2 2 0 0 0 0
...........................................................................................................................................................................................TTATAAATGTGTCCTGTGAACAAT....................................... 24 0 1 2.00 2 2 0 0 0 0
..................................................................ACGCGGGTGGAACGTTCACTGACAGTAAT........................................................................................................................................................... 29 0 1 2.00 2 0 2 0 0 0
.....................................................................................................................................................................................................................................GGGGCGTAGGTAGGTCAC... 18 1 1 2.00 2 2 0 0 0 0
.................................................................................................................................................................................................................................TTAGGGGGCGTAGGTAGGTCAGGT. 24 0 1 2.00 2 2 0 0 0 0
......................................................................................................................................................................................................................................GGGCGTAGGTAGGTCACG.. 18 1 1 2.00 2 0 0 2 0 0
......................................................................................................................................................................................................................................GGGCGTAGGTAGGTCA.... 16 0 1 2.00 2 2 0 0 0 0
......................................................................................................................................................................................................................................GGGCGTTGGTAGGTC..... 15 1 6 1.17 7 2 1 1 3 0
.......................................................................................................................................................................................................................................GGCGTAGGTAGGTCACG.. 17 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................ATGTGTCCTGTGAACAATAGT.................................... 21 0 1 1.00 1 1 0 0 0 0
...................................................................CGCGGGTGGAACGTTCACTGACAGTAATT.......................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................................GGGGGCGTTGGTAGGTC..... 17 1 1 1.00 1 1 0 0 0 0
.........................................................................................AGTAATTTCACGACCTTTCCGGTTGTA...................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................TCGTTATTTTTGCTCCGTTTGTTAACTT............................................................... 28 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................................TGGGGGCGTAGGTAGGTC..... 18 1 1 1.00 1 1 0 0 0 0
....................................................................................................................................................ACACGCCCTTTTCGTTATTTTTGCTCCGTT........................................................................ 30 0 1 1.00 1 0 1 0 0 0
................................................................................................TCACGACCTTTCCGGTTGTACACACATCAT............................................................................................................................ 30 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................TGTTAGGGGGCGTAGGTAGGTCAGGT. 26 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................TTGTTAACTTTTATAAATGTGTCCT................................................ 25 0 1 1.00 1 1 0 0 0 0
....................................................................................CTGACAGTAATTTCACGACCT................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................................GGGGGCGTAGGTAGGT...... 16 0 1 1.00 1 0 0 1 0 0
...............................................................................................................................................................TCGTTATTTTTGCTCCGTTTGTTAACT................................................................ 27 0 1 1.00 1 0 1 0 0 0
..........................CGATAGCTACCGTACAGTTTGGAGTGT..................................................................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0
.........................................................................................................TTCCGGTTGTACACACATCATAGAAC....................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................ATTTTTGCTCCGTTTGTTAACTTT.............................................................. 24 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................TTGTTAACTTTTATAAATGTGTCCTGT.............................................. 27 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................AAAATGTGTCCTGTGAACAATAGTGTT................................. 27 1 1 1.00 1 0 1 0 0 0
..............................................................GGGGACGCGGGTGGAACGTTCACTG................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.......................AATCGATAGCTACCGTACAGTTTGGAGT....................................................................................................................................................................................................... 28 3 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................TTCGTTATTTTTGCTCCGTTTGTT.................................................................... 24 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................................GGGGCGTAGGTAGGTCA.... 17 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................GGGGCGTAGGTAGGTCAGGT. 20 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................GGGGCGTAGGTAGGT...... 15 0 2 1.00 2 2 0 0 0 0
...................................................................................................................................................................................................................................TGGGGGCGTAGGTAGGTCACG.. 21 2 1 1.00 1 1 0 0 0 0
............................................................................................................CGGTTGTACACACATCATAGAAC....................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................GGGGGCGTAGGTAGG....... 15 0 1 1.00 1 0 0 0 1 0
............................................................................................................................................................................................................................GTATGTTAGGGGGCGTAGGTAGGTCA.... 26 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................................TAGTGTTTCTGTATGTTAGGGGGCGT.............. 26 0 1 1.00 1 1 0 0 0 0
................................................................................................................TGTACACACATCATAGAACCACGAGC................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................AGTGTCCTGTGAACAATAGTGTTTCTGT............................ 28 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................GGGGCGTAGGTAGGTCACG.. 19 1 1 1.00 1 1 0 0 0 0
.....................................................................CGGGTGGAACGTTCACTGACAGTAATT.......................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................TCCTGTGAACAATAGTGTTTCTGT............................ 24 0 1 1.00 1 0 1 0 0 0
..................................................................ACGCGGGTGGAACGTTCACTGACAGTA............................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................AGTGATTCTGTAAGTTAG..................... 18 2 6 0.67 4 3 0 0 0 1
...................................................................................................................................................................................................................................AGGGGACGTATGTAGATCAG... 20 3 2 0.50 1 0 0 0 1 0
....................................................................................................................................................................................................................................GGGGGTGTAGGTAGGTCACG.. 20 2 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................................................................................................GGCGTAGGTAGGTCAC... 16 1 3 0.33 1 1 0 0 0 0
......................................................................................................................................................................................................................................GGGCGTAGGTAAGTCA.... 16 1 4 0.25 1 0 0 0 1 0
......................................................................................................................................................................................................................................GGGCGTAGGTAGTTCA.... 16 1 4 0.25 1 1 0 0 0 0
.......................................................................................................................................................................................................................................GGCGTTGGTAGGTCA.... 15 1 10 0.20 2 1 1 0 0 0
.....................................................................................................................................................................................................................................CGGGCGTTGGTAGGTC..... 16 2 20 0.20 4 2 2 0 0 0
.................................................................................................................................................................................................................................TTCGGGGGCGTAGGTTAGTCA.... 21 3 7 0.14 1 0 1 0 0 0
..................................................................................................................................................................................................................................TTGGGGGCGTAGGTA......... 15 1 10 0.10 1 1 0 0 0 0
.....................................................................................................................................................................................................................................CGGGCGTTGGTAGGTCA.... 17 2 11 0.09 1 0 1 0 0 0
....................................................................................................................................................................................................................................GGGGGCGTAGGTTAGTCA.... 18 2 14 0.07 1 0 1 0 0 0
......................................................................................................................................................................................................................................GGGCGTAGGTGGGTC..... 15 1 16 0.06 1 1 0 0 0 0
...................................................................................................................................................................................................................................AGGGTGCGTAGGTAG........ 15 1 18 0.06 1 0 0 0 1 0
...................................................................................................................................................................................................................................TGGGGGCGTAGGTAG........ 15 1 18 0.06 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:12818707-12818956 - dsi_15247 AATACTT------------------TTG------CTGTTAT-------ATGTT-------GT-TGGCTATCGATGGCA--------------------------TTTCAA-ACC------C---CACA-CC------------GC-------CACGCC-CC---------------------CT---GCGCCCACCTTGCAAGTGAC----------TGTCATTAAAGTG-CTGGAAAGGCCAACATG-------TGT---------------------------G---TAGTA----------------------------------------------------------TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGAAAAG-CAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TCCCC--------CGCATC-------------------CATCCAGT-----CCAG
droSec2 scaffold_0:13646400-13646649 - AATACTT------------------TTG------CTGTTAT-------ATGTT-------GT-TAGCTATCGATGGCA--------------------------TTTCAA-GCC------C---CACA-CC------------GC-------CACGCC-CC---------------------CT---GCGCCCACCTTGCAAGTGAC----------TGTCATTAAAGTG-CTGGAAAGGCCAACATG-------TGT---------------------------G---AAGTA----------------------------------------------------------TCTTGGAGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGAAAAG-CAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TCCCC--------CGCATC-------------------CATCCAGT-----CCAG
dm3 chr3R:8339547-8339796 + AATACTT------------------TTG------CTGTTAT-------ATGTT-------GT-TGGCTATCGATGGCA--------------------------TTTCAA-ACC------C---CACA-CC------------GC-------CCCGCT-CC---------------------CT---GCGTCCACCTTGCAAGTGAC----------TGTCATTAAAGTG-CTGGAAAGGCCAACATG-------TGT---------------------------G---CAGTA----------------------------------------------------------TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGAAAAG-CAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TCCCC--------CGCATC-------------------CATCCAGT-----CCAG
droEre2 scaffold_4770:13312981-13313235 - AATACTC------------------TTG------TTGTTAC-------ATGTT-------CT-TGGGTATCGATGCCA--------------------------CTTCA---GC------C---CACA-CC------------AG-------CCCGCC-CC---------------------CT---CCGTCCACCTTGCAAGTGAC----------TGTCATTAAAGTG-CTGGAAGGGCCAACATG-------TGT--------------------------AG---TAGTA----------------------------------------------------------TCTTGGAGT------T----CA----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGGAAAG-CAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACCAA--CCCTC--------CGCATC-------------------CGTCCAGTCCAGTCCAG
droYak3 3R:12623473-12623751 + AATACTT------------------TTG------CTGCTAT-------GTGTT-------GT-TGGGTATCGATGGCA--------------------------TTTCA---CC------C---CACACCA------------CC-------CACACC---ACCCACACCACCCCGCCCCCC-T---GCGCCCACCTTGCAAGTGAC----------TGTCATTAAAGTG-CTGGAAAGGCCAACATG-------TGT--------------------------AGTAGTAGTA----------------------------------------------------------TCTTGGTGC------T----CA----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGAAAAG-CAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TCCCCCATCCTCCCGCATC-------------------CATCCAGT-----CCAA
droEug1 scf7180000409615:549670-549923 + AATACTT------------------TAG------TTGTTGC-------ATGTT-------GT-TGAGTATCGATGGCA--------------------------TTTCA---CC------C---TGTC-CG------------GC-------CCCGCC-CC---------------------CT---TCGCCCACCTTGC-AGCAAC----------TGTCATTAAACTGGCTGGAAAGGCCAACATG-------TGT---------------------------T-----GTA----------------------------------------------------------TCTTGGTGC------T----CTGT--GG--T-------------GG------------C-------------------------------------------------ATGTGCGTG--------TGC------------------GGGAAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAT---CTCCCCGTCCCTCCGTATC-------------------C----AG------CCAA
droBia1 scf7180000302402:10418-10643 + AATTCTT------------------TAT------CTGCTGT-------ATGCT-------GT-TGGGTATCGATGGCA--------------------------TTTAA---CC------C---C--C--G------------G--------------------------------------AT---CCGCCCACCTTG-GAGCAAC----------TGTCATTAAACAG-CTGGAAAGGCCAGCATG-------TGA---------------------------T-----GTA----------------------------------------------------------TCTTGGTGC------T----CT----------------------GG------------C-------------------------------------------------GTGTGCGTG--------TGC------------------GGGAAAAG-TAATAAAAACGAGGAAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---T-CCC--------CGCATC-------------------CGTCCA-----------
droTak1 scf7180000415366:222748-222984 - AATACTT------------------TGG------CTGTTGT-------ATGTT-------GT-TGAGTATCGATGGCA--------------------------TTTCA---CC------C---C------------------GT-------CCCGCC-CC---------------------CTGCAGCGCCCACCTTGC-AGTAAC----------TGTCATTAAACTG-CTGGAAAGGCCAACATG-------TGT---------------------------T-----GTA----------------------------------------------------------TCTCGGTGC------T----CT----------------------GG------------C-------------------------------------------------ATGTGCGTG--------TGC------------------GGGAAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TTCCC--------CGCATC-------------------CGTCC-----------G
droEle1 scf7180000490994:6793-7058 + AATACTT------------------TTG------CTGTTGT-------ATGTT-------GT-AGAGTATCGATGGCA--------------------------TTCTACCAC----TTCGCCACGCC-CC------------GC-------CCCGCCCAC---------------------CA---TCGCCCACCTTGCAAGTAAC----------TGTCATTAAACTG-CTGGAAAGGCCAACATG-------TGG---------------------------G-----GTA----------------------------------------------------------TCTTGGTGC------T----CT----------------------TGCGTGTGTG--CGTGT-------------------------G--------------------TGAGTGGGTG--------TGC------------------GGGAAATG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TTACC--------CGCATC-------------------CATCCAAT-----C---
droRho1 scf7180000779239:14881-15124 + AATACTT------------------TTG------CTGTTGT-------ATGTT-------GT-TGAGTATCGATGGCA--------------------------TTTTTCCAC----------------CC------------GC-------CCCTCC-AC---------------------CT---TCGCCCACCTTGCAAGTAAC----------TGTCATTAAACTG-CTGGAAAGGCCAACATG-------TGT---------------------------T-----GTA----------------------------------------------------------TCATGGTGC------T----CT----------------------TG------------C---------------------------G--------------------TGTGTGTGTG--------TGC------------------GGGAAATG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TCACC--------CGCATC-------------------CATCCAAT-----CCA-
droFic1 scf7180000453812:783489-783753 - GATACCC------------------TTG------CTGTTGC-------ATGTT-------GC-TGGCTATCGATGGCC---------------------------------------------------CC------------GC-------CACGCC--C---------------------CT---TCGCCCACCTTGCAGGCAAC----------TGTCATTAAACTG-CTGGAAAGGCCAACATG-------TGT---------------------------C----GGTA----------------------------------------------------------TCTTGCTTC------T----CTGT--TG--AGTGGGTGTGCTGGTGTGTGTTTGCTCTTGT-------------------------G--------------------TGTGTGTGTG--------TGC------------------GGGGAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---CACCC--------CGCATC-------------------TATTCAGT-----T---
droKik1 scf7180000302256:732566-732810 - AATGCTG------------------TTG------CTGTATT----GCTGTGTT-------GTGCGAGTATCGAGAACC---------------------------------ATC------C---AGTA-CC------------GC-------CT--CC-CC---------------------CT---TGGCCCACAGCCCAAGTAAC----------TGTCATTAAACTG-CTGGAAAGGCCAACATG-------TGT---------------------------T-----GTG----------------------------------------------------------TCTTCGTGC------A----CG----------------------GG------------TGT-------------------------G--------------------TGTGTGTGTG--------TGC------------------GGCAAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TGCCC--------CGCATT-------------------AAATCGGT-----C---
droAna3 scaffold_12911:3270704-3270959 + AATGCTA------------------TTG------CTGTTGT-------AC--------------GAGTATCGACGGCA--------------------------TTCTGA-GCC------C---TCCC-CA------------G--------CC-------CGTA----------T---T--------------CCTGCCAAGAAAC----------TGTCATTAAACCG-CTGGAAGGGCCAACATG-------TGT--------------------------GCTCC------------------------------------------------------------------------------T----ATG-------GAT-TGTGTGCTTGTG------------TGT-------------------------GTTATTTGGAGTGGCGGGGAGTGGGTGCGGG--------TGC------------------GGAAAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAG---T-CCC--------CGCAC---------------------GACCACC-----C---
droBip1 scf7180000396640:135346-135596 + AATGCTA------------------TTG------CTGTTGT-------AC--------------GAGTATCGACGGCA--------------------------TTCTGA-GCC----------CGCC-CC------------AG-------CC-------CGTA----------T---T--------------CCTGCCAAGAAAC----------TGTCATTAAACCG-CTGGAAGGGCCAACATG-------TGT--------------------------GCTCA------------------------------------------------------------------------------T----ATG-------GATTTGTGTGCTTGTG------------TGT-------------------------GTTCCTTGGAGTGGCGGG----GAGT--GGG--------TGC------------------GGGAAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAG---T-CCC--------CGCAC---------------------GACCACC-----C---
dp5 2:2446056-2446389 + AATACTA------------------TTG------CTGTTGG---------------------------ATCGACGGCA--------------------------CTGTAA--CC------C---TGCC-CC------------GT-------CA-----------------------------------GACCATC---------AC----------TGTCATTACACTG-CCGG---------CGTGTGGCATGTGAGTGTGTGGTGCCGAGTATCTTCGTATAC---TCGTATCTTCGTGCTGTGGTGCGGGTGCCGCTGGTTCTGGTTCTCGTGGGTGGGTGGGTGTTTGC----TT-GATTGGTATGTATG-TATGTGGGTGTGTGTGTGTGTG------------TGT-------------------------GT--------------------G----------------TGTGGGGTGGGGTGGGGAG-GGGGGAAAG-TAATAAAAACGAAGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAG-----CCC--------CGCATT-------------------G----AGA-----CCCG
droPer2 scaffold_7:2615546-2615862 + AATACTA------------------TTG------CTGTTGG---------------------------ATCGACGGCA--------------------------CTGTAA--CC------C---TGCC-CC------------GT-------CA-----------------------------------GACCATC---------AC----------TGTCATTACACTG-CCGG---------CGTGTGGCATGTGAGTGTGTGGTGCCGAGTATCTT------T-----GTATCTTCGTGCTGTGGTGCGGGTGCTGCTGGTTCTGGTTCTCGTGGGTGGGTGGGTGTTTGC----TT-GATTGGTATGTATG-T-----------------------------------------------------------------------------------ATGTGGGTGTGTGTGTGTGTGGGGTGGGGTGGGGAGGGGGGGAAAG-TAATAAAAACGAAGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAG-----CCC--------CGCATT-------------------C----AGA-----CCCG
droWil2 scf2_1100000004943:2135482-2135740 + ATGGCAT------------------TTG------TTGTTGA---------------------------ATCGATGGCAA----------------------GTCTTTC---GCCCGATTCC---CATA-CC------------TCCTT----CCCGCTTA-----------------------A---TTCCCGACCCT-------ATTTG-GGTCGCTGTCATTTAACTA-CTTG---TGTCACTCTG-------TGT---------------------------C----GGTG----------------------------------------------------------TCTGTAT-----------------------------------------------------------------------------------------------------GTGTCGGTG--------TGA--------GGGAGGGC-TGGGCAAAA-TAATAAAAACGAAGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACACACAC---ACACA--------CACATTCACACAAACACA-------CACACAGG-----CCCT
droVir3 scaffold_12855:634761-635063 - ATTGCCGCTGTAGTTATTCCTGTTGTTGTTGTTGTTATTGTCATTGT--TGTTGTT-GTTG---TACCATCGATGACA--------------------------AAC----ACC------C---TCCT-TAGTGTATAGTACCCACTTCTCAC--------------------------T----------CCC-----ACAACCAACTTT-GGGCGGCGCCATTTAACCA-GTTT--------------------------------------------------T-----GAA----------------------------------------------------------TAATCGAGC------T----GG----------------------TGTGTGTGC-------------------------------------------------------GTGTCGGTGTGTGTGGGTGT------------------GGGAAAAG-TAATAAAAACGAAACAAACAATTGAAAATATTTACACAGGACACTTGCTATCATAAAGATATACAGTGCCTCCA--------CAGATACACCCACACATA-------CACCGACT-----CATT
droMoj3 scaffold_6540:12336098-12336404 + ATTGCTGCTGTAGTTGC--TTGTCGCAGTTGTTGTTGTTGTTATTGT--TGTTGT----------TGTATCGATGATA--------------------------AACACA-ATC------C---AGCA-CT------------GAGTTTTAACC-------CCAA----------C---T--------------GATGCCAGGCAACTTTGGTTCGGCGCCATTTAACCA-GACGAG-------------------------------------------------------AG----------------------------------------------------------TAATCGAGT------T----TT----------------------TATGTGTGTG--TGTGTNNNNNNNNNNNNNNNNNNNNNNNNNT--------------------CCT---ACAG--------TGC------------------TTGAATAGATACAAGCACCCACACAAACAAACACCAACACTCACACACA-CAC----AACCACACATACCCACAC---ACACA--------CACACA------CACACCCACCAACACATAGAT--------T
droGri2 scaffold_14906:1743607-1743807 - ATTAAGA-----GTTAA---TGTTGTTG------TTGTTGTTCCTG--TTGTTTTTAGC------TGTATCGATGACAAACACACATAGCTCTCGCTAAGCGCCTTTG---ACGCGATAC-----------------------------------------------------------------------CCGCA------------TT-GGGCGGCAACATTTAGACA-GTC-----------------------------------------------------------------------------------------------TTATAGTGTGTGTGTGTGTGTTTTTTGTGTGT------T----TA----------------------TG------------TGT-------------------------G--------------------TGTGTGTGTG--------TAT------------------TGGAAAAG-TAATAAAAACGAAGC-------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AATACTT------------------TTG------CTGTTAT-------ATGTT-------GT-TGGCTATCGATGGCA--------------------------TTTCAA-ACC------C---CACA-CC------------GC-------CACGCC-CC---------------------CT---GCGCCCACCTTGCAAGTGAC----------TGTCATTAAAGTG-CTGGAAAGGCCAACATG-------TGT---------------------------G---TAGTA----------------------------------------------------------TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGAAAAG-CAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TCCCC--------CGCATC-------------------CATCCAGT-----CCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................TG-------TGT---------------------------G---TAGTA----------------------------------------------------------TCTTGGTGC------T----...................................................................................................................................................................................................................................................................2112.00200000001010000000
.....................................................................................................................................................................................................................................................ATG-------TGT---------------------------G---TAGTA----------------------------------------------------------TCTTGGTGC------........................................................................................................................................................................................................................................................................2111.00100000001000000000
...........................................................................................................................................................................................GCGCCCACCTTGCAAGTGAC----------T.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
...................................................................................................................................................................................................CTTGCAAGTGAC----------TGTCATTAAAGTG-C...............................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
....................................................................................................................................................................................................TTGCAAGTGAC----------TGTCATTAAA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.......................................................................................................................................................................................................................................................G-------TGT---------------------------G---TAGTA----------------------------------------------------------TCTTGGTGC------T----C..................................................................................................................................................................................................................................................................2111.00100000000010000000
..........................................................................................................................................................................................................................GTCATTAAAGTG-CTGGAAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATATTTACACAGGACACT...............................................................................2111.00100000000010000000
droSec2
AATACTT------------------TTG------CTGTTAT-------ATGTT-------GT-TAGCTATCGATGGCA--------------------------TTTCAA-GCC------C---CACA-CC------------GC-------CACGCC-CC---------------------CT---GCGCCCACCTTGCAAGTGAC----------TGTCATTAAAGTG-CTGGAAAGGCCAACATG-------TGT---------------------------G---AAGTA----------------------------------------------------------TCTTGGAGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGAAAAG-CAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TCCCC--------CGCATC-------------------CATCCAGT-----CCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
AATACTT------------------TTG------CTGTTAT-------ATGTT-------GT-TGGCTATCGATGGCA--------------------------TTTCAA-ACC------C---CACA-CC------------GC-------CCCGCT-CC---------------------CT---GCGTCCACCTTGCAAGTGAC----------TGTCATTAAAGTG-CTGGAAAGGCCAACATG-------TGT---------------------------G---CAGTA----------------------------------------------------------TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGAAAAG-CAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TCCCC--------CGCATC-------------------CATCCAGT-----CCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................TGT---------------------------G---CAGTA----------------------------------------------------------TCTTGGTGC------T----CG----------------------G..........................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................T---------------------------G---CAGTA----------------------------------------------------------TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTG........................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000
..................................................GTT-------GT-TGGCTATCGATGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAACGAGGCAAACAATTGAAAATA..............................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000
......................................TAT-------ATGTT-------GT-TGGCTATCGATGGCA--------------------------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGG.....................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GTTAT-------ATGTT-------GT-TGGCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AATACTT------------------TTG------CTGTTAT-------ATGTT-------GT-TGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------..........................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGA.....................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGG.....................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000
................................................................................................................................................................................................................................................CCAACATG-------TGT---------------------------G---CAGTA----------------------------------------------------------TCTTGGTG...............................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CAAGTGAC----------TGTCATTAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................G-------TGT---------------------------G---CAGTA----------------------------------------------------------TCTTGGTGC------T----C..................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................T-CC---------------------CT---GCGTCCACCTTGCAAGTGAC----------..............................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ATG-------TGT---------------------------G---CAGTA----------------------------------------------------------TCTTGGTG...............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTTGTTATCACAAAGACA...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTG------CTGTTAT-------ATGTT-------GT-TGGCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CCTTGCAAGTGAC----------TGTCATTAAAGTG-C...............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGAAAAG-............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................TTAT-------ATGTT-------GT-TGGCTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................T---------------------------G---CAGTA----------------------------------------------------------TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------...........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TGCAAGTGAC----------TGTCATTAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGT...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGA.................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTG--------TGC------------------GGGAAAAG-CAATA.......................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................TG-CTGGAAAGGCCAACATG-------TGT---------------------------G---CAGT..................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------.....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.ATACTT------------------TTG------CTGTTAT-------ATGTT-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TAAAGTG-CTGGAAAGGCCAACATG-------........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................T-CC---------------------CT---GCGTCCACCTTGCAAGTGAC----------TG............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................T-------ATGTT-------GT-TGGCTATCGATGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CCTTGCAAGTGAC----------TGTCATTAAAGTG-CT..............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TCCACCTTGCAAGTGAC----------TGTCATT.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................CCCGCT-CC---------------------CT---GCGTCCACCTTGCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGTG--------TGC------------------GGGAAAAG-CAATAAAA....................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTA--------..........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................TTGCAAGTGAC----------TGTCATTAAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GCT-CC---------------------CT---GCGTCCACCTTGCAAGTGAC----------..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGGGTG--------TGC------------------GGGAAAAG-CAA.........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TGGAAAGGCCAACATG-------TGT---------------------------G---CAGTA----------------------------------------------------------T......................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AAGTGAC----------TGTCATTAAAGTG-C...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------T.........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TCATTAAAGTG-CTGGAAAGGCCAACA.................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AACATG-------TGT---------------------------G---CAGTA----------------------------------------------------------TCTTGGT................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................C------------GC-------CCCGCT-CC---------------------CT---GCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------G....................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................CCTTGCAAGTGAC----------TGTCATTAAAGTG-CA..............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGG....................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGGGTG--------T.........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....................................GTTAT-------ATGTT-------GT-TGGCTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TAAAGTG-CTGGAAAGGCCAACATG-------TGT---------------------------..........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TA----------------------------------------------------------TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GT.........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GT-TGGCTATCGATGGCA--------------------------TTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTACACAGGACACTTG.............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TAAAGTG-CTGGAAAGGCCAACATG-------TG......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AAGTGAC----------TGTCATTAAAGTG-CT..............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TGTCATTAAAGTG-CTGGAAAGGCC.....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TG-------TGT---------------------------G---CAGTA----------------------------------------------------------TCTTGGTGC------T----...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGGGTG--------TGC------------------GGGAAAAG-CAAT........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATATTTACACAGGACACT...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................T-CC---------------------CT---GCGTCCACCTTGCAAGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TGTT-------GT-TGGCTATCGATGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................T-TGGCTATCGATGGCA--------------------------TTTCAA-ACC------C---C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TGCAAGTGAC----------TGTCATTAAAGTG-CT..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGT---------------------------G---CAGTA----------------------------------------------------------TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------...........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................A----------------------------------------------------------TCTTGGTGC------T----CG----------------------GG------------C-------------------------------------------------GTGTGG.....................................................................................................................................................................2211.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACTT------------------TTG------CTGTTAT-------ATGTT-------GT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATACAA---TCCCC--------CGCAT.....................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGGACACTTGTTATCACAAAGACA...............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TGTCATTAAAGTG-CTGGAAAGGCCA....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAATATTTACACAGGAC..................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GCCAACATG-------TGT---------------------------G---CAGTA----------------------------------------------------------TCTTGGTGC------........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AATACTC------------------TTG------TTGTTAC-------ATGTT-------CT-TGGGTATCGATGCCA--------------------------CTTCA---GC------C---CACA-CC------------AG-------CCCGCC-CC---------------------CT---CCGTCCACCTTGCAAGTGAC----------TGTCATTAAAGTG-CTGGAAGGGCCAACATG-------TGT--------------------------AG---TAGTA----------------------------------------------------------TCTTGGAGT------T----CA----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGGAAAG-CAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACCAA--CCCTC--------CGCATC-------------------CGTCCAGTCCAGTCCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
AATACTT------------------TTG------CTGCTAT-------GTGTT-------GT-TGGGTATCGATGGCA--------------------------TTTCA---CC------C---CACACCA------------CC-------CACACC---ACCCACACCACCCCGCCCCCC-T---GCGCCCACCTTGCAAGTGAC----------TGTCATTAAAGTG-CTGGAAAGGCCAACATG-------TGT--------------------------AGTAGTAGTA----------------------------------------------------------TCTTGGTGC------T----CA----------------------GG------------C-------------------------------------------------GTGTGGGTG--------TGC------------------GGGAAAAG-CAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TCCCCCATCCTCCCGCATC-------------------CATCCAGT-----CCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AATACTT------------------TAG------TTGTTGC-------ATGTT-------GT-TGAGTATCGATGGCA--------------------------TTTCA---CC------C---TGTC-CG------------GC-------CCCGCC-CC---------------------CT---TCGCCCACCTTGC-AGCAAC----------TGTCATTAAACTGGCTGGAAAGGCCAACATG-------TGT---------------------------T-----GTA----------------------------------------------------------TCTTGGTGC------T----CTGT--GG--T-------------GG------------C-------------------------------------------------ATGTGCGTG--------TGC------------------GGGAAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAT---CTCCCCGTCCCTCCGTATC-------------------C----AG------CCAASizeHit CountTotal NormTotal
No Reads
droBia1
AATTCTT------------------TAT------CTGCTGT-------ATGCT-------GT-TGGGTATCGATGGCA--------------------------TTTAA---CC------C---C--C--G------------G--------------------------------------AT---CCGCCCACCTTG-GAGCAAC----------TGTCATTAAACAG-CTGGAAAGGCCAGCATG-------TGA---------------------------T-----GTA----------------------------------------------------------TCTTGGTGC------T----CT----------------------GG------------C-------------------------------------------------GTGTGCGTG--------TGC------------------GGGAAAAG-TAATAAAAACGAGGAAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---T-CCC--------CGCATC-------------------CGTCCA-----------SizeHit CountTotal NormTotal
No Reads
droTak1
AATACTT------------------TGG------CTGTTGT-------ATGTT-------GT-TGAGTATCGATGGCA--------------------------TTTCA---CC------C---C------------------GT-------CCCGCC-CC---------------------CTGCAGCGCCCACCTTGC-AGTAAC----------TGTCATTAAACTG-CTGGAAAGGCCAACATG-------TGT---------------------------T-----GTA----------------------------------------------------------TCTCGGTGC------T----CT----------------------GG------------C-------------------------------------------------ATGTGCGTG--------TGC------------------GGGAAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TTCCC--------CGCATC-------------------CGTCC-----------GSizeHit CountTotal NormTotal
No Reads
droEle1
AATACTT------------------TTG------CTGTTGT-------ATGTT-------GT-AGAGTATCGATGGCA--------------------------TTCTACCAC----TTCGCCACGCC-CC------------GC-------CCCGCCCAC---------------------CA---TCGCCCACCTTGCAAGTAAC----------TGTCATTAAACTG-CTGGAAAGGCCAACATG-------TGG---------------------------G-----GTA----------------------------------------------------------TCTTGGTGC------T----CT----------------------TGCGTGTGTG--CGTGT-------------------------G--------------------TGAGTGGGTG--------TGC------------------GGGAAATG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TTACC--------CGCATC-------------------CATCCAAT-----C---SizeHit CountTotal NormTotal
No Reads
droRho1
AATACTT------------------TTG------CTGTTGT-------ATGTT-------GT-TGAGTATCGATGGCA--------------------------TTTTTCCAC----------------CC------------GC-------CCCTCC-AC---------------------CT---TCGCCCACCTTGCAAGTAAC----------TGTCATTAAACTG-CTGGAAAGGCCAACATG-------TGT---------------------------T-----GTA----------------------------------------------------------TCATGGTGC------T----CT----------------------TG------------C---------------------------G--------------------TGTGTGTGTG--------TGC------------------GGGAAATG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TCACC--------CGCATC-------------------CATCCAAT-----CCA-SizeHit CountTotal NormTotal
No Reads
droFic1
GATACCC------------------TTG------CTGTTGC-------ATGTT-------GC-TGGCTATCGATGGCC---------------------------------------------------CC------------GC-------CACGCC--C---------------------CT---TCGCCCACCTTGCAGGCAAC----------TGTCATTAAACTG-CTGGAAAGGCCAACATG-------TGT---------------------------C----GGTA----------------------------------------------------------TCTTGCTTC------T----CTGT--TG--AGTGGGTGTGCTGGTGTGTGTTTGCTCTTGT-------------------------G--------------------TGTGTGTGTG--------TGC------------------GGGGAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---CACCC--------CGCATC-------------------TATTCAGT-----T---SizeHit CountTotal NormTotal
No Reads
droKik1
AATGCTG------------------TTG------CTGTATT----GCTGTGTT-------GTGCGAGTATCGAGAACC---------------------------------ATC------C---AGTA-CC------------GC-------CT--CC-CC---------------------CT---TGGCCCACAGCCCAAGTAAC----------TGTCATTAAACTG-CTGGAAAGGCCAACATG-------TGT---------------------------T-----GTG----------------------------------------------------------TCTTCGTGC------A----CG----------------------GG------------TGT-------------------------G--------------------TGTGTGTGTG--------TGC------------------GGCAAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAA---TGCCC--------CGCATT-------------------AAATCGGT-----C---SizeHit CountTotal NormTotal
No Reads
droAna3
AATGCTA------------------TTG------CTGTTGT-------AC--------------GAGTATCGACGGCA--------------------------TTCTGA-GCC------C---TCCC-CA------------G--------CC-------CGTA----------T---T--------------CCTGCCAAGAAAC----------TGTCATTAAACCG-CTGGAAGGGCCAACATG-------TGT--------------------------GCTCC------------------------------------------------------------------------------T----ATG-------GAT-TGTGTGCTTGTG------------TGT-------------------------GTTATTTGGAGTGGCGGGGAGTGGGTGCGGG--------TGC------------------GGAAAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAG---T-CCC--------CGCAC---------------------GACCACC-----C---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AATGCTA------------------TTG------CTGTTGT-------AC--------------GAGTATCGACGGCA--------------------------TTCTGA-GCC----------CGCC-CC------------AG-------CC-------CGTA----------T---T--------------CCTGCCAAGAAAC----------TGTCATTAAACCG-CTGGAAGGGCCAACATG-------TGT--------------------------GCTCA------------------------------------------------------------------------------T----ATG-------GATTTGTGTGCTTGTG------------TGT-------------------------GTTCCTTGGAGTGGCGGG----GAGT--GGG--------TGC------------------GGGAAAAG-TAATAAAAACGAGGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAG---T-CCC--------CGCAC---------------------GACCACC-----C---SizeHit CountTotal NormTotal
No Reads
dp5
AATACTA------------------TTG------CTGTTGG---------------------------ATCGACGGCA--------------------------CTGTAA--CC------C---TGCC-CC------------GT-------CA-----------------------------------GACCATC---------AC----------TGTCATTACACTG-CCGG---------CGTGTGGCATGTGAGTGTGTGGTGCCGAGTATCTTCGTATAC---TCGTATCTTCGTGCTGTGGTGCGGGTGCCGCTGGTTCTGGTTCTCGTGGGTGGGTGGGTGTTTGC----TT-GATTGGTATGTATG-TATGTGGGTGTGTGTGTGTGTG------------TGT-------------------------GT--------------------G----------------TGTGGGGTGGGGTGGGGAG-GGGGGAAAG-TAATAAAAACGAAGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAG-----CCC--------CGCATT-------------------G----AGA-----CCCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTG------------TGT-------------------------GT--------------------G----------------TGTGG.....................................................................................................................................................26200.1020000002000
droPer2
AATACTA------------------TTG------CTGTTGG---------------------------ATCGACGGCA--------------------------CTGTAA--CC------C---TGCC-CC------------GT-------CA-----------------------------------GACCATC---------AC----------TGTCATTACACTG-CCGG---------CGTGTGGCATGTGAGTGTGTGGTGCCGAGTATCTT------T-----GTATCTTCGTGCTGTGGTGCGGGTGCTGCTGGTTCTGGTTCTCGTGGGTGGGTGGGTGTTTGC----TT-GATTGGTATGTATG-T-----------------------------------------------------------------------------------ATGTGGGTGTGTGTGTGTGTGGGGTGGGGTGGGGAGGGGGGGAAAG-TAATAAAAACGAAGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACATACAG-----CCC--------CGCATT-------------------C----AGA-----CCCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ATGGCAT------------------TTG------TTGTTGA---------------------------ATCGATGGCAA----------------------GTCTTTC---GCCCGATTCC---CATA-CC------------TCCTT----CCCGCTTA-----------------------A---TTCCCGACCCT-------ATTTG-GGTCGCTGTCATTTAACTA-CTTG---TGTCACTCTG-------TGT---------------------------C----GGTG----------------------------------------------------------TCTGTAT-----------------------------------------------------------------------------------------------------GTGTCGGTG--------TGA--------GGGAGGGC-TGGGCAAAA-TAATAAAAACGAAGCAAACAATTGAAAATATTTACACAGGACACTTGTTATCACAAAGACACACAC---ACACA--------CACATTCACACAAACACA-------CACACAGG-----CCCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
ATTGCCGCTGTAGTTATTCCTGTTGTTGTTGTTGTTATTGTCATTGT--TGTTGTT-GTTG---TACCATCGATGACA--------------------------AAC----ACC------C---TCCT-TAGTGTATAGTACCCACTTCTCAC--------------------------T----------CCC-----ACAACCAACTTT-GGGCGGCGCCATTTAACCA-GTTT--------------------------------------------------T-----GAA----------------------------------------------------------TAATCGAGC------T----GG----------------------TGTGTGTGC-------------------------------------------------------GTGTCGGTGTGTGTGGGTGT------------------GGGAAAAG-TAATAAAAACGAAACAAACAATTGAAAATATTTACACAGGACACTTGCTATCATAAAGATATACAGTGCCTCCA--------CAGATACACCCACACATA-------CACCGACT-----CATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
ATTGCTGCTGTAGTTGC--TTGTCGCAGTTGTTGTTGTTGTTATTGT--TGTTGT----------TGTATCGATGATA--------------------------AACACA-ATC------C---AGCA-CT------------GAGTTTTAACC-------CCAA----------C---T--------------GATGCCAGGCAACTTTGGTTCGGCGCCATTTAACCA-GACGAG-------------------------------------------------------AG----------------------------------------------------------TAATCGAGT------T----TT----------------------TATGTGTGTG--TGTGTNNNNNNNNNNNNNNNNNNNNNNNNNT--------------------CCT---ACAG--------TGC------------------TTGAATAGATACAAGCACCCACACAAACAAACACCAACACTCACACACA-CAC----AACCACACATACCCACAC---ACACA--------CACACA------CACACCCACCAACACATAGAT--------TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACAC---ACACA--------CACACA------C.............................19200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCACAC---ACACA--------CACACA------CAC...........................23200.051000010
droGri2
ATTAAGA-----GTTAA---TGTTGTTG------TTGTTGTTCCTG--TTGTTTTTAGC------TGTATCGATGACAAACACACATAGCTCTCGCTAAGCGCCTTTG---ACGCGATAC-----------------------------------------------------------------------CCGCA------------TT-GGGCGGCAACATTTAGACA-GTC-----------------------------------------------------------------------------------------------TTATAGTGTGTGTGTGTGTGTTTTTTGTGTGT------T----TA----------------------TG------------TGT-------------------------G--------------------TGTGTGTGTG--------TAT------------------TGGAAAAG-TAATAAAAACGAAGC-------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:51 PM