ID:

dsi_15178

 Coordinate:

3l:2985493-2985642 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.4 -37.1 -37.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ACTCTTTGAAATGCGAAGTTTTTCGATCGGATAAATTTTGAATAGAAAAGGTGAACATCCGGGGCGGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAATCCGATTGGCCACGCCTACTGCCACGGGAAAATATGAAAAGCGAGTGAAAATCACAACAAACGCCAGGTGTAACTGGCAAACAAAGAGCAGAATGTTTCGAAAGGGCGGTGCAGTGCAGTGATACATACAAAAACAACGCCAACT
**************************************************.......((((.(((((.((((.......))))(((((((.(((.((.......)).)))..)).)))))...))))).))))................((((...)))).......(((((......))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
.............CGAAGTTTTTCGATCGGA........................................................................................................................................................................................................................... 18 0 1 4.00 4 3 0 0 0 0 0 0 0 1 0 0
...............AAGTTTTTCGATCGGATAAAT...................................................................................................................................................................................................................... 21 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
........................GATCGGATAAATTTTGAATAGAAA.......................................................................................................................................................................................................... 24 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
..TCTTTGAAATGCGAAG........................................................................................................................................................................................................................................ 16 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
...........................CGGATAAATTTTGAATAGA............................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................ATAGAAAAGGTGAACATC............................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................CGTGACTGAAATCCGATTGGCTT..................................................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............CGAAGTTTTTCGATCGGATAAATT..................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............GAAGTTTTTCGATCGGATAA........................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............AAGTTTTTCGATCGGATAA........................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................AGTTTTTCGATCGGATAAATT..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.CTCTTTGAAATGCGAAGT....................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.....................................................................CTAGTCTGAATGGAGCGTGCCTT.............................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........TGCGAAGTTTTTCGATCGGATAAATT..................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................TCTGAATGGAGCGTGCCTTCGCGTGAC...................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.........................ATCGGATAAATTTGGAATAGAA........................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
................AGTTTTTCGATCGGATAAAT...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................AAAAGGCGAACATCCGGGGCGGA...................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................TTCGCGTGACTGAAATCCG............................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CTGAATGGAGCGTGCCTTCGC........................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...CTTTGAAATGCGAAGTTTTT................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...................TTTTCGATCGGATAAATTTTGAATA.............................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................CGGACGGATAAATTTTGA................................................................................................................................................................................................................. 18 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................AACTTTGAAAAGAGAGTGAAAA.............................................................................................. 22 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................AACTTTGAAAAGAGAGTGAAA............................................................................................... 21 3 19 0.16 3 0 0 0 0 1 2 0 0 0 0 0
...........................................................................................................................................TGAAAAGAGAGTGAAAA.............................................................................................. 17 1 16 0.13 2 0 0 0 0 0 2 0 0 0 0 0
.....................................................................................................................................AAGATTTGAAAAGAGAGTGAAA............................................................................................... 22 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................ACTTTGAAAAGAGAGTGAAAA.............................................................................................. 21 3 18 0.11 2 0 0 0 1 1 0 0 0 0 0 0
...............................................................................................................................................................................TAACTGTCAGACCAAGAGC........................................................ 19 3 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................CTGAATGGACCGTGGC................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................AATGTTTCGCAAGGGCA..................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TGAGAAACTTTACGCTTCAAAAAGCTAGCCTATTTAAAACTTATCTTTTCCACTTGTAGGCCCCGCCTAGATCAGACTTACCTCGCACGGAAGCGCACTGACTTTAGGCTAACCGGTGCGGATGACGGTGCCCTTTTATACTTTTCGCTCACTTTTAGTGTTGTTTGCGGTCCACATTGACCGTTTGTTTCTCGTCTTACAAAGCTTTCCCGCCACGTCACGTCACTATGTATGTTTTTGTTGCGGTTGA
**************************************************.......((((.(((((.((((.......))))(((((((.(((.((.......)).)))..)).)))))...))))).))))................((((...)))).......(((((......))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
................................................................CGCTAGGTCAGACTTACCTC...................................................................................................................................................................... 20 3 3 0.33 1 1 0 0 0
................................................................................................................TTGGTGCGGATGACGGTGCC...................................................................................................................... 20 2 3 0.33 1 0 1 0 0
...................................................ACTTGCAGGCCCCACC....................................................................................................................................................................................... 16 2 9 0.22 2 2 0 0 0
..............................................................................................................................................................TCGTGTTTTCGGTCCACATT........................................................................ 20 3 13 0.08 1 0 0 1 0
...........................................TCTTTTCCACTAGTCGG.............................................................................................................................................................................................. 17 2 17 0.06 1 0 1 0 0
...................................................................TAGCTCAGACTCACCTC...................................................................................................................................................................... 17 2 17 0.06 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:2985443-2985692 - dsi_15178 ACT-CTT----------TGAAATGCGAAG-TTTTTCGATCGGATAAATT-T------------T-GAAT-A-GAAAAGGTGAACATCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAATCCGATTGGCC-ACGCCTACTG--CCACGGGAAAA-TATGAAAA-----------GCGAGTGA-AAATCACAACAAACGCC----AGGTGTAACTGG------------------CAAACAAAG------AG---------CAGAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAAAACAAC------------------GCCAACT
droSec2 scaffold_2:3121116-3121365 - ACT-CTT----------TGAAATGCGAAG-TTTTTCGATCGGATAAATT-T------------G-GAAT-A-GAAAAGGTGAACATCCGTGG---------CAGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAATCCGATTGGCC-ACGCCTACTG--CCACGGGAAAA-TATGAAAA-----------GCGAGTGA-AAATCACAACAAACGAC----AGGTGTAACTGG------------------CAAACAAAG------AG---------CAAAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAAAACAAC------------------GCCAACT
dm3 chr3L:3127458-3127702 - ACT-CTT----------TGAAATGCGAAG-TTTTTCGATCGGATAAATT-T------------G-GAAT-A-GAAAAGGTGAACATCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAACCCGATTGGCC-ACGCCTACTG--CCACGGGAAAA-TATGAAAA-----------GCGAGTGA-AAATCACAACAAGCGCC----AGGTGTAACTGG------------------CAAACAAA--------------------GAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAAAACAAC------------------GCCAACT
droEre2 scaffold_4784:3135987-3136235 - ACT-CTT----------TGAAATGCGAAG-TTTTTCGATCGGATAAATT-T------------G-GAAT-A-GAAAAGGTGAACATCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAACCCGATTGGCC-ACGCCTACTG--CCACGGGAAAA-TATTAAAA-----------GCGAGTGA-AAATCACAACAAACGCC----AGGTGTAACAGG------------------CAAACAAAG------AG---------CAGAATGTTTC-----GAAAGGGCGGTGCAGTGC------TGTG-ATACATACAAAAACAAC------------------GCCAAC-
droYak3 3L:8815602-8815851 + ACT-CTT----------TGAAATGCGAAG-TTTTTCGATCGGATAAATT-T------------G-GAAT-A-AAAAAGGTGAACATCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAACCCGATTGGCC-ACGCCTACTG--CCACGGGAAAA-TATGAAAA-----------GCGAGTGA-AAATCACAACAAACGCC----AGGTGTAACTGG------------------CAAACAAAG------AG---------CAGAATGTTTC-----GAAAGGGCGGTGCAGTGC------TGTG-ATACATACAAAAACAAC------------------GCCAACT
droEug1 scf7180000409466:850112-850364 - ACT-CTT----------TGAAATGCGAAGATTTTTCGATCGGATAAAAT-T------------G-AAAT-A-GAAAAGGTGAATTTCCGGGG---------CGGATCTAGTCTGAATGAAGCGTTCCTTCGCGTGACTGAAATTCGATTGGCC-ACGCCTACTG--GTACGGGAAAA-TATGAAAA-----------GCGAGTGA-AAATCACAACAAATGCC----AGGTGGAACTGAGCA---TAAT--------AAAACAAAG------AG---------CAGAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAATAAAGC-----------------------CT
droBia1 scf7180000302428:2471881-2472147 - ACCACTT----------TGAAATGCGAAATTTTTTCGATCGGATAAAGT-A------------G-AAGC-G-GACAAGGTGAATTTCCGGGAATTTGCGGGCGGA-CTACTCTGAATGGAGCCTGTCCTCGCGTGACTGAAACTCCGTTGGCC-ACGCCTACAG--GCACGGGAAAA-CGTGGAAA-----------GCGAGTGA-AAATCACAACAAACGCC----AGGTGTG-CTGGGCAGCAGGGGAAAACGG-AAAACAA--------------------AGAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAATAC---------------------G-CGACT
droTak1 scf7180000415378:289893-290136 + TTA-CTT----------TGAAATGCGAGT-TTTTTCGATCGGATAAAAT-T------------G-AAAT-A-GAAAAGGTGAATATCCGGTG---------C--ATCTTAGCTGAATGGAGCGTGCGTTCGCGTGACTGAGATTCGATTGGCC-ACGCCTACTG--GCACGGGAAAA-TGTGAGAA-----------GCGAGTGA-AAATCACAACAAATGCC----AGGTGTAACTGGG-----------------CAAACAAAGCCAAGCAG---------CAGAATGTTTCGATTCGAAAGGGCGGTGCAGTGC------AGTG-ATACATAT----------------------------------
droEle1 scf7180000491249:2169352-2169607 + ACT-CTT----------TGAAATGTGAAGTTTTTTCGATCGGATAAAA--A------------G-AAAC-A-GAAAAGGTGAATTTCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCGTTCGCGTGACTGAAGTTCGATTGGCC-ACGCCTACTT--GCACGGGAAAAAGGTGAAAAACGAGTGGAAATCGAGTGA-AAATCTTATAAAATGCC----AGGTGTAATTGGCC-------------------ACAAAC------AA-------CAAAGAATGCTTC-----AAAAGGGCGGTGCAGTGC------AGTG-ATACATACTAATAAAGC-------------------------
droRho1 scf7180000777063:135556-135820 + ACT-CTT----------TGAAATGTGAAGTTTTTTCGATCGGATAAAAT-A------------G-AAAC-A-GAAAAGGTGAATTTCCCGGG---------CGGATCTAATCTGAATGGAGCGTGCGTTCGCGTGACTGAAGTTCGATTGGCC-ACGCCTACTT--GCACGGGAAAA-GGTGAAAAGCGCGTGGAAATCGAGTGA-AAATCCCAACGAATGCC----AGGTGTAACTGTGCA---AAGAAAAAGAGACAAACAA--------------------AGAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAATAAAGC-------------------------
droFic1 scf7180000454105:1441269-1441529 - ACT-CTT----------TCAAATGTGAAGTTTTTTCGATCGGATAAAAT-A------------G-AAAC-A-GAAAAGGTGAATATCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCGTTCGCGTGACTGAAATTCGATTGGCC-ACGCCTACTT--GTCCGGGAAAA-AGTGAAAA-----------TCAAGTGA-AAATCCCAGCAAATGCC----AGGTGAAACTGGGCTG--AAGG--------CAAACAAAG------AGCAAAAAGAGCAGAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAATAGAGC-------------------------
droKik1 scf7180000302577:1307112-1307370 - ACT-CTT----------TGAAATGTGAAAT--TTTCGGTCGGATGAAATCTG---------GTGGAAAA-ATATAAAGGTGAATATCCGAGG-------------------CTGAATGAAGTCTGCCTTCGCGTGACAGAAATTCGATTCGAC-ACGCCTACTATGGCCTGATAAAA-AGTGTTAA-----------ACACGAAG-AAACCCCCGTGAATGC-------------------A---AAGC--------CAAGCA-----------CAAAGAGGCAAGAATGTTTC-----GGAAGGGCGGAGGAGTGTACACAAAGTGAATACATACAAATATAAT--------CGTTCCACATG-CAACA
droAna3 scaffold_13337:8988989-8989235 + ACT-CCACGGTCGTGGGTGA-------AAA--TTTCGATCGGAGAATG--TGCCTGTGCCTGTGAAAACAAGAAAAAGGTGAAT--CCA-GG--------------------TGAATTAAGTGGTCGACTATCTGACAGAAATCAGACTCCCAGAGGTCTATC---------------------AAGTGCGTTGAAAGTGCCTCAGAAATCAAAACAACCGCCATTCAAGTGTAACGGTGGA---AAGG--------CAAACAAAG------AG---------CAGAATGTTTC-----GAAAGGGCGGTGCA-----------GTG-ATACACACAAACAA-GC-----------------------AT
droBip1 scf7180000395984:40202-40469 + ACT-CCACGGTCGTGGGTGA-------AAA--TTTCGATCGGAGAATG--TGCCAGTGCCTGTGAAAACAAGAAAAAGGTGAAT--CCA-GG--------------------TGAATTAAATGGTCGATTAACTGACTGAAATCAGACTCGTGGTGGTCTACTA---------------------AGTGCACCCAAAGTGTCTCAACAATCAAAACAACCGCCATTCAAGTGTAACGGTGCA---AAGG--------CAAACAAAG------AG-------C-CAGAATGTTTC-----GAAAGGGCGGTGCA-----------GTG-ATACATACAAACAA-GCATGGATATGTTTGTAC--A-TAAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACT-CTT----------TGAAATGCGAAG-TTTTTCGATCGGATAAATT-T------------T-GAAT-A-GAAAAGGTGAACATCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAATCCGATTGGCC-ACGCCTACTG--CCACGGGAAAA-TATGAAAA-----------GCGAGTGA-AAATCACAACAAACGCC----AGGTGTAACTGG------------------CAAACAAAG------AG---------CAGAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAAAACAAC------------------GCCAACTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................CGAAG-TTTTTCGATCGGA.......................................................................................................................................................................................................................................................................................................................................1814.00431000000000000000
..........................AAG-TTTTTCGATCGGATAAAT..................................................................................................................................................................................................................................................................................................................................2113.00320000000000001000
....................................GATCGGATAAATT-T------------T-GAAT-A-GAAA......................................................................................................................................................................................................................................................................................................2413.00300300000000000000
..T-CTT----------TGAAATGCGAAG-....................................................................................................................................................................................................................................................................................................................................................1612.00200000000002000000
.......................................CGGATAAATT-T------------T-GAAT-A-GA........................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...................................................................AT-A-GAAAAGGTGAACATC...........................................................................................................................................................................................................................................................................................1811.00100010000000000000
...................................................................................................................................CGTGACTGAAATCCGATTGGCT-T.......................................................................................................................................................................................................................2311.00100000000000001000
........................CGAAG-TTTTTCGATCGGATAAATT-................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
.........................GAAG-TTTTTCGATCGGATAA....................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
..........................AAG-TTTTTCGATCGGATAA....................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
...........................AG-TTTTTCGATCGGATAAATT-................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.CT-CTT----------TGAAATGCGAAG-T...................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
..........................................................................................................CTAGTCTGAATGGAGCGTGCCTT.................................................................................................................................................................................................................................................2311.00100000000000001000
......................TGCGAAG-TTTTTCGATCGGATAAATT-................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
..............................................................................................................TCTGAATGGAGCGTGCCTTCGCGTGAC.........................................................................................................................................................................................................................................2711.00100000000010000000
...........................AG-TTTTTCGATCGGATAAAT..................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
...............................................................................................................................TTCGCGTGACTGAAATCCG................................................................................................................................................................................................................................1911.00110000000000000000
...............................................................................................................CTGAATGGAGCGTGCCTTCGC..............................................................................................................................................................................................................................................2111.00100010000000000000
....CTT----------TGAAATGCGAAG-TTTTT...............................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
...............................TTTTCGATCGGATAAATT-T------------T-GAAT-A-..........................................................................................................................................................................................................................................................................................................2511.00100100000000000000
droSec2
ACT-CTT----------TGAAATGCGAAG-TTTTTCGATCGGATAAATT-T------------G-GAAT-A-GAAAAGGTGAACATCCGTGG---------CAGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAATCCGATTGGCC-ACGCCTACTG--CCACGGGAAAA-TATGAAAA-----------GCGAGTGA-AAATCACAACAAACGAC----AGGTGTAACTGG------------------CAAACAAAG------AG---------CAAAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAAAACAAC------------------GCCAACTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................ATT-T------------G-GAAT-A-GAAAAGGTGA................................................................................................................................................................................................................................................................................................2012.0021001
............................................AAATT-T------------G-GAAT-A-GAAAAGG...................................................................................................................................................................................................................................................................................................1911.0010001
............................................AAATT-T------------G-GAAT-A-GAAAAGGTGAACATC...........................................................................................................................................................................................................................................................................................2711.0011000
.......................................CGGATAAATT-T------------G-GAAT-A-GAAAAGG...................................................................................................................................................................................................................................................................................................2411.0010001
.................................TTCGATCGGATAAATT-T------------G-GAAT-A-GA........................................................................................................................................................................................................................................................................................................2511.0010001
........................CGAAG-TTTTTCGATCGGATA.....................................................................................................................................................................................................................................................................................................................................2011.0010001
.......................................................................................CGTGG---------CAGATCTAGTCTGAATG............................................................................................................................................................................................................................................................2211.0010010
.................................................................................................................................................................................................................................................................................................GTTTC-----GAAAGGGCGGTGCAGTGC------AG.............................................2511.0010001
.............................................AATT-T------------G-GAAT-A-GAAAAGG...................................................................................................................................................................................................................................................................................................1811.0010001
..............................................ATT-T------------G-GAAT-A-GAAAAGGTGAACATCCG.........................................................................................................................................................................................................................................................................................2711.0011000
............................................AAATT-T------------G-GAAT-A-GAAAAGGTGA................................................................................................................................................................................................................................................................................................2211.0010001
..............................................ATT-T------------G-GAAT-A-GAAAAGGTGAACATCC..........................................................................................................................................................................................................................................................................................2611.0010100
.........................................................................AAAAGGTGAACATCCGTGG---------CAGATCTAGT...................................................................................................................................................................................................................................................................2911.0010100
dm3
ACT-CTT----------TGAAATGCGAAG-TTTTTCGATCGGATAAATT-T------------G-GAAT-A-GAAAAGGTGAACATCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAACCCGATTGGCC-ACGCCTACTG--CCACGGGAAAA-TATGAAAA-----------GCGAGTGA-AAATCACAACAAGCGCC----AGGTGTAACTGG------------------CAAACAAA--------------------GAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAAAACAAC------------------GCCAACTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.........................GAAG-TTTTTCGATCGGATA.....................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................TGAATGGAGCGTGCCTTCGCG.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................AT-A-GAAAAGGTGAACATCCGGGG---------.............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................ATGCGAAG-TTTTTCGATCGGATAAATT-................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CGATCGGATAAATT-T------------G-GAAT-A-GAAA......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................GCC-ACGCCTACTG--CCACG.......................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAATGCGAAG-TTTTTCGAT...........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GGATCTAGTCTGAATGGAGCGTG.....................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................ATCGGATAAATT-T------------G-GAA..............................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTTTTCGATCGGATAAAT..................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CGCGTGACTGAAACCCGATTGG...........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................A-TATGAAAA-----------GCGAGTGA-AAATCA..............................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................TGAATGGAGCGTGCCTTCGCGTGA..........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ATCGGATAAATT-T------------G-GAAT-A-GAAAAG....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TTCGATCGGATAAATT-T------------G-GAAT-A-G.........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..T-CTT----------TGAAATGCGAAG-TT..................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................GG---------CGGATCTAGTCTGAATGGAGCGTG.....................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................CGCGTGACTGAAACCCGATTGGCC-AC......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AAAGGGCGGTGCAGTGC------AGTG-A.........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................TTTCGATCGGATAAATT-T------------G-GA...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGCGAAG-TTTTTCGATCGGATAAATT-................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TT----------TGAAATGCGAAG-TTTTTCGATCGGA.......................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GCGGTGCAGTGC------AGTG-ATA.......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................AAT-A-GAAAAGGTGAACATCCGG........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CGGATAAATT-T------------G-GAAT-A-GA........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T----------TGAAATGCGAAG-TTTTTCGATCGGAT......................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCGAAG-TTTTTCGATCGGATA.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TT-T------------G-GAAT-A-GAAAAGGTGA................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................CGGGG---------CGGATCTAGTCTG................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AAA-TATGAAAA-----------GCGAGTGA-AAAT................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................GTGACTGAAACCCGATTGGCC-A.......................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................AAATGCGAAG-TTTTTCGATCGGA.......................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
............................................................................AGGTGAACATCCGGGG---------CGGAT........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................................................ACGGGAAAA-TATGAAAA-----------G............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................GTGACTGAAACCCGATTGGC..........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GATAAATT-T------------G-GAAT-A-GAAAAGG...................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................AGGTGAACATCCGGGG---------CGG..........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................AAGGTGAACATCCGGGG---------CGGA.........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
................................................................................................................TGAATGGAGCGTGCCTTCGCGTGAC.........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGCGAAG-TTTTTCGATCGGATAAATT-T------------...................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................ATGAAAA-----------GCGAGTGA-AAATC...............................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACT-CTT----------TGAAATGCGAAG-TTTTTCGATCGGATAAATT-T------------G-GAAT-A-GAAAAGGTGAACATCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAACCCGATTGGCC-ACGCCTACTG--CCACGGGAAAA-TATTAAAA-----------GCGAGTGA-AAATCACAACAAACGCC----AGGTGTAACAGG------------------CAAACAAAG------AG---------CAGAATGTTTC-----GAAAGGGCGGTGCAGTGC------TGTG-ATACATACAAAAACAAC------------------GCCAAC-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................A-GAAAAGGTGAACATCCG.........................................................................................................................................................................................................................................................................................1811.0010001000
.................................TTCGATCGGATAAATT-T------------G-GAA..............................................................................................................................................................................................................................................................................................................2111.0010000010
ACT-CTT----------TGAAATGCGAAG-TT..................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.....................................ATCGGATAAATT-T------------G-GAAT-A-G.........................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
ACT-CTT----------TGAAATGCGAAG-TTTTTCGATCGGATAAATT-T------------G-GAAT-A-AAAAAGGTGAACATCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCCTTCGCGTGACTGAAACCCGATTGGCC-ACGCCTACTG--CCACGGGAAAA-TATGAAAA-----------GCGAGTGA-AAATCACAACAAACGCC----AGGTGTAACTGG------------------CAAACAAAG------AG---------CAGAATGTTTC-----GAAAGGGCGGTGCAGTGC------TGTG-ATACATACAAAAACAAC------------------GCCAACTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................TGACTGAAACCCGATTGGCC-A.......................................................................................................................................................................................................................2111.00100100000000
....................................................................................ATCCGGGG---------CGGATCTAGTCTGAATGGA..........................................................................................................................................................................................................................................................2711.00100000010000
........................................................................................................ATCTAGTCTGAATGGAGCGTGCCTTCGC..............................................................................................................................................................................................................................................2811.00100100000000
.....................................................................................................................................................................................................................................GTGTAACTGG------------------CAAACAAAG------AG---------CA.....................................................................................2311.00100000010000
.........................GAAG-TTTTTCGATCGGATAAATT-T------------G-G................................................................................................................................................................................................................................................................................................................2611.00100100000000
droEug1
ACT-CTT----------TGAAATGCGAAGATTTTTCGATCGGATAAAAT-T------------G-AAAT-A-GAAAAGGTGAATTTCCGGGG---------CGGATCTAGTCTGAATGAAGCGTTCCTTCGCGTGACTGAAATTCGATTGGCC-ACGCCTACTG--GTACGGGAAAA-TATGAAAA-----------GCGAGTGA-AAATCACAACAAATGCC----AGGTGGAACTGAGCA---TAAT--------AAAACAAAG------AG---------CAGAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAATAAAGC-----------------------CTSizeHit CountTotal NormTotal
No Reads
droBia1
ACCACTT----------TGAAATGCGAAATTTTTTCGATCGGATAAAGT-A------------G-AAGC-G-GACAAGGTGAATTTCCGGGAATTTGCGGGCGGA-CTACTCTGAATGGAGCCTGTCCTCGCGTGACTGAAACTCCGTTGGCC-ACGCCTACAG--GCACGGGAAAA-CGTGGAAA-----------GCGAGTGA-AAATCACAACAAACGCC----AGGTGTG-CTGGGCAGCAGGGGAAAACGG-AAAACAA--------------------AGAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAATAC---------------------G-CGACTSizeHit CountTotal NormTotal
No Reads
droTak1
TTA-CTT----------TGAAATGCGAGT-TTTTTCGATCGGATAAAAT-T------------G-AAAT-A-GAAAAGGTGAATATCCGGTG---------C--ATCTTAGCTGAATGGAGCGTGCGTTCGCGTGACTGAGATTCGATTGGCC-ACGCCTACTG--GCACGGGAAAA-TGTGAGAA-----------GCGAGTGA-AAATCACAACAAATGCC----AGGTGTAACTGGG-----------------CAAACAAAGCCAAGCAG---------CAGAATGTTTCGATTCGAAAGGGCGGTGCAGTGC------AGTG-ATACATAT----------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACT-CTT----------TGAAATGTGAAGTTTTTTCGATCGGATAAAA--A------------G-AAAC-A-GAAAAGGTGAATTTCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCGTTCGCGTGACTGAAGTTCGATTGGCC-ACGCCTACTT--GCACGGGAAAAAGGTGAAAAACGAGTGGAAATCGAGTGA-AAATCTTATAAAATGCC----AGGTGTAATTGGCC-------------------ACAAAC------AA-------CAAAGAATGCTTC-----AAAAGGGCGGTGCAGTGC------AGTG-ATACATACTAATAAAGC-------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACT-CTT----------TGAAATGTGAAGTTTTTTCGATCGGATAAAAT-A------------G-AAAC-A-GAAAAGGTGAATTTCCCGGG---------CGGATCTAATCTGAATGGAGCGTGCGTTCGCGTGACTGAAGTTCGATTGGCC-ACGCCTACTT--GCACGGGAAAA-GGTGAAAAGCGCGTGGAAATCGAGTGA-AAATCCCAACGAATGCC----AGGTGTAACTGTGCA---AAGAAAAAGAGACAAACAA--------------------AGAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAATAAAGC-------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ACT-CTT----------TCAAATGTGAAGTTTTTTCGATCGGATAAAAT-A------------G-AAAC-A-GAAAAGGTGAATATCCGGGG---------CGGATCTAGTCTGAATGGAGCGTGCGTTCGCGTGACTGAAATTCGATTGGCC-ACGCCTACTT--GTCCGGGAAAA-AGTGAAAA-----------TCAAGTGA-AAATCCCAGCAAATGCC----AGGTGAAACTGGGCTG--AAGG--------CAAACAAAG------AGCAAAAAGAGCAGAATGTTTC-----GAAAGGGCGGTGCAGTGC------AGTG-ATACATACAAATAGAGC-------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACT-CTT----------TGAAATGTGAAAT--TTTCGGTCGGATGAAATCTG---------GTGGAAAA-ATATAAAGGTGAATATCCGAGG-------------------CTGAATGAAGTCTGCCTTCGCGTGACAGAAATTCGATTCGAC-ACGCCTACTATGGCCTGATAAAA-AGTGTTAA-----------ACACGAAG-AAACCCCCGTGAATGC-------------------A---AAGC--------CAAGCA-----------CAAAGAGGCAAGAATGTTTC-----GGAAGGGCGGAGGAGTGTACACAAAGTGAATACATACAAATATAAT--------CGTTCCACATG-CAACASizeHit CountTotal NormTotal
No Reads
droAna3
ACT-CCACGGTCGTGGGTGA-------AAA--TTTCGATCGGAGAATG--TGCCTGTGCCTGTGAAAACAAGAAAAAGGTGAAT--CCA-GG--------------------TGAATTAAGTGGTCGACTATCTGACAGAAATCAGACTCCCAGAGGTCTATC---------------------AAGTGCGTTGAAAGTGCCTCAGAAATCAAAACAACCGCCATTCAAGTGTAACGGTGGA---AAGG--------CAAACAAAG------AG---------CAGAATGTTTC-----GAAAGGGCGGTGCA-----------GTG-ATACACACAAACAA-GC-----------------------ATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................AT--CCA-GG--------------------TGAATTAAGTGGTC....................................................................................................................................................................................................................................................2111.001000001
.............................A--TTTCGATCGGAGAATG--TGC.............................................................................................................................................................................................................................................................................................................................2011.001100000
....................................GATCGGAGAATG--TGCCTGTGCCTGTGA.................................................................................................................................................................................................................................................................................................................2711.001010000
........................................................................................................................................................................................................CCTCAGAAATCAAAACAACCGCC...................................................................................................................................................2311.001000001
droBip1
ACT-CCACGGTCGTGGGTGA-------AAA--TTTCGATCGGAGAATG--TGCCAGTGCCTGTGAAAACAAGAAAAAGGTGAAT--CCA-GG--------------------TGAATTAAATGGTCGATTAACTGACTGAAATCAGACTCGTGGTGGTCTACTA---------------------AGTGCACCCAAAGTGTCTCAACAATCAAAACAACCGCCATTCAAGTGTAACGGTGCA---AAGG--------CAAACAAAG------AG-------C-CAGAATGTTTC-----GAAAGGGCGGTGCA-----------GTG-ATACATACAAACAA-GCATGGATATGTTTGTAC--A-TAAATSizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 03:50 PM