ID:dsi_15131 |
Coordinate:3l:16487112-16487298 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -8.1 | -7.7 | -7.1 |
 |
 |
 |
intergenic
No Repeatable elements found
|
AGAGGGACAACCCGCAAGCAGTGGATACCAACGACAGCAACAAATCCAATGTAAGTGCGTAGGACAGACACCTGGCATCATTTCTCACCCACTAATTTCGACCACAACCTGATACAACAACCGCACACACCACTGCCGCATAACAAACTGTCCTAACTGCTTTACCTCTTTGCTTTTCATATTGCTACTGCTCCCACATTCCGCTTGCTTTTCCGCTTCACCTTCCACCCGAAAAAGCTGCAAACCTCTACCGCAGCAGAGGAGCAATCAAGGGGTGGTTCACCTGG
**************************************************....((((.((((.......))))))))..........................................................................*************************************************************************************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
M024 male body |
GSM343915 embryo |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................ACTGCCGCATAACAAACTGTC....................................................................................................................................... | 21 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 |
| ...............................................AATGTAAGTGCGTAGGACAGACACCT...................................................................................................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ......................................................................................................CAGAGCCTGATACAACAACCC.................................................................................................................................................................... | 21 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ..................................................GTAAGTGCGTAGGACAGACACCTGG.................................................................................................................................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 |
| .......................................................................CTGCCATCGTTTCTCACC...................................................................................................................................................................................................... | 18 | 2 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 |
| ...................................................TAAGTGCGTAAGACAGA........................................................................................................................................................................................................................... | 17 | 1 | 12 | 0.08 | 1 | 0 | 0 | 0 | 1 |
| .....................................................AGTGCGTAGGAGAGAAA......................................................................................................................................................................................................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
| ............................................................................................GATTTTCGACCGCAACCTG................................................................................................................................................................................ | 19 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 |
| .................................................AATAAGTGCGTATGACAGA........................................................................................................................................................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
|
TCTCCCTGTTGGGCGTTCGTCACCTATGGTTGCTGTCGTTGTTTAGGTTACATTCACGCATCCTGTCTGTGGACCGTAGTAAAGAGTGGGTGATTAAAGCTGGTGTTGGACTATGTTGTTGGCGTGTGTGGTGACGGCGTATTGTTTGACAGGATTGACGAAATGGAGAAACGAAAAGTATAACGATGACGAGGGTGTAAGGCGAACGAAAAGGCGAAGTGGAAGGTGGGCTTTTTCGACGTTTGGAGATGGCGTCGTCTCCTCGTTAGTTCCCCACCAAGTGGACC
***************************************************************************************************************************************....((((.((((.......))))))))..........................................................................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................AGATTGGGTGATTAAAGCTGGTT...................................................................................................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................AAGTGATGTTGGACTATGTTGT........................................................................................................................................................................ | 22 | 3 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 |
| ............................................................................TAGTCAAGAGTGGGTG................................................................................................................................................................................................... | 16 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...........................GGTTGCTGGCGTTGTT.................................................................................................................................................................................................................................................... | 16 | 1 | 14 | 0.14 | 2 | 0 | 0 | 2 | 0 | 0 |
| ...................................................................................................................................................................................................................AGGCGAATTGGAAGGTC........................................................... | 17 | 2 | 9 | 0.11 | 1 | 0 | 0 | 0 | 1 | 0 |
| .........................ATGGTTGCTGGCGTTGTTG................................................................................................................................................................................................................................................... | 19 | 2 | 9 | 0.11 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................................................................................................................................................................................CGTCTCTTCGTTAGGTC............... | 17 | 2 | 11 | 0.09 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................................................................................................GTGTTGCTTGACATGATTG.................................................................................................................................. | 19 | 3 | 12 | 0.08 | 1 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................................................GGCTTTTTCGACGGTT........................................... | 16 | 1 | 15 | 0.07 | 1 | 0 | 0 | 1 | 0 | 0 |
| .....ATGTTGGGCGTTGGTCTCC....................................................................................................................................................................................................................................................................... | 19 | 3 | 18 | 0.06 | 1 | 0 | 0 | 0 | 0 | 1 |
| ..............................................GTTACATACACGCATCG................................................................................................................................................................................................................................ | 17 | 2 | 19 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 |
| .................................................................................................AGCTGGTTATGGACTA.............................................................................................................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
Generated: 04/24/2015 at 04:58 AM