ID:

dsi_15023

 Coordinate:

2r:9182449-9182598 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.3 -27.6 -27.4 -27.4

Flybase annnotation

five_prime_UTR [2r_9182088_9182448_-]; exon [2r_9181631_9182448_-]; intron [2r_9182449_9185131_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCATTTTCAATGTAAACCAAACTTAGCAAAACCAGTGTCAGTGAAGAAATTCTTGTATTAATGTATAAAATAACTAATGCAGAATTTAATGATGACTACCTTCATTAAAAAAGGAACTCAAACCTAATTCTTTGGGGGGTTTTTTTTTTATACATTAAATGTCGACATTGTTGTAACAGTTTCCCTTCTCTTGCTTGCAGTGATATTCAGAAAGAACTCCAAACGCTACGTGGCAGAGGCGAATCACCGG
**************************************************.((.((...............(((...(((((....(((((.((((.........((((((((((((((...(((((....)))))))))))))))))))..........)))).))))))))))...)))...............))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553487
NRT_0-2 hours eggs
 M053
female body
 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
..............................................................................................................................................................................................................TCAGAAAGAACTCCAAACGCTACGTGGC................ 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TATTCAGAAAGAACTCCAAACGCTACGT................... 28 0 1 2.00 2 0 1 0 0 0 0 0 0 1
...................................TGTCAGAGGTGAAATTCTTG................................................................................................................................................................................................... 20 3 11 1.18 13 2 0 11 0 0 0 0 0 0
...................................................................................................................................................................................................................AAGAACTCCAAACGCTACGTGGCA............... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................TTAAAAAAGGAACTCA.................................................................................................................................. 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AAGAACTCCAAACGCTACGT................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................ATATTCAGAAAGAACTCCAAAC.......................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AAGAACTCCAAACGCTACGTGGCAGAG............ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATTCAGAAAGAACTCCAAACGCTACGG................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TACGTGGCAGAGGCGAATCACCGG 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................ATTCAGAAAGAACTCCAAACGC........................ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................TTCAGAAAGAACTCCAAACGCTACGTGG................. 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................................CAGAAAGAACTCCAAACGCTACGT................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....TTCAATGTAAACCAAACTTAGC............................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................ATTCAGAAAGAACTCCAAAC.......................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GAAAGAACTCCAAACGCTACGTGGCA............... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................ATCAGTGATATTCAGAAAGAACTCCAAA........................... 28 2 1 1.00 1 0 0 0 0 0 1 0 0 0
...................................TGTCAGAGGTGAAATTCTTGTA................................................................................................................................................................................................. 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................TTTGTGCGGTTTTTTTTTTATA.................................................................................................. 22 2 3 0.33 1 0 0 0 0 0 1 0 0 0
...............................................................................CACCATTTAATGATGACTAG....................................................................................................................................................... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0
......................................CAGAGGAGAAATTCTTGGAT................................................................................................................................................................................................ 20 3 13 0.08 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGTAAAAGTTACATTTGGTTTGAATCGTTTTGGTCACAGTCACTTCTTTAAGAACATAATTACATATTTTATTGATTACGTCTTAAATTACTACTGATGGAAGTAATTTTTTCCTTGAGTTTGGATTAAGAAACCCCCCAAAAAAAAAATATGTAATTTACAGCTGTAACAACATTGTCAAAGGGAAGAGAACGAACGTCACTATAAGTCTTTCTTGAGGTTTGCGATGCACCGTCTCCGCTTAGTGGCC
**************************************************.((.((...............(((...(((((....(((((.((((.........((((((((((((((...(((((....)))))))))))))))))))..........)))).))))))))))...)))...............))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
................................................................................................................................................................................................................TCTTTCTTGAGGTTTGCG........................ 18 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................................................AAAAAAAGATGTAATGTACTGCT..................................................................................... 23 3 3 0.67 2 0 0 2 0 0 0 0
...................................................................TCTCTTGGTTACGTCTTAAAT.................................................................................................................................................................. 21 3 2 0.50 1 0 1 0 0 0 0 0
..........................................................................................ATACTGCTGGAAGTAATT.............................................................................................................................................. 18 2 4 0.25 1 0 0 0 1 0 0 0
....................................................................TTATAGGTTACGTCTTAAATT................................................................................................................................................................. 21 2 4 0.25 1 0 0 0 1 0 0 0
..........................................................................GTTACGTCTTAAATTACT.............................................................................................................................................................. 18 1 7 0.14 1 0 1 0 0 0 0 0
................................................................................................ATGGCAGTAATCTTTTC......................................................................................................................................... 17 2 10 0.10 1 0 0 0 0 1 0 0
......................................................................................................................................................ACGTAATCCACAGCTGTAA................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1 0
..TAAAAGTTTCATTTCGTTT..................................................................................................................................................................................................................................... 19 2 20 0.05 1 0 1 0 0 0 0 0
.GGAAAAGTTACATTT.......................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:9182399-9182648 - dsi_15023 TCATTTTCAATGTAAAC-CAAAC-------------------------------------------------------------------------------TTAGCAAAACCAGTGTCAGT------------------------------------------------------GAAGAAATTCTTGTATTAATGTATAAAAT-----AACTAATGCAG---------------------------------------------------------------------------------AA-TTTAATGATGACTACC-------T-TCAT---TAAAAAAGG------------------------AACTCAAACCTAATTCTTT-----GGGGGGTTTTTTTT--TTATACATTAAATG----------TCGACATTGTT---GTAACAGTTTCCCTTCTCT-----TGCTTGCAGTGATATT----------------CAGA-AAGAACTCC--------AAACGCTACGTGGCAGAGGC-----GAATCACCGG
droSec2 scaffold_1:6019879-6020125 - TCATTTTCAATGTAAAC-CAAAC-------------------------------------------------------------------------------TTAGCAAAACCAGTGTCAGT------------------------------------------------------GAAGAAATTCTAGTATTAATGTATAAGAT-----AACTAATGCAG---------------------------------------------------------------------------------AA-TTTAATGATGACTAAC-------T-TCAT---TAAAAAAGA------------------------AACGCAAACCTAATTATTT-----GGGG-TTT--TTTT--TTATACATTAAATG----------TCGACATTGTT---GTAACAGTTTCCCTTCTCT-----TGCTTGCAGTGATATT----------------CAGA-AAGAACTCC--------AAACGCTACGTGGCAGAGGC-----GAATCACCGG
dm3 chr2R:8473528-8473755 - TCATTTC-A---------------------------------------------------------------------------------------------------------GTGTCAGT------------------------------------------------------GAATAAATTCTAGTATTAATGTGTAAGATTGTTCCAGTAATGCAG---------------------------------------------------------------------------------AA-TTTAATGATGACTAAC-------T-TCAT---TAAAAA-T------------------------AGACCCAAACCTAATTCTTG-----GGGG-T------TT--TTATACATTTAATG----------TCGACATTATT-GTATGACCGTTTCCCTTCTCTTGCTTTGCTTGCAGTGATATT----------------CAGA-AAGAACTCC--------AAACGCTACGTGGCAGAGGC-----GAATCACCGG
droEre2 scaffold_4845:17325796-17325994 + CTATTTTCAATGTAATG-CAAAA-------------------------------------------------------------------------------TTACCAAAACCTGTCGGAGG------------------------------------------------------GAACAAATACTAGTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATGGTCTTTAACCTATTTTTTT-----GGGG-TTT----TT--TCATACATTTATTG----------CCGCCACTGTT-TTATGACCGTTTCCCTTTTCT-----TACTTGCAGTGATATT----------------CAGA-AAGAACTCC--------AAAAGCTACGTGGCAGAGGC-----GAATCACCGG
droYak3 2R:8470465-8470713 + CCATTTTAAATGTAATG-CAAAA-------------------------------------------------------------------------------TTGCCAAAACCAGTGGCAGT------------------------------------------------------CAAAAAATACTAGTATTAATTTACAATATTTTTCCAGTAATGCAG---------------------------------------------------------------------------------AA-AT-------AGT------TA---T-TCATAATAAAAATAT------------------------GGTCCTAAACGTATTTCTTT-----GGGT--TTTTTTTT--TTACATATTTACTG----------TCGACATTGTT-GTATGACCGTTTCCATTCTCT-----TACTTGCAGTGATATT----------------CAGA-AAGAACTCC--------AAAAGCTACGTGGCAGAGAC-----GACTCAACGG
droEug1 scf7180000409672:4158181-4158450 + GGAATGAC--T-TGAAG-TAAAATAGAACCATGATAGTAAC-------------------------------------------------------------TTAGT--------------------------------------------------------------------------AACTCAGTCATGAGCTTATA---------------------------------------------------------------------------------CTTATTTCCAATAAACACAGAAGTTTAAAAATAGCTTGCTTTATACTT-CAG---GAAAATAAAGTCTGAAAATGAGTGCTTGATGTGTTCCTTAACTAAAACTTCC-----AGT--------------TCTTTAAA--TTA----------CATATGCAGTT-TGATGACCGATTCCTTTTCCT-----TACTTACAGTTATATC----------------CATA-AAGAACTCC--------AAAAGCTACGTGGCAGAGGT-----GAATCACCGG
droBia1 scf7180000302291:1569201-1569270 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTTTCT-----TATTTACAGTGATATC----------------CAAA-AAGAAGTTA--------AAAAGTTACGTGGCACAGGC-----GAATCACCGG
droTak1 scf7180000415762:688668-688884 + ATTATGT-ACTGGAAAT-CA-------------------------------------------------------------------------------------TTAAAAGATA---AATTTCACAAATTTTTGAATTTCTACTGAAAATCTTGATTAGATTGTTTACTTTACCAGCAGAAATATTAGTATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGGACTTTAAG-------------TGGATG-GT---------------------------------TTAACATAGAT--ATTGACCGTTACCTTTCCTT-----TTTCTCCAGTTATTGC----------------CGGAAAAAAACTAC--------AAAAGCGACGTGGCAGAGGC-----GAATCACCGG
droEle1 scf7180000491201:285782-286019 - TAATATTCAAAACAAAT-AAATA---------------------------------TTTTGTTC-T-TAGCT----AAAGTCGACAGTTATTTAATAGAATATTAGCAAAGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTG-CAG---GAAAA-AAGGTTAAATTTAGAATTCTTAAAATATACTTA----------------GAAGAG-ACT----CT--TTATTAACTTGTTTT---------TCAACGCAGTTTTGATGACCGTTTCCTTCTCTT-----TATTTACAGTGATATC----------------CAGA-AAAAACTCC--------GGGAGTTACGTGGCAGACGT-----GAATTACCGG
droRho1 scf7180000776809:10401-10673 + ACGTTGTCAAATTT--AATGAAT-----CCAATGAAATCTCTTCATTCAATAAATATATGTTTCCTTACGCTTAAAAAATACGACAG--ATTTCATAAAAAAACAAAAGGGTC----------------------------------------------------------------------------------------------------------------------------------------------------TTA------------------------------------------TTGAAATTTGTAAACTATAGCCCT-CAA---AAGAAAGAA----------------------------TTTTGTTGAATATATAAATAAGTG-CCT----TT--TAATGTACTTGGTA----------CCAACCTAGTT--TATAATCGTTTTCT---TTT-----TATTTACAGTGCTTTC----------------CAGA-AAGAACTCC--------AGGAGCTACGTGGCGGACGC-----GAATCACTGG
droFic1 scf7180000454066:823441-823734 + TTGTTCATAAATAA--TAAGAAT-------------------------------------------------------------------------------CTCTTAAATGAGTTTAAAAC----------------------------------------------------------------TA----------------TCATTAAAGTATCGCTGAATAATAGAAAATTCCTAAATTCATCAACTAAATTGGGTCTTTTATTTATCATTGATAGGAGTTATTTGCTTTAAACGCTT---------------------TAGTTTT-GCA---AAAAAAAAA----------------------------ATAACTTATGCATTTGAGAAGTTG-GTT----CCTTTTGTTCATT--TTA----------CTTACTCAGTT-AAATTAACATTTTGTTTCTCT-----CACTTACAGTGACATC----------------AAAA-AAGAAGTCC--------AAGAGTAACGTGGCAGAGGC-----GAAACACCGG
droKik1 scf7180000302476:1224870-1225010 - TTATTTTAAACACAT-T-AAAAT-------------------------------------------------------------------------------CTACTGAAATTGTTACCAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACGTC------------------TT-ATACAACA-T---TTTTTCTC-----CACTTGCAGTGAAAGCCACCAAAGT-AAAATCCGGA-GACAAAGAG--------GAGCCACACGTGCCAGAGGA-----AATCTATAAG
droAna3 scaffold_13266:13073009-13073120 - ACATTATTAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTC-TAATAACCATTTC-TCCCTCT-----TACTTGCAGTGGAATCTA----AAA-AAAAACAGAAGAAGAACTCCAAGAGGC--AGAGCTACGTGGCAGATGC-----GGAGAACC--
droBip1 scf7180000396730:854968-855035 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCATTTTCTGTTTTT-----TATTTGCAGTGGAATC----------------CAAA-GAGA-----------------ACTACGTGGCAGATGC-----GGAAAAGCAG
dp5 3:12440748-12440784 + C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------ACGCACGACGTGGCATAAGCAAAGAGAAACACTGG
droPer2 scaffold_99:107458-107610 - GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG-ATT----TC--TTATTGGCATATTTCTTCCGCTAACAAA-TTAATT-TAACAATTGATTCCATTCGTT----TTGCTTGCAGTTGGCGTACCTTAAGATACAAATAGCAGCAGAGCTGG-AGAGACCACGCACGACGTGGCATAAGCAAAGAGAAACACTGG
droMoj3 scaffold_6496:10879265-10879353 + TTCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCCTTTCT-G-----TTTTTGCAGTGATTGCCGTTTG----C-----CGAA-CGGAACTGC--------GACTGCGACGTGGCAGCGCT-AGAGGAGACAGCGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCATTTTCAATGTAAAC-CAAAC-------------------------------------------------------------------------------TTAGCAAAACCAGTGTCAGT------------------------------------------------------GAAGAAATTCTTGTATTAATGTATAAAAT-----AACTAATGCAG---------------------------------------------------------------------------------AA-TTTAATGATGACTACC-------T-TCAT---TAAAAAAGG------------------------AACTCAAACCTAATTCTTT-----GGGGGGTTTTTTTT--TTATACATTAAATG----------TCGACATTGTT---GTAACAGTTTCCCTTCTCT-----TGCTTGCAGTGATATT----------------CAGA-AAGAACTCC--------AAACGCTACGTGGCAGAGGC-----GAATCACCGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------CAGA-AAGAACTCC--------AAACGCTACGTGGC.....................2812.00200000000200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATT----------------CAGA-AAGAACTCC--------AAACGCTACGT........................2812.00200000001100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACTCC--------AAACGCTACGTGGCA....................2411.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................T---TAAAAAAGG------------------------AACTCA.........................................................................................................................................................................................1611.00100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACTCC--------AAACGCTACGT........................2011.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATT----------------CAGA-AAGAACTCC--------AAAC...............................2211.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACTCC--------AAACGCTACGTGGCAGAG.................2711.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT----------------CAGA-AAGAACTCC--------AAACGCTACGG........................2711.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGGCAGAGGC-----GAATCACCGG2411.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT----------------CAGA-AAGAACTCC--------AAACGC.............................2211.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------------CAGA-AAGAACTCC--------AAACGCTACGTGG......................2811.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA-AAGAACTCC--------AAACGCTACGT........................2411.00101000000000000000
.....TTCAATGTAAAC-CAAAC-------------------------------------------------------------------------------TTAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT----------------CAGA-AAGAACTCC--------AAAC...............................2011.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-AAGAACTCC--------AAACGCTACGTGGCA....................2611.00100100000000000000
droSec2
TCATTTTCAATGTAAAC-CAAAC-------------------------------------------------------------------------------TTAGCAAAACCAGTGTCAGT------------------------------------------------------GAAGAAATTCTAGTATTAATGTATAAGAT-----AACTAATGCAG---------------------------------------------------------------------------------AA-TTTAATGATGACTAAC-------T-TCAT---TAAAAAAGA------------------------AACGCAAACCTAATTATTT-----GGGG-TTT--TTTT--TTATACATTAAATG----------TCGACATTGTT---GTAACAGTTTCCCTTCTCT-----TGCTTGCAGTGATATT----------------CAGA-AAGAACTCC--------AAACGCTACGTGGCAGAGGC-----GAATCACCGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT----------------CAGA-AAGAACTCC--------AAACGCTACGTG.......................2811.0010100
dm3
TCATTTC-A---------------------------------------------------------------------------------------------------------GTGTCAGT------------------------------------------------------GAATAAATTCTAGTATTAATGTGTAAGATTGTTCCAGTAATGCAG---------------------------------------------------------------------------------AA-TTTAATGATGACTAAC-------T-TCAT---TAAAAA-T------------------------AGACCCAAACCTAATTCTTG-----GGGG-T------TT--TTATACATTTAATG----------TCGACATTATT-GTATGACCGTTTCCCTTCTCTTGCTTTGCTTGCAGTGATATT----------------CAGA-AAGAACTCC--------AAACGCTACGTGGCAGAGGC-----GAATCACCGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGGCAGAGGC-----GAATCACCGG2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA-AAGAACTCC--------AAACGCTACGTGGCA....................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACGTGGCAGAGGC-----GAATCACC..2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGAACTCC--------AAACGCTACGTGGCAG...................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACTCC--------AAACGCTACGTGGA.....................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTTCTCTTGCTTTGCTTGC..................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCC--------AAACGCTACGTGGCAGA..................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--------AAACGCTACGTGGCAGAGG................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGAACTCC--------AAACGCTAC..........................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------CAGA-AAGAACTCC--------AAACGCTACGTGGCA....................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT----------------CAGA-AAGAACTCC--------AAACGCTACGTG.......................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AATGTGTAAGATTGTTCCAGT...........................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCC--------AAACGCTACGTGGCAGAGGC-----GAA.......2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTACGTGGCAGAGGC-----GA........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGATATT----------------CAGA-AAGAACTCC--------...................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......C-A---------------------------------------------------------------------------------------------------------GTGTCAGT------------------------------------------------------GAATAAATTCT......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATT----------------CAGA-AAGAACTCC--------AAACGC.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCTACGTGGCAGAGGC-----GAA.......2211.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCTACGTGGCAGAGGC-----GAATC.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCC--------AAACGCTACGTGGCAGAG.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGGCAGAGGC-----GAATC.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA-AAGAACTCC--------AAACGCT............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA-AAGAACTCC--------AAACGCTACGTGGC.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--------AAACGCTACGTGGCAGAG.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................GTAAGATTGTTCCAGTAATGC......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT----------------CAGA-AAGAACTCC--------AAACGCTACGTGGC.....................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......C-A---------------------------------------------------------------------------------------------------------GTGTCAGT------------------------------------------------------GAATAAATTCTA.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCTACGTGGCAGAGGC-----G.........2011.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCCTTCTCTTGCTT.........................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGAACTCC--------AAACGCTACGTGGCAGA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATT----------------CAGA-AAGAACTCC--------AAACGCT............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATT----------------CAGA-AAGAACTCC--------AAAC...............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......C-A---------------------------------------------------------------------------------------------------------GTGTCAGT------------------------------------------------------GAATAAATTC.......................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTGGCAGAGGC-----GAATCT....2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACTCC--------AAACGCTACGTGGCAGA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA-AAGAACTCC--------AAACGCT............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCC--------AAACGCTACGTGGCAGAGGC-----GA........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTCC--------AAACGCTACGTGGCAGAGG................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCC--------AAACGCTACGTGGCAGAGG................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTCC--------AAACGCTACGTGGCAGA..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-AAGAACTCC--------AAACGCTACG.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-AAGAACTCC--------AAACGCTACGTGGCA....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGAACTCC--------AAACGCTACGTGGCAGAGG................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-AAGAACTCC--------AAACGCTACGT........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCTACGTGGCAGAGGC-----..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTCC--------AAACGCTACGTGG......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GAATAAATTCTAGTATTAATGT...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACGTGGCAGAGGC-----GAATCACCGG2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCC--------AAACGCTACGTGGCAGAGGC-----GAAA......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGGCAGAGGC-----GAATCACCG.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACGTGGCAGAGGC-----GAA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TC-A---------------------------------------------------------------------------------------------------------GTGTCAGT------------------------------------------------------GAATAAAT.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------CAGA-AAGAACTCC--------AAACGC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTATTTTCAATGTAATG-CAAAA-------------------------------------------------------------------------------TTACCAAAACCTGTCGGAGG------------------------------------------------------GAACAAATACTAGTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATGGTCTTTAACCTATTTTTTT-----GGGG-TTT----TT--TCATACATTTATTG----------CCGCCACTGTT-TTATGACCGTTTCCCTTTTCT-----TACTTGCAGTGATATT----------------CAGA-AAGAACTCC--------AAAAGCTACGTGGCAGAGGC-----GAATCACCGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATT----------------CAGA-AAGAACTCC--------AAAAG..............................2411.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATATT----------------CAGA-AAGAACTCC--------AAAAGC.............................2711.0011000000
droYak3
CCATTTTAAATGTAATG-CAAAA-------------------------------------------------------------------------------TTGCCAAAACCAGTGGCAGT------------------------------------------------------CAAAAAATACTAGTATTAATTTACAATATTTTTCCAGTAATGCAG---------------------------------------------------------------------------------AA-AT-------AGT------TA---T-TCATAATAAAAATAT------------------------GGTCCTAAACGTATTTCTTT-----GGGT--TTTTTTTT--TTACATATTTACTG----------TCGACATTGTT-GTATGACCGTTTCCATTCTCT-----TACTTGCAGTGATATT----------------CAGA-AAGAACTCC--------AAAAGCTACGTGGCAGAGAC-----GACTCAACGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------CAGA-AAGAACTCC--------AAAAGCT............................2111.00110000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACGTGGCAGAGAC-----GA........1911.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTTCCATTCTCT-----TACTTGC..................................................................................2211.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCC--------AAAAGCTACGTGGCA....................2111.00101000000000
droEug1
GGAATGAC--T-TGAAG-TAAAATAGAACCATGATAGTAAC-------------------------------------------------------------TTAGT--------------------------------------------------------------------------AACTCAGTCATGAGCTTATA---------------------------------------------------------------------------------CTTATTTCCAATAAACACAGAAGTTTAAAAATAGCTTGCTTTATACTT-CAG---GAAAATAAAGTCTGAAAATGAGTGCTTGATGTGTTCCTTAACTAAAACTTCC-----AGT--------------TCTTTAAA--TTA----------CATATGCAGTT-TGATGACCGATTCCTTTTCCT-----TACTTACAGTTATATC----------------CATA-AAGAACTCC--------AAAAGCTACGTGGCAGAGGT-----GAATCACCGGSizeHit CountTotal NormTotal
No Reads
droBia1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTTTCT-----TATTTACAGTGATATC----------------CAAA-AAGAAGTTA--------AAAAGTTACGTGGCACAGGC-----GAATCACCGGSizeHit CountTotal NormTotal
No Reads
droTak1
ATTATGT-ACTGGAAAT-CA-------------------------------------------------------------------------------------TTAAAAGATA---AATTTCACAAATTTTTGAATTTCTACTGAAAATCTTGATTAGATTGTTTACTTTACCAGCAGAAATATTAGTATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGGACTTTAAG-------------TGGATG-GT---------------------------------TTAACATAGAT--ATTGACCGTTACCTTTCCTT-----TTTCTCCAGTTATTGC----------------CGGAAAAAAACTAC--------AAAAGCGACGTGGCAGAGGC-----GAATCACCGGSizeHit CountTotal NormTotal
No Reads
droEle1
TAATATTCAAAACAAAT-AAATA---------------------------------TTTTGTTC-T-TAGCT----AAAGTCGACAGTTATTTAATAGAATATTAGCAAAGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTG-CAG---GAAAA-AAGGTTAAATTTAGAATTCTTAAAATATACTTA----------------GAAGAG-ACT----CT--TTATTAACTTGTTTT---------TCAACGCAGTTTTGATGACCGTTTCCTTCTCTT-----TATTTACAGTGATATC----------------CAGA-AAAAACTCC--------GGGAGTTACGTGGCAGACGT-----GAATTACCGGSizeHit CountTotal NormTotal
No Reads
droRho1
ACGTTGTCAAATTT--AATGAAT-----CCAATGAAATCTCTTCATTCAATAAATATATGTTTCCTTACGCTTAAAAAATACGACAG--ATTTCATAAAAAAACAAAAGGGTC----------------------------------------------------------------------------------------------------------------------------------------------------TTA------------------------------------------TTGAAATTTGTAAACTATAGCCCT-CAA---AAGAAAGAA----------------------------TTTTGTTGAATATATAAATAAGTG-CCT----TT--TAATGTACTTGGTA----------CCAACCTAGTT--TATAATCGTTTTCT---TTT-----TATTTACAGTGCTTTC----------------CAGA-AAGAACTCC--------AGGAGCTACGTGGCGGACGC-----GAATCACTGGSizeHit CountTotal NormTotal
No Reads
droFic1
TTGTTCATAAATAA--TAAGAAT-------------------------------------------------------------------------------CTCTTAAATGAGTTTAAAAC----------------------------------------------------------------TA----------------TCATTAAAGTATCGCTGAATAATAGAAAATTCCTAAATTCATCAACTAAATTGGGTCTTTTATTTATCATTGATAGGAGTTATTTGCTTTAAACGCTT---------------------TAGTTTT-GCA---AAAAAAAAA----------------------------ATAACTTATGCATTTGAGAAGTTG-GTT----CCTTTTGTTCATT--TTA----------CTTACTCAGTT-AAATTAACATTTTGTTTCTCT-----CACTTACAGTGACATC----------------AAAA-AAGAAGTCC--------AAGAGTAACGTGGCAGAGGC-----GAAACACCGGSizeHit CountTotal NormTotal
No Reads
droKik1
TTATTTTAAACACAT-T-AAAAT-------------------------------------------------------------------------------CTACTGAAATTGTTACCAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACGTC------------------TT-ATACAACA-T---TTTTTCTC-----CACTTGCAGTGAAAGCCACCAAAGT-AAAATCCGGA-GACAAAGAG--------GAGCCACACGTGCCAGAGGA-----AATCTATAAGSizeHit CountTotal NormTotal
No Reads
droAna3
ACATTATTAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTC-TAATAACCATTTC-TCCCTCT-----TACTTGCAGTGGAATCTA----AAA-AAAAACAGAAGAAGAACTCCAAGAGGC--AGAGCTACGTGGCAGATGC-----GGAGAACC--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTACGTGGCAGATGC-----GGA.......2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGAACTCCAAGAGG.....................................1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAGAAGAAGAACTCCAAGA.......................................2311.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGAAGAACTCCAAGAGGC--AGAGCT............................2711.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-AAAAACAGAAGAAGAA...............................................1920.501000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----AAA-AAAAACAGAAGAAGA................................................1930.331010000
droBip1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCATTTTCTGTTTTT-----TATTTGCAGTGGAATC----------------CAAA-GAGA-----------------ACTACGTGGCAGATGC-----GGAAAAGCAGSizeHit CountTotal NormTotal
No Reads
dp5
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------ACGCACGACGTGGCATAAGCAAAGAGAAACACTGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG-ATT----TC--TTATTGGCATATTTCTTCCGCTAACAAA-TTAATT-TAACAATTGATTCCATTCGTT----TTGCTTGCAGTTGGCGTACCTTAAGATACAAATAGCAGCAGAGCTGG-AGAGACCACGCACGACGTGGCATAAGCAAAGAGAAACACTGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droMoj3
TTCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCCTTTCT-G-----TTTTTGCAGTGATTGCCGTTTG----C-----CGAA-CGGAACTGC--------GACTGCGACGTGGCAGCGCT-AGAGGAGACAGCGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/18/2015 at 09:54 AM