ID:

dsi_15185

 Coordinate:

2l:10661538-10661610 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

five_prime_UTR [2l_10661488_10661604_-]; exon [2l_10661488_10661604_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------#####################################################################################################################
GCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATTTTTATTGAAATTTTAACCCAAAATATCTCCAAAACCACCCCTTTCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGC
**************************************************..(((..(((.(((.......(((((((..((((....))))...)))))))......))))))..)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 O001
Testis
 M023
head
 O002
Head
 SRR902009
testis
...................................................................................................................................................TCATACAAACGAGGGACTAACGGAGC 26 0 4 8.00 32 0 10 9 0 5 2 3 1 2 0 0 0 0 0
..................................................................................................................................................GTCATACAAACGAGGGACT........ 19 0 4 5.25 21 12 0 0 7 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGACTAACGG... 27 0 4 5.25 21 0 2 5 0 6 1 1 0 6 0 0 0 0 0
..................................................................................................................................................GTCATACAAACGAGGGAC......... 18 0 4 3.50 14 11 0 0 3 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CATACAAACGAGGGACTAACGGAGC 25 0 4 3.00 12 0 6 1 1 1 0 3 0 0 0 0 0 0 0
..................................................................................................................................................GTCATACAAACGAGGGACTAACGGAGC 27 0 4 3.00 12 2 1 2 3 1 0 3 0 0 0 0 0 0 0
......................................................................................................................................................TACAAACGAGGGACTAACGGAGC 23 0 4 2.75 11 1 0 4 0 0 0 5 0 0 1 0 0 0 0
.....................................................................................................................................................ATACAAACGAGGGACTAACGGAGC 24 0 4 2.25 9 0 3 2 1 0 1 2 0 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGACTAACGGA.. 28 0 4 2.00 8 0 3 2 0 0 2 0 0 1 0 0 0 0 0
..........................................CGTTTCCGGTGAGTAGTG................................................................................................................. 18 0 2 2.00 4 0 0 0 0 0 0 0 0 0 0 2 0 2 0
................................................................................................................................................GTGTCATACAAACGAGGGAC......... 20 0 4 2.00 8 5 0 0 2 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGACTAACGGAGC 30 0 4 1.75 7 0 2 5 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GTCATACAAACGAGGGACC........ 19 1 4 1.50 6 5 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AACGAGGGACTAACGGAGC 19 0 4 1.50 6 2 0 0 2 0 1 0 0 0 1 0 0 0 0
............................................................................................................................................ATTTGTGTCATACAAACGAGGGACT........ 25 0 4 1.50 6 3 1 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TCATACAAACGAGGGACTAACGGAG. 25 0 4 1.50 6 0 0 3 0 1 1 1 0 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGACTAAC..... 25 0 4 1.25 5 2 2 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................GTGTCATACAAACGAGGGACT........ 21 0 4 1.25 5 3 0 0 0 0 1 0 0 0 1 0 0 0 0
...................................................................................................................TCTTTCAGCGAGGAGTCCATCCAGA................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TATCTCCAAAACCACCCCTTTCAGCGA............................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................CCCCGTTTCCGGTGAGTAGTGTGTTCCG.......................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GTCATACAAACGAGGGACTAACGGA.. 25 0 4 1.00 4 0 0 0 0 0 3 0 0 0 1 0 0 0 0
......................................................................................................................................TCCAGAATTTGTGTCATACAAACGAGG............ 27 0 4 1.00 4 0 1 0 0 2 0 0 1 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGACT........ 22 0 4 1.00 4 1 0 0 3 0 0 0 0 0 0 0 0 0 0
.......................................CCCCGTTTCCGGTGAGTA.................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................CCCGTTTCCGGTGAGTAGTGTGTTCCG.......................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................GTGTCATACAAACGAGGGACTAAC..... 24 0 4 1.00 4 3 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................TTTCCCTTCTTTTCTTTTCCCCGT................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................TTTGTGTCATACAAACGAGGGACT........ 24 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGTCATACAAACGAGGGACTAACGGAGC 28 0 4 0.75 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGACTAACGGAG. 29 0 4 0.75 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TACAAACGAGGGACTAACGGA.. 21 0 4 0.75 3 0 0 0 1 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................ATTTGTGTCATACAAACGAGGGA.......... 23 0 4 0.75 3 0 2 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGAC......... 21 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TTTCTTTTCCCCGTTTCCG........................................................................................................................... 19 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TTGTGTCATACAAACGAGGGA.......... 21 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGACTAACG.... 26 0 4 0.50 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0
........................CCCTTCTGTTCCTTTCCCAGTT............................................................................................................................... 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AAACGAGGGACTAACGGAGC 20 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTCCATCCAGAATTTGTGTC........................ 20 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TTCTTTTCCCCGTTTCCG........................................................................................................................... 18 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................CAGAATTTGTGTCATACAAACGAGGGA.......... 27 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTGTGTCATACAAACGAGGGACTAACGGAG. 30 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................CTTTTCTTTTCCCCG................................................................................................................................. 15 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATAAAAACGAGGGACTAACGGAG. 29 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGAGTCCATCCAGAATTTGTGTC........................ 23 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................CATCCAGAATTTGTGTCATAC.................... 21 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................TTGTGTCATACAAACGAGGGACTAAC..... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................ATTTGTGTCATACAAACGAGGGACC........ 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CATAATTTGTGTCATACAAACGAGGGA.......... 27 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AATTTGTGTCATACAAACGAGGGA.......... 24 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................GAATTTGTGTCATACAAACGAGGGA.......... 25 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................GTGTCATACAAACGAGGGACTAACG.... 25 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTTGTGTCATACAAACGAGGGAC......... 23 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CGTGTCATACAAACGAGGGACTAACGGA.. 28 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TGGGTCATACAAACGAGGGACTAACGG... 27 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGTCATACAAACGAGGGAC......... 19 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................ATACAAACGAGGGACTAACGGG.. 22 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................TACAAACGAGGGACTAAC..... 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................TCCAGAATTTGTGTCATACAAACGAGGGA.......... 29 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................GTTTGTGTCATACAAACGAGGGACT........ 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CAGAATTTGTGTCATACAAACGAGGGACT........ 29 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTGTGTCATACAAACGAGG............ 19 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................GTGTCATACAAACGAGGGACTAACGG... 26 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................ATACAAACGAGGGACTAGC..... 19 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGG............ 18 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GTCATACAAACGAGGGACTAACGGAG. 26 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................TCATACAAACGAGGGACT........ 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................ATTTGTGTCATACAAACGAGGGAC......... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTTGTGTCATACAAACGAGGGA.......... 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CCAGAATTTGTGTCATACAAACGAGT............ 26 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................TTTGTGTCATACAAACGAGGGACTAACGG... 29 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................GTCATACAAACGAGGGACTAACGG... 24 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGA.......... 20 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTCCATCCAGAATTTGTGTCATACA................... 25 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................TTGTGTCATACAAACGAGGGACTAACG.... 27 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................CATCCAGAATTTGTGTCATACA................... 22 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................TTGTGTCATACAAACGAGGGACTAACGGA.. 29 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GTCGTACAAACGAGGGACTAACGG... 24 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................GTGTCATACAAACGAGGGACTAACGGAGC 29 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................ATCCAGAATTTGTGTCATACAAACGA.............. 26 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................ACGAGGGACTAACGGAGC 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TTTGTCATACAAACGAGGGACTAACGGAG. 29 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GAGTCCATCCAGAATTTGT........................... 19 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................TTTGTGTCATACAAACGAGGGACTAACG.... 28 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................TCATACAAACGAGGGACTAACGGA.. 24 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................TCCAGAATTTGTGTCATACAAACGA.............. 25 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................TGTCATACAAACGAGGGA.......... 18 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TCATACAAACGAGGGACTAACGTAGC 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CCATCCAGAATTTGTGTCATACAAACGA.............. 28 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................GAGTCCATCCAGAATTTGTGT......................... 21 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................AACGAGGGACTAACG.... 15 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................CAGAATTTGTGTCATACAAAC................ 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTCCATCCAGAATTTGTGTCATAC.................... 24 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................AATTTGTGTCATACAAACGAGGGAC......... 25 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGACTAACGGAA. 29 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGAGTAAGGG... 27 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTGTCACAGAAACGAGGAACT........ 22 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................ATACAAACGAGGGACTAACGGA.. 22 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTGTCATACAAACGAGGGACTA....... 23 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................TTTGTGTCATACAAACGAGGGACTAA...... 26 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................TACAAACGAGGGACTAACG.... 19 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................CATACAAACGAGGGACTAAC..... 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................ACTTGTGTCATACAA.................. 15 1 18 0.22 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TATTGAAATTCTAACCTA............................................................................. 18 2 13 0.15 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................CGGGGAGTAGTGTGGTC............................................................................................................ 17 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................TCTTTTCTTTTGCCCG................................................................................................................................. 16 1 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................TGTATTGAAATTCTAACC............................................................................... 18 2 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................TTTTTTTTTTCCCGTTTCCG........................................................................................................................... 20 2 17 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

CGGAGTGTGTCGGTGTAATTTAAAGGGAAGAAAAGAAAAGGGGCAAAGGCCACTCATCACACAAGGCGCAATATAAAAATAACTTTAAAATTGGGTTTTATAGAGGTTTTGGTGGGGAAAGTCGCTCCTCAGGTAGGTCTTAAACACAGTATGTTTGCTCCCTGATTGCCTCG
**************************************************..(((..(((.(((.......(((((((..((((....))))...)))))))......))))))..)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
...............................................................................................................................CTCAGGTAGGTCTTAAACACAGTATGT................... 27 0 4 1.25 5 5 0 0 0 0 0 0 0
....................TAAAGGGAAGAAAAGAAAAGG.................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................................CAGGTAGGTCTTAAACACAGTATGT................... 25 0 4 0.50 2 0 1 0 0 1 0 0 0
..................................................................................................................................AGGTAGGTCTTAAACACAGTATGTTTGCT.............. 29 0 4 0.25 1 0 1 0 0 0 0 0 0
...........................................................................................................................GCTCCTCAGGTAGGTCTTAAA............................. 21 0 4 0.25 1 0 0 0 1 0 0 0 0
.................................................................................................................................CAGGTAGGTCTTAAACACAGT....................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0
...............................................................................................................................CTCAGGTAGGTCTTAAACACA......................... 21 0 4 0.25 1 0 0 0 1 0 0 0 0
...........................................................................................................................................TTAAACACAGTATGTTTGCTCCCTGAT....... 27 0 4 0.25 1 0 1 0 0 0 0 0 0
............................................................................................................................CTCCTCAGGTAGGTCTGA............................... 18 1 4 0.25 1 0 0 0 1 0 0 0 0
.................................................................................................................................CAGGTAGGTCTTAAACACAGTATGTT.................. 26 0 4 0.25 1 0 0 0 0 1 0 0 0
..........................................................................................................TTTTGCTGAGGAAAGTCGCC............................................... 20 3 4 0.25 1 0 0 0 0 0 1 0 0
............................................................................................................................................................GCTCCCTGATTTCCT.. 15 1 14 0.21 3 0 2 0 0 0 0 0 1
............................................................................................................................GTCCTCAGCTAGGGCTTAA.............................. 19 3 12 0.08 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:10661488-10661660 - dsi_15185 GCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATT-TTTATTGAAATTTTAACCCAAAATATCTCCAAAACCACCCCTTTCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGC
droSec2 scaffold_3:6405555-6405727 - GCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATT-TTTATTGAAATTTTAACCCAAAATATCTCCAAAACCACCCCTTTCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGC
dm3 chr2L:11004006-11004178 - GCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATT-TTTATTGAAATTTTAACCCAAAATATCTCTAAAACCACCCCTTGCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGC
droEre2 scaffold_4929:14442049-14442221 + GCCTCACACGGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATT-TTTATTGAAATTTTAACCCAAAATATCCTTAAAACCACCACTTGCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGC
droYak3 2L:7396302-7396474 - GCCTAACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATT-TTTATTGAAATTTTAACCCAAAATATCTATTAAACAACCACTTGCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGC
droEug1 scf7180000407253:438155-438327 - CCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGCAGTGTGTTCCGCGTTATATT-TATATTAAATTTTTAACCCAAAATACCTTTAAATTAACTATTTGCAGCGAGGAGTCCATCCAGAATTTGTCTGATTCAACCGACGGACTAACGGAAC
droBia1 scf7180000302422:2103794-2103967 + GCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATTTTTTATTAAAATTTTAACCCAACATATCTTTAAATCGAACCATTGCAGCGAGGAGTCCATCCAGAATTTGTATCATACAAACGAGGGACTAACGGAGC
droTak1 scf7180000414023:71036-71205 - GCTTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGT-GTGTG-TCCGCGTTATATT-TTTATTAAAGTTTTAACCCAAAATATAATTAAATCC-CCCATTGCAGCGAGGAGTCCATCCAGAATTTGTCTCACACAAACGACGGACTAACGGAGC
droEle1 scf7180000490644:532626-532798 + GCCTCATGCAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCATTTTATT-TTTATTGAAATTTTAACCCAAAATATCATTAAATCAACATATTGCAGCGAGGAGTCCATCCAGAATTTGTCTGATTCAAACGACGGACTAACGGAGC
droRho1 scf7180000780261:9151-9323 - GCCTGATGCAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTTTATT-TTTATTGAAATTTTAACCCAAAATATCTTTTAATCAACGTATTGCAGCGAGGAGTCCATCCAGAATTTGTCTGATACAAACGAGGGACTAACGGAGC
droFic1 scf7180000454111:466309-466477 - GCCTGAGGCGGCCACACTAAATTTCCCTTCTTTTCTTTTC-CCGTTTCCGGTGAG---TGCGTTCCGCGTTTTATT-TTTGTTAAAAAATTAACCCAAAATATCTTCAATTCGACTCTTTGCAGCGAGGAGTCCATCCAGAATTTGTCTCATACAAACGACGGACTAACGGAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATT-TTTATTGAAATTTTAACCCAAAATATCTCCAAAACCACCCCTTTCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................TCATACAAACGAGGGACTAACGGAGC2648.0032000200910521030000
...................................................................................................................................................GTCATACAAACGAGGGACT........1945.2521071210000100000000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAACGG...2745.252100010052660010000
...................................................................................................................................................GTCATACAAACGAGGGAC.........1843.5014031100000000000000
.....................................................................................................................................................CATACAAACGAGGGACTAACGGAGC2543.001201000016100030000
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGAGC2743.001203200021100030000
.......................................................................................................................................................TACAAACGAGGGACTAACGGAGC2342.751100100040000150000
......................................................................................................................................................ATACAAACGAGGGACTAACGGAGC2442.25901010023000020000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAACGGA..2842.00800020023010000000
..........................................CGTTTCCGGTGAGTAGTG..................................................................................................................1822.00400002200000000000
.................................................................................................................................................GTGTCATACAAACGAGGGAC.........2042.00812500000000000000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAACGGAGC3041.75700000052000000000
...................................................................................................................................................GTCATACAAACGAGGGACC........1941.50601500000000000000
...........................................................................................................................................................AACGAGGGACTAACGGAGC1941.50602210000000100000
.............................................................................................................................................ATTTGTGTCATACAAACGAGGGACT........2541.50602300001000000000
....................................................................................................................................................TCATACAAACGAGGGACTAACGGAG.2541.50600010030100010000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAAC.....2541.25501200002000000000
.................................................................................................................................................GTGTCATACAAACGAGGGACT........2141.25500310000000100000
....................................................................................................TATCTCCAAAACCACCCCTTTCAGCGA...............................................2711.00100000001000000000
.......................................CCCCGTTTCCGGTGAGTAGTGTGTTCCG...........................................................................................................2811.00100100000000000000
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGA..2541.00400030000000100000
.......................................................................................................................................TCCAGAATTTGTGTCATACAAACGAGG............2741.00400000001201000000
................................................................................................................................................TGTGTCATACAAACGAGGGACT........2241.00403100000000000000
.......................................CCCCGTTTCCGGTGAGTA.....................................................................................................................1811.00100001000000000000
........................................CCCGTTTCCGGTGAGTAGTGTGTTCCG...........................................................................................................2711.00110000000000000000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAAC.....2441.00400310000000000000
.....................TTTCCCTTCTTTTCTTTTCCCCGT.................................................................................................................................2411.00100000000001000000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGACT........2440.75300300000000000000
..................................................................................................................................................TGTCATACAAACGAGGGACTAACGGAGC2840.75300000002100000000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAACGGAG.2940.75300000001200000000
.......................................................................................................................................................TACAAACGAGGGACTAACGGA..2140.75301020000000000000
.............................................................................................................................................ATTTGTGTCATACAAACGAGGGA..........2340.75300010002000000000
................................................................................................................................................TGTGTCATACAAACGAGGGAC.........2140.75300300000000000000
...............................TTTCTTTTCCCCGTTTCCG............................................................................................................................1920.50100000000001000000
...............................................................................................................................................TTGTGTCATACAAACGAGGGA..........2140.50200000002000000000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAACG....2640.50200000000101000000
..........................................................................................................................................................AAACGAGGGACTAACGGAGC2040.50200200000000000000
..................................................................................................................................GTCCATCCAGAATTTGTGTC........................2040.50200200000000000000
................................TTCTTTTCCCCGTTTCCG............................................................................................................................1820.50100000000001000000
.........................................................................................................................................CAGAATTTGTGTCATACAAACGAGGGA..........2740.50200000002000000000
...............................................................................................................................................TTGTGTCATACAAACGAGGGACTAACGGAG.3040.50200000020000000000
.............................CTTTTCTTTTCCCCG..................................................................................................................................1530.33100000000001000000
...............................................................................................................................GGAGTCCATCCAGAATTTGTGTC........................2340.25100000000000100000
.....................................................................................................................................CATCCAGAATTTGTGTCATAC....................2140.25100010000000000000
...............................................................................................................................................TTGTGTCATACAAACGAGGGACTAAC.....2640.25100100000000000000
.............................................................................................................................................ATTTGTGTCATACAAACGAGGGACC........2540.25101000000000000000
............................................................................................................................................AATTTGTGTCATACAAACGAGGGA..........2440.25100010000000000000
...........................................................................................................................................GAATTTGTGTCATACAAACGAGGGA..........2540.25100000010000000000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAACG....2540.25100000010000000000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGAC.........2340.25101000000000000000
..................................................................................................................................................TGTCATACAAACGAGGGAC.........1940.25100100000000000000
......................................................................................................................................................ATACAAACGAGGGACTAACGGG..2240.25100000000000001000
.......................................................................................................................................................TACAAACGAGGGACTAAC.....1840.25100100000000000000
.......................................................................................................................................TCCAGAATTTGTGTCATACAAACGAGGGA..........2940.25100000010000000000
.........................................................................................................................................CAGAATTTGTGTCATACAAACGAGGGACT........2940.25100000010000000000
...............................................................................................................................................TTGTGTCATACAAACGAGG............1940.25100000000100000000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAACGG...2640.25100010000000000000
................................................................................................................................................TGTGTCATACAAACGAGG............1840.25100000010000000000
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGAG.2640.25100000000000001000
....................................................................................................................................................TCATACAAACGAGGGACT........1840.25100100000000000000
.............................................................................................................................................ATTTGTGTCATACAAACGAGGGAC.........2440.25100100000000000000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGA..........2240.25100000001000000000
........................................................................................................................................CCAGAATTTGTGTCATACAAACGAGT............2640.25100000000001000000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGACTAACGG...2940.25100000000000001000
...................................................................................................................................................GTCATACAAACGAGGGACTAACGG...2440.25100010000000000000
................................................................................................................................................TGTGTCATACAAACGAGGGA..........2040.25100000000100000000
..................................................................................................................................GTCCATCCAGAATTTGTGTCATACA...................2540.25100000000000100000
...............................................................................................................................................TTGTGTCATACAAACGAGGGACTAACG....2740.25100010000000000000
.....................................................................................................................................CATCCAGAATTTGTGTCATACA...................2240.25100010000000000000
...............................................................................................................................................TTGTGTCATACAAACGAGGGACTAACGGA..2940.25100000010000000000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAACGGAGC2940.25110000000000000000
......................................................................................................................................ATCCAGAATTTGTGTCATACAAACGA..............2640.25100000000100000000
............................................................................................................................................................ACGAGGGACTAACGGAGC1840.25100100000000000000
................................................................................................................................GAGTCCATCCAGAATTTGT...........................1940.25100000000000100000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGACTAACG....2840.25100010000000000000
....................................................................................................................................................TCATACAAACGAGGGACTAACGGA..2440.25100000001000000000
.......................................................................................................................................TCCAGAATTTGTGTCATACAAACGA..............2540.25100000000010000000
..................................................................................................................................................TGTCATACAAACGAGGGA..........1840.25100000010000000000
....................................................................................................................................CCATCCAGAATTTGTGTCATACAAACGA..............2840.25100010000000000000
................................................................................................................................GAGTCCATCCAGAATTTGTGT.........................2140.25100000000000100000
...........................................................................................................................................................AACGAGGGACTAACG....1540.25100000000001000000
.........................................................................................................................................CAGAATTTGTGTCATACAAAC................2140.25100100000000000000
..................................................................................................................................GTCCATCCAGAATTTGTGTCATAC....................2440.25100000000000100000
............................................................................................................................................AATTTGTGTCATACAAACGAGGGAC.........2540.25110000000000000000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAACGGAA.2940.25100000000100000000
......................................................................................................................................................ATACAAACGAGGGACTAACGGA..2240.25100000010000000000
................................................................................................................................................TGTGTCATACAAACGAGGGACTA.......2340.25100000000000010000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGACTAA......2640.25100000000000001000
.......................................................................................................................................................TACAAACGAGGGACTAACG....1940.25100000000001000000
.....................................................................................................................................................CATACAAACGAGGGACTAAC.....2040.25100100000000000000
droSec2
GCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATT-TTTATTGAAATTTTAACCCAAAATATCTCCAAAACCACCCCTTTCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................CGTTTCCGGTGAGTAGTG..................................................................................................................1814.0040004
................................................................................................................................................TGTGTCATACAAACGAGGGA..........2032.6780170
...........................................................................................................................................................AACGAGGGACTAACGGAGC1932.0061050
.............................................................................................................................GAGGAGTCCATCCAGAATTTGT...........................2222.0040220
..........................................CGTTTCCGGTGAGTAGTGTGTTCCGC..........................................................................................................2612.0022000
.................................................................................................................................................GTGTCATACAAACGAGGGA..........1932.0060150
..................................................................................................................................GTCCATCCAGAATTTGTGTC........................2022.0040130
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGAGC2731.6750230
.................................................................................................................................................GTGTCATACAAACGAGGGACT........2131.6750050
...............................................................................................................................................TTGTGTCATACAAACGAGGGA..........2131.6750050
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGA..2531.6750050
......................................................................................................................................ATCCAGAATTTGTGTCATACA...................2121.5030030
.................................................................................................................................AGTCCATCCAGAATTTGT...........................1821.5030030
.................................................................................................................................AGTCCATCCAGAATTTGTGT.........................2021.5030030
...................................................................................................................................................GTCATACAAACGAGGGACTAACG....2331.3340040
................................................................................................................................................TGTGTCATACAAACGAGGG...........1931.0030030
..........................................CGTTTCCGGTGAGTAGTGTGTTCCGCG.........................................................................................................2711.0010100
............................................TTTCCGGTGAGTAGTGTGTTCCG...........................................................................................................2311.0010001
.............................................................................................................AACCACCCCTTTCAGCGAGGAGTCC........................................2511.0010010
.............................CTTTTCTTTTCCCCGTTTCCG............................................................................................................................2111.0010010
...........................................GTTTCCGGTGAGTAGTGTGTTCCGC..........................................................................................................2511.0011000
...............................................................................................................................................TTGTGTCATACAAACGAGG............1931.0030030
.............................CTTTTCTTTTCCCCGTTTCC.............................................................................................................................2011.0010010
...............................................................................................................CCACCCCTTTCAGCGAGGAGTCC........................................2311.0010010
.....................................................................................................................CTTTCAGCGAGGAGTCCATCCAGAAT...............................2611.0010010
................................TTCTTTTCCCCGTTTCCGGTGAGTAGTG..................................................................................................................2811.0010001
......................................................................................................................................ATCCAGAATTTGTGTCATACAAACGAG.............2721.0020020
.................................................GGTGAGTAGTGTGTTCCG...........................................................................................................1811.0010001
..................................................................................................................................GTCCATCCAGAATTTGTGT.........................1921.0020020
...........................................GTTTCCGGTGAGTAGTGTGTTCC............................................................................................................2311.0010010
..................................................................................................................................GTCCATCCAGAATTTGTGTCATACA...................2521.0020020
.......................................CCCCGTTTCCGGTGAGTAGTG..................................................................................................................2111.0010100
........................................CCCGTTTCCGGTGAGTAGTG..................................................................................................................2011.0010100
...........................................................................................................AAAACCACCCCTTTCAGCGAGGAGT..........................................2511.0010010
.............................................................................................................................................ATTTGTGTCATACAAACGAGGGAC.........2430.6720110
.................................................................................................................................................GTGTCATACAAACGAGGGACTAACGGA..2730.6721100
..........................................................................................................................................AGAATTTGTGTCATACAAACGAGGGA..........2630.6720110
.................................................................................................................................................GTGTCATACAAACGAGGGACTAACGG...2630.6721010
.....................................................................................................................................................CATACAAACGAGGGACTAACGGAGC2530.6720020
.................................................................................................................................................GTGTCATACAAACGAGGGAC.........2030.6720020
...................................................................................................................................................GTCATACAAACGAGGGACTAAC.....2230.6720020
................................................................................................................................................TGTGTCATACAAACGAGGGAC.........2130.6721010
...................................................................................................................................................GTCATACAAACGAGGGACT........1930.6720020
............................................................................................................................................................ACGAGGGACTAACGGAGC1830.6720020
..............................................................................................................................................TTTGTGTCATACAAACGAGGGA..........2230.6720020
.....................................................................................................................................CATCCAGAATTTGTGTCATAC....................2120.5010010
........................................................................................................................................CCAGAATTTGTGTCATACAAACGAGG............2620.5010010
................................................................................................................................GAGTCCATCCAGAATTTGTGT.........................2120.5010010
......................................................................................................................................ATCCAGAATTTGTGTCATAC....................2020.5010010
......................................................................................................................................ATCCAGAATTTGTGTCATACAAAC................2420.5010010
...............................TTTCTTTTCCCCGTTTCCG............................................................................................................................1920.5011000
.....................................................................................................................................CATCCAGAATTTGTGTCATACA...................2220.5010010
.........................................................................................................................................CAGAATTTGTGTCATACA...................1820.5010010
.....................................................................................................................................CATCCAGAATTTGTGTCATA.....................2020.5010010
....................................................................................................................................CCATCCAGAATTTGTGTCATACA...................2320.5010010
........................................................................................................................................CCAGAATTTGTGTCATACA...................1920.5010010
................................TTCTTTTCCCCGTTTCCG............................................................................................................................1820.5010010
............................................................................................................................CGAGGAGTCCATCCAGAATTTGTG..........................2420.5010010
................................................................................................................................GAGTCCATCCAGAATTTGT...........................1920.5010100
...............................................................................................................................................TTGTGTCATACAAACGAGGGACTAAC.....2630.3310010
................................................................................................................................................TGTGTCATACAAACGAGGGACT........2230.3310010
.........................................................................................................................................................CAAACGAGGGACTAACGGAGC2130.3310010
......................................................................................................................................................ATACAAACGAGGGACTAACGGAGC2430.3310010
..............................................................................................................................................TTTGTGTCATACAAACGAGGG...........2130.3310010
.......................................................................................................................................................TACAAACGAGGGACTAACGGAGC2330.3310010
..............................................................................................................................................TTTGTGTCATACAAACGAGGGACT........2430.3310010
...................................................................................................................................................GTCATACAAACGAGGGACTAA......2130.3310010
.....................................................................................................................................................CATACAAACGAGGGACTAACGGA..2330.3310010
..............................................................................................................................................TTTGTGTCATACAAACGAGGGAC.........2330.3310010
.......................................................................................................................................................TACAAACGAGGGACTAAC.....1830.3310010
...................................................................................................................................................GTCATACAAACGAGGGACTA.......2030.3310010
......................................................................................................................................................ATACAAACGAGGGACTAAC.....1930.3310010
..................................................................................................................................................TGTCATACAAACGAGGGA..........1830.3310010
................................................................................................................................................TGTGTCATACAAACGAGGGACTAAC.....2530.3310010
......................................................................................................................................................ATACAAACGAGGGACTAACGG...2130.3310010
...........................................................................................................................................................AACGAGGGACTAACGGAG.1830.3310010
.......................................................................................................................................................TACAAACGAGGGACTAACGGA..2130.3310001
..........................................................................................................................................................AAACGAGGGACTAACGGAGC2030.3310010
......................................................................................................................................................ATACAAACGAGGGACTAACGGAG.2330.3310010
....................................................................................................................................................TCATACAAACGAGGGACT........1830.3310010
................................................................................................................................................TGTGTCATACAAACGAGGGACTAACGG...2730.3311000
................................................................................................................................................TGTGTCATACAAACGAGG............1830.3310010
....................................................................................................................................................TCATACAAACGAGGGACTAACGGAGC2630.3310010
..............................................................................................................................................TTTGTGTCATACAAACGAG.............1930.3310010
dm3
GCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATT-TTTATTGAAATTTTAACCCAAAATATCTCTAAAACCACCCCTTGCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................CGTTTCCGGTGAGTAGTG..................................................................................................................18140.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000200000000000000000000000201000000000000000000000200020000000000000000000000000000000101000200300000220100000000000010100100101100120010200000000100000100000000102000
.............................................................................................................................GAGGAGTCCATCCAGAATTTGTGTC........................25137.003700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000
....................................................................................................................................................TCATACAAACGAGGGACTAACGGAGC26136.00360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000010000000000000000000000000000000000000000000000000000200001013300000000000000020513620000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001100000
..........................................................................................................................................................AAACGAGGGACTAACGGAGC20125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000100000000000000000000000000000000000000000000001001000000000000100000002000010000000000000200001000000000000000000000000000000000000000000000110000000001050002100000000000000011000000
...........................................................................................................................................................AACGAGGGACTAACGGAGC19125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000200000000000100000000000021000000000000000001100000000001000000000000000000000000000000000000000111000000000120000000000000000000422000000
..........................................CGTTTCCGGTGAGTAGTGTG................................................................................................................20120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000001000000000000000000000100000000000010000000010001300002020100000000120
.................................................GGTGAGTAGTGTGTTCCG...........................................................................................................18117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000002010000101000001100010000002103000
............................................................................................................................................................ACGAGGGACTAACGGAGC18117.00170000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000000000000000000000100100001000200001000001000000000310010000
.............................................................................................................................................ATTTGTGTCATACAAACGAGG............21116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000833000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GTTTCCGGTGAGTAGTGTG................................................................................................................19114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000110101000000001012000100000000000000000
.......................................................................................................................................................TACAAACGAGGGACTAACGGAGC23114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000014300000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010000000000000000000000000200000000
................................................................................................................................................TGTGTCATACAAACGAGGGACT........22113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000300000000000000000002000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100010000000000000001000000000000
.....................................................................................................ATCTCTAAAACCACCCCTTGCAGA.................................................24113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000010040010000000000000000000000000000000100100000000000000000000000000010000000000000000000010000000000000000100000
..........................................CGTTTCCGGTGAGTAGTGTGTTCCG...........................................................................................................25112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000010100011000110100000100
.......................................CCCCGTTTCCGGTGAGTAGTG..................................................................................................................21112.00120000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000012101300000000000000000
.............................................................................................................................................ATTTGTGTCATACAAACGAGGGA..........23112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000050000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGAGC27112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000060000010000000001000020000000
...............................................................................................................................................TTGTGTCATACAAACGAGGGA..........21111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000100000000000100010000000000001000110000000
.........................................................................................................................................CAGAATTTGTGTCATACAAACGAGGGAC.........28111.00110000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000010103100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................CCCGTTTCCGGTGAGTAGTG..................................................................................................................20111.00110000000000000000000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010100000010000000000001000100000000000002000
...................................................................................................................................................GTCATACAAACGAGGGACT........19110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000001000000001000000001100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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...................................................................................................................................................GTCATACAAACGAGGGACTAA......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CCAGAATTTGTGTCATACAAACGAGGGAC.........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAAC.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................AAACGAGGGACTAACGGAGG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................TTGTGTCATACAAACGAGGGACTAACGG...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTGTGTCATACAAACGAG.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAAC.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................AATTTGTGTCATACAAACGAGGGACTA.......2711.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTAGTGTGTTCCGCGTTATA....................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TTTCTTTTCCCCGTTTCCGGTGAGTAG....................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AGTCCATCCAGAATTTGTGTCATAC....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................ACCCCTTGCAGCGAGGAG...........................................1811.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TCCAGAATTTGTGTCATACAAACGAGGGAC.........3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TCCATCCAGAATTTGTGTCATACAAA.................2611.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AAAACCACCCCTTGCAGCGAGGAGTC.........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCCTCACACGGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATT-TTTATTGAAATTTTAACCCAAAATATCCTTAAAACCACCACTTGCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................AACGAGGGACTAACGGAGC19115.001511001030
.................................................................................................................................................GTGTCATACAAACGAGGGA..........19112.00124203300
..................................................GTGAGTAGTGTGTTCCGCGTTATAT...................................................................................................25110.001000000010
..................................................................................................................................GTCCATCCAGAATTTGTGT.........................19110.00100006130
......................................................................................................................................ATCCAGAATTTGTGTCATACA...................2119.0091102230
..............................................................................................................................................TTTGTGTCATACAAACGAGGGA..........2217.0070003400
......................................................................................................................................................ATACAAACGAGGGACTAACGGAGC2415.0051000220
................................................................................................................................................TGTGTCATACAAACGAGGGA..........2015.0050011120
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGAGC2714.0041200100
..................................................................................................................................GTCCATCCAGAATTTGTGTC........................2014.0040001210
...............................................................................................................................................TTGTGTCATACAAACGAGGGA..........2113.0030100200
...................................................................................................................................................GTCATACAAACGAGGGACT........1913.0031001010
..................................................................................................................................GTCCATCCAGAATTTGTGTCATACA...................2513.0031101000
.................................................................................................................................AGTCCATCCAGAATTTGTGT.........................2013.0030002100
......................................................................................................................................................ATACAAACGAGGGACTAACGG...2113.0030200100
..........................................................................................................................................................AAACGAGGGACTAACGGAGC2012.0020011000
...............................................................................................................................................TTGTGTCATACAAACGAGGGAC.........2212.0020100100
...............................................................................................................................................TTGTGTCATACAAACGAGGGACT........2312.0020200000
........................................................................................................................................CCAGAATTTGTGTCATACA...................1912.0020101000
...................................................................................................................................................GTCATACAAACGAGGGACTAACGG...2412.0021001000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGAC.........2312.0020100100
........................................................................................................................................................ACAAACGAGGGACTAACGGAGC2212.0020100010
....................................................................................................................................................TCATACAAACGAGGGACTAACGG...2312.0022000000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAACGG...2712.0020000002
.............................................................................................................................GAGGAGTCCATCCAGAATTTGT...........................2212.0020000020
.....................................................................................................ATCCTTAAAACCACCACTTGC....................................................2112.0022000000
...................................................................................................................................................GTCATACAAACGAGGGAC.........1812.0021000010
.........................................................................................................................................................CAAACGAGGGACTAACGGAGC2112.0020000110
.....................................................................................................................................................CATACAAACGAGGGACTAAC.....2012.0020100100
......................................................................................................................................ATCCAGAATTTGTGTCATACAAA.................2312.0020000020
..................................................................................................................................................TGTCATACAAACGAGGGA..........1811.0011000000
......................................................................................................................................ATCCAGAATTTGTGTCATACAAAC................2411.0010000100
................................................................................................................................................TGTGTCATACAAACGAGGGACT........2211.0010000100
.....................................................................................................................................CATCCAGAATTTGTGTCATACA...................2211.0010000010
...............................................................................................................................................TTGTGTCATACAAACGAGGGACTAAC.....2611.0010000010
..................................................GTGAGTAGTGTGTTCCGCGT........................................................................................................2011.0010100000
.........................................................................................................................................................CAAACGAGGGACTAACGGA..1911.0010001000
.....................................................................................................................................CATCCAGAATTTGTGTCATACAAAC................2511.0011000000
...................................................................................................................................................GTCATACAAACGAGGGACTAAC.....2211.0010100000
.................................................................................................................................................GTGTCATACAAACGAGGGAC.........2011.0010100000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGACTAAC.....2711.0010001000
.......................................................................................................................................TCCAGAATTTGTGTCATACA...................2011.0010000010
.......................................................................................................................................TCCAGAATTTGTGTCATACAAACGA..............2511.0010001000
...........................................................................................................................GCGAGGAGTCCATCCAGAATTTGTGTC........................2711.0010100000
.....................................................................................................................................CATCCAGAATTTGTGTCATACAAACGAG.............2811.0011000000
........................................................................................................CTTAAAACCACCACTTGCAG..................................................2011.0010100000
.....................................................................................................................................................CATACAAACGAGGGACTAACGGAGC2511.0010000100
..............................................................................................................................................TTTGTGTCATACAAACGAGGG...........2111.0010001000
..................................................................................................................................GTCCATCCAGAATTTGTGTCATACAAACG...............2911.0011000000
.......................................................................................................................................................TACAAACGAGGGACTAACGGAGC2311.0010100000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAAC.....2411.0010100000
.......................................................................................................................................................TACAAACGAGGGACTAACGGAG.2211.0010100000
..........................................................................................................................................................AAACGAGGGACTAACGGA..1811.0010100000
..........................................................................................................................................AGAATTTGTGTCATACAAACGAGGGA..........2611.0010000100
........................................................................................................................................CCAGAATTTGTGTCATACAAA.................2111.0010000010
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGA..2511.0010000100
............................................................................................................AAACCACCACTTGCAGCGAGGA............................................2211.0010001000
.................................................................................................................................................GTGTCATACAAACGAGGGACT........2111.0010000010
......................................................................................................................................ATCCAGAATTTGTGTCATACAAACGA..............2611.0010000010
......................................................................................................................................ATCCAGAATTTGTGTCATACAAACGAGG............2811.0011000000
......................................................................................................................................................ATACAAACGAGGGACTAAC.....1911.0010000010
....................................................................................................................................CCATCCAGAATTTGTGTC........................1811.0010000010
...........................................................................................................................GCGAGGAGTCCATCCAGA.................................1811.0010000010
................................................................................................................................................TGTGTCATACAAACGAGGGACTAAC.....2511.0010100000
................................................................................................................................................TGTGTCATACAAACGAGGGAC.........2111.0010100000
................................................................................................................................GAGTCCATCCAGAATTTGT...........................1911.0010000010
...............................................................................................................................................TTGTGTCATACAAACGAGG............1911.0010001000
..........................................CGTTTCCGGTGAGTAGTGTGTTCCGCA.........................................................................................................2711.0010000010
....................................................................................................................ACTTGCAGCGAGGAGTCCATCCAGAAT...............................2711.0010000100
........................................................................................................................................CCAGAATTTGTGTCATACAAAC................2211.0010001000
..............................................................................................................................AGGAGTCCATCCAGAATTTGTGTCA.......................2511.0010001000
...........................................................................................................................GCGAGGAGTCCATCCAGAATTTGT...........................2411.0010000100
..................................................................................................................................................TGTCATACAAACGAGGGACT........2011.0010000010
...........................................................................................................................GCGAGGAGTCCATCCAGAATTTGTGT.........................2611.0010000100
........................................................................................................................................CCAGAATTTGTGTCATACAAACGAGG............2611.0010000010
.............................................................................................................................................ATTTGTGTCATACAAACGAGGGA..........2311.0010000100
.......................................................................................................................................................TACAAACGAGGGACTAACGGA..2111.0010000010
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGAG.2611.0011000000
.....................................................................................................................................CATCCAGAATTTGTGTCATACAAACG...............2611.0011000000
..................................................................................................................................GTCCATCCAGAATTTGTGTCATA.....................2311.0010001000
.....................................................................................................................................................CATACAAACGAGGGACTAACGGA..2311.0010001000
..........................CTTCTTTTCTTTTCCCCGTTTCC.............................................................................................................................2311.0010100000
.................................................GGTGAGTAGTGTGTTCCGC..........................................................................................................1911.0010001000
droYak3
GCCTAACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATT-TTTATTGAAATTTTAACCCAAAATATCTATTAAACAACCACTTGCAGCGAGGAGTCCATCCAGAATTTGTGTCATACAAACGAGGGACTAACGGAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................AACGAGGGACTAACGGAGC19128.0028171600040000
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGAGC27128.0028071510050000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAAC.....25115.0015000000000015
...............................................................................................................................................TTGTGTCATACAAACGAGGGA..........21115.0015013100100000
..........................................................................................................................................................AAACGAGGGACTAACGGAGC20114.001422600040000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGACTAAC.....27112.0012010000000011
.....................................................................................................................................................CATACAAACGAGGGACTAACGGAGC2518.00801320020000
..........................................................................................................................................AGAATTTGTGTCATACAAACGAGGGA..........2618.00800000000008
...................................................................................................................................TCCATCCAGAATTTGTGTCATACAAAC................2718.00803500000000
..........................................................................................................................................AGAATTTGTGTCATACAAACGAGGG...........2518.00800000000008
.................................................................................................................................................GTGTCATACAAACGAGGGA..........1917.00701100050000
...................................................................................................................................................GTCATACAAACGAGGGACTAACGG...2417.00705200000000
..................................................................................................................................GTCCATCCAGAATTTGTGTC........................2015.00501110020000
...................................................................................................................................................GTCATACAAACGAGGGAC.........1815.00550000000000
......................................................................................................................................................ATACAAACGAGGGACTAACGGAGC2415.00501300010000
..................................................................................................................................GTCCATCCAGAATTTGTGT.........................1914.00400020020000
.......................................................................................................................................................TACAAACGAGGGACTAACGGAGC2314.00410100020000
...............................................................................................................................................TTGTGTCATACAAACGAGG............1914.00402110000000
............................................................................................................................................................ACGAGGGACTAACGGAGC1813.00300210000000
......................................................................................................................................ATCCAGAATTTGTGTCATAC....................2013.00301200000000
..................................................................................................................................GTCCATCCAGAATTTGTGTCATACA...................2513.00301010010000
..................................................................................................................................GTCCATCCAGAATTTGTGTCATAC....................2413.00300210000000
........................................................................................................................................CCAGAATTTGTGTCATACA...................1913.00303000000000
.................................................................................................................................................GTGTCATACAAACGAGGGACT........2113.00301000020000
....................................................................................................................................................TCATACAAACGAGGGACTAACGGAGC2613.00302100000000
..................................................................................................................................................TGTCATACAAACGAGGGACTAACGGAGC2813.00301100010000
............................................................................................................................................AATTTGTGTCATACAAACGAGGGA..........2413.00300000030000
................................................................................................................................................TGTGTCATACAAACGAGGGA..........2013.00301000020000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGA..........2212.00200101000000
.......................................................................................................................................................TACAAACGAGGGACTAACGGA..2112.00200100010000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAACGG...2612.00201000010000
...............................................................................................................................................TTGTGTCATACAAACGAGGGAC.........2212.00201010000000
.....................................................................................................................................................CATACAAACGAGGGACTAACGGAG.2412.00200100010000
......................................................................................................................................ATCCAGAATTTGTGTCATACA...................2112.00200010010000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAAC.....2412.00201000010000
......................................................................................................................................................ATACAAACGAGGGACTAACGG...2112.00201000010000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGACT........2412.00202000000000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAACGGA..2712.00202000000000
.........................................................................................................................................................CAAACGAGGGACTAACGGAGC2112.00200000020000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGACTAACGGA..3012.00200000000002
...................................................................................................................................................GTCATACAAACGAGGGACTAACGGA..2512.00200110000000
...........................................................................................................................................GAATTTGTGTCATACAAACGAGGGACT........2712.00200000000002
.....................................................................................................................................................CATACAAACGAGGGACTAACGG...2212.00200100010000
...................................................................................................................................................GTCATACAAACGAGGGACT........1912.00200200000000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGAC.........2312.00210100000000
......................................................................................................................................................ATACAAACGAGGGACTAACGGA..2212.00200000020000
...............................................................................................................................................TTGTGTCATACAAACGAGGGACT........2312.00200200000000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAACG....2511.00101000000000
.........................................................................................................................................................CAAACGAGGGACTAACGG...1811.00100001000000
...................................................................................................................................TCCATCCAGAATTTGTGTCATACAAACG...............2811.00101000000000
...................................................................................................................................................GTCATACAAACGAGGGACTAACG....2311.00100000010000
..................................................................................................................................................TGTCATACAAACGAGGGACTAACGGA..2611.00101000000000
..............................................................................................................................................TTTGTGTCATACAAACGAGG............2011.00101000000000
..............................................TCCGGTGAGTAGTGTGTT..............................................................................................................1811.00100100000000
................................................................................................................................................TGTGTCATACAAACGAGGG...........1911.00100010000000
...............................TTTCTTTTCCCCGTTTCCG............................................................................................................................1911.00101000000000
..............................................................................................................................................TTTGTGTCATACAAACGAGGGACC........2411.00100100000000
................................................................................................................................................TGTGTCATACAAACGAGGGACTAACGG...2711.00100000010000
....................................................................................................................................................TCATACAAACGAGGGACTAACGG...2311.00101000000000
........................................................................................................................................................ACAAACGAGGGACTAACGG...1911.00100100000000
.......................................CCCCGTTTCCGGTGAGTAGTGTG................................................................................................................2311.00100010000000
........................................................................................................................................CCAGAATTTGTGTCATAC....................1811.00100100000000
......................................................................................................................................ATCCAGAATTTGTGTCATACAAAC................2411.00101000000000
.............................................................................................................................GAGGAGTCCATCCAGAATT..............................1911.00101000000000
................................................................................................................................................TGTGTCATACAAACGAGGGAC.........2111.00100000010000
..................................................................................................................................GTCCATCCAGAATTTGTGTCATA.....................2311.00100000010000
.................................................................................................................................................GTGTCATACAAACGAGGG...........1811.00100010000000
.........................................................................................................................................CAGAATTTGTGTCATACAAACGAGGGACT........2911.00100000010000
.........................................................................................................................................CAGAATTTGTGTCATACA...................1811.00101000000000
.....................................................................................................................................................CATACAAACGAGGGACTAAC.....2011.00100000010000
........................................................................................................................................CCAGAATTTGTGTCATACAAACGAG.............2511.00101000000000
...................................................................................................................................................GTCATACAAACGAGGGACTAA......2111.00100100000000
...............................................................................................................................................TTGTGTCATACAAACGAGGGACTAAC.....2611.00101000000000
...............................................................................................................................................TTGTGTCATACAAACGAGGGACTA.......2411.00100100000000
...................................................................................................................................TCCATCCAGAATTTGTGTCATACA...................2411.00101000000000
...........................................................................................................................GCGAGGAGTCCATCCAGAAT...............................2011.00100000010000
.........................................................................................................................................CAGAATTTGTGTCATACAAAC................2111.00101000000000
................................................................................................................AACCACTTGCAGCGAGGAGTC.........................................2111.00100100000000
...................................................................................................................................TCCATCCAGAATTTGTGTCATACAAA.................2611.00101000000000
.............................................................................................................................GAGGAGTCCATCCAGAATTTGT...........................2211.00100000010000
...........................................................................................................................GCGAGGAGTCCATCCAGAA................................1911.00100100000000
.......................................................................................................CTATTAAACAACCACTTGCAGCGAGGA............................................2711.00100100000000
............................................................................................................................CGAGGAGTCCATCCAGAATTTGT...........................2311.00101000000000
.....................................................................................................................................CATCCAGAATTTGTGTCATACA...................2211.00101000000000
.................................................................................................................................AGTCCATCCAGAATTTGTGTC........................2111.00100000010000
........................................................................................................................................................ACAAACGAGGGACTAACGGAGC2211.00100100000000
.................................................................................................................................AGTCCATCCAGAATTTGTGTCATA.....................2411.00100000010000
...........................................................................................................................GCGAGGAGTCCATCCAGAATTTGTGT.........................2611.00100000010000
........................................................................................................................................................ACAAACGAGGGACTAACGGA..2011.00100000010000
.....................................................................................................................................................CATACAAACGAGGGACTAACGGA..2311.00100010000000
...........................................................................................................................GCGAGGAGTCCATCCAGAATTTGT...........................2411.00100100000000
.................................................................................................................................................GTGTCATACAAACGAGGGACTAACGGAGC2911.00100000010000
.................................................................................................................................AGTCCATCCAGAATTTGTGT.........................2011.00100000010000
............................................................................................................AAACAACCACTTGCAGCGAGGAGT..........................................2411.00100000010000
........................................................................................................................................CCAGAATTTGTGTCATACAAACGAGGGA..........2811.00100000010000
.............................................................................................................................................ATTTGTGTCATACAAACGAGGGAC.........2411.00100100000000
...........................................................................................................................................................AACGAGGGACTAACGGAG.1811.00100010000000
.............................................................................................................................GAGGAGTCCATCCAGAATTTGTGTC........................2511.00100000010000
......................................................................................................................................................ATACAAACGAGGGACTAAC.....1911.00100100000000
......................................................................................................................................ATCCAGAATTTGTGTCATACAAA.................2311.00101000000000
..............................TTTTCTTTTCCCCGTTTCCGGTGAG.......................................................................................................................2511.00101000000000
.........................................................................................................................................CAGAATTTGTGTCATACAAACGAGG............2511.00100000010000
...........................................................................T-TTTATTGAAATTTTAACCCAAAATATC......................................................................2811.00101000000000
.............................................................................................................................................ATTTGTGTCATACAAACGAGGGA..........2311.00100010000000
.........................................................................ATT-TTTATTGAAATTTTAACCCAA............................................................................2411.00100100000000
................................TTCTTTTCCCCGTTTCCGC...........................................................................................................................1920.50101000000000
..................................CTTTTCCCCGTTTCCGCG..........................................................................................................................18200.05101000000000
droEug1
CCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGCAGTGTGTTCCGCGTTATATT-TATATTAAATTTTTAACCCAAAATACCTTTAAATTAACTATTTGCAGCGAGGAGTCCATCCAGAATTTGTCTGATTCAACCGACGGACTAACGGAACSizeHit CountTotal NormTotal
No Reads
droBia1
GCCTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTATATTTTTTATTAAAATTTTAACCCAACATATCTTTAAATCGAACCATTGCAGCGAGGAGTCCATCCAGAATTTGTATCATACAAACGAGGGACTAACGGAGCSizeHit CountTotal NormTotal
No Reads
droTak1
GCTTCACACAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGT-GTGTG-TCCGCGTTATATT-TTTATTAAAGTTTTAACCCAAAATATAATTAAATCC-CCCATTGCAGCGAGGAGTCCATCCAGAATTTGTCTCACACAAACGACGGACTAACGGAGCSizeHit CountTotal NormTotal
No Reads
droEle1
GCCTCATGCAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCATTTTATT-TTTATTGAAATTTTAACCCAAAATATCATTAAATCAACATATTGCAGCGAGGAGTCCATCCAGAATTTGTCTGATTCAAACGACGGACTAACGGAGCSizeHit CountTotal NormTotal
No Reads
droRho1
GCCTGATGCAGCCACATTAAATTTCCCTTCTTTTCTTTTCCCCGTTTCCGGTGAGTAGTGTGTTCCGCGTTTTATT-TTTATTGAAATTTTAACCCAAAATATCTTTTAATCAACGTATTGCAGCGAGGAGTCCATCCAGAATTTGTCTGATACAAACGAGGGACTAACGGAGCSizeHit CountTotal NormTotal
No Reads
droFic1
GCCTGAGGCGGCCACACTAAATTTCCCTTCTTTTCTTTTC-CCGTTTCCGGTGAG---TGCGTTCCGCGTTTTATT-TTTGTTAAAAAATTAACCCAAAATATCTTCAATTCGACTCTTTGCAGCGAGGAGTCCATCCAGAATTTGTCTCATACAAACGACGGACTAACGGAGTSizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 09:07 PM