ID:

dsi_15097

 Coordinate:

3l:14399819-14399968 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.5 -19.42 -19.4

Flybase annnotation

five_prime_UTR [3l_14399969_14400086_-]; exon [3l_14399969_14400086_-]; intron [3l_14399459_14399968_-]; exon [3l_14399608_14400086_-]; five_prime_UTR [3l_14399608_14400086_-]

No Repeatable elements found

mature
  1. 2l:2079131-2079145 +
  2. 2l:14105283-14105297 -
  3. 2l:19392782-19392796 +
  4. 2l:22778418-22778432 -
  5. 2r:50228-50242 +
  6. 3l:6714655-6714669 -
  7. 3l:11001002-11001016 -
  8. dsi_15097  3l:14399832-14399846 -
  9. 3r:12496575-12496589 -
  10. 4:442009-442023 -
  11. x:3169061-3169075 +
  12. x:4567801-4567815 +
  13. x:5060429-5060443 +
  14. x:8248954-8248968 -
  15. x:8401527-8401541 -
  16. x:12232525-12232539 +
  17. x:13913962-13913976 +
  18. x:19632881-19632895 +
  19. node_68951:158-172 +
  20. node_34430:84-98 -
star

Sense Strand Reads

##########################################################################################################################################################################################################################################################
GAGAAGGCACAAAATCACCCACAGCCACTGAAATTTTCTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAAAACCGAACCAACAAACAAAAAAAGTGCGCTCCGTGAGCGGGAAAACAATAACAAAATCAAGAGACATGCGATTATAAAACGCACAAAATAACTGAGTGATCAAAAAAAAAAATTAAATGCGTGTCTCATGGCTTGACTGTACTGTGTATTAAAAAATGTGATTGTGTCTGCTGTC
**************************************************((((((......)))))).................................(((((...))))).......................((((((((.(((.......(((...........)))...............))).))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
..............................................................................................................................................................................................................................GTTAAAAAATGTGATTGTGTCTGC.... 24 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ATGGCTTGACTGTACTGTGTA........................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TGTAATGTCTGTTAAAAAATGTG............... 23 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................GGCTTGACTGTACTGTGTATT......................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................TAAAAAATGTGATTGTGTCTG..... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........CAAAATCACCCACAGCCACTG............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................TGAGTGATCTAAAAAAA.................................................................. 17 1 6 0.33 2 0 0 0 0 0 0 2 0 0 0
...................................................................................................................................................................................................................CTGGACTGTTTATTAAAAA.................... 19 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................ACTCGGTGATCAAAAAAAAAAA............................................................... 22 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.....................................CTTTTGGGCTCCGGGGA.................................................................................................................................................................................................... 17 2 20 0.25 5 0 0 4 0 0 0 0 0 1 0
...............................................................................................................................................................AAAAAAACAGAGAGATCAAAAAAA................................................................... 24 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................ACTAACTGATCAAAAAAAA.................................................................. 19 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................TAACAAAATCGAGAGATAT............................................................................................................ 19 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................ATGCGATGATAAAACG.............................................................................................. 16 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................TCCGTGACCGGGAAAAT................................................................................................................................. 17 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TCTTAACTGTACTGTGTCT.......................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................CTTATGGTTTGACTGAACT................................ 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................GATCAAAAAAAAAAA............................................................... 15 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.....................................CTTTTGCGCTCCGGGGGT................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CTCTTCCGTGTTTTAGTGGGTGTCGGTGACTTTAAAAGAAAACGCGAGGCCACTCTTCTATTAAAGTGTTTGGTTTTGGCTTGGTTGTTTGTTTTTTTCACGCGAGGCACTCGCCCTTTTGTTATTGTTTTAGTTCTCTGTACGCTAATATTTTGCGTGTTTTATTGACTCACTAGTTTTTTTTTTTAATTTACGCACAGAGTACCGAACTGACATGACACATAATTTTTTACACTAACACAGACGACAG
**************************************************((((((......)))))).................................(((((...))))).......................((((((((.(((.......(((...........)))...............))).))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
........................................................................GTTTTGGCTTGGTTGTTTGTT............................................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0
......................................................................................................................................................TTTTGCGTGTTTTATTGACTC............................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
.......................................................................GGTTTTGGCTTGGTTGTTTG............................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................ATTTTGCGTGTTTTATTGACT................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................GTGTAAGTGACTCACTAGTTT....................................................................... 21 3 2 0.50 1 0 0 1 0 0 0
.............................................................................................................................................ACGCTAATATATTGCTTG........................................................................................... 18 2 6 0.17 1 0 0 0 1 0 0
..............................................................................................................................................................................AGTTTTTCTTTTGAATTTACTC...................................................... 22 3 7 0.14 1 0 0 0 0 1 0
.........................................................................................................................................................................TCACTAGTTTTTCTGTTTA.............................................................. 19 2 11 0.09 1 1 0 0 0 0 0
....................................................................TTTGGTTTTGGGTTGGCTG................................................................................................................................................................... 19 2 20 0.05 1 0 1 0 0 0 0
...........................................................................................TTTTTTTTACGCTAGGCCCT........................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:14399769-14400018 - dsi_15097 GAG-A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AACCGAACCA--ACA-----AACAA-A--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAT--G----CG------------------------------ATTATAAAACGCACAAAATAACTGAG--------------------------------------------TGATCA---------------AAAAAAA---AAATTA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-TGCT-------GTC
droSec2 scaffold_0:6871729-6871975 - GAG-A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AACCGAACCA--ACA-----AACAA-A--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAT--G----CG------------------------------ATTATAAAACGCACAAAATAACTGAG--------------------------------------------TGA------------------CAAAAAA---AAATTA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-TGCT-------GTC
dm3 chr3L:14750745-14750991 - GAG-A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AACCGAACCA--ACA-----AACAA-A--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAT--G----CG------------------------------ATTATAAAACGAACAAAATAACTGAG--------------------------------------------TGA------------------CAAAAAA---AAATTA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-GGCT-------GTC
droEre2 scaffold_4784:14717266-14717515 - GAG-A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AACCAAACCA--ACA-----AACAA-A--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAC--A----CG------------------------------ATTATAAAACGCACAAAATAACTGAG--------------------------------------------TGACAA---------------AAAAAAA---AAATTA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-TGCT-------GTC
droYak3 3L:14838064-14838311 - GAG-A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AACCAAACCA--ACA-----AACAAAA--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAT-A------------------------------------------------------------------------------------------------TCAAGAGACAC--A----TG------------------------------ATTATAAAACGCACAAAATAACTGAG--------------------------------------------TGA------------------CAAAAAA---AAATTA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-TGCT-------GTC
droEug1 scf7180000409456:1000256-1000508 - GAG-A---AGGCA--AAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----A-TCG-------ACAAAACAAAAAA-A-TAAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAA--G----CG------------------------------GTTATAAAACATACAAAA-AACAGAG--------------------------------------------CGA-----------------ACAAAAAA---AAATCA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTATATTAG--G--------AAGCAAAA-TATGTGA------------TT--G-------------------------------TGTCTGTCT-------GTC
droBia1 scf7180000302428:5132153-5132436 + GAG-A---AGGCAC--AG-T-----------CACCCACAGCGCCACAGCATT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCCAACCGAAAAGCAGCCA--GCAAAACA-ACACGA--AAA--AGTGCGCTCCGCGAGCGG------G---------------GAAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCTAGAGGCAC--ACACACGGATT------G-------------------ATTATAAAACGGGA--AA-AACTGAG--------------------------------------------CAACGAA-------------ACGAAAAAACCAAATCA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTGTTGA--G--------AAA-AAAA-AATGTGA------------CC--G-------------------AG----------CGTA-TG-T-------GTC
droTak1 scf7180000415135:462109-462364 - GAG-A---AGGCA--AAA-T-----------CACCCACAG--------CATT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AAGCCAGCCA--ACAAAACA-ACAAGA--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-G------------------------------------------------------------------------------------------------TCTAGAGACAC--A----CG------------------------------ATTATAAAACAA----AA-AGCTGAG--------------------------------------------CAACGAA-------AAACTGACTGAAAA---AAATCA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGCATTA-----------------AAA-AATGTAA------------CT--G-------------------AG----------TGTA-TG-T-------GTC
droEle1 scf7180000491199:1922405-1922624 - GAG-A---AGGCA--AAATT-----------CACCCACGG--------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AAACGAATCA--ACA-----AA-AA-A--CAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCTAGAGAAACAAG----AG------------------------------GTTATAAAACAA----------------------------------------------------------------------------------AAAA---AATCGA-----------AATGCGTGTCTCATGGCTCG-ACTGTAC---------------------TGTATATTA-----------------A-A-AATGTGA------------CT--G-------------------------------TG------T-------GTC
droRho1 scf7180000777233:55773-55995 + GAG-A---AGGCA--AAATT-----------CACCCACAG--------CATT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AAACGAATCA--ACA-----AAAAA-A--CAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACACAAG----AG------------------------------GTTATAAAACAA----------------------------------------------------------------------------------AAAA---AATCTT-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGAATATTG-----------------A-A-TATGTGA------------CT--G-------------------------------TGT----CC-------GTC
droFic1 scf7180000453807:206598-206845 - GAG-C---AGGCG---AA-T-----------CACCCA-------------CT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCGA-----AAACCAGCCA--ACA-----AAAAA-AACAAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAA--T----CG------------------------------GTTATAAAACACACAAAA-AACTGAG--------------------------------------------TGA------------------ACTAAAA---AAACCA-----------AATGCGTGTCTCATG-TTTG-ACTGTAC---------------------TGTGCATTA-----------------AATAAATGTGACACAGACACAGACT--G-------------------------------TGT----CC-------GTC
droKik1 scf7180000302383:897924-898183 - GAG-A---AGGGA---AA-T-----------CACCCACAG--------CAGT--AAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACACACCAA-----AATCA-----------------CACAA--AAA--AGTGCGCTCCGCGAGCGG------G----------------AAAACAATAACAAA-ATAAA-----------------------------------------------AAGC-GCTA------------------------------------CCAAGAGGGCC--G----AG------------------------------ATTATAAAACAACC--AAGAACTGAG--------------------------------------------CGAGTG-GGGGCAAAAAAGGAGAAAAAA---AAACGA-----------AATGCGTGTCTCATGGATTG-ACTGTACAA--T----------------TGTGTATTA-----------------A-A-TATGTGA------------CT--G-------------------------------CG----GCT-------GTG
droAna3 scaffold_13337:4351547-4351804 + GAACAGTGAGGGA---AA-G-----------CACCCACGG--------CACT--GA-ATTTT--CTTTGGCGCTCCGGTGAGAAGATAATTTCACA----------------------C-------------GA--AAA--AGTGCGCTCCG-GAGCGG------G---------------AAAAACAATAACAAATATAAA----------------------------------------------------------------------------------------------------------------------------AACCAACAAGAGACCACGTTAATAAAACGCACAAAA--ACG-----------------------------------------------TTT------------------CGAAAAA---AAATTGAAGCAAAAAGGAATAC-TGTTCGACGACGAC-ACTGTACAA--TTTATAATTTTCAATATTGTGCGTTCAACGACGAGTCC--------------GA------------TT--A----------------------------------C-GGCT-------GTA
droBip1 scf7180000395450:480295-480574 + AAC-AGTGAGGGA---AA-T-----------TACCCACGG--------CAGT--GA-ATTTT--CTTTGGCGCTCCGGTGAGAAGATAATTTCACA----------------------C-------------GA--AAA--AGTGCGCTCCG--AGCGG------G---------------AAAAACAATAACAAT-ATAAA----------------------------------------------------------------------------------------------------------------------------AACCAACAAGAGACCACGTTAATAAAACGCACAAAAT--CGGAG----------------------------------------------------------------------AA---ATATTG----------GAATAC-TGTACGAC-ACGACGACTGTACAAAATTTATAATTTTCAATATTGTGCGTTCAAC---GAGTCC--------------GA------------TT--ACGGCTGTATGTGTGTGTGGTGTGTGTGGGTCTGTC-TGCTGTATAGTTTC
dp5 XR_group6:998294-998535 + GAG-A---GGGGA---AA-G-----------CACCAACTGCA-GA---CGGG--CAGATTTT--CT-TTGCGCTCCGGTGAGAAGATAATTTCAGC---------------------AA-------------AA--AAG--TGTGCGCTCCGGGAGCGG------G----------------AAAAAATTAACAGAAATAACACC--------------------------------------------AAGC----A------------------------------------CCAAGAGACAC--T----AGGTTT--------------------------GTTATAAAACATTT--AA-AACGGAG--------------------------------------------AGTA------------GATGGCGAGAAA---AAACGA-----------AATGCGTGGCTCAGGGCTCG-ACTGTACAA--T----------------TGTGGAT--------------------AA-AACGTAT------------ATATG---------------------------------TG----T-------GCG
droPer2 scaffold_12:1677036-1677277 + GAG-A---GGGGA---AA-G-----------CACCAACTGCA-GA---CGGG--CAGATTTT--CT-TTGCGCTCCGGTGAGAAGATAATTTCAGC---------------------AA-------------AA--AAG--TGTGCGCTCCGGGAGCGG------G----------------AAAAAATTAACAGAAATAACACC--------------------------------------------AAGC----A------------------------------------CCAAGAGACAC--T----AGGTTT--------------------------GTTATAAAACATTT--AA-AACGGAG--------------------------------------------AGTA------------GATGGCGAGAAA---AAACGA-----------AATGCGTGGCTCAGGGCTCG-ACTGTACAA--T----------------TGTGGAT--------------------AA-AACGTAT------------ATATG---------------------------------TG----T-------GCG
droWil2 scf2_1100000004949:1093132-1093324 + GAG-A---AGGGAAAATA-G-----------CAGCTA-----------AACTGAAAGATTTTTCATTTGGCGCTCCGGTGAGAAGATAAA-----AAAGC-----------------AAAGA-----AAAAA-A--AA-----------ACGGGAGCGA------G--------------TGAAAACAATAACAAA-AGAGA-----------------------------------------------CAGAGGCTG------------------------------------CAA------------------ATTGTGATAAAATTCAAAATGATACAAATTGAGAAAAATACACAAAATTAA-------------------------------------------------AA------------------AAAAAAA---AAATTC-----------AA-------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:16847061-16847261 - GGG-A---AAGCA--A-A-C---CGAGTATAAAATAGCAGC-------CAGC---AGATTTT--TCTTTGCGCTCCGGTGAGAAGATAATTTCAACATGC-----------------AT-------------AA--AAT--TGTTCGCTCCGGGAGCGACGGCGTGTAAACAAACAA----------AATAACAA---------CACAAAAGTGAATGAAATTGT--AGTTATAAAACAAACGCATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAA---ACGCAA-----------AATGCGTGGC------GTTA-ACTGTAC-----------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:19844307-19844613 + GCA-A---ACCGA--GTA-----------TAAAATAGCAG--------CAAG--CAGATTTT--TCTTTGCGCTCCGGTGAGAAGATAATTTCAACATGC-----------------AT-------------AA--AAT--TGCTCGCTCCGGGAGCGACGGCGTGTAAACAAACAG----------AATAACAA---------CACAAAAGTGAATGAAATTGT--AGTTATAAAACAAATGCTGAGGCAAAAGCAAAATGCGTGGCGTTAACTGTACAAAGACCAAAAAAAAGATAGAAAAAAGAA----AA------------------------------CTAAGAACATAA----------------------------------------------------------------------------------GCAA---AATATG-----------AATATGTATTTCTGGGCGTG-TCTGAAT---------------------AATGC--TA------------------AA-GTGATAA------------TC--G-------------------CG----------CGCT-TTTT-------TCC
droGri2 scaffold_15110:16259827-16260130 + GGG-A---AAGCA----A-TAACCGAGTATAAAATAGCAG--------CAAG--CAGATTTT--TCTTTGCGCTCCGGTGAGAAGATAATTTCAACATGC-----------------AT-------------AA--AATTCTGTTCGCTCCGGGAGCGACGGCGTGTAAACAAACAAAAGCAACAACAATAACAA---------CACAATTGTGAATGAATCTGTGCAGTTTTGAAACAAATGC--------------AATGC--CGCGTTAACT-------------------------------------------------------------------------------GTACAAAAC--TGTAAAAACGCTAAAACCAAAAAGCAACAAAAAAACCACACATTTCAAA---------------------AAGAAAA---AAATAGAA-----TGGGAAAAC-C---------------------------------------------CGATCA-------------------A-AATATGC------------AT--A-------------------------------T----TGCT-------GT-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAG-A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AACCGAACCA--ACA-----AACAA-A--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAT--G----CG------------------------------ATTATAAAACGCACAAAATAACTGAG--------------------------------------------TGATCA---------------AAAAAAA---AAATTA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-TGCT-------GTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCTTG-ACTGTAC---------------------TGTGTA..................................................................................................2111.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTG-ACTGTAC---------------------TGTGTATT................................................................................................2111.00100001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-TG............2111.00100000000001000000
.............CAAAA-T-----------CACCCACAGC-------CACT--G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GATCA---------------AAAAAAA---AAA.......................................................................................................................................................................15200.05100000000000001000
droSec2
GAG-A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AACCGAACCA--ACA-----AACAA-A--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAT--G----CG------------------------------ATTATAAAACGCACAAAATAACTGAG--------------------------------------------TGA------------------CAAAAAA---AAATTA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-TGCT-------GTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
............................................................TT--CTTTTGCGCTCCGGTGAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
...................................................................................................................................A-A--AAA--AGTGCGCTCCGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
GAG-A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AACCGAACCA--ACA-----AACAA-A--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAT--G----CG------------------------------ATTATAAAACGAACAAAATAACTGAG--------------------------------------------TGA------------------CAAAAAA---AAATTA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-GGCT-------GTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................A-A--AAA--AGTGCGCTCCGTGAGCGG------G----------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGA------------TT--G-------------------------------TGTC-GGCT-------GTC2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-AATGTGA------------TT--G-------------------------------TGTC-GGCT-------A..2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................G----CG------------------------------ATTATAAAACGAACA................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA---AAATTA-----------AATGCGTGT................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................AA--AGTGCGCTCCGTGAGCGG------G----------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GTGAGCGG------G----------------AAAACAATAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCATGGCTTG-ACTGTAC---------------------TGTGTAT.................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................GCGCTCCGTGAGCGG------G----------------AAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC---------------------TGTGTATTA-----------------AAA-AATGTG....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............................................................TT--CTTTTGCGCTCCGGTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GAAATTTT--CTTTTGCGCTCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATGTGA------------TT--G-------------------------------TGTC-GGCT-------G..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....A---AGGCACAAAA-T-----------CACCCACAGC-------CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------T..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------AATGCGTGTCTCATGGCTTG-....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GTGCGCTCCGTGAGCGG------G----------------AAAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................AAA--AGTGCGCTCCGTGAGCGG------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGAGACAT--G----CG------------------------------ATTATAAAAC.....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-AATGTGA------------TT--G-------------------------------TGTC-GGCT-------...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACAAAA-T-----------CACCCACAGC-------CACT--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAT--G----CG------------------------------ATT............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...................................................................................................................................A-A--AAA--AGTGCGCTCCGTGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................A-A--AAA--AGTGCGCTCCGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................ACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACA.......................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTA-----------AATGCGTGTCTCATGGCTTG-A...................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TCACAAACCAA-----AACCGAACCA--ACA-----AAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................A--AAA--AGTGCGCTCCGTGAGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............CAAAA-T-----------CACCCACAGC-------CACT--GA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AACTGAG--------------------------------------------TGA------------------CAAAAAA---AAAT......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AACTGAG--------------------------------------------TGA------------------CAAAAAA---AAATT.....................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-GG............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................T--CTTTTGCGCTCCGGTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................A--AGTGCGCTCCGTGAGCGG------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CAA-----AACCGAACCA--ACA-----AACAA-A--AAA--AG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TC...............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-ACTGTAC---------------------TGTGTATTA-----------------AAA-A.........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AAA--AGTGCGCTCCGTGAGCGG------G----------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................CTCCGGTGAGAAGATAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.........................................................ATTTT--CTTTTGCGCTCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...........CACAAAA-T-----------CACCCACAGC-------CACT--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GTGAGCGG------G----------------AAAACAATA........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................A------------------------------------------------------------------------------------------------TCAAGAGACAT--G----CG------------------------------ATTATA.........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAA---AAATTA-----------AATGCGTGT................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAT--G----...............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................CACT--GAAATTTT--CTTTTGCGCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.............................................................T--CTTTTGCGCTCCGGTGAGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------------TGTGTATTA-----------------AAA-AATGTG....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CGAACAAAATAACTGAG--------------------------------------------TGA------------------C...................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CAA-----AACCGAACCA--ACA-----AACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................C-------CACT--GAAATTTT--CTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AACGAACAAAATAACTGAG--------------------------------------------TGA------------------CAAA................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droEre2
GAG-A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AACCAAACCA--ACA-----AACAA-A--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAC--A----CG------------------------------ATTATAAAACGCACAAAATAACTGAG--------------------------------------------TGACAA---------------AAAAAAA---AAATTA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-TGCT-------GTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................TTTT--CTTTTGCGCTCCGGTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCTTG-ACTGTAC---------------------TGTGTA..................................................................................................2111.0010000010
droYak3
GAG-A---AGGCACAAAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AACCAAACCA--ACA-----AACAAAA--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAT-A------------------------------------------------------------------------------------------------TCAAGAGACAC--A----TG------------------------------ATTATAAAACGCACAAAATAACTGAG--------------------------------------------TGA------------------CAAAAAA---AAATTA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTATTA-----------------AAA-AATGTGA------------TT--G-------------------------------TGTC-TGCT-------GTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................CCACAGC-------CACT--GAAATTTT--C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
....................................................................................................................................AA--AAA--AGTGCGCTCCGTGAGCGG------G----------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.....................................................................................................................................A--AAA--AGTGCGCTCCGTGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
GAG-A---AGGCA--AAA-T-----------CACCCACAGC-------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----A-TCG-------ACAAAACAAAAAA-A-TAAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAA--G----CG------------------------------GTTATAAAACATACAAAA-AACAGAG--------------------------------------------CGA-----------------ACAAAAAA---AAATCA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTATATTAG--G--------AAGCAAAA-TATGTGA------------TT--G-------------------------------TGTCTGTCT-------GTCSizeHit CountTotal NormTotal
No Reads
droBia1
GAG-A---AGGCAC--AG-T-----------CACCCACAGCGCCACAGCATT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCCAACCGAAAAGCAGCCA--GCAAAACA-ACACGA--AAA--AGTGCGCTCCGCGAGCGG------G---------------GAAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCTAGAGGCAC--ACACACGGATT------G-------------------ATTATAAAACGGGA--AA-AACTGAG--------------------------------------------CAACGAA-------------ACGAAAAAACCAAATCA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGTGTTGA--G--------AAA-AAAA-AATGTGA------------CC--G-------------------AG----------CGTA-TG-T-------GTCSizeHit CountTotal NormTotal
No Reads
droTak1
GAG-A---AGGCA--AAA-T-----------CACCCACAG--------CATT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AAGCCAGCCA--ACAAAACA-ACAAGA--AAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-G------------------------------------------------------------------------------------------------TCTAGAGACAC--A----CG------------------------------ATTATAAAACAA----AA-AGCTGAG--------------------------------------------CAACGAA-------AAACTGACTGAAAA---AAATCA-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGTGCATTA-----------------AAA-AATGTAA------------CT--G-------------------AG----------TGTA-TG-T-------GTCSizeHit CountTotal NormTotal
No Reads
droEle1
GAG-A---AGGCA--AAATT-----------CACCCACGG--------CACT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AAACGAATCA--ACA-----AA-AA-A--CAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCTAGAGAAACAAG----AG------------------------------GTTATAAAACAA----------------------------------------------------------------------------------AAAA---AATCGA-----------AATGCGTGTCTCATGGCTCG-ACTGTAC---------------------TGTATATTA-----------------A-A-AATGTGA------------CT--G-------------------------------TG------T-------GTCSizeHit CountTotal NormTotal
No Reads
droRho1
GAG-A---AGGCA--AAATT-----------CACCCACAG--------CATT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCAA-----AAACGAATCA--ACA-----AAAAA-A--CAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACACAAG----AG------------------------------GTTATAAAACAA----------------------------------------------------------------------------------AAAA---AATCTT-----------AATGCGTGTCTCATGGCTTG-ACTGTAC---------------------TGAATATTG-----------------A-A-TATGTGA------------CT--G-------------------------------TGT----CC-------GTCSizeHit CountTotal NormTotal
No Reads
droFic1
GAG-C---AGGCG---AA-T-----------CACCCA-------------CT--GAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACAAACCGA-----AAACCAGCCA--ACA-----AAAAA-AACAAA--AGTGCGCTCCGTGAGCGG------G----------------AAAACAATAACAAA-A------------------------------------------------------------------------------------------------TCAAGAGACAA--T----CG------------------------------GTTATAAAACACACAAAA-AACTGAG--------------------------------------------TGA------------------ACTAAAA---AAACCA-----------AATGCGTGTCTCATG-TTTG-ACTGTAC---------------------TGTGCATTA-----------------AATAAATGTGACACAGACACAGACT--G-------------------------------TGT----CC-------GTCSizeHit CountTotal NormTotal
No Reads
droKik1
GAG-A---AGGGA---AA-T-----------CACCCACAG--------CAGT--AAAATTTT--CTTTTGCGCTCCGGTGAGAAGATAATTTCACACACCAA-----AATCA-----------------CACAA--AAA--AGTGCGCTCCGCGAGCGG------G----------------AAAACAATAACAAA-ATAAA-----------------------------------------------AAGC-GCTA------------------------------------CCAAGAGGGCC--G----AG------------------------------ATTATAAAACAACC--AAGAACTGAG--------------------------------------------CGAGTG-GGGGCAAAAAAGGAGAAAAAA---AAACGA-----------AATGCGTGTCTCATGGATTG-ACTGTACAA--T----------------TGTGTATTA-----------------A-A-TATGTGA------------CT--G-------------------------------CG----GCT-------GTGSizeHit CountTotal NormTotal
No Reads
droAna3
GAACAGTGAGGGA---AA-G-----------CACCCACGG--------CACT--GA-ATTTT--CTTTGGCGCTCCGGTGAGAAGATAATTTCACA----------------------C-------------GA--AAA--AGTGCGCTCCG-GAGCGG------G---------------AAAAACAATAACAAATATAAA----------------------------------------------------------------------------------------------------------------------------AACCAACAAGAGACCACGTTAATAAAACGCACAAAA--ACG-----------------------------------------------TTT------------------CGAAAAA---AAATTGAAGCAAAAAGGAATAC-TGTTCGACGACGAC-ACTGTACAA--TTTATAATTTTCAATATTGTGCGTTCAACGACGAGTCC--------------GA------------TT--A----------------------------------C-GGCT-------GTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................G-----------CACCCACGG--------CACT--GA-ATTTT--CTTTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..........................................................................................................................................A--AGTGCGCTCCG-GAGCGG------G---------------AAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
......TGAGGGA---AA-G-----------CACCCACGG--------CACT--G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.......GAGGGA---AA-G-----------CACCCACGG--------CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..ACAGTGAGGGA---AA-G-----------CACCCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........GA---AA-G-----------CACCCACGG--------CACT--GA-AT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......GAGGGA---AA-G-----------CACCCACGG--------CAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
AAC-AGTGAGGGA---AA-T-----------TACCCACGG--------CAGT--GA-ATTTT--CTTTGGCGCTCCGGTGAGAAGATAATTTCACA----------------------C-------------GA--AAA--AGTGCGCTCCG--AGCGG------G---------------AAAAACAATAACAAT-ATAAA----------------------------------------------------------------------------------------------------------------------------AACCAACAAGAGACCACGTTAATAAAACGCACAAAAT--CGGAG----------------------------------------------------------------------AA---ATATTG----------GAATAC-TGTACGAC-ACGACGACTGTACAAAATTTATAATTTTCAATATTGTGCGTTCAAC---GAGTCC--------------GA------------TT--ACGGCTGTATGTGTGTGTGGTGTGTGTGGGTCTGTC-TGCTGTATAGTTTCSizeHit CountTotal NormTotal
No Reads
dp5
GAG-A---GGGGA---AA-G-----------CACCAACTGCA-GA---CGGG--CAGATTTT--CT-TTGCGCTCCGGTGAGAAGATAATTTCAGC---------------------AA-------------AA--AAG--TGTGCGCTCCGGGAGCGG------G----------------AAAAAATTAACAGAAATAACACC--------------------------------------------AAGC----A------------------------------------CCAAGAGACAC--T----AGGTTT--------------------------GTTATAAAACATTT--AA-AACGGAG--------------------------------------------AGTA------------GATGGCGAGAAA---AAACGA-----------AATGCGTGGCTCAGGGCTCG-ACTGTACAA--T----------------TGTGGAT--------------------AA-AACGTAT------------ATATG---------------------------------TG----T-------GCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................AACGGAG--------------------------------------------AGTA------------GATGGCG..................................................................................................................................................................................1811.0010000000001
droPer2
GAG-A---GGGGA---AA-G-----------CACCAACTGCA-GA---CGGG--CAGATTTT--CT-TTGCGCTCCGGTGAGAAGATAATTTCAGC---------------------AA-------------AA--AAG--TGTGCGCTCCGGGAGCGG------G----------------AAAAAATTAACAGAAATAACACC--------------------------------------------AAGC----A------------------------------------CCAAGAGACAC--T----AGGTTT--------------------------GTTATAAAACATTT--AA-AACGGAG--------------------------------------------AGTA------------GATGGCGAGAAA---AAACGA-----------AATGCGTGGCTCAGGGCTCG-ACTGTACAA--T----------------TGTGGAT--------------------AA-AACGTAT------------ATATG---------------------------------TG----T-------GCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................AA-G-----------CACCAACTGCA-GA---CGGG--C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
...............................CACCAACTGCA-GA---CGGG--C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................................................................................................................................AG--TGTGCGCTCCGGGAGCGG------G----------------AAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-ACTGTACAA--T----------------TGTGGA..................................................................................................1811.001100000
.................A-G-----------CACCAACTGCA-GA---CGGG--C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGTGGCTCAGGGCTC......................................................................................................................................1811.001000010
droWil2
GAG-A---AGGGAAAATA-G-----------CAGCTA-----------AACTGAAAGATTTTTCATTTGGCGCTCCGGTGAGAAGATAAA-----AAAGC-----------------AAAGA-----AAAAA-A--AA-----------ACGGGAGCGA------G--------------TGAAAACAATAACAAA-AGAGA-----------------------------------------------CAGAGGCTG------------------------------------CAA------------------ATTGTGATAAAATTCAAAATGATACAAATTGAGAAAAATACACAAAATTAA-------------------------------------------------AA------------------AAAAAAA---AAATTC-----------AA-------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................GAAAGATTTTTCATTTGGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..G-A---AGGGAAAATA-G-----------CAGCTA-----------AACTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...............................................................................................................................AAAAA-A--AA-----------ACGGGAGCGA------G--------------TG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...................G-----------CAGCTA-----------AACTGAAAGATTTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..G-A---AGGGAAAATA-G-----------CAGCTA-----------AA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...............ATA-G-----------CAGCTA-----------AACTGAAAGATTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
droVir3
GGG-A---AAGCA--A-A-C---CGAGTATAAAATAGCAGC-------CAGC---AGATTTT--TCTTTGCGCTCCGGTGAGAAGATAATTTCAACATGC-----------------AT-------------AA--AAT--TGTTCGCTCCGGGAGCGACGGCGTGTAAACAAACAA----------AATAACAA---------CACAAAAGTGAATGAAATTGT--AGTTATAAAACAAACGCATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAA---ACGCAA-----------AATGCGTGGC------GTTA-ACTGTAC-----------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................TCGCTCCGGGAGCGACGGCGTGTAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
............................................................TT--TCTTTGCGCTCCGGTGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................AAAACAAACGCATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAA---AC........................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TGAATGAAATTGT--AGTTATA.............................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
droMoj3
GCA-A---ACCGA--GTA-----------TAAAATAGCAG--------CAAG--CAGATTTT--TCTTTGCGCTCCGGTGAGAAGATAATTTCAACATGC-----------------AT-------------AA--AAT--TGCTCGCTCCGGGAGCGACGGCGTGTAAACAAACAG----------AATAACAA---------CACAAAAGTGAATGAAATTGT--AGTTATAAAACAAATGCTGAGGCAAAAGCAAAATGCGTGGCGTTAACTGTACAAAGACCAAAAAAAAGATAGAAAAAAGAA----AA------------------------------CTAAGAACATAA----------------------------------------------------------------------------------GCAA---AATATG-----------AATATGTATTTCTGGGCGTG-TCTGAAT---------------------AATGC--TA------------------AA-GTGATAA------------TC--G-------------------CG----------CGCT-TTTT-------TCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCTGGGCGTG-TCTGAAT---------------------AATGC--.................................................................................................2611.001100000
....................................................................................................................................................................................................................................................................TGCGTGGCGTTAACTGTACAAAGAC..........................................................................................................................................................................................................................................................................................................................................2511.001000010
.......................................................AGATTTT--TCTTTGCGCTCCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
GGG-A---AAGCA----A-TAACCGAGTATAAAATAGCAG--------CAAG--CAGATTTT--TCTTTGCGCTCCGGTGAGAAGATAATTTCAACATGC-----------------AT-------------AA--AATTCTGTTCGCTCCGGGAGCGACGGCGTGTAAACAAACAAAAGCAACAACAATAACAA---------CACAATTGTGAATGAATCTGTGCAGTTTTGAAACAAATGC--------------AATGC--CGCGTTAACT-------------------------------------------------------------------------------GTACAAAAC--TGTAAAAACGCTAAAACCAAAAAGCAACAAAAAAACCACACATTTCAAA---------------------AAGAAAA---AAATAGAA-----TGGGAAAAC-C---------------------------------------------CGATCA-------------------A-AATATGC------------AT--A-------------------------------T----TGCT-------GT-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:17 AM