ID:

dsi_1519

 Coordinate:

3r:24782399-24782548 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.7 -21.3 -21.3

Flybase annnotation

exon [3r_24782344_24782398_+]; CDS [3r_24782344_24782398_+]; intron [3r_24782399_24789536_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTGTAACTCAGTTCGCTGCGCTTTCGCCAATGCTAACACATATATTTTATCGCCTGCATAGCACCGTTTTTGGCCATTATAGCCGTAGCCTTTGAAATTGCCTTGTTTTTTTCTGATTCAATCAGTAGATCGACACCAGCGGATTTGGTAATGATAGAGCTAGCACAGCAGTTCATTCG
**************************************************.......................((((.((((...((((((((...((((((((((.......................)))))......)))))......)).))))))..))))..))))...........(((((...)))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
......................................................................................................................................................TAGCCGTAGCCTTTGAAATTGCCTTGTTT....................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................TCAATCAGTAGATCGACACCAGCGGATT.................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................CAATCAGTAGATCGACACCAGAGGA.................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
...............................TCCGGATCGACCATGTGA......................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0
....TATCGAGCGCACATTCAAGCAAGA.............................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................AATCAGTAGATCGACACCAGCGGATT.................................. 26 0 1 1.00 1 0 0 0 0 1 0 0
............................GTTTCCGGATCGACCATTGAAA........................................................................................................................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0 0
................................CCGGATCGACCATGTGAAC....................................................................................................................................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................................................TTGTTGTTTTCTGATTCAAGGAG...................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................................................................ATAGCCGTAGCCTTTGAAATTGCCTT........................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TTTGGTAATGATAGAGCTAGCACAGCAG........ 28 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TGGTAATTCTAGAGCTAGCG.............. 20 3 6 0.17 1 0 0 0 0 0 1 0
....................................ATCGATCATGTGAAGT...................................................................................................................................................................................................... 16 1 7 0.14 1 0 0 0 0 0 0 1
........................................................................................................................TCGCCTGCGAAGCACCGTAT.............................................................................................................. 20 3 8 0.13 1 0 0 0 0 0 0 1
..................................................................................................................................AGCACCGTCTTTGGC......................................................................................................... 15 1 19 0.05 1 0 0 0 0 0 1 0
............................................................................................................................................................................................TCAGTCGGTAGAACGACA............................................ 18 3 20 0.05 1 0 0 0 0 0 1 0

Anti-sense strand reads

TGCAATAGCTCGCGTGTAAGTTCGTTCTCAAAGGCCTAGCTGGTACACTTCATGCTTTAGACAAGATATTAGACATTGAGTCAAGCGACGCGAAAGCGGTTACGATTGTGTATATAAAATAGCGGACGTATCGTGGCAAAAACCGGTAATATCGGCATCGGAAACTTTAACGGAACAAAAAAAGACTAAGTTAGTCATCTAGCTGTGGTCGCCTAAACCATTACTATCTCGATCGTGTCGTCAAGTAAGC
**************************************************.......................((((.((((...((((((((...((((((((((.......................)))))......)))))......)).))))))..))))..))))...........(((((...)))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
..................................CCTAGCTTGTACACT......................................................................................................................................................................................................... 15 1 4 5.00 20 20 0 0 0 0 0 0 0
.............................................................................................AAGCGGCTTCGATTGGGTA.......................................................................................................................................... 19 3 11 0.82 9 0 6 0 0 2 0 1 0
....ATTGCTCAAGTGTAAGTTCGT................................................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 1 0 0 0 0 0
.............................................................................................AAGCGGCTTCGATTGAGTA.......................................................................................................................................... 19 3 12 0.50 6 0 4 0 0 1 0 1 0
..................AGGTCGTCCTCAAAGGCCTT.................................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 1 0 0
................................................................................................................................................................................AAAAAAATATTAAGTTAGCCAT.................................................... 22 3 5 0.20 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................ATAAATCAAGACTAAGTTAGT....................................................... 21 3 5 0.20 1 0 0 0 1 0 0 0 0
............................................................................................GAAGCGGCTTCGATTGTGTA.......................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0 0
.............................................................................................AAGCGGCTTCGATTGAGT........................................................................................................................................... 18 3 20 0.10 2 0 0 0 0 2 0 0 0
............................................................AAAAGATATTAGACATT............................................................................................................................................................................. 17 1 12 0.08 1 0 0 0 0 0 0 0 1
........................................................................................................................................................CGGCTTCGGAAACTTTTA................................................................................ 18 2 15 0.07 1 0 0 0 0 0 0 1 0
................................................................................TCAGGCGGCGCGAAATCGG....................................................................................................................................................... 19 3 15 0.07 1 0 1 0 0 0 0 0 0
..............................................................................AGTCAAGCGACGCAA............................................................................................................................................................. 15 1 16 0.06 1 1 0 0 0 0 0 0 0
.................................................TCAAGCTTTAGACAA.......................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................GGCAGCTAGCAGTGGTCGC...................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:24782349-24782598 + dsi_1519 ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTGTAA------------C-----TCA-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACATAT-----------A---------------------T---TTTATCGCCTGCATAGCACCGTTT-TTGGCCAT---TAT-AGCCGTAGCC---TTTG------A-----AATTGCCTTGTTTT-T-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGCGGA------TTTGGTAATGATAGAGCTAGCAC----------A-------------------GCAG-T--TCATTCG
droSec2 scaffold_706:1090-1339 + ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTGTAA------------C-----TCA-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACATAT-----------A---------------------T---TTTATCGCCTGCATAGCACCGTTT-TTGGCCAT---TAT-AGCCGTAGCC---TTTG------A-----AATTGCCTTGTTTT-T-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGCGGA------TTTGGTAATGATAGAGCTAGCAC----------A-------------------GCAG-T--TCATTCG
dm3 chr3R:25423146-25423395 + ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTGTAA------------C-----TCA-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACATAT-----------A---------------------T---TTTATCGCTTGCATAGCACCGTTT-TTGGCCAT---TAT-AGCCGTAGCC---TTTG------A-----AATTGCCTTGTTTT-T-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTGGTAATGATAGAGCTATCAC----------A-------------------GCAG-T--TCATTCG
droEre2 scaffold_4820:2577013-2577261 - ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTTTATAATCTGTAA------------C-----TCA-------------GTTCGCTGCGCCT-TCGC-----TAATG-CTAACACATAT-----------A---------------------T---TTTATCGCTTGCATAGCACCGTTT-TTGGTCAT---TAT-AGCCATAGAC---TTTG------A-----AATTGCCTTGTTTT-------------CT---------------CTGATTCAATTAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTGGTAATGATAGAGCTATCAC----------A-------------------GCAG-T--TCATTCG
droYak3 3R:21052526-21052781 - ACGTTATCGAGCGTACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTGTAA------------C-----TCA-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACATAT-----------A---------------------T---TTTATCGCTTGCATAGCACCGTTTTTTGGTCAT---TAT-AGCCATAGCC---TTTG------A-----AATTGCCTTGTTTT-TTTTTT------TT---------------TTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTGGTAATGATAGAGCTATCAC----------A-------------------GCAG-T--TCATTCG
droEug1 scf7180000409787:119727-119977 - ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTATAA------------C-----TCG-------------GTTTGCTGCGCTT-TCGC-----CAATG-CTAACACTCAT-----------A---------------------T--TTTTATCGCTTGCATAGCACCGTTTTTTGGTCAT---TTT-------AGCT---TTTG------A-----AATTGCCTTGTTTTGT-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CTGAGGA------TTTGGTAATGATTGTGCTATCACTATCAC----A-------------------GT---T--TCATTCG
droBia1 scf7180000302136:2668011-2668254 - ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTATAA------------C-----TTG-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACACAT-----------TTA-------------------T--TTTTATCGCTTGCATAGCACCGTTTTTTGGTCAT---TAT-------AGCC---TTTG------A-----AATTGCCTTGTTT--------------TT---------------CTGATTCAATCAGTAGATCTA-----------------------CAC--------------------------------------------------CAGCGGA------TTTGGTAATGATTGTGCTATCAC----------A-------------------GT---T--TCATTCG
droTak1 scf7180000415367:595806-596061 + ACATTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGATGTACGAAATATTTTCTATAACATATAA------------C-----TCG-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACACTT-----------ATATA-T--TTA----------T---TTTATCGCTTGCATAGCACCGTTT-TTGGTCAT---T-----CGATAGCC---TTTG------A-----AATTGCCTTGTTTTGT-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTGGTAATGATTGAGCTGTCGC----------A-------------------GTTGTT--TCATTCG
droEle1 scf7180000491280:1658553-1658795 + ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTCTAA------------C-----TCG-------------GTTCGCTGCGCTT-TCGC-----CACCG-CTAACATACAT-----------A---------------------T--TTTAATCGCTTGCATAGCACCGTTT-TTGGTCAT---TAT-------AGCC---TTTG------A-----AATTGCCTTGTTTT-T-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------AAGCGGA------TTTGGTAATGATTGAGATATCAC----------A-------------------GT---T--TCATTCG
droRho1 scf7180000780093:264244-264484 - ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTATAA------------C-----TCG-------------GTTCGCTGCGCTT-TCGC-----CACTG-CTAACACACAT-----------A---------------------T---TTTATCGCTTGCATAGCACCGTTT-TTGATCAT---TAT-------AGCC---TTTG------A-----AATTGCCTTGTTTT-------------TT---------------CTGATTTAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGCGGA------TTTGGTAATGATTGAGCTATCAC----------A-------------------G--A-T--TCATTCG
droFic1 scf7180000453826:1183060-1183299 - ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTCAAGTACGAAATCTGTTCTATAATCTATAA------------C-----TTG-------------GTTCGCTGCGCTT-TTGC-----CACTG-CTAACACATAT-----------A---------------------TT-TTTTATCGCTTGCAAAGCACAGTTT-TTGGTCAT---TAT-------AGCT---TTTG------A-----AATTGCCTTAGT----------------T---------------TTGATTTAATCAGTAGATCGA-----------------------GAC--------------------------------------------------CAGAGGA------CTTGGTAATGATTGAGTTATCAC-------------------------------TAT-T--TTATTCG
droKik1 scf7180000302404:141043-141290 - ACGTTATCGAGCGCACATTCAAGCAGGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTTTTTTATAATCTATAA------------ATAATCTTG-------------GAAC-------AG-TTGCGCTT-------TTAACACACAT-----------A---------------------TTTTATTATCGCT--------------T-TTTGCCATCATTATTATATATAGCC---TTTT------G-----AGTT---TTGCTTC-TTAATACTTAGTGT---------------ATGGTTCAATCGGCAAA----------------------------------AGAC------------------------------------------TAAGGTGAAAGATTTTGGTTATGATT-----------TGAGCTAGCA-------------------GT---C--CTATTCG
droAna3 scaffold_12911:5118052-5118268 + ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTTTATAATCTATAAT-----------C-----TCG-------------AATCGCTGCGCTTCTTGC-----CACTG-CTAACACACAC-----------ATAAA-CGCTTC----------T--CTTTATCGCTTGCATACCACCGAT--TTGATCAT---TAT-------AGCC---TTTG------G-----AATTGCCTTACTTA-T-----------TAGATTTGGCCTCAGATCAGATCCCATCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396640:1952372-1952625 + ACGTTATCGAGCGCACATTCAAGCAAGAGTTCCCGGATCGACCATGTGAAGTACGAAATCTGTTTTATAATCTATAAT-----------C-----TCG-------------AATCGCTGCGCTTCTTGC-----CACCG-CTAACACACAC-----------ATACT-CGCTTC----------T--CTTTATCGCTTGCATAGCACAGTT--TTGATCAT---TAG-------AGCC---TTTT------A-----AATTGCCTTACTTA-------------AT---------------ACAATTTAATCAGTAACTAAATCA--------------------TTC--------------------------------------------------AAGAGGA------TTTGGCGATGATTGA--TA--------------A-------------------GACG-TTGCCATCAG
dp5 2:2294381-2294660 + ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGCAATCTTTTTTATAATCTATAAC-----------C-----TCC-------------GCTTGCCGCGCTT-TTGC-----CACTG-CTAACACACGT-----------T---------------------A--TGTTATCGCTTA---------------TTATCATCAATAT-------TCTA---TTTG------------AATTGCTTTC-----G-----------TA---------------CTTAT-AAGTCGGTAGATCGATCGTTCGTTGGTAGCCGTCCCATCAGCCGAGGACTTGATTTA-----------------------------------------------------CAGGATA----TATCACTCGCACTGGCAGTCGACACACACCATACCCATTG-T--TCATTTG
droPer2 scaffold_7:2459541-2459820 + ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGCAATCTTTTTTATAATCTATAAC-----------C-----TCC-------------GCTTGCCGCGCTT-TTGC-----CACTG-CTAACACACGT-----------T---------------------T--TGTTATCGCTTA---------------TCATCATCAATAT-------TCTA---TTTG------------AATTGCTTTC-----G-----------TA---------------CTTAT-AAGTCGGTAGATCGATCGTTCGTTGGTAGCCGTCCCATCAGCCGAGGACTTGATTTA-----------------------------------------------------CAGGATA----TATCACTCGCACTGGCAGTCGACACACACCATACCCATTG-T--TCATTTG
droWil2 scf2_1100000004902:5692616-5692766 + ATGTTATCGAGCGCACATTTAAGCAAGAGTTCCCGGATCGACCATGTGAAGTACGAAATCTATTTTATAATCTTTAAA-----------C-----TTCTATTGCCGACTGCATTTGCTGAGCTT-TTGCGCTTTTAATGCCTAACACAATT-----------T------------------------CGTTATCGCTTGCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12855:767126-767346 + ACGTTATCGAGCGCACATTCAAGGAGGTTTTTCCAGATAGTCCATGTGAAGTACGAAACATTTTTTACAACATTTAAAAATTAAATTTTC-----TGA-------------TTACGCTGCGTATTTTAC-----TGATG-CTTATTGATTT-----------TGATTATGCTTTTAAGTTCACAT------TTAGCTTTCTTATTATCT---------------------------------AGA------TTCATTAACATTTTTGCTTT-TTCTTGC---------------------------T---------------------------------------------------------------------------------------------------------------------TAGCTATCAG----------A-------------------TTAT-T--TCACTT-
droMoj3 scaffold_6540:12205191-12205440 - ACGTTATTGAGCGCACATTCAAGGAGGTATTTCCAGAGAGTCCATGTGAAGTACGAAATATTTTTTACAACATTTAA----------------------------------AATCGCTGCGAATCTTGC-TTATTGATG-CTTATTCATTT-----------TCATT-TGCTTT-------------------------T-AAGTTTTGCTT-TAGCTCTT---T-----TCATATTC---TAGA------T-----GATTGCCCAGCTTCAG-----------TT-----------------CA-----------------------------------------------------------CTCTATCTCTATCCTCTTCTTTCACATCTAT---CACCTAA------TTCAATAAT----CTGAAATCAC----------A-------------------ATTT-T--CTATTCT
droGri2 scaffold_14906:1868344-1868634 + ACATTATCGAGCGCACATTCAAGGCGGCATTTCCGGATAAACCATGTGAAGTACGAAATATTTTTTTCAATCTTTAAAAGTTGCAATTTC-----TGA-------------TTACGCTGCACATTTTAT-----TGATG-CTTATATCGTTTTCTATAATTTTGCTTAAG----------------------------------------------CTTT----C-----TCATTTTCTTTTAGGTTCATTTTCATTTCCATTGTTGCTTT-T-TATGC---------------------------TTATTTAATAGCTTAT-----------------------CT-----------------CTCTCTCTCTATCTA--TCTCTCACAACCACCACTACTGTA------ACTTGAAACTAATGTAGAATCAC----------T-------------------ATTG-T--TTATTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTGTAA------------C-----TCA-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACATAT-----------A---------------------T---TTTATCGCCTGCATAGCACCGTTT-TTGGCCAT---TAT-AGCCGTAGCC---TTTG------A-----AATTGCCTTGTTTT-T-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGCGGA------TTTGGTAATGATAGAGCTAGCAC----------A-------------------GCAG-T--TCATTCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................T-AGCCGTAGCC---TTTG------A-----AATTGCCTTGTTT.................................................................................................................................................................................................................2911.00100000010000000000
..................................................................................................................................................................................................................................................................................................................TCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGCGGA------TT..................................................................2811.00100000010000000000
...............................TCCGGATCGACCATGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000100000
....TATCGAGCGCACATTCAAGCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
....................................................................................................................................................................................................................................................................................................................AATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGCGGA------TT..................................................................2611.00100000000000010000
................................CCGGATCGACCATGTGAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.................................................................................................................................................................................................................................AT-AGCCGTAGCC---TTTG------A-----AATTGCCTT.....................................................................................................................................................................................................................2611.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTAATGATAGAGCTAGCAC----------A-------------------GCAG-..........2811.00100000010000000000
droSec2
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTGTAA------------C-----TCA-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACATAT-----------A---------------------T---TTTATCGCCTGCATAGCACCGTTT-TTGGCCAT---TAT-AGCCGTAGCC---TTTG------A-----AATTGCCTTGTTTT-T-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGCGGA------TTTGGTAATGATAGAGCTAGCAC----------A-------------------GCAG-T--TCATTCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................CAAGCAAGAGTTTCCGGATCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010010
............................GTTTCCGGATCGACCATGTGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010001
.....................AGCAAGAGTTTCCGGATCGACCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010100
...........................AGTTTCCGGATCGACCATGT................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010010
....TATCGAGCGCACATTCAAGCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010010
dm3
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTGTAA------------C-----TCA-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACATAT-----------A---------------------T---TTTATCGCTTGCATAGCACCGTTT-TTGGCCAT---TAT-AGCCGTAGCC---TTTG------A-----AATTGCCTTGTTTT-T-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTGGTAATGATAGAGCTATCAC----------A-------------------GCAG-T--TCATTCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................AAGCAAGAGTTTCCGGATCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACGTTATCGAGCGCACATTCAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAAGCAAGAGTTTCCGGATCGACCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................GTTTCCGGATCGACCATGTGAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTTATCGAGCGCACATTCAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAGTTTCCGGATCGACCATGTGAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCAAGAGTTTCCGGATCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGCAAGAGTTTCCGGATCGACCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................TTTCCGGATCGACCATGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGTTTCCGGATCGACCATGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------....................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------T...................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TATCGAGCGCACATTCAAGCAAGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATTCAAGCAAGAGTTTCCGGATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGTTTCCGGATCGACCATGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000
....................AAGCAAGAGTTTCCGGATCGACCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGATAGAGCTATCAC----------A-------------------GCAG-T--.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................AGCAAGAGTTTCCGGATCGACCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............ACATTCAAGCAAGAGTTTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................ATCTGTAA------------C-----TCA-------------GTTCGCTGCGCT....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............GCACATTCAAGCAAGAGTTTCCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAGCTATCAC----------A-------------------GCAG-..........1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGATAGAGCTATCAC----------A-------------------GC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................GCAAGAGTTTCCGGATCGACCATGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGAGTTTCCGGATCGACCATGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................CAAGCAAGAGTTTCCGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AAGAGTTTCCGGATCGACCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTGGT..............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCAAGCAAGAGTTTCCGGATCGACCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................GAGTTTCCGGATCGACCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................AGAGTTTCCGGATCGACCATGTGAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CGTAGCC---TTTG------A-----AATTGCCT......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GAGCGCACATTCAAGCAAGAGTTTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTG................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............GCACATTCAAGCAAGAGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CATAT-----------A---------------------T---TTTATCGCTTGCAT.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TTCAAGCAAGAGTTTCCGGATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGAGTTTCCGGATCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAAGAGTTTCCGGATCGACCATGTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................C-----TCA-------------GTTCGCTGCGCTT-TCGC-----C........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAATGATAGAGCTATCAC----------A-------------------GCAG-T--.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................ATGTGAAGTACGAAATCTGTTCTAT...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTAATGATAGAGCTATCAC----------A-------------------GCAG-T--.......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGTTATCGAGCGCACATTCAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AC--------------------------------------------------CAGAGGA------TTTGGTAATGATAGGTG...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................GCGCTT-TCGC-----CAATG-CTAACACA...........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CATTCAAGCAAGAGTTTCCGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGCAAGAGTTTCCGGATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTGG...............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................T---TAT-AGCCGTAGCC---TTTG------A-----AATTGC........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AAGTACGAAATCTGTTCTATAATC.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................TCAAGCAAGAGTTTCCGGATCGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................AAGAGTTTCCGGATCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AA------------C-----TCA-------------GTTCGCTGCGCTT-TCGC-----CAAT.....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCAAGCAAGAGTTTCCGGATCGACCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................C--------------------------------------------------CAGAGGA------TTTGGTAATGATAGAGC...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droEre2
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTTTATAATCTGTAA------------C-----TCA-------------GTTCGCTGCGCCT-TCGC-----TAATG-CTAACACATAT-----------A---------------------T---TTTATCGCTTGCATAGCACCGTTT-TTGGTCAT---TAT-AGCCATAGAC---TTTG------A-----AATTGCCTTGTTTT-------------CT---------------CTGATTCAATTAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTGGTAATGATAGAGCTATCAC----------A-------------------GCAG-T--TCATTCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............GCACATTCAAGCAAGAGTTTCCGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
....................AAGCAAGAGTTTCCGGATCGACCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.......................CAAGAGTTTCCGGATCGACCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..................TCAAGCAAGAGTTTCCGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
droYak3
ACGTTATCGAGCGTACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTGTAA------------C-----TCA-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACATAT-----------A---------------------T---TTTATCGCTTGCATAGCACCGTTTTTTGGTCAT---TAT-AGCCATAGCC---TTTG------A-----AATTGCCTTGTTTT-TTTTTT------TT---------------TTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTGGTAATGATAGAGCTATCAC----------A-------------------GCAG-T--TCATTCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................ATTCAAGCAAGAGTTTCCGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....TATCGAGCGTACATTCAAGCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............................TTCCGGATCGACCATGTGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
................................................................................................................................................................................................................GTTTTTTGGTCAT---TAT-AGC........................................................................................................................................................................................................................................................1911.00100100000000
.................................................................................................................................................................................................................................AT-AGCCATAGCC---TTTG------A-----AATTGCCTTGT...................................................................................................................................................................................................................2811.00101000000000
..............ACATTCAAGCAAGAGTTTCCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....ATCGAGCGTACATTCAAGCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
...................CAAGCAAGAGTTTCCGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
................ATTCAAGCAAGAGTTTCCGGATCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...................CAAGCAAGAGTTTCCGGATCGACCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
................ATTCAAGCAAGAGTTTCCGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................GAGGA------TTTGGTAATGATAGAGCT..................................................2311.00100000010000
droEug1
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTATAA------------C-----TCG-------------GTTTGCTGCGCTT-TCGC-----CAATG-CTAACACTCAT-----------A---------------------T--TTTTATCGCTTGCATAGCACCGTTTTTTGGTCAT---TTT-------AGCT---TTTG------A-----AATTGCCTTGTTTTGT-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CTGAGGA------TTTGGTAATGATTGTGCTATCACTATCAC----A-------------------GT---T--TCATTCGSizeHit CountTotal NormTotal
No Reads
droBia1
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTATAA------------C-----TTG-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACACAT-----------TTA-------------------T--TTTTATCGCTTGCATAGCACCGTTTTTTGGTCAT---TAT-------AGCC---TTTG------A-----AATTGCCTTGTTT--------------TT---------------CTGATTCAATCAGTAGATCTA-----------------------CAC--------------------------------------------------CAGCGGA------TTTGGTAATGATTGTGCTATCAC----------A-------------------GT---T--TCATTCGSizeHit CountTotal NormTotal
No Reads
droTak1
ACATTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGATGTACGAAATATTTTCTATAACATATAA------------C-----TCG-------------GTTCGCTGCGCTT-TCGC-----CAATG-CTAACACACTT-----------ATATA-T--TTA----------T---TTTATCGCTTGCATAGCACCGTTT-TTGGTCAT---T-----CGATAGCC---TTTG------A-----AATTGCCTTGTTTTGT-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGAGGA------TTTGGTAATGATTGAGCTGTCGC----------A-------------------GTTGTT--TCATTCGSizeHit CountTotal NormTotal
No Reads
droEle1
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTCTAA------------C-----TCG-------------GTTCGCTGCGCTT-TCGC-----CACCG-CTAACATACAT-----------A---------------------T--TTTAATCGCTTGCATAGCACCGTTT-TTGGTCAT---TAT-------AGCC---TTTG------A-----AATTGCCTTGTTTT-T-----------TT---------------CTGATTCAATCAGTAGATCGA-----------------------CAC--------------------------------------------------AAGCGGA------TTTGGTAATGATTGAGATATCAC----------A-------------------GT---T--TCATTCGSizeHit CountTotal NormTotal
No Reads
droRho1
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTCTATAATCTATAA------------C-----TCG-------------GTTCGCTGCGCTT-TCGC-----CACTG-CTAACACACAT-----------A---------------------T---TTTATCGCTTGCATAGCACCGTTT-TTGATCAT---TAT-------AGCC---TTTG------A-----AATTGCCTTGTTTT-------------TT---------------CTGATTTAATCAGTAGATCGA-----------------------CAC--------------------------------------------------CAGCGGA------TTTGGTAATGATTGAGCTATCAC----------A-------------------G--A-T--TCATTCGSizeHit CountTotal NormTotal
No Reads
droFic1
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTCAAGTACGAAATCTGTTCTATAATCTATAA------------C-----TTG-------------GTTCGCTGCGCTT-TTGC-----CACTG-CTAACACATAT-----------A---------------------TT-TTTTATCGCTTGCAAAGCACAGTTT-TTGGTCAT---TAT-------AGCT---TTTG------A-----AATTGCCTTAGT----------------T---------------TTGATTTAATCAGTAGATCGA-----------------------GAC--------------------------------------------------CAGAGGA------CTTGGTAATGATTGAGTTATCAC-------------------------------TAT-T--TTATTCGSizeHit CountTotal NormTotal
No Reads
droKik1
ACGTTATCGAGCGCACATTCAAGCAGGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTTTTTTATAATCTATAA------------ATAATCTTG-------------GAAC-------AG-TTGCGCTT-------TTAACACACAT-----------A---------------------TTTTATTATCGCT--------------T-TTTGCCATCATTATTATATATAGCC---TTTT------G-----AGTT---TTGCTTC-TTAATACTTAGTGT---------------ATGGTTCAATCGGCAAA----------------------------------AGAC------------------------------------------TAAGGTGAAAGATTTTGGTTATGATT-----------TGAGCTAGCA-------------------GT---C--CTATTCGSizeHit CountTotal NormTotal
No Reads
droAna3
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGAAATCTGTTTTATAATCTATAAT-----------C-----TCG-------------AATCGCTGCGCTTCTTGC-----CACTG-CTAACACACAC-----------ATAAA-CGCTTC----------T--CTTTATCGCTTGCATACCACCGAT--TTGATCAT---TAT-------AGCC---TTTG------G-----AATTGCCTTACTTA-T-----------TAGATTTGGCCTCAGATCAGATCCCATCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............GCACATTCAAGCAAGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................................................................................................................................................................T-------AGCC---TTTG------G-----AATTGCCTTACT..................................................................................................................................................................................................................2211.001000001
.....ATCGAGCGCACATTCAAGCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.................TTCAAGCAAGAGTTTCCGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
ACGTTATCGAGCGCACATTCAAGCAAGAGTTCCCGGATCGACCATGTGAAGTACGAAATCTGTTTTATAATCTATAAT-----------C-----TCG-------------AATCGCTGCGCTTCTTGC-----CACCG-CTAACACACAC-----------ATACT-CGCTTC----------T--CTTTATCGCTTGCATAGCACAGTT--TTGATCAT---TAG-------AGCC---TTTT------A-----AATTGCCTTACTTA-------------AT---------------ACAATTTAATCAGTAACTAAATCA--------------------TTC--------------------------------------------------AAGAGGA------TTTGGCGATGATTGA--TA--------------A-------------------GACG-TTGCCATCAGSizeHit CountTotal NormTotal
No Reads
dp5
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGCAATCTTTTTTATAATCTATAAC-----------C-----TCC-------------GCTTGCCGCGCTT-TTGC-----CACTG-CTAACACACGT-----------T---------------------A--TGTTATCGCTTA---------------TTATCATCAATAT-------TCTA---TTTG------------AATTGCTTTC-----G-----------TA---------------CTTAT-AAGTCGGTAGATCGATCGTTCGTTGGTAGCCGTCCCATCAGCCGAGGACTTGATTTA-----------------------------------------------------CAGGATA----TATCACTCGCACTGGCAGTCGACACACACCATACCCATTG-T--TCATTTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..GTTATCGAGCGCACATTCAAGCAAGAGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
............................GTTTCCGGATCGACCATGTGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001
............GCACATTCAAGCAAGAGTTTCCGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
................ATTCAAGCAAGAGTTTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................CAAGCAAGAGTTTCCGGATCGACCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
..............................TTCCGGATCGACCATGTGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................ATTTA-----------------------------------------------------CAGGATA----TATCACTCG..........................................2111.0010100000000
........................AAGAGTTTCCGGATCGACCATGTGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
droPer2
ACGTTATCGAGCGCACATTCAAGCAAGAGTTTCCGGATCGACCATGTGAAGTACGCAATCTTTTTTATAATCTATAAC-----------C-----TCC-------------GCTTGCCGCGCTT-TTGC-----CACTG-CTAACACACGT-----------T---------------------T--TGTTATCGCTTA---------------TCATCATCAATAT-------TCTA---TTTG------------AATTGCTTTC-----G-----------TA---------------CTTAT-AAGTCGGTAGATCGATCGTTCGTTGGTAGCCGTCCCATCAGCCGAGGACTTGATTTA-----------------------------------------------------CAGGATA----TATCACTCGCACTGGCAGTCGACACACACCATACCCATTG-T--TCATTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................ATTCAAGCAAGAGTTTCCGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.006600000
...................CAAGCAAGAGTTTCCGGATCGACCATGT................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
.................TTCAAGCAAGAGTTTCCGGATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............CATTCAAGCAAGAGTTTCCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
...............CATTCAAGCAAGAGTTTCCGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................TTCAAGCAAGAGTTTCCGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................TAGATCGATCGTTCGTTGGTAC...............................................................................................................................................2211.001100000
................ATTCAAGCAAGAGTTTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droWil2
ATGTTATCGAGCGCACATTTAAGCAAGAGTTCCCGGATCGACCATGTGAAGTACGAAATCTATTTTATAATCTTTAAA-----------C-----TTCTATTGCCGACTGCATTTGCTGAGCTT-TTGCGCTTTTAATGCCTAACACAATT-----------T------------------------CGTTATCGCTTGCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................TTTAAGCAAGAGTTCCCGGATCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
..........................GAGTTCCCGGATCGACCATGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
....................AAGCAAGAGTTCCCGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
............................GTTCCCGGATCGACCATGTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
............................GTTCCCGGATCGACCATGT................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..............................TCCCGGATCGACCATGTGAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..................TTAAGCAAGAGTTCCCGGATCGACCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
............................GTTCCCGGATCGACCATGTGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.................................CGGATCGACCATGTGAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
...........CGCACATTTAAGCAAGAGTTCCCGGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
.....ATCGAGCGCACATTTAAGCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
droVir3
ACGTTATCGAGCGCACATTCAAGGAGGTTTTTCCAGATAGTCCATGTGAAGTACGAAACATTTTTTACAACATTTAAAAATTAAATTTTC-----TGA-------------TTACGCTGCGTATTTTAC-----TGATG-CTTATTGATTT-----------TGATTATGCTTTTAAGTTCACAT------TTAGCTTTCTTATTATCT---------------------------------AGA------TTCATTAACATTTTTGCTTT-TTCTTGC---------------------------T---------------------------------------------------------------------------------------------------------------------TAGCTATCAG----------A-------------------TTAT-T--TCACTT-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........GAGCGCACATTCAAGGAGGTTTTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000000000200000000000000000000000000
......................................AGTCCATGTGAAGTACGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................TTTTC-----TGA-------------TTACGCTGCGTAT...................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
ACGTTATTGAGCGCACATTCAAGGAGGTATTTCCAGAGAGTCCATGTGAAGTACGAAATATTTTTTACAACATTTAA----------------------------------AATCGCTGCGAATCTTGC-TTATTGATG-CTTATTCATTT-----------TCATT-TGCTTT-------------------------T-AAGTTTTGCTT-TAGCTCTT---T-----TCATATTC---TAGA------T-----GATTGCCCAGCTTCAG-----------TT-----------------CA-----------------------------------------------------------CTCTATCTCTATCCTCTTCTTTCACATCTAT---CACCTAA------TTCAATAAT----CTGAAATCAC----------A-------------------ATTT-T--CTATTCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........CGCACATTCAAGGAGGTATTTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........AGCGCACATTCAAGGAGGTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
ACATTATCGAGCGCACATTCAAGGCGGCATTTCCGGATAAACCATGTGAAGTACGAAATATTTTTTTCAATCTTTAAAAGTTGCAATTTC-----TGA-------------TTACGCTGCACATTTTAT-----TGATG-CTTATATCGTTTTCTATAATTTTGCTTAAG----------------------------------------------CTTT----C-----TCATTTTCTTTTAGGTTCATTTTCATTTCCATTGTTGCTTT-T-TATGC---------------------------TTATTTAATAGCTTAT-----------------------CT-----------------CTCTCTCTCTATCTA--TCTCTCACAACCACCACTACTGTA------ACTTGAAACTAATGTAGAATCAC----------T-------------------ATTG-T--TTATTCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:25 AM