ID:dsi_15188 |
Coordinate:2r:5460176-5460232 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [2r_5459990_5460175_+]; CDS [2r_5459990_5460175_+]; CDS [2r_5460233_5460390_+]; exon [2r_5460233_5460390_+]; intron [2r_5460176_5460232_+]
No Repeatable elements found
| ##################################################---------------------------------------------------------################################################## CAAGCTGGTTCAGATCGCTGGACCGCCGGGCCAAGAGCAGTCCCAAGGAGGTAGGAGCGATTTTCCTTCAAATTAGAGCTTTCATCAATTAGGCGCCTTCCTTTCAGCTCAATGTATCCGTGAACGGACACAGTGAGACCACTTCGAGCTTGAAGCG **************************************************..(((((((.....(((...((((.((.......))))))))))))..)))).....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR618934 dsim w501 ovaries |
SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ..AGCTGGTTCAGATCGCTGGAC...................................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .............ATCGCTGGACCGCCGGGC.............................................................................................................................. | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................................................................................CGTGAACGGACACAGTGAGACCAC............... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................CAAGTACATAGGAGCGATTT.............................................................................................. | 20 | 3 | 7 | 0.29 | 2 | 0 | 0 | 2 | 0 | 0 |
| ..........................................................................AGAGCTTGCATCAATT................................................................... | 16 | 1 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 |
| ........................................................TCGATTTTCCTTGAAATTA.................................................................................. | 19 | 2 | 8 | 0.13 | 1 | 0 | 0 | 0 | 1 | 0 |
| .....................................................................AAATGAGAGCTCTCATC....................................................................... | 17 | 2 | 11 | 0.09 | 1 | 0 | 1 | 0 | 0 | 0 |
| .........................GCGGGCCAAGAGCAGTGC.................................................................................................................. | 18 | 2 | 14 | 0.07 | 1 | 0 | 0 | 0 | 0 | 1 |
| ........................................................................TTAGAGGTGTCATCAAT.................................................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 |
|
GTTCGACCAAGTCTAGCGACCTGGCGGCCCGGTTCTCGTCAGGGTTCCTCCATCCTCGCTAAAAGGAAGTTTAATCTCGAAAGTAGTTAATCCGCGGAAGGAAAGTCGAGTTACATAGGCACTTGCCTGTGTCACTCTGGTGAAGCTCGAACTTCGC
**************************************************..(((((((.....(((...((((.((.......))))))))))))..)))).....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|
| ..............GGCGATCTGGTGGCCCGG............................................................................................................................. | 18 | 3 | 20 | 0.20 | 4 | 4 | 0 | 0 |
| ....................................................................TTTTAATCTCGAAAGT......................................................................... | 16 | 1 | 6 | 0.17 | 1 | 0 | 1 | 0 |
| ............CTGGCGATCTGGTGGCCCG.............................................................................................................................. | 19 | 3 | 8 | 0.13 | 1 | 1 | 0 | 0 |
| .....................................................................................................................................ACGCTGGTGAAGCCCGA....... | 17 | 2 | 10 | 0.10 | 1 | 0 | 1 | 0 |
| .............TGGCGATCTGGTGGCCCGG............................................................................................................................. | 19 | 3 | 18 | 0.06 | 1 | 1 | 0 | 0 |
| ..........................................................................................................................CTACCTGTGTCAGTCTGGT................ | 19 | 3 | 18 | 0.06 | 1 | 0 | 0 | 1 |
| TTTCGACTAAGTCTTGCG........................................................................................................................................... | 18 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 |
Generated: 04/23/2015 at 03:00 PM