ID:

dsi_15139

 Coordinate:

3r:26889459-26889608 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.0 -17.0 -16.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAACGGCCAAAAAGGTAACTGGGGCGAACGATGTCTAGGACAAGTGTCCCTCTATAAGGTGTGTGTCCGTTGCCGCAATCGAAGAGTTCGAGACGTCTTAAAAACAGTCCCAGAAAACTAGTACACACAATAAACACATTTTACACTGGAACTCCAATCTGTATCTTTCTATGTGTCTCCTTTAACGCGTGGTTACAAGATATGTAGTTTAGTC
*******************************************************((.(((.(((........(((((.....((........))....))))))))))).)).(((((...)))))...************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 M025
embryo
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
.......TCTGACAAACAGCCTGGACCAAATGGAGA...................................................................................................................................................................................................................... 29 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................GCAATCGAAGAGTTCGAGAC........................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TGACAAACAGCCTGGACCAAATGGAG....................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........TGACAAACAGCCTGGACCAAATGGAGA...................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........CTGACAAACAGCCTGGACCAAAT........................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................GTGTCCGTTGCCGCAATCGAAGAGTT.............................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................CGCAATCGAAGAGTTCGAGAC........................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GGTTACAAGATATGTAGTT..... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CTTAAAAACAGTCCCAGAAAACTAGT............................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
....................CTGGACCAAATGGAGATAACGGC............................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................TGGACCAAATGGAGATAACGG................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................GCCGCAATCGAAGAGTTCGAGAC........................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGGGGCGAACGATGTCTAGGACAAGTGT....................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
....CGGTCTGACAAACAGCCTGGACC............................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TGGGGCGAACGATGTCTAGGACAAGTG........................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............AACAGCCTGGACCAAATGGAGATAAC.................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................CGGCTTAAAAACAGTCCCA...................................................................................................... 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
........CTGACAAACAGCCTGGACCAAATGGAGA...................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................TGTGTCCGTTGCCGCAATCGAAGAGT............................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................GTTCGAGACGTCTTAAAAACAGT.......................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................TGTCTAGGACGGGTGTCCCTC.................................................................................................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............AACAGCCTGGACCAAATGGAAC...................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................GTTCGAGACTTCTTAGA................................................................................................................ 17 2 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................GAAGAGTTCGAGACC....................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................AAACAGTCCCAGAGTTCTA.............................................................................................. 19 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................TGGAACTACCATCTGTAGCT................................................ 20 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................CCAAAAAGGTAACGGAGG.............................................................................................................................................................................................. 18 2 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0
..........GAAAAACAGCCTGGAAC............................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................ATCTGTATCTTTCGA........................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
...............................GGAGATAATGGACAAGAAGG....................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AATTGCCAGACTGTTTGTCGGACCTGGTTTACCTCTATTGCCGGTTTTTCCATTGACCCCGCTTGCTACAGATCCTGTTCACAGGGAGATATTCCACACACAGGCAACGGCGTTAGCTTCTCAAGCTCTGCAGAATTTTTGTCAGGGTCTTTTGATCATGTGTGTTATTTGTGTAAAATGTGACCTTGAGGTTAGACATAGAAAGATACACAGAGGAAATTGCGCACCAATGTTCTATACATCAAATCAG
************************************************************************************************************************((.(((.(((........(((((.....((........))....))))))))))).)).(((((...)))))...******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 O001
Testis
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
......................................................................................................................................................................................................TACCAAGACACACAGAGGAAA............................... 21 3 2 2.00 4 4 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACCAAGACACACAGAGGAAA............................... 20 3 16 1.81 29 29 0 0 0 0 0 0 0 0
.............................................................CTTGCTACAGATCCTGTTCAC........................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................ACATAGAAAGATACACA...................................... 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0
................................................................................................................................................GGGTCTTTTGATCATGTGTGTTAT.................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................AAGACACACAGAGGAAA............................... 17 1 2 1.00 2 2 0 0 0 0 0 0 0 0
...................................................................................................ACAGGCAACGGCGTTAGCTTCTCAAGCT........................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0
..................................................................................................................................CAGAATTTTTGTCAGGGTC..................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGCGCACCAATGTTCTAT............ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................AACCAAGATACACAGAGGAAA............................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TACCAAGACACACAGAGGAA................................ 20 3 9 0.22 2 2 0 0 0 0 0 0 0 0
.....................................................................................................AGGCAACGGCCTTTGCTT................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................CAAGACACACAGAGGAAAGT............................. 20 3 15 0.13 2 2 0 0 0 0 0 0 0 0
..............................ACCTCTATTTCCGGT............................................................................................................................................................................................................. 15 1 16 0.13 2 0 0 0 0 0 0 0 0 2
.....................................................................................................................................ATCATTTGTCAGGGTCTT................................................................................................... 18 3 20 0.10 2 0 0 0 0 0 0 0 2 0
.........................................................................................................................................................................................................CAAGACACACAGAGGAAA............................... 18 2 15 0.07 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AAGACACACAGAGGAAAG.............................. 18 2 19 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................AGGCAACGGCTCTAGC..................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................................CCAAGACACACAGAGGAAA............................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:26889409-26889658 + dsi_15139 TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTGGGGCGAAC---GATGTCTAGG------ACAAGTGTCCCTCT------ATAAGGTGTGTGT-------------------------CCGTTGCCGCAATCGAAGA-------GTT--CGAGA-CGTCTTAAAAACAGTC---CC-A------GAAAAC---------------------TAGTACACACAATAAACAC-----A--TTTTACAC-----TG-------GAACTCCAAT-CTGTATCTTT--CTA--TGT--GTCTCCTTTAACGCGTGGTT-----ACAAGA--------------TATGTAG---T-TTAGTC
droSec2 scaffold_31:268418-268667 + TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTGGGGCGAAC---GATGTCTAGG------ACAAGTGTCCCTCT------ATAAGGTGTGTGT-------------------------CCGTTGCCGCAATCGAAGA-------GTT--CGAGA-CGTCTTAAAAACAGTC---CC-A------GAAAAC---------------------TAGTACACACAATAAACAC-----A--TTTTACAC-----TG-------GAACTCTAAT-CTGTATCTTT--CTA--TGT--GTCTCCTTTAACGCGTGGTT-----ACAAGA--------------TATGTAG---T-TTAGTC
dm3 chr3R:27613870-27614118 + TTAACGGACTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTCGGGCGAAC---AATGTCTAGG------ACAAGTGTCCATCT------ATAAGGTGTGTGT-------------------------CCGTTGCCGCAATTGAAGA-------GTT--CGAGA-CGTCTA-AAAACAGTC---CC-A------GAAAAC---------------------TAGTAAACACAACAAACAC-----A--TTTTACAC-----TG-------GAACTCCAAT-CTGTATCTTT--CTA--TCT--GTCTTCTTTAATACGTGGAT-----AGAAGA--------------TATGTAG---T-TTAGTC
droEre2 scaffold_4820:356561-356803 - TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTAGGGCGAAC---GATGTCTAGG------ACAGTAGTCCCTCT------ATAAA--GTGTGT-------------------------CCGTTGCCGCAAAGGAAGT-------CTT--CGAGA-CGTCTTAATACCAGTC---CC-A------GAAAAC---------------------TATAACACACAATAAACAC-----A--TTTTACAC-----TG-------GAACTCCAAT-CTGTATCTTT--CTA--TCT--GTCTCCTTCAACACTTGTTT-----ACTAGA--------------TATAA---------AGTC
droYak3 3R:28548442-28548684 + TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTGGGGCGAAC---GATGTCTAGG------ACAATAGTCCCTCT------ATAAA--GTGTGT-------------------------CCGTTGCCGCAAAGGAAGT-------CTT--CGAGA-CGTCTTAAAAACAGTC---CC-A------GAAAAC---------------------TAGTACACACAATAAACAC-----A--TTTTACAC-----TG-------GAACTCCAAT-CTGTATCTTT--CTA--TCT--GTCTCCTTTAACACGTGGTT-----ACTAGA--------------TATAT---------AGTC
droEug1 scf7180000409488:289277-289525 - TTAACGGTTTAACAAACAGCCTGGATCAAATGGAGATAA---CGGCCAAAAAGGT------AACTAGGGTGGAC---GAAGTCTAGG------ACAATTGTGCCTCT------GTTAA--GTGTGT-------------------------CCGTAGTCCC---GGGATT-------CCT--TGAGA-CGTCTGCCAAGCAGC-CC-CC-A------GCAAAC---------------------CAGTACACACAATAAACAC-----ACATTTTACAC-----TC-------CAACTCCAAT-CTGTATCTCT--C------T--GTTTCCTTGAACACGTGGTT---CTA-TAGT--------------TATAGACTTTTTTCAGTT
droBia1 scf7180000302035:280056-280303 + TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTAGGGAGGAC---GAGGTCTAGG------ACAGTTGTCCTTCT------TAAAG--GTGTGT-------------------------CCGTAGCCGA---GGGATC-------TTT--CGAGA-CGTCTGCCAAGCAGC-GC-CC-A------GCAAAC---------------------CAGTACACACAATAAACAC-----A--TTTTACAC-----TC-------CAATTCCAAT-CTGTATCTAT--CTA--TCT--GTCTCCTTGAACACGTGGTT-----ACTTTA-----G--C-----TAAATAA---C-TTTTTA
droTak1 scf7180000415712:707308-707549 + TCAATGGTCTGACCAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTGGGGCGGACGAGGAGGTCTAGGG-----A---------CTCT------GTAGA--GTGTGT-------------------------CTGTAGCCGA---GGGATCCTGATC-CTC--TGAGA-CGCCTGCCAAGCAGC-CC-CC-A------GCAAAC---------------------CAGTACACACAATAAACAC-----A--TTTTACAC-----TC-------CAACTCCAAT-CTGTATCTCT--CTA--TCT--GTCTCCTCAAACGAGTGGTT-----A-TAGT--------------TATAGAA--------CTT
droEle1 scf7180000491194:1667677-1667921 + TTAACGGGCTGTCGAGTAGCCTGGATCAAATGGAGATTA---CGGCCAAAAAGGT------AACTAGGACAGAC---GAGGTCTAGG------ACATTTGCCCCTCT------GTTAA--GTGTGTT------------------------CTGCACCCGA---AGGATC-------CTT--CGAGT-CGCCTGCCAAGCGGC-CA-CC-A------ACAAAA---------------------CAGTACACACAATAAACAC-----A--TTTTACAC-----TC-------CAACTCCAAT-CTGTATCTA--------TCT--GTTTTCATAAATACTTAGCA-----ACTAGAAC------------TTTGAAA---C-TAGTGC
droRho1 scf7180000779322:74602-74823 - TTAACGGGCTGTCAAGTAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTAGGGCGGAC---GAGGTCTAGG------ACAGTTGTCCCTCT------GTTGA--GTGTGT-------------------------CCGTACCCGA---AGGTTC-------CTT--CGAGT-CGCCTGCCAAGCAGACCC-CC-A------GCAAAA---------------------CAGTACACACAATAAACAC-----A--TTTTACAC-----TC-------CAACTCCAAT-CTGTATCTTT--C------T--GTCACCTTAAATACGTGGT--------------------------------------------
droFic1 scf7180000454097:39451-39712 + TCAACGGGCTGACAAACAGCCTCGACCAAATGGAGCTAA---CGGCCAAAAAGGT------AACTAGAGCGGAC---AAGGTCTAGG------ACAGTTGTCCCTCT------GTTGA--GTGTGT-------------------------CCGAAGCCGC---GGGATC-------CTT--TGAGT-CGCCTGCCAAGCAGG-CC-CC-A------GCGTAA---------------------CAGTAGACACAATAAACAC-----A--TTTTACAC-----TC-------CAAATCCAAT-CTGTATCTCT--CTA--TCT--GTCTCCCTAAACCCGAGGTAATCCT-----ACCTTCGACCAGAGCTATGGACAATT-TTAG-T
droKik1 scf7180000301641:97472-97698 + TAAACGGGCTGACGAACAGCCTGGATCAGATGGAGATAA---CGACCAAAAAGGT------AATTGATGAGGAC---AGGGTTTAGG------AC---------TTT------GT-GA--GTGTGT-------------------------CCGAAGCCGAGA-GGGAAC-------CCTCAAGAGT-CGCCTGCCAAGTAGTCCC-CC-A------GGA---GCAGAAA--------------CAGTACACACAATAAACAC-----ACGATATACACACAATTC-------CAACTTCAATTCTGCGTCTCT--AAA--TCTTTGTGTCTTTGA---------------------------------------------------CC
droAna3 scaffold_12911:3471220-3471479 - TAAATGGGCTGACCAATCGATTGGACCATATGGAAATCA---AGGCCAAAAAGGT------AACTAAGAACTCG---GATGCCTAGG------GCAGCTATTCCC-TAGGGCAGTTAA--GTGTGT-------------------------CCACAGCCGA---GGGATC-------CTT--CCAGT-CGCCTGCCAAGCAGTC-CTCC-TCCAAAAACAAAA---------------------CAGTACACACAAGATACACACCACA--CTCTACAC-----TC-------CAGATCCAAT-AT-TATCTAT--CTA--T-T--ACATCC-----CGTGTGGTGGTTAT-----ACTTTTG--C--------AGAG---T-ATAAGA
droBip1 scf7180000396640:334970-335206 - TAAATGGGCTGACCAACCGATTGGACCAAATGGAAATCA---AGGCCAAAAAGGT------AACTAAGAACACG---GATGCCTAGG------GCGTTATTCC--CT------GTT-A--GTGTGT-------------------------CCACAGCCGA---GGGATT-------CTT--CCAGT-CGCCTGCCAAGCAGTC-CTCC-T------TCAAAA---------------------CAGTACACACGATATACAC-----A--CTCTACAC-----TC-------CACATCCAAT-A-ATATCTAT--CTATTCCT--------------ATGTGGTGGTTAT-----ACTTTTG--C--------AGAG---T-ATGATA
dp5 2:14059538-14059783 + TAAACGGGCTGACCAACAGCCTGGATCACATGGATATATCATCAGTGAAAAAGGTACGAGCAACTGGCGGGGAG---GATGGCCAGAGGTAGCCGAG---------------------TAGTGCGTCCCCTCCTTCCATT------------------CCA---AGGATT---------------GT-CTCCTGCCAAGCAGC-TGTCCCACCA---GAA---ACAGAAACACCAAAACATACACAG--GACACAAAGGATAC-----A--CTCTACAC-----TCTACCCAGCAGCTCCTGT-ATCTCTCTCT--CTC--ACT--ATCTCCCC------------------------------------------------------T
droPer2 scaffold_0:6381998-6382241 - TAAACGGGCTGACCAACAGCCTGGATCACATGGAGATATCATCAGTGAAAAAGGTACGAGCAACTGGCGGGGAG---GATGGCTAGAGGTAGCCGAG---------------------TAGTGCGTCCCCTCCTTCCATT------------------CCA---AGGATT---------------GT-CTCCTGACAAGCAGC-TGTCCCACCA---GAA---ACAGAAACACCAAAACATACACAG--GACACAAAGGATAC-----A--CTCTACAC-----TCTACCCAGCAGCTCC-----TGTATCTCTCTCTC--ACT--ATCTCCCC------------------------------------------------------T
droWil2 scf2_1100000004943:9144232-9144453 - TAAATGGCATCACAAATAGTATGGAACACGTTGAAAATT---CAGTAAAAAAGGT------AACTAGTGAGACT---------TAGG------CCCTTTTTTTTTTC------AT------------------------TTAAGATTGGGAAATTATTAGCAAGTGAAAA------GATTAAAGATTTCTTTACCAAAGCAGT-TC-AA-G------CCATAC---------------------AAATACAAACAATAAACAC-----A--TTGAACAC-----TA--TCC--AAACTCCTTT-CTCTCTCTCC--CTC--TCT--CTCTCTCT------------------------------------------------------T
droVir3 scaffold_13047:11147401-11147428 + TAAATGGCCTTACCAACAGTTTGGATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:30611808-30611866 - TAAATGGCCTCACTAACAGTGTGGAGCATCTGAAAATGT---CAATGGAAAAGGT------AACTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:11554109-11554168 - GT----------------------------------------------------------------------------------------------------------------------GTGTGT-------------------------CTGTGGCCACAATAGATAG-------TCT--CGAAG-CGCTGCAGATACTCTC---TT-A------GATGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTGGGGCGAAC---GATGTCTAGG------ACAAGTGTCCCTCT------ATAAGGTGTGTGT-------------------------CCGTTGCCGCAATCGAAGA-------GTT--CGAGA-CGTCTTAAAAACAGTC---CC-A------GAAAAC---------------------TAGTACACACAATAAACAC-----A--TTTTACAC-----TG-------GAACTCCAAT-CTGTATCTTT--CTA--TGT--GTCTCCTTTAACGCGTGGTT-----ACAAGA--------------TATGTAG---T-TTAGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......TCTGACAAACAGCCTGGACCAAATGGAGA.................................................................................................................................................................................................................................................................................................................................................................2912.00200000011000000000
...............................................................................................................................................................GCAATCGAAGA-------GTT--CGAGA-C........................................................................................................................................................................................................2011.00101000000000000000
.........TGACAAACAGCCTGGACCAAATGGAG..................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.........TGACAAACAGCCTGGACCAAATGGAGA.................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
........CTGACAAACAGCCTGGACCAAAT......................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..........................................................................................................................GTGT-------------------------CCGTTGCCGCAATCGAAGA-------GTT--...............................................................................................................................................................................................................2611.00100000000010000000
..............................................................................................................................................................CGCAATCGAAGA-------GTT--CGAGA-C........................................................................................................................................................................................................2111.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................GGTT-----ACAAGA--------------TATGTAG---T-T.....1911.00101000000000000000
...............................................................................................................................................................................................CTTAAAAACAGTC---CC-A------GAAAAC---------------------TAGT.............................................................................................................................................2611.00100010000000000000
....................CTGGACCAAATGGAGATAA---CGGC.......................................................................................................................................................................................................................................................................................................................................................2311.00100000000000010000
.....................TGGACCAAATGGAGATAA---CGG........................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
............................................................................................................................................................GCCGCAATCGAAGA-------GTT--CGAGA-C........................................................................................................................................................................................................2311.00101000000000000000
................................................................TGGGGCGAAC---GATGTCTAGG------ACAAGTGT................................................................................................................................................................................................................................................................................................2811.00100010000000000000
....CGGTCTGACAAACAGCCTGGACC..........................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
................................................................TGGGGCGAAC---GATGTCTAGG------ACAAGTG.................................................................................................................................................................................................................................................................................................2711.00100000000000010000
..............AACAGCCTGGACCAAATGGAGATAA---C..........................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
........CTGACAAACAGCCTGGACCAAATGGAGA.................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
.........................................................................................................................TGTGT-------------------------CCGTTGCCGCAATCGAAGA-------GT..................................................................................................................................................................................................................2611.00100000010000000000
.................................................................................................................................................................................GTT--CGAGA-CGTCTTAAAAACAGT..........................................................................................................................................................................................2311.00100100000000000000
..............AACAGCCTGGACCAAATGGAAC.................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.....................................................................................................................................................................GAAGA-------GTT--CGAGA-CC.......................................................................................................................................................................................................1570.14100000000010000000
droSec2
TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTGGGGCGAAC---GATGTCTAGG------ACAAGTGTCCCTCT------ATAAGGTGTGTGT-------------------------CCGTTGCCGCAATCGAAGA-------GTT--CGAGA-CGTCTTAAAAACAGTC---CC-A------GAAAAC---------------------TAGTACACACAATAAACAC-----A--TTTTACAC-----TG-------GAACTCTAAT-CTGTATCTTT--CTA--TGT--GTCTCCTTTAACGCGTGGTT-----ACAAGA--------------TATGTAG---T-TTAGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................CTAGG------ACAAGTGTCCCTCT------ATAAGGT.............................................................................................................................................................................................................................................................................2611.0010010
.........................CCAAATGGAGATAA---CGGCC......................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................................ATAA---CGGCCAAAAAGGT------AACTGGGGC...............................................................................................................................................................................................................................................................................................................................2611.0010010
.............................................................AACTGGGGCGAAC---GATGT...................................................................................................................................................................................................................................................................................................................1811.0010010
..........................................................................................................................GTGT-------------------------CCGTTGCCGCAATCGAAGA-------G...................................................................................................................................................................................................................2411.0010010
........CTGACAAACAGCCTGGACCAAATGGA...................................................................................................................................................................................................................................................................................................................................................................2611.0010010
...............ACAGCCTGGACCAAATGGA...................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
TTAACGGACTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTCGGGCGAAC---AATGTCTAGG------ACAAGTGTCCATCT------ATAAGGTGTGTGT-------------------------CCGTTGCCGCAATTGAAGA-------GTT--CGAGA-CGTCTA-AAAACAGTC---CC-A------GAAAAC---------------------TAGTAAACACAACAAACAC-----A--TTTTACAC-----TG-------GAACTCCAAT-CTGTATCTTT--CTA--TCT--GTCTTCTTTAATACGTGGAT-----AGAAGA--------------TATGTAG---T-TTAGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................GGAGATAA---CGGCCAAAAA.................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AACGGACTGACAAACAGCC................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TT--CGAGA-CGTCTA-AAAACAGT..........................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000001000000000000
...................................................................................................................................................................................................................................................................................................................................................CGTGGAT-----AGAAGA--------------TATGTAG---........2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AAC---AATGTCTAGG------ACAAGTGT................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AAGTGTCCATCT------ATAAGGTGT...........................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CACAACAAACAC-----A--TTTTACAC-----TG-------GAAC............................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACGGACTGACAAACAGCCTGGACCAAAT......................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ACTGACAAACAGCCTGGACCA.........................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGGACCAAATGGAGATAA---CGGCC......................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................ATTGAAGA-------GTT--CGAGA-CGTCT....................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGACTGACAAACAGCCTGGACCAAAT......................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCAAATGGAGATAA---CGGCC......................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAACGGACTGACAAACAGCCT...............................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ATCT------ATAAGGTGTGTGT-------------------------CCGT..........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGGACCAAATGGAGATAA---G..........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
......................GGACCAAATGGAGATAA---CGGC.......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGACAAACAGCCTGGACCAAATGGA...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................CATCT------ATAAGGTGTGTGT-------------------------CCG...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGACTGACAAACAGCCTGGACCA.........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTAACGGACTGACAAACAGC.................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACAGCCTGGACCAAATGGAGATAA---CG.........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CAAGTGTCCATCT------ATAAGGTGTGTG........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTCTTTAATACGTGGAT-----AGAAGA--------------TA................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACGGACTGACAAACAGCCTGG.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGCCTGGACCAAATGGAGATA...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TGAAGA-------GTT--CGAGA-CGTCTA-AAAACAG...........................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GTTGCCGCAATTGAAGA-------GTT--CG.............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................TTCTTTAATACGTGGAT-----AGAAGA--------------TATG..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................A--TCT--GTCTTCTTTAATACGTG..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCAAATGGAGATAA---CGGCCAAAAAGAA------........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TACGTGGAT-----AGAAGA--------------TATGTAG---T-T.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAACGGACTGACAAACAGCCTGGACCA.........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AACAGCCTGGACCAAATGGAGAT................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................G------ACAAGTGTCCATCT------ATAAGG..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................ACAC-----A--TTTTACAC-----TG-------GAACTC..........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
................CAGCCTGGACCAAATGGAGAT................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CGGCCAAAAAGGT------AACTCGGGCG..............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAATGGAGATAA---CGGCCAAAAAGGT------........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................CATCT------ATAAGGTGTGTGT-------------------------CC............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TGCCGCAATTGAAGA-------GTT--CGA............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTGGACCAAATGGAGATAA---CGGCATC....................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTGGACCAAATGGAGATAA---CGGC.......................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AGA-------GTT--CGAGA-CGTCTA-AAAA..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CAGCCTGGACCAAATGGAGATAA---CGGC.......................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ATCT------ATAAGGTGTGTGT-------------------------CC............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................TATCTTT--CTA--TCT--GTCTTCTT.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GGCCAAAAAGGT------AACTCGGGCG..............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................CGTTGCCGCAATTGAAGA-------GT..................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTAACGGACTGACAAACAGCC................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAACAGCCTGGACCAAATGG....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTGACAAACAGCCTGGACC..........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TAAGGTGTGTGT-------------------------CCGTTGCCG.....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAACGGACTGACAAACAGC.................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGACTGACAAACAGCCTGGACCAAA.......................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GTTGCCGCAATTGAAGA-------GTT--C..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....CGGACTGACAAACAGCCTGGACC..........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CGTGGAT-----AGAAGA--------------TATGT.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.......ACTGACAAACAGCCTGGACCAAATGGA...................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................ACAAGTGTCCATCT------ATAAGGT.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.................AGCCTGGACCAAATGGAGAT................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GCGAAC---AATGTCTAGG------ACAAG...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCAAATGGAGATAA---CGGCCAAAAAG................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GAAC---AATGTCTAGG------ACAAGTGTCCATCT------....................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................GCCGCAATTGAAGA-------GTT--CGAGA-C........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATGGAGATAA---CGGCCAAAAAGAA------G.......................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TCGGGCGAAC---AATGTCTAGG------........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGACAAACAGCCTGGACCAAATGGAG..................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GTGGAT-----AGAAGA--------------TATGTA............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.TAACGGACTGACAAACAGCCTGGAC...........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACAAACAGCCTGGACCAAATGG....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................CAC-----TG-------GAACTCCAAT-CTGTA................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGGACCAAATGGAGATAA---CGGC.......................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACAAACAC-----A--TTTTACAC-----TG-------GAAAA...........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TTGCCGCAATTGAAGA-------GT..................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TAAGGTGTGTGT-------------------------CCGTTGCCGCAATT................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............CAAACAGCCTGGACCAAATGGAGATA...............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................T------ATAAGGTGTGTGT-------------------------CCGTTGCA......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................A------GAAAAC---------------------TAGTAAACACAACAAACAC-----A--T.....................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GACTGACAAACAGCCTGGACCAAATG.....................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTAGGGCGAAC---GATGTCTAGG------ACAGTAGTCCCTCT------ATAAA--GTGTGT-------------------------CCGTTGCCGCAAAGGAAGT-------CTT--CGAGA-CGTCTTAATACCAGTC---CC-A------GAAAAC---------------------TATAACACACAATAAACAC-----A--TTTTACAC-----TG-------GAACTCCAAT-CTGTATCTTT--CTA--TCT--GTCTCCTTCAACACTTGTTT-----ACTAGA--------------TATAA---------AGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................GAAC---GATGTCTAGG------ACAGT...................................................................................................................................................................................................................................................................................................1911.0010001000
............................................................................................................................GT-------------------------CCGTTGCCGCAAAGGA..............................................................................................................................................................................................................................1811.0010100000
............................................................................................................................................................GCCGCAAAGGAAGT-------CTT--CGAGA-CGT......................................................................................................................................................................................................2511.0010000100
.........TGACAAACAGCCTGGACCAAATG.....................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.........................CCAAATGGAGATAA---CGGCCAAAAA.................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.....................................................................................................................A--GTGTGT-------------------------CCGTTGCCGCAAAGGAAGT-------....................................................................................................................................................................................................................2611.0010000010
...................................................AGGT------AACTAGGGCGAAC---GATGTCTA................................................................................................................................................................................................................................................................................................................2511.0010000010
.........................................................................................................CT------ATAAA--GTGTGT-------------------------CCGTTGC.......................................................................................................................................................................................................................................2011.0011000000
......................GGACCAAATGGAGATAA---CGGCCA.....................................................................................................................................................................................................................................................................................................................................................2311.0010001000
........................ACCAAATGGAGATAA---CGGC.......................................................................................................................................................................................................................................................................................................................................................1911.0010000010
......................................................................................................................................................................................................................................................................................................................CTTT--CTA--TCT--GTCTCCTTCAACACTTA..............................................2711.0010001000
............................................................................................................................GT-------------------------CCGTTGCCGCAAAGGAAGT-------CT..................................................................................................................................................................................................................2311.0010000010
........................................................................................................TCT------ATAAA--GTGTGT-------------------------CCGTTGCC......................................................................................................................................................................................................................................2211.0010010000
.........................................................................................................................................................GTTGCCGCAAAGGAAGT-------CTT--CGA............................................................................................................................................................................................................2311.0010000010
........CTGACAAACAGCCTGGACCAAAT......................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
droYak3
TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTGGGGCGAAC---GATGTCTAGG------ACAATAGTCCCTCT------ATAAA--GTGTGT-------------------------CCGTTGCCGCAAAGGAAGT-------CTT--CGAGA-CGTCTTAAAAACAGTC---CC-A------GAAAAC---------------------TAGTACACACAATAAACAC-----A--TTTTACAC-----TG-------GAACTCCAAT-CTGTATCTTT--CTA--TCT--GTCTCCTTTAACACGTGGTT-----ACTAGA--------------TATAT---------AGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................ATAAA--GTGTGT-------------------------CCGTTGCC......................................................................................................................................................................................................................................1911.00100000010000
.........................................................................................................................................................GTTGCCGCAAAGGAAGT-------CTT--CGAGA-CGT......................................................................................................................................................................................................2811.00100000010000
..........GACAAACAGCCTGGACCAA........................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................................................................................................................................................................................................................................................................................................................................TCT--GTCTCCTTTAACACGTGGT............................................2211.00101000000000
...............................................................................................AATAGTCCCTCT------ATAAA--GTGTGT-------------------------CC............................................................................................................................................................................................................................................2511.00101000000000
.........................................................................................................................................................................................................................................................CACACAATAAACAC-----A--TTTTACAC-----TG-------................................................................................................2511.00110000000000
...............................................AAAAAGGT------AACTGGGGCGAAC---........................................................................................................................................................................................................................................................................................................................2111.00100000010000
......................................................................GAAC---GATGTCTAGG------ACAATAGT................................................................................................................................................................................................................................................................................................2211.00100100000000
............................................................................................................................................................GCCGCAAAGGAAGT-------CTT--CG.............................................................................................................................................................................................................1911.00100000010000
.......................GACCAAATGGAGATAA---CGGC.......................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
............CAAACAGCCTGGACCAAATGGAGAT................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
droEug1
TTAACGGTTTAACAAACAGCCTGGATCAAATGGAGATAA---CGGCCAAAAAGGT------AACTAGGGTGGAC---GAAGTCTAGG------ACAATTGTGCCTCT------GTTAA--GTGTGT-------------------------CCGTAGTCCC---GGGATT-------CCT--TGAGA-CGTCTGCCAAGCAGC-CC-CC-A------GCAAAC---------------------CAGTACACACAATAAACAC-----ACATTTTACAC-----TC-------CAACTCCAAT-CTGTATCTCT--C------T--GTTTCCTTGAACACGTGGTT---CTA-TAGT--------------TATAGACTTTTTTCAGTTSizeHit CountTotal NormTotal
No Reads
droBia1
TTAACGGTCTGACAAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTAGGGAGGAC---GAGGTCTAGG------ACAGTTGTCCTTCT------TAAAG--GTGTGT-------------------------CCGTAGCCGA---GGGATC-------TTT--CGAGA-CGTCTGCCAAGCAGC-GC-CC-A------GCAAAC---------------------CAGTACACACAATAAACAC-----A--TTTTACAC-----TC-------CAATTCCAAT-CTGTATCTAT--CTA--TCT--GTCTCCTTGAACACGTGGTT-----ACTTTA-----G--C-----TAAATAA---C-TTTTTASizeHit CountTotal NormTotal
No Reads
droTak1
TCAATGGTCTGACCAACAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTGGGGCGGACGAGGAGGTCTAGGG-----A---------CTCT------GTAGA--GTGTGT-------------------------CTGTAGCCGA---GGGATCCTGATC-CTC--TGAGA-CGCCTGCCAAGCAGC-CC-CC-A------GCAAAC---------------------CAGTACACACAATAAACAC-----A--TTTTACAC-----TC-------CAACTCCAAT-CTGTATCTCT--CTA--TCT--GTCTCCTCAAACGAGTGGTT-----A-TAGT--------------TATAGAA--------CTTSizeHit CountTotal NormTotal
No Reads
droEle1
TTAACGGGCTGTCGAGTAGCCTGGATCAAATGGAGATTA---CGGCCAAAAAGGT------AACTAGGACAGAC---GAGGTCTAGG------ACATTTGCCCCTCT------GTTAA--GTGTGTT------------------------CTGCACCCGA---AGGATC-------CTT--CGAGT-CGCCTGCCAAGCGGC-CA-CC-A------ACAAAA---------------------CAGTACACACAATAAACAC-----A--TTTTACAC-----TC-------CAACTCCAAT-CTGTATCTA--------TCT--GTTTTCATAAATACTTAGCA-----ACTAGAAC------------TTTGAAA---C-TAGTGCSizeHit CountTotal NormTotal
No Reads
droRho1
TTAACGGGCTGTCAAGTAGCCTGGACCAAATGGAGATAA---CGGCCAAAAAGGT------AACTAGGGCGGAC---GAGGTCTAGG------ACAGTTGTCCCTCT------GTTGA--GTGTGT-------------------------CCGTACCCGA---AGGTTC-------CTT--CGAGT-CGCCTGCCAAGCAGACCC-CC-A------GCAAAA---------------------CAGTACACACAATAAACAC-----A--TTTTACAC-----TC-------CAACTCCAAT-CTGTATCTTT--C------T--GTCACCTTAAATACGTGGT--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCAACGGGCTGACAAACAGCCTCGACCAAATGGAGCTAA---CGGCCAAAAAGGT------AACTAGAGCGGAC---AAGGTCTAGG------ACAGTTGTCCCTCT------GTTGA--GTGTGT-------------------------CCGAAGCCGC---GGGATC-------CTT--TGAGT-CGCCTGCCAAGCAGG-CC-CC-A------GCGTAA---------------------CAGTAGACACAATAAACAC-----A--TTTTACAC-----TC-------CAAATCCAAT-CTGTATCTCT--CTA--TCT--GTCTCCCTAAACCCGAGGTAATCCT-----ACCTTCGACCAGAGCTATGGACAATT-TTAG-TSizeHit CountTotal NormTotal
No Reads
droKik1
TAAACGGGCTGACGAACAGCCTGGATCAGATGGAGATAA---CGACCAAAAAGGT------AATTGATGAGGAC---AGGGTTTAGG------AC---------TTT------GT-GA--GTGTGT-------------------------CCGAAGCCGAGA-GGGAAC-------CCTCAAGAGT-CGCCTGCCAAGTAGTCCC-CC-A------GGA---GCAGAAA--------------CAGTACACACAATAAACAC-----ACGATATACACACAATTC-------CAACTTCAATTCTGCGTCTCT--AAA--TCTTTGTGTCTTTGA---------------------------------------------------CCSizeHit CountTotal NormTotal
No Reads
droAna3
TAAATGGGCTGACCAATCGATTGGACCATATGGAAATCA---AGGCCAAAAAGGT------AACTAAGAACTCG---GATGCCTAGG------GCAGCTATTCCC-TAGGGCAGTTAA--GTGTGT-------------------------CCACAGCCGA---GGGATC-------CTT--CCAGT-CGCCTGCCAAGCAGTC-CTCC-TCCAAAAACAAAA---------------------CAGTACACACAAGATACACACCACA--CTCTACAC-----TC-------CAGATCCAAT-AT-TATCTAT--CTA--T-T--ACATCC-----CGTGTGGTGGTTAT-----ACTTTTG--C--------AGAG---T-ATAAGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................GTGGTTAT-----ACTTTTG--C--------AGAG---T-......2112.002000002
................................................................................................................................................................A---GGGATC-------CTT--CCAGT-CGCCTT...................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................CACACCACA--CTCTACAC-----TC-------C...............................................................................................2011.001100000
......................................................................................G------GCAGCTATTCCC-TAGGGCAGT..................................................................................................................................................................................................................................................................................2211.001000010
......................................................................................................................................................................................................................................................................CACCACA--CTCTACAC-----TC-------CAGAT...........................................................................................2211.001100000
.........................................................................................................................................................................................GT-CGCCTGCCAAGCAGTC-CTCC-TCCAA..............................................................................................................................................................................2711.001010000
...............................................AAAAAGGT------AACTAAGAACTCG---GA......................................................................................................................................................................................................................................................................................................................2311.001000010
...................................................................................................................................................................................................................................................................ACACACCACA--CTCTACAC-----TC-------C...............................................................................................2111.001100000
.............................................................................................GCAGCTATTCCC-TAGGGCAGTT.................................................................................................................................................................................................................................................................................2211.001000010
...............................................................CTAAGAACTCG---GATGCCTAGG------GC......................................................................................................................................................................................................................................................................................................2311.001000010
droBip1
TAAATGGGCTGACCAACCGATTGGACCAAATGGAAATCA---AGGCCAAAAAGGT------AACTAAGAACACG---GATGCCTAGG------GCGTTATTCC--CT------GTT-A--GTGTGT-------------------------CCACAGCCGA---GGGATT-------CTT--CCAGT-CGCCTGCCAAGCAGTC-CTCC-T------TCAAAA---------------------CAGTACACACGATATACAC-----A--CTCTACAC-----TC-------CACATCCAAT-A-ATATCTAT--CTATTCCT--------------ATGTGGTGGTTAT-----ACTTTTG--C--------AGAG---T-ATGATASizeHit CountTotal NormTotal
No Reads
dp5
TAAACGGGCTGACCAACAGCCTGGATCACATGGATATATCATCAGTGAAAAAGGTACGAGCAACTGGCGGGGAG---GATGGCCAGAGGTAGCCGAG---------------------TAGTGCGTCCCCTCCTTCCATT------------------CCA---AGGATT---------------GT-CTCCTGCCAAGCAGC-TGTCCCACCA---GAA---ACAGAAACACCAAAACATACACAG--GACACAAAGGATAC-----A--CTCTACAC-----TCTACCCAGCAGCTCCTGT-ATCTCTCTCT--CTC--ACT--ATCTCCCC------------------------------------------------------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................CTACAC-----TCTACCCAGCAGCT...........................................................................................2011.0010100000000
..........GACCAACAGCCTGGATCACATGGAT..................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
....................................................................................................................................................................................................................................AACACCAAAACATACACAG--GAC.........................................................................................................................................2211.0010100000000
.......................................CATCAGTGAAAAAGGTACGAGC........................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................................A---GAA---ACAGAAACACCAAAACA.....................................................................................................................................................2111.0010100000000
droPer2
TAAACGGGCTGACCAACAGCCTGGATCACATGGAGATATCATCAGTGAAAAAGGTACGAGCAACTGGCGGGGAG---GATGGCTAGAGGTAGCCGAG---------------------TAGTGCGTCCCCTCCTTCCATT------------------CCA---AGGATT---------------GT-CTCCTGACAAGCAGC-TGTCCCACCA---GAA---ACAGAAACACCAAAACATACACAG--GACACAAAGGATAC-----A--CTCTACAC-----TCTACCCAGCAGCTCC-----TGTATCTCTCTCTC--ACT--ATCTCCCC------------------------------------------------------TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................AAAGGATAC-----A--CTCTACAC-----T........................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................CTCTCTC--ACT--ATCTCCCC------------------------------------------------------.1811.001010000
...............ACAGCCTGGATCACATGGAGAT................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droWil2
TAAATGGCATCACAAATAGTATGGAACACGTTGAAAATT---CAGTAAAAAAGGT------AACTAGTGAGACT---------TAGG------CCCTTTTTTTTTTC------AT------------------------TTAAGATTGGGAAATTATTAGCAAGTGAAAA------GATTAAAGATTTCTTTACCAAAGCAGT-TC-AA-G------CCATAC---------------------AAATACAAACAATAAACAC-----A--TTGAACAC-----TA--TCC--AAACTCCTTT-CTCTCTCTCC--CTC--TCT--CTCTCTCT------------------------------------------------------TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............ATAGTATGGAACACGTTGAAAA................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...ATGGCATCACAAATAGTATGGA............................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..................................................................................................................T------------------------TTAAGATTGGGAAATTATT.......................................................................................................................................................................................................................................2011.00100100
droVir3
TAAATGGCCTTACCAACAGTTTGGATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....TGGCCTTACCAACAGTTTGG.............................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TAAATGGCCTCACTAACAGTGTGGAGCATCTGAAAATGT---CAATGGAAAAGGT------AACTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........CACTAACAGTGTGGAGCA.........................................................................................................................................................................................................................................................................................................................................................................1811.001000010
droGri2
GT----------------------------------------------------------------------------------------------------------------------GTGTGT-------------------------CTGTGGCCACAATAGATAG-------TCT--CGAAG-CGCTGCAGATACTCTC---TT-A------GATGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:44 PM