ID:

dsi_15107

 Coordinate:

2l:3484619-3484768 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2l_3484399_3484618_-]; CDS [2l_3484399_3484618_-]; intron [2l_3484619_3492675_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGAACGGGAAATCTCAAGGAGCAATCCAGTGGTGGACAAGAGGAGGAAGCAGAGAAGGGTAAGGGGTGGAAGGATTTCGATGTTTTAAAAAAAATCAAATCAGGCAGGATAGATAGGCATAGTATCTTTTATTTCGATAGGATAGGACAGAATTATGATTATACATATATACCCAATTAATGTTAATACTTTCTCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACCCTGTCG
**************************************************............((((.((((((((((.(((............)))))))).((....((..(((..((((((.((((((..(((....)))..))).)))))))))..)))..)).....))...............))))).))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 O001
Testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M053
female body
................................TGGACAAGAGGAGGAAGCAGAGAAGGA............................................................................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................TCAAATCAGGTAGGAT............................................................................................................................................ 16 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................TACTTTCTCCCCAGATGG.............................................. 18 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................CTCAAATCAGGCAGG.............................................................................................................................................. 15 1 5 0.60 3 2 0 0 1 0 0 0
..........................................................................TGTCGATGTCTTAAAAAAAA............................................................................................................................................................ 20 2 3 0.33 1 0 0 0 1 0 0 0
..............................................................................................TCAAATCAGGTAGGA............................................................................................................................................. 15 1 9 0.22 2 1 0 0 1 0 0 0
......................................................................................................................................................................................................................GTTTCCCGTGAGGGAAAG.................. 18 2 8 0.13 1 0 0 0 0 1 0 0
.......................................................................................................................................GATGGGATAGAACAGCATTA............................................................................................... 20 3 9 0.11 1 0 0 0 0 0 1 0
...........................................................................TTCGATGTTCTAAAAA............................................................................................................................................................... 16 1 9 0.11 1 1 0 0 0 0 0 0
............................................................................................TCTCAAATCAGGCAGGA............................................................................................................................................. 17 2 10 0.10 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................CCGCGAGGGCAAGCAAATCT........... 20 3 14 0.07 1 0 0 0 0 0 0 1
.......................................GATGTGGAAGCAGCGAAGGG............................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 1 0 0

Anti-sense strand reads

TCTTGCCCTTTAGAGTTCCTCGTTAGGTCACCACCTGTTCTCCTCCTTCGTCTCTTCCCATTCCCCACCTTCCTAAAGCTACAAAATTTTTTTTAGTTTAGTCCGTCCTATCTATCCGTATCATAGAAAATAAAGCTATCCTATCCTGTCTTAATACTAATATGTATATATGGGTTAATTACAATTATGAAAGAGGGGTCTACCTGCGCACCTCCAAAGGGCGCTCCCGTTCATGGAGAGGTGGGACAGC
**************************************************............((((.((((((((((.(((............)))))))).((....((..(((..((((((.((((((..(((....)))..))).)))))))))..)))..)).....))...............))))).))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
.............................ACCACCTGATCTCCT.............................................................................................................................................................................................................. 15 1 7 0.14 1 0 1 0
.............................ACCACCTGCTCGCCTCCT........................................................................................................................................................................................................... 18 2 9 0.11 1 1 0 0
..................................................................................AAAATTTTTTTTAGTTG....................................................................................................................................................... 17 1 11 0.09 1 1 0 0
...........................................................................................................................................CCTCTCCTGCCTTAATA.............................................................................................. 17 2 14 0.07 1 0 0 1
..........................................................................................................CCTATCTATCCCTGTCA............................................................................................................................... 17 2 19 0.05 1 0 0 1
.............................ACCACCTGATCTCCTT............................................................................................................................................................................................................. 16 2 20 0.05 1 0 1 0
........................................................................................................................................................................................................................................ATAGAGAGCTGGGACA.. 16 2 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:3484569-3484818 - dsi_15107 AGAACGGGAAATCTCAAGGAGCAATCCAGTGGTGGACA---AGAGG---AGGAAGCAG------AGAAGGGTAAGGGG-------------------------------TGGAAG-------------GAT----------------------------------------------------------------------------------------------TTCGA------TGTTTT----------------------------------------------------------------AAAA------------------------------AAAATCAAAT-------------------------CAGGCAGGATAGATAGGCATAGTA-TCTTTTATTTCGATAGGATAGGAC-----------------------------------------------------------------------------------AGAATTATGATTA----------------------------------------------------------------TACAT------------------------------------------------------ATATACC-------------CA-ATTAA----------TGTT------AA-TACTTTCTCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACCCTGTCG
droSec2 scaffold_5:1727192-1727437 - AGGACAGGAAATCTCAAGGAGCAATCCAGCGGTGGACA---GGAGG---AGGAAGCAG------AGAAGGGTAAGGGG-------------------------------TGGAAG-------------GAT----------------------------------------------------------------------------------------------TTCGA------TGTTTT----------------------------------------------------------------AAAA------------------------------AAAATCAAAT-------------------------CAGTCAGGATAGATAGGCATAGTA-TCTTTTATTTCAATAGGATTGGAC-----------------------------------------------------------------------------------AGAATTATGATT--------------------------------------------------------------------AT------------------------------------------------------ATATACC-------------CA-ATTAA----------TGTT------AA-TATTTTCTCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACATTGTCG
dm3 chr2L:3626167-3626394 - AGGACGGGAAATCTCAAGGAGCAATCCAGCGGTGGGCA---GGAGG---AGGAAGCAG------AGAAGGGTAAGGGG-------------------------------TGGAAG-------------GAT----------------------------------------------------------------------------------------------TTCTA------TGTTTT----------------------------------------------------------------A---------------------------------------------------------------------AGTCAGGA----TAGGCATAGTA-GCTTTTATATCAATAGGATAGGAC-----------------------------------------------------------------------------------AGAATTATGATT--------------------------------------------------------------------AT------------------------------------------------------GATTACC-------------CA-ATTAA----------TTTT------AA-TATATTTTCTCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACATTGTCG
droEre2 scaffold_4929:3664806-3665044 - AGGACGGGAAATCTCAAGGAGCAATCCAGTGGTGGCCA---GGAGG---AGGAAGCAG------AGCAGGGTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCTAGGATTTATATTTGTCAGTTGTAGTCAGGA----TGGGCATAGTAGTCTTTGATTGCAGTAGGATAGGGTTTATTATCGAAACAG-------------------------------------------------------------------------------------------------------------------------------------------------TTTAG------------------------------------------------------AAGCATC-------------CA-ATTAA----------TGTT------CC-CATTTTCCCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACCCTGTCG
droYak3 2L:3619697-3619935 - AGGACGGGCAATCTCAAGGAGCAGTCCAGCGGTGGCCA---GGAGG---AGGAGGCAG------AGCAGGGTAAGGGT-------------------------------TGGAAG-------------GGC----------------------------------------------------------------------------------------------AT------------TTT-------------------------------------A--------------------------TACA------------------------------GGA-----ACCAT--------------------------TAGGATTTATATTTCTAG---TCTTTTATTACAGTAGGATAGGATTTACTATCGAAACAT-------------------------------------------------------------------------------------------------------------------------------------------------TTAAG------------------------------------------------------ATTTACT-------------TA-ATGAA----------GATT------TA-TATTTCCTCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACGCTGTCG
droEug1 scf7180000409554:2457964-2458197 + AGGACGGGGAATCTCAAAGAGCAATCGGGTGGGGGGCA---GGAGG---AAGAAGCAG------ACAAGGGTAAGAAT-------------------------------TGGTAG-------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTAGCCCATATAAGATTAGAT--CTAAG--------------------------------------------------C-------------------------------------------ACTATTATAG-------------------------------------------------------------------------------AGGATATAGGGTGGAACTAAAACCTAAACCT----------------------------TTCTT------------------------------------------------------ATTCAGC-------------TT-CGTAA----------TTGC------AT-AACTTTCTCCACAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACCCTCTCG
droBia1 scf7180000302408:1925142-1925460 - AGGACCGGCAATCTCAAGGAGCAGTCGAGTGGGGGGCA---GGAGG---AAGAGGCAG------AGAAGGGTAAGGGT-------------------------------TGGGTGATTGGAATGGAAGGGC----------------------------------------------------------------------------------------------CTCTAAGGAGATATTCCTAAGAGATTATAATAAAAATACTTTTATTCTTTGTTTATTGATCATGATCCTGATACTATTATTCAAA------------------------------AATAT----------------------------------------------------------------------------CAT-----------------------------------------------------------------------------------AGAATTACGACTAGGTCTGGCAAATAAGGGGGTACTGCAATCCAAATCC----------------------------TTCAT------------------------------------------------------AAGCACC-------------CT-ATTAA----------CTTG------GT-TATTTTCTCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCGACCCTTTCG
droTak1 scf7180000415399:612694-612779 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTACC-------------CT-ATTAA----------TTTC------ACTATTTTCCTTTCCAGATGGACGCGTCGAGGTTTCCCGCGAGGGCAAATACCTTTCGACCCTTTCG
droEle1 scf7180000490728:337915-338081 - AGGACTGGGAACCTCAAGGAGCAGTCCTCTGGGGGACA---GGACGAAGAGGAACCAG------AGAAGGGTAAGGGT-------------------------------TGTGTGGTGGATTATGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------AAA---------------------------------------------------------------------------------------------TTCATTAGAAGA----------------------------------ATTGAATCTTTGAATCTATATACCTTGAATCGTTATTT----------------------------------------------------------------TAAAT------------------------------------------------------ATAAACC-------------TG-TTTAA----------TTTT------AA-----------------------------------------------------------------
droRho1 scf7180000779523:331092-331282 - GGTATTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGATTAG---AAATGAGAAAGGATAACAAAA--------------------------------------------------C-------------------------------------------ATTATTGTGATT----------------------------------AATGGATCTTCTAAGTTA-------------------------GG------AGGGTGTACTAGAGTTCAAAACCCTTT------------------------TCCAT------------------------------------------------------GTTTACC-------------TT-ATTAA----------TTTT------TAAAATTTTCTCCACAGATGGCCGCGTGGAGGTTTCCCGCGAGGGCAAATACCTCTCGACCCTTTCG
droFic1 scf7180000453924:1613104-1613247 - TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTTAAATGGAATAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGAATTAGTACTTAGTTAGCCTCCATCGT-----------------------ACTCCCC-------------CG-ACTAA----------TTTGATTTATTC-TCTTTTCTTCCCAGATGGCCGCGTGGAGGTGTCCCGCGAGGGCAAGTACCTCTCGACCCTCTCG
droKik1 scf7180000302270:989790-990176 + CGTACTGGGAATCTCAAGGAGCAGTCCAGTGGGGGGCA---GGAGGAAGAGGAAGCGGATACTAAGAAGGGTAAGGGT-------------------------------TAGGG--AGGAGAGGGAAGG-AGCTTGTTTTGAAATGA--------------GTAGAGATCTTTAGGTATCTTGAAGATACTTATTGTAAAATGGGAATTTCAGATTCTTACGTATCTCTAAG---ATACTCTTA----------------------------------------------------------------AATCTTTTAG---AAAA--------TCAAGAAAA--------------------------------------------------A-------------------------------------------ACTATTTAGATTATATTTAACATAGAAAATATATTAACTAAGCTTAAATGGATCTTTAA-----------------------------------------------------TATAAATATTTC------------------------TTAAT--------GTTTTCTAGCTAATCCCACTAAT-----------------------AAACCCC-------------C---------------------------TC-TTTCTCCCTTCCAGATGGCCGCGTTGAGGTATCCCGCGAGGGCAAATACCTTTCAACCCTTTCG
droAna3 scaffold_12916:5680279-5680357 - AGGACGGGGAATCTCAAGGATCAGTCCAGTGGGGCGCAAGAGGAGGAGGAGGAAGCGG------AAAAGGGTAAGGAT-------------------------------CGGTGG-------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396568:1156979-1157285 + AGGACGGGGAATCTCAAGGATCAGTCCGGTGGGGCGCA---GGAGGAGGAGGAAGCGG------AAAAGGGTAAGAAT-------------------------------TAGGA--TCGAGTAGGAGGGGT----------------------------------------------------------------------------------------------TTCAA------TATTTTTCAGG--------------TATTTTTTTGCTTTAGTTTT-------------------------A---------------------------------------------------------------------AGTC------------------------------------------------------------------------------------------------------------------------------------------------TGATTT-------------AAA---------------ATCAA-------AACAAAAACTA-----GATGAA-----ACTGACTTAATCTTAATCTTTAAACTAGTTGATAAGACTATGAGCTTAATCATTCCAA--TTT----AAAA----CCAAA-TCTAACTTT-TAAAATCCCCATTTCAGATGGCCGCGTTGAAGTCTCTCGCGAGGGCAAGTACCTCTCAACCCTGTCG
dp5 4_group3:5108337-5108618 + dps_1559 CGCACAGGGAATCTCAAGGAGCAGTCGAGTGCCGGGCA---AGAGG---AGGAACCAG------CGAAGGGTAAGGGTAACAGTTACAGTTACAGTTACAGGAAGATGGTGCAC------------AG-ACGATCATTTTGGGGTACATAAAGTAATGATTGCGGGGATCTATTGG----------------------------GGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------TATTGATCTTAAGAATGGGA-----------TAGATTATTTTCTTT-------------T----------------------------------ATTCTT---CTAAC-AATTTCCCATCT---------C-CAATCTCCCTTTCCAGATGGACGCGTGGAGGTCTCACGCGAGGGCAAATACCTCTCGACCCTCTCC
droPer2 scaffold_1:6599645-6599926 + CGCACAGGGAATCTCAAGGAGCAGTCGAGTGCCGGGCA---AGAGG---AGGAACCAG------CGAAGGGTAAGGGTAACAGTTGCAGTTACAGTTACAGGAAGATGGTGCAC------------AG-ACGATCATTTTGGGGTACATAAAGTAATGATTGTGGGGATCTATTGG----------------------------GGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------TATTGATCTTAAGAATGGGA-----------TAGATTATTTTCTTT-------------T----------------------------------ATTCTT---CTAAC-AATTTCCCATCT---------C-CAATCTCCCTTTCCAGATGGACGCGTGGAGGTCTCACGCGAGGGCAAATACCTCTCGACCCTCTCC
droWil2 scf2_1100000004521:9533721-9533827 + CACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAACTTTATGAACAAAA---------ACTAAATTACTTCTGT------------------------------------------------------------------------------CT------CT-TCTTTTACTTTCAGATGGCCGCGTTGAGGTGTCACGCGAAGGCAAATATCTCTCAACCCTTTCG
droVir3 scaffold_12963:15125444-15125499 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCAGATGGACGCGTGGAGGTCTCACGCGAGGGCAAATATCTTTCGACGCTCTCC
droMoj3 scaffold_6500:18103187-18103239 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATGGACGCGTGGAGGTGTCACGCGAGGGCAAGTACCTGTCGACGCTCTCC
droGri2 scaffold_15126:4272232-4272319 - TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCAATCAAC--TTC----AAAC---------------------G-CGCCTTTGTTTCAGATGGACGCGTCGAGGTCTCACGCGAGGGTAAATATCTATCCACACTCTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGAACGGGAAATCTCAAGGAGCAATCCAGTGGTGGACA---AGAGG---AGGAAGCAG------AGAAGGGTAAGGGG-------------------------------TGGAAG-------------GAT----------------------------------------------------------------------------------------------TTCGA------TGTTTT----------------------------------------------------------------AAAA------------------------------AAAATCAAAT-------------------------CAGGCAGGATAGATAGGCATAGTA-TCTTTTATTTCGATAGGATAGGAC-----------------------------------------------------------------------------------AGAATTATGATTA----------------------------------------------------------------TACAT------------------------------------------------------ATATACC-------------CA-ATTAA----------TGTT------AA-TACTTTCTCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACCCTGTCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................TGGACA---AGAGG---AGGAAGCAG------AGAAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTCTCCCCAGATGG..............................................1811.00100001000000000000
droSec2
AGGACAGGAAATCTCAAGGAGCAATCCAGCGGTGGACA---GGAGG---AGGAAGCAG------AGAAGGGTAAGGGG-------------------------------TGGAAG-------------GAT----------------------------------------------------------------------------------------------TTCGA------TGTTTT----------------------------------------------------------------AAAA------------------------------AAAATCAAAT-------------------------CAGTCAGGATAGATAGGCATAGTA-TCTTTTATTTCAATAGGATTGGAC-----------------------------------------------------------------------------------AGAATTATGATT--------------------------------------------------------------------AT------------------------------------------------------ATATACC-------------CA-ATTAA----------TGTT------AA-TATTTTCTCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACATTGTCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----------TGTT------AA-TATTTTCTCCCCAA..................................................2311.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCCCGCGAGGGCAAGTA................2111.0010010
...........................................................................GGG-------------------------------TGGAAG-------------GAT----------------------------------------------------------------------------------------------TTCGA------TGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACGCGTGGAGGTTTCCC.............................2211.0010010
..................................................................AAGGGTAAGGGG-------------------------------TGGAAG-------------GA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACGCGTGGAGGTTTCCCGCGAGGGC.....................2911.0010010
dm3
AGGACGGGAAATCTCAAGGAGCAATCCAGCGGTGGGCA---GGAGG---AGGAAGCAG------AGAAGGGTAAGGGG-------------------------------TGGAAG-------------GAT----------------------------------------------------------------------------------------------TTCTA------TGTTTT----------------------------------------------------------------A---------------------------------------------------------------------AGTCAGGA----TAGGCATAGTA-GCTTTTATATCAATAGGATAGGAC-----------------------------------------------------------------------------------AGAATTATGATT--------------------------------------------------------------------AT------------------------------------------------------GATTACC-------------CA-ATTAA----------TTTT------AA-TATATTTTCTCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACATTGTCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
AGGACGGGAAATCTCAAGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020300000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................A---GGAGG---AGGAAGCAG------AGAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACGCGTGGAGGTTTCCCGCGA.........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACGCGTGGAGGTTTCCC.............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................AGG---AGGAAGCAG------AGAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000
...............................GTGGGCA---GGAGG---AGGAAGCAG------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
AGGACGGGAAATCTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCGCGAGGGCAAGTACCTCTCCACA......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGGAAATCTCAAGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CAAGGAGCAATCCAGCGGTGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------CA-ATTAA----------TTTT------AA-TATATTTTCTCCAGA.................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGGAAATCTCAAGGAGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGCGAGGGCAAGTACCTCTCCA........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGGGCA---GGAGG---AGGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------AA-TATATTTTCTCCAGATC...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATCCAGCGGTGGGCA---GGAGG---AG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..GACGGGAAATCTCAAGGAGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GA----TAGGCATAGTA-GCTTTT................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------AGTCAGGA----TAGGCATAGTA-G.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA----------TTTT------AA-TATATTTTCTCCAG..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGACGCGTGGAGGTTTCC..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCCCGCGAGGGCAAGT.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAA----------TTTT------AA-TATATTTTCTCCAG..................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGGAAATCTCAAGGAGCAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCTCAAGGAGCAATCCAGCGGTGGGCA---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------CA-ATTAA----------TTTT------AA-TATATTTTCTCCAG..................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGTGGAGGTTTCCCGC...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGGATAGGAC-----------------------------------------------------------------------------------AGAATT.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGCGTGGAGGTTTCCCGCGAA........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCGTGGAGGTTTCCCGCGAGG.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGCGGTGGGCA---GGAGG---AGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----------TTTT------AA-TATATTTTCTCCAG..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GACGGGAAATCTCAAGGAGCAATCCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCCAGCGGTGGGCA---GGAGG---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................AGAAGGGTAAGGGG-------------------------------TGGAAG-------------G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCGCGAGGGCAAGTACCTCTC..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
............CTCAAGGAGCAATCCAGCGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACGCGTGGAGGTTTCCCGCGAA........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCAAGGAGCAATCCAGCGGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCAAGTACCTCTCCAC.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGGAAATCTCAAGGAGCAATCCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGTTTCCCGCGAGGGCA....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........AATCTCAAGGAGCAATCCAGCGGTGGGCA---T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGGACGGGAAATCTCAAGGAGCAATCCAGTGGTGGCCA---GGAGG---AGGAAGCAG------AGCAGGGTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCTAGGATTTATATTTGTCAGTTGTAGTCAGGA----TGGGCATAGTAGTCTTTGATTGCAGTAGGATAGGGTTTATTATCGAAACAG-------------------------------------------------------------------------------------------------------------------------------------------------TTTAG------------------------------------------------------AAGCATC-------------CA-ATTAA----------TGTT------CC-CATTTTCCCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACCCTGTCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACGCGTGGAGGTT.................................1811.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGAGGGCAAGTACCTCTCCACCCTGTC.2911.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTACCTCTCCACCCTGT..1911.0010000010
droYak3
AGGACGGGCAATCTCAAGGAGCAGTCCAGCGGTGGCCA---GGAGG---AGGAGGCAG------AGCAGGGTAAGGGT-------------------------------TGGAAG-------------GGC----------------------------------------------------------------------------------------------AT------------TTT-------------------------------------A--------------------------TACA------------------------------GGA-----ACCAT--------------------------TAGGATTTATATTTCTAG---TCTTTTATTACAGTAGGATAGGATTTACTATCGAAACAT-------------------------------------------------------------------------------------------------------------------------------------------------TTAAG------------------------------------------------------ATTTACT-------------TA-ATGAA----------GATT------TA-TATTTCCTCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACGCTGTCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTTTCCCGCGAGGGC.....................1912.00201100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGACGCGTGGAGGTT.................................1911.00100000010000
droEug1
AGGACGGGGAATCTCAAAGAGCAATCGGGTGGGGGGCA---GGAGG---AAGAAGCAG------ACAAGGGTAAGAAT-------------------------------TGGTAG-------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATTAGCCCATATAAGATTAGAT--CTAAG--------------------------------------------------C-------------------------------------------ACTATTATAG-------------------------------------------------------------------------------AGGATATAGGGTGGAACTAAAACCTAAACCT----------------------------TTCTT------------------------------------------------------ATTCAGC-------------TT-CGTAA----------TTGC------AT-AACTTTCTCCACAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCCACCCTCTCGSizeHit CountTotal NormTotal
No Reads
droBia1
AGGACCGGCAATCTCAAGGAGCAGTCGAGTGGGGGGCA---GGAGG---AAGAGGCAG------AGAAGGGTAAGGGT-------------------------------TGGGTGATTGGAATGGAAGGGC----------------------------------------------------------------------------------------------CTCTAAGGAGATATTCCTAAGAGATTATAATAAAAATACTTTTATTCTTTGTTTATTGATCATGATCCTGATACTATTATTCAAA------------------------------AATAT----------------------------------------------------------------------------CAT-----------------------------------------------------------------------------------AGAATTACGACTAGGTCTGGCAAATAAGGGGGTACTGCAATCCAAATCC----------------------------TTCAT------------------------------------------------------AAGCACC-------------CT-ATTAA----------CTTG------GT-TATTTTCTCCCCAGATGGACGCGTGGAGGTTTCCCGCGAGGGCAAGTACCTCTCGACCCTTTCGSizeHit CountTotal NormTotal
No Reads
droTak1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTACC-------------CT-ATTAA----------TTTC------ACTATTTTCCTTTCCAGATGGACGCGTCGAGGTTTCCCGCGAGGGCAAATACCTTTCGACCCTTTCGSizeHit CountTotal NormTotal
No Reads
droEle1
AGGACTGGGAACCTCAAGGAGCAGTCCTCTGGGGGACA---GGACGAAGAGGAACCAG------AGAAGGGTAAGGGT-------------------------------TGTGTGGTGGATTATGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------AAA---------------------------------------------------------------------------------------------TTCATTAGAAGA----------------------------------ATTGAATCTTTGAATCTATATACCTTGAATCGTTATTT----------------------------------------------------------------TAAAT------------------------------------------------------ATAAACC-------------TG-TTTAA----------TTTT------AA-----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGTATTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGATTAG---AAATGAGAAAGGATAACAAAA--------------------------------------------------C-------------------------------------------ATTATTGTGATT----------------------------------AATGGATCTTCTAAGTTA-------------------------GG------AGGGTGTACTAGAGTTCAAAACCCTTT------------------------TCCAT------------------------------------------------------GTTTACC-------------TT-ATTAA----------TTTT------TAAAATTTTCTCCACAGATGGCCGCGTGGAGGTTTCCCGCGAGGGCAAATACCTCTCGACCCTTTCGSizeHit CountTotal NormTotal
No Reads
droFic1
TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTTAAATGGAATAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGAATTAGTACTTAGTTAGCCTCCATCGT-----------------------ACTCCCC-------------CG-ACTAA----------TTTGATTTATTC-TCTTTTCTTCCCAGATGGCCGCGTGGAGGTGTCCCGCGAGGGCAAGTACCTCTCGACCCTCTCGSizeHit CountTotal NormTotal
No Reads
droKik1
CGTACTGGGAATCTCAAGGAGCAGTCCAGTGGGGGGCA---GGAGGAAGAGGAAGCGGATACTAAGAAGGGTAAGGGT-------------------------------TAGGG--AGGAGAGGGAAGG-AGCTTGTTTTGAAATGA--------------GTAGAGATCTTTAGGTATCTTGAAGATACTTATTGTAAAATGGGAATTTCAGATTCTTACGTATCTCTAAG---ATACTCTTA----------------------------------------------------------------AATCTTTTAG---AAAA--------TCAAGAAAA--------------------------------------------------A-------------------------------------------ACTATTTAGATTATATTTAACATAGAAAATATATTAACTAAGCTTAAATGGATCTTTAA-----------------------------------------------------TATAAATATTTC------------------------TTAAT--------GTTTTCTAGCTAATCCCACTAAT-----------------------AAACCCC-------------C---------------------------TC-TTTCTCCCTTCCAGATGGCCGCGTTGAGGTATCCCGCGAGGGCAAATACCTTTCAACCCTTTCGSizeHit CountTotal NormTotal
No Reads
droAna3
AGGACGGGGAATCTCAAGGATCAGTCCAGTGGGGCGCAAGAGGAGGAGGAGGAAGCGG------AAAAGGGTAAGGAT-------------------------------CGGTGG-------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................AAGAGGAGGAGGAGGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.....................................AAGAGGAGGAGGAGGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.333200010
droBip1
AGGACGGGGAATCTCAAGGATCAGTCCGGTGGGGCGCA---GGAGGAGGAGGAAGCGG------AAAAGGGTAAGAAT-------------------------------TAGGA--TCGAGTAGGAGGGGT----------------------------------------------------------------------------------------------TTCAA------TATTTTTCAGG--------------TATTTTTTTGCTTTAGTTTT-------------------------A---------------------------------------------------------------------AGTC------------------------------------------------------------------------------------------------------------------------------------------------TGATTT-------------AAA---------------ATCAA-------AACAAAAACTA-----GATGAA-----ACTGACTTAATCTTAATCTTTAAACTAGTTGATAAGACTATGAGCTTAATCATTCCAA--TTT----AAAA----CCAAA-TCTAACTTT-TAAAATCCCCATTTCAGATGGCCGCGTTGAAGTCTCTCGCGAGGGCAAGTACCTCTCAACCCTGTCGSizeHit CountTotal NormTotal
No Reads
dp5
CGCACAGGGAATCTCAAGGAGCAGTCGAGTGCCGGGCA---AGAGG---AGGAACCAG------CGAAGGGTAAGGGTAACAGTTACAGTTACAGTTACAGGAAGATGGTGCAC------------AG-ACGATCATTTTGGGGTACATAAAGTAATGATTGCGGGGATCTATTGG----------------------------GGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------TATTGATCTTAAGAATGGGA-----------TAGATTATTTTCTTT-------------T----------------------------------ATTCTT---CTAAC-AATTTCCCATCT---------C-CAATCTCCCTTTCCAGATGGACGCGTGGAGGTCTCACGCGAGGGCAAATACCTCTCGACCCTCTCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGTCTCACGCGAGGGCAA...................2211.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAATACCTCTCGACCCT....2011.0010100000000
droPer2
CGCACAGGGAATCTCAAGGAGCAGTCGAGTGCCGGGCA---AGAGG---AGGAACCAG------CGAAGGGTAAGGGTAACAGTTGCAGTTACAGTTACAGGAAGATGGTGCAC------------AG-ACGATCATTTTGGGGTACATAAAGTAATGATTGTGGGGATCTATTGG----------------------------GGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------TATTGATCTTAAGAATGGGA-----------TAGATTATTTTCTTT-------------T----------------------------------ATTCTT---CTAAC-AATTTCCCATCT---------C-CAATCTCCCTTTCCAGATGGACGCGTGGAGGTCTCACGCGAGGGCAAATACCTCTCGACCCTCTCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGACGCGTGGAGGTCTCAC.............................2311.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACGCGTGGAGGTCTC...............................2011.001000001
.................................................................GAAGGGTAAGGGTAACAGTTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droWil2
CACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAACTTTATGAACAAAA---------ACTAAATTACTTCTGT------------------------------------------------------------------------------CT------CT-TCTTTTACTTTCAGATGGCCGCGTTGAGGTGTCACGCGAAGGCAAATATCTCTCAACCCTTTCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCCGCGTTGAGGTGTCACGC...........................2411.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAGGTGTCACGCGAAGGCAA...................2411.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGGTGTCACGCGAAGGC.....................2111.00100100
droVir3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCAGATGGACGCGTGGAGGTCTCACGCGAGGGCAAATATCTTTCGACGCTCTCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGCGAGGGCAAATAT...............1811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGATGGACGCGTGGAGGTCT................................2211.001000001000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACGCGTGGAGGTC.................................1811.001000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGGCAAATATCTTTCGAC.......2111.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGGAGGTCTCACGCGAGGGC.....................2411.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCTCACGCGAGGGCA....................1911.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATGGACGCGTGGAGGTGTCACGCGAGGGCAAGTACCTGTCGACGCTCTCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGAGGTGTCACGCGA.........................1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACGCGTGGAGGTGTCACGC...........................2411.001000001
droGri2
TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCAATCAAC--TTC----AAAC---------------------G-CGCCTTTGTTTCAGATGGACGCGTCGAGGTCTCACGCGAGGGTAAATATCTATCCACACTCTCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGACGCGTCGAGGTCT................................2011.00110
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGTCGAGGTCTCACGCGAGGGTA....................2611.00110

Generated: 05/19/2015 at 10:59 AM