ID:dsi_15238 |
Coordinate:3l:7871650-7871757 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_7871369_7872200_-]; Antisense to intron [3l_7867500_7873906_+]; CDS [3l_7871381_7872200_-]
No Repeatable elements found
| ################################################################################################################################################################################################################ TAATAAAAATGTGGTCAAGATTCTTTCAGAAATGGAGTCCAGCATCTGCAGTAAGTTTTTATTCATAGCTGATCCGGGATATTGGAGATATTCAAATATGCATAACCCCTATGCTCAAAATACTTCTTTTGAAATATTAAACACTTCCATTACCGCAGAAAATATAGAAGAAATATTCGACAAATATAGAAAGATCGCTGGCACAAAG **************************************************.....((...................((.((.((((((((((((((...(((((.....))))).............)))))).)))).......)))).))))..))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
M024 male body |
SRR553488 RT_0-2 hours eggs |
M053 female body |
M023 head |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................TGAGTTTTTTTTGATAGCTGAT....................................................................................................................................... | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................................AGAAAATATAGAAGAA.................................... | 16 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................................................................TATAGACAGATCGCTG........ | 16 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................TAGATTCTTTCTGAAATGGTG........................................................................................................................................................................... | 21 | 3 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................ATTCGTGGCTGATCCGGGTT................................................................................................................................ | 20 | 3 | 6 | 0.17 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CATTCAGGGCTGATCCGGG.................................................................................................................................. | 19 | 3 | 13 | 0.15 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
| ....................................................................CTGATCGCGGATAGTGGAGA........................................................................................................................ | 20 | 3 | 7 | 0.14 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .................................GGAGTCCAACATGTGCA.............................................................................................................................................................. | 17 | 2 | 19 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CATTCAGGGCTGATCCGG................................................................................................................................... | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ................................................................AAAGCTGATCCGGGTT................................................................................................................................ | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ............................................................................................................................................................AGATAATATAGAAGA..................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
|
ATTATTTTTACACCAGTTCTAAGAAAGTCTTTACCTCAGGTCGTAGACGTCATTCAAAAATAAGTATCGACTAGGCCCTATAACCTCTATAAGTTTATACGTATTGGGGATACGAGTTTTATGAAGAAAACTTTATAATTTGTGAAGGTAATGGCGTCTTTTATATCTTCTTTATAAGCTGTTTATATCTTTCTAGCGACCGTGTTTC
**************************************************.....((...................((.((.((((((((((((((...(((((.....))))).............)))))).)))).......)))).))))..))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|
| ................................................................TATCGACTAGGCTCT................................................................................................................................. | 15 | 1 | 10 | 0.10 | 1 | 1 | 0 |
| ....................ATGAAAGTCTTCACCTC........................................................................................................................................................................... | 17 | 2 | 14 | 0.07 | 1 | 0 | 1 |
| ......................................................................................................................................................ATGGCGTCTTTTTTAT.......................................... | 16 | 1 | 18 | 0.06 | 1 | 1 | 0 |
Generated: 04/24/2015 at 10:30 AM