ID:

dsi_14980

 Coordinate:

3l:24221199-24221348 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.9 -19.7 -19.5 -19.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(TA)nSimple_repeatSimple_repeat+
DNAREP1_DMRCHelitron-
mature
  1. dsi_2170  2r:2294049-2294072 +
  2. dsi_14980  3l:24221287-24221310 -
star
  1. 2l:20747293-20747315 +
  2. 2r:1791694-1791716 +
  3. dsi_2170  2r:2294132-2294154 +
  4. 3l:22444500-22444522 +
  5. 3l:22448150-22448172 -
  6. dsi_14980  3l:24221205-24221227 -

Sense Strand Reads

AGAATTTGCTACTATCATTTTACGTTGGAATACTACACAGTATTAGGAGCGTAAGTATTTAAAATTCCAAAATTTTTTCCTATTTTAATAGGCAGTTTTTATACCCGTTACTCGTTGATTGAAAGATTATACCAGATTCTATATATATATATATATATATATATATATATCACATACTTTTCAACGAATCTGGTATAACCAGATAACCAGATCAATAGCCGAGTCGATCATATACGTCTCTCCATATGAA
****************************************************************************************...((((................(((((((...((((..(((....(((..((((((((((((....)))))))))))).)))..))))))))))))))..)).))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M023
head
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
........................................................................................TAGGCAGTTTTTATACCCGTTACT.......................................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0 0 0
................ATTTTACGTTGGAATACTACACAGTATT.............................................................................................................................................................................................................. 28 0 2 0.50 1 0 0 1 0 0 0 0
..................TTTACGTTGGAATACTACAC.................................................................................................................................................................................................................... 20 0 2 0.50 1 0 0 0 0 1 0 0
.....................................................................................................TACCCGTTACTCGTTGATTGAAAGATTA......................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
.................TTTTACGTTGGAATACTACAC.................................................................................................................................................................................................................... 21 0 2 0.50 1 0 0 0 1 0 0 0
...........................................................................................................................................................................ACATACTTTTCAACGAATCTGGT........................................................ 23 0 6 0.33 2 0 2 0 0 0 0 0
...........................................TGGGAGCGTAGGTATTTA............................................................................................................................................................................................. 18 2 4 0.25 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................CAGATCAAGAGCCGAGTCGATGTT................... 24 3 4 0.25 1 0 0 0 0 0 0 1
...........................................................................................................................................................................ACATACTTTTCAACGAATCTGGTATA..................................................... 26 0 4 0.25 1 0 0 0 0 0 1 0
...........................................................................................................................................................................ACATACTTTTCAACGAATCTGGTA....................................................... 24 0 6 0.17 1 0 0 0 0 0 1 0
..............TCATTTTGCGTTGGGATA.......................................................................................................................................................................................................................... 18 2 10 0.10 1 0 0 0 1 0 0 0
..................................................................................................................................................................................TTTCAACGAATCTGGTATA..................................................... 19 0 10 0.10 1 1 0 0 0 0 0 0
...........................................................................................................................................................................ACATACTTTTCAACTAATCTGGTA....................................................... 24 1 10 0.10 1 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................TAGCCGAGTCGATCAAAAA................ 19 2 11 0.09 1 0 0 1 0 0 0 0
..............................................................................................................................................................................TACTTTTCAACGAATCTGGTA....................................................... 21 0 11 0.09 1 1 0 0 0 0 0 0
..................................................................................................................................................................................TTTCAACGAATCTGGTA....................................................... 17 0 13 0.08 1 0 0 1 0 0 0 0
..........................................TTGGGAGCGTAGGTATT............................................................................................................................................................................................... 17 2 14 0.07 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................AATAGCCGAGTCGATCA.................... 17 0 16 0.06 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................CCGGCCCAATAGCCGAGTCGATCA.................... 24 3 18 0.06 1 0 1 0 0 0 0 0
............TGTCATTTTGCGTTGGGATA.......................................................................................................................................................................................................................... 20 3 18 0.06 1 0 0 0 1 0 0 0
...........................................................................................................................................................................ACATACTTTTCAAAGAATCTGGT........................................................ 23 1 20 0.05 1 0 1 0 0 0 0 0
.............GTCATTTTGCGTTGGGATA.......................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0
...............................................................................................TTTTTATACCCGTTACTCG........................................................................................................................................ 19 0 20 0.05 1 0 1 0 0 0 0 0
................................................................................................TTTTATACCCGTTACTCGT....................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0

Anti-sense strand reads

TCTTAAACGATGATAGTAAAATGCAACCTTATGATGTGTCATAATCCTCGCATTCATAAATTTTAAGGTTTTAAAAAAGGATAAAATTATCCGTCAAAAATATGGGCAATGAGCAACTAACTTTCTAATATGGTCTAAGATATATATATATATATATATATATATATATAGTGTATGAAAAGTTGCTTAGACCATATTGGTCTATTGGTCTAGTTATCGGCTCAGCTAGTATATGCAGAGAGGTATACTT
********************************************************...((((................(((((((...((((..(((....(((..((((((((((((....)))))))))))).)))..))))))))))))))..)).))**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 M053
female body
 M023
head
 SRR902009
testis
.....................................................................................................................................................................................................TGGTCTATTGGTCTAGTTATCGGCT............................ 25 0 2 1.50 3 0 1 1 1 0 0 0 0 0
...............................................................................................................................ATATGGTCTAAGATATATATATATAT................................................................................................. 26 0 2 1.50 3 2 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................CTCAGCTAGTATATGCAGAGAGGTAT.... 26 0 2 1.50 3 0 3 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCGGCTCAGCTAGTATATGCAGAGAGGT...... 28 0 2 1.00 2 1 0 1 0 0 0 0 0 0
.......................................................................................................GGGCAATGAGCAACTAACTTTCTAATAT....................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................ATGGTCTAAGATATATATATATATAT............................................................................................... 26 0 2 1.00 2 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGGCTCAGCTAGTATATGCAGAGAGGT...... 27 0 2 1.00 2 0 0 2 0 0 0 0 0 0
.......................................................................................................GGGCAATGAGCAACTAACTTT.............................................................................................................................. 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................ATATATAATGTATGAGAAGTTGCTT.............................................................. 25 2 4 0.50 2 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................ATATATATAATGTATGAGAAGTTGCTT.............................................................. 27 2 2 0.50 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................TTTCTCGGCTCAGCTAGTATATGC.............. 24 2 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCAGCTAGTATATGCAGAGAGGTAT.... 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................ATGGTCTAAGATATATATATATATATAT............................................................................................. 28 0 2 0.50 1 0 0 0 0 1 0 0 0 0
........................................................................................ATCCGTCAAAAATATGGGCAATGAGC........................................................................................................................................ 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................GGTCTATTGGTCTAGTTATCGGCT............................ 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0
............................................................................................................................CTAATATGGTCTAAGATATATATATAT................................................................................................... 27 0 2 0.50 1 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................CTTAGACCATATTGGTCTATTGGTCT....................................... 26 0 2 0.50 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................TGAAAAGTTGCTTAGACCATATTGGT................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
....................................................................................................................CTAACTTTCTAATATGGTCTAAGATAT........................................................................................................... 27 0 2 0.50 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................CCATATTGGTCTATTGGTCTAGTTAT................................. 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGAGCTAGTATATGCAGAGAGGTAT.... 25 1 2 0.50 1 0 0 1 0 0 0 0 0 0
..............................................................................................CAAAAATATGGGCAATGAGCAACTAAC................................................................................................................................. 27 0 2 0.50 1 0 1 0 0 0 0 0 0 0
.........................................................AAATTTTAAAGTTTTAAAAAAGGAT........................................................................................................................................................................ 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AGTTATCGGCTCAGCTAGTATATGC.............. 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCGGCTGAGCTAGTATATGCAGAGAGGT...... 28 1 2 0.50 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................CTTGCTAGTATATGCAGAGAGGTAT.... 25 3 2 0.50 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................AGACCATATTGGTCTATTGGTCTAGT.................................... 26 0 2 0.50 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................CGGCTCAGCTAGTATATGCA............. 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TGGTCTAGTTATCGGCTCAGCT....................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................TTCTAATATGGTCTAAGATATATAT....................................................................................................... 25 0 2 0.50 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................CATATTGGTCTATTGGTCTAGTTAT................................. 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................ATATATAGTGTATGAAAAGTTGCTT.............................................................. 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................TGGTCTATTGGTCTAGTTATCGGC............................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................CCTCGCATTCATAAATTTTAAGGTTTT.................................................................................................................................................................................. 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................CAGCTAGTATATGCAGAGAGGTAT.... 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0
.............................................................................AGGATAAAATTATCCGTCAAAAATAT................................................................................................................................................... 26 0 2 0.50 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................ATGGTCTAAGATATATATATAT................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................ATGGTCTAAGATATATATAT..................................................................................................... 20 0 2 0.50 1 0 0 0 1 0 0 0 0 0
...................................................................................................ATATGGGCAATGAGCAACTAACTTT.............................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ATGAAAAGTTGCTTAGACCATATTGGT................................................. 27 0 2 0.50 1 0 0 0 1 0 0 0 0 0
.....................................................................................................ATGGGCAATGAGCAACTAACTTTCTAAT......................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................TTTAAGGTTTTAAAAAAGGATAAAAT................................................................................................................................................................... 26 0 2 0.50 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................CGGCTCAGCTAGTATATGCAGAGAGGTAT.... 29 0 2 0.50 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................ATGAAAAGTTGCTTAGACCATATTG................................................... 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................TGGACTAGTTATCGGCTCAGCTAG..................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCTAGTTATCGGCTCAGCTAG..................... 21 0 7 0.29 2 0 2 0 0 0 0 0 0 0
........................................................................................................GGCAATGGGCAACTA................................................................................................................................... 15 1 12 0.25 3 0 0 1 2 0 0 0 0 0
...................................................................................................................................................................................................ATTGGTCTATTGGTC........................................ 15 0 4 0.25 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................ATATATAATGTATGAGAAGTTG................................................................. 22 2 5 0.20 1 1 0 0 0 0 0 0 0 0
.......................................................................................................GGGCAATGGGCAACTAA.................................................................................................................................. 17 1 5 0.20 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................AGATATATATATATATATATAGATAT....................................................................................... 26 1 20 0.15 3 0 0 0 1 2 0 0 0 0
.......................................................................................................GGGCAATGGGCAACT.................................................................................................................................... 15 1 20 0.15 3 0 0 0 3 0 0 0 0 0
......................................................................................................GGGGCAATGGGCAACTGACT................................................................................................................................ 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0
.......................................................................................................GGGCAATGGGCAACTA................................................................................................................................... 16 1 7 0.14 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................ATATATCAAATGTATGAAAAGTTGCT............................................................... 26 3 7 0.14 1 0 0 0 1 0 0 0 0 0
........................ATCCTTAGGATGTGTCTTAA.............................................................................................................................................................................................................. 20 3 8 0.13 1 0 0 0 1 0 0 0 0 0
.....................................................................................................AGGGGCAATGGGCAACTA................................................................................................................................... 18 2 20 0.10 2 0 0 0 0 1 0 1 0 0
......................................................................................................................................................................................................................TATCGGCTCAGCTAG..................... 15 0 20 0.10 2 0 2 0 0 0 0 0 0 0
..................................................................................................................................GGGTCCAAGATATATATATGT................................................................................................... 21 3 10 0.10 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................AGATATATATATATATATATATAT......................................................................................... 24 0 20 0.10 2 0 0 0 1 1 0 0 0 0
................................................................................................................................................................................GAAAAGTTGCTTAGACCA........................................................ 18 0 11 0.09 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................CTGTTGGTCTAGTGATCAG.............................. 19 3 12 0.08 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................AGATATATATATATATATATATATATAT..................................................................................... 28 0 13 0.08 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................AGATATATATATATATATATATATAT....................................................................................... 26 0 16 0.06 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TGCAGAGAGGCATACTT 17 1 17 0.06 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAGTTGCTTAGAGCATATTG................................................... 20 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AGTTATCGGCTCAGCTAG..................... 18 0 20 0.05 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTTAGTTATCGGCTCAGCTAG..................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 1
.................................................................................................AATTAGGGGCAATGGGCAACT.................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 1 0 0
......................................................................................................GGGGCAATGGGCAACTA................................................................................................................................... 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0
...................................................................................................ATATGGGCAATGAGCAGCTAA.................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................AAAAATATGGGCAATGAGCA....................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:24221149-24221398 - dsi_14980 AGAA------TTT-GCTACTATCAT------------------------------TTTACGTTGGAAT----------------------ACTA---------------------CACAGTATTAGGAGCGTA------AGTATTTAAAATTCCAAAA--------TTT--TTTCCT-------------A-TTT-TAATAGGC-----------------------AGTTTTTATACCCGTTACTCGTT--G-------AT----TGAAAGATTATA-----CCAGATTCTATA-------TA-------TATATA------------------------------------------------TATATATATATATAT---------ATATCACATACTTTTCAACGAATCTGGTATAACCAGATAACC----AGATCAATAGCCGAGTCGATC-----ATATACGTC------------TCTCCA----TATGAA
droSec2 scaffold_105:42682-42921 + AGAA------TTT-GCTACTATCAT------------------------------TTTACGTTGGAAT----------------------ACTA---------------------CACAGTATTAGGAGCGTA------AGTATTTAAAATTCCAAAA--------TTT--TTTCCT-------------A-TTT-TATTAGGC-----------------------AGTTTTTATACCCGTTACTCGTT--G-------AT----TGAAAGGTTATA-----CCAGATTCTATA-------TA-------TATAT----------------------------------------------------------ATATAT---------ATATCAAATACTTTTCAACGAATCTGGTATAACCAGATAACC----AGATCAATAGCCGAGTCGATC-----ATATACGTC------------TCTCCA----TATGAA
dm3 chr2R:1311695-1311954 + AGAA------TTT-GCTACTATCAT------------------------------TTTACGTTGGAAT----------------------ACTA---------------------CACAGTATTGGGAGCGTA------AGTATTCAAAATTCCAAAA--------TTT--TTTACTAG-AAATATTCGATTTTT-TAATAGGCAGTTT--CTATA-----------CTAT-----------------------------------------TGTATACTATTGTAGATTCGTTG-------AAA----AGTATGTAACAGGAAGAATAA---AGCATTTCCGACCATGTAAA---------------------GTATAT---------ATAT-------TCT-----------------------TAATAA---GGATCAATAGCCGAGTCGATCTCGCCATGTCCGTCTGTCTTA-----TTATTT----TATTAC
droEre2 scaffold_4929:10548926-10549164 + TTAA-----------CTAGTTTCAC------------------------------TTTTCATTGAGTG---------------------------------------------------ATATTTGTAGCAAT------GGTATTCGATATGCTATAT--------TTT--TATTATGT-----------A-TAT-AAT----------------------------TAAGTGTATACCCGTTACTCGTA--G-------AG----TAAAAGGGTATA-----CTAAATTCCTTG-------AAA----AGTATATAATGGGCAGAAAGA---ACCGTTTCCGACCATATAAA---------------------CTATTGA--------TCAG-------TAT-----------------------TGATCA---GGAACAATAGCCGAGTCGATCTGGCCATATTCGTC------------TGTCCG----AATGAA
droYak3 v2_chrUh_004:167051-167307 - TT----------T-GTTTTTATTCT-TTTAAGATT--------------------------TTAGAAA---------------------AGC-G------------------------AATATTGGG-GCAAG-GGTA-AATTTTAAACATGAGCAAT--------TTTCATTTCC--------------A--TT----------------TAACA-----------TTTTTGTATACCCGTTACTCGTA--G-------AG----TAAAAGGGTATA-----CTAGATTCGTTG-------AAA----AGTATGTAACAGGCAGAAGGA---AGGGTTTCCGACCATATAAA---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GGACCAATAGCCGAGTCGATATGACCATGTCCGTCTGTC----TGTCCGTCCG----TATGAA
droEug1 scf7180000406139:15077-15314 + AGAA------CTT-ATTTCTGTTAA------------------------------TATCTATCGATTT----------------------ACCA---------------------AAAATTTTTTAGATC-TG------AACATTTAAA-----------------------------------------TTTTT-TAACAT-------------AGCAACCTGCCTAATTTGTATACCCGTTACTCGTA--G-------AT----TAAAAGTGTATA-----C-AGATTCGTTA-------AAA----AGTATGTAACAGATAGAAGGA---AACGTTTCCGACCCTATAAA---------------------TTATAT---------ATAT-------TCT-----------------------TGATCA---GGATCAATAGCGAAGTCGATC----------CGTC--------CGTCCGTCCG----TATGAA
droBia1 scf7180000302120:4093-4365 - AGCA------GTT-GCAACTTTCAT------------------------------CTTCTTTTTCTGTAATATAG-------------------------------TCTTGAATA-ACTGTAATTGAAGCTTAGGGTG-------GAACATAAATTATTCTTTTAATTC--ATTCG--------------T--TT----CAGAC-----------------------AACTTTTATACCCGTTACTCGTA--A-------AG----TAAAAGAGTATA-----CTAGATTCGTCA-------GAA----AGTATGTAACAGGTAGAACGA---AACGTTTCCAACCTCATAAA---------------------GTATAT---------ATAT-------TCT-----------------------TAATCA---GGATTACTAGCCGAGTCGATCTAGCTATGTCCGTCTGTCCG-----CTGTCCG----TATGAA
droTak1 scf7180000415671:78605-78851 + AAC--------TT-ATTATTATCCG------------------------------ATTC-----------------------------------------CACATTTGATTGA---TAATTATT-------------------------------------------------AATTTGAAACTCTTCCAA-TTTTGCATTGGCTGAAAGGAAA-----------TGAATAATTATACCCGTTACTCGTA--G-------AG----TAAAAGGGTATA-----TTAGATTCGTGA-------AAA----AGTATGTTACAGCTAGAAGGA---AGCGTTTCCGACCCCATAAA---------------------GTATAT---------ATAA-------TCT-----------------------TGATCA---GGGGCACTAGCCGAGTCGATCTAGCCATGTCCGTC--------TGTCCGTCTG----TATGAC
droEle1 scf7180000490694:36662-36822 + AATA------TTT-ATT--------------------------------------------TTAAAAT----------------------ATTA---------------------TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTG-------AAA----AGTATGTACCCGGTAGAGGGA---AGCAATACCTATAT-----ATATATATATATATATATATATATATAT---ATATATATAT-------TCT-----------------------TGATCAATACGATCAATAGCCGAGTCGATCTTGC-GTGTC----------------CCTCTG----TATGTC
droRho1 scf7180000778513:23250-23499 + AATG------TGT-GCATATGTCCTAGCTGGCATC--------------------------TTAAAAA---------------------GAT------------------------------TAATTTGTATG------GATAAAAAAAATT---AAC--------TTA--TTCCC--------------G-TTA-TTTTAG------------T----------TTAATGTTTATACCCGTTACTCGTA--G-------AG----TGAAAGGGTATA-----TTGTATTCGTGC-------AAA----AGTATGTAACAGGTAGAAGGA---AGCGTTTCCGACCCTATAAA---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GGGTCACTAGCCGAGTCGATATAGCCATGTCCGTC--------TGTCCGTCCG----TATGAA
droFic1 scf7180000453221:34404-34462 - AGAA------TAT-GTTACTATCAT------------------------------TTTACGTTGGAGT----------------------ACTA---------------------CACTGTTCTGGGCGCGTA------AGTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000300150:20318-20375 + AGAA------TTT-GCTATTATCAT------------------------------TTTACCTTGGAAT----------------------ACTA---------------------TACCGTGCTAGGCGCGTA------AGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:22988129-22988310 - TTAA------TAG-ATAATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTATACCCGGTACTTGTA--G-------AG----TAGAATGGTATA-----TTGCATTCGTGT-------GAATCCACATATGTAATAGGGGAATTTT---AGGGGAACATACCCCATTAT---------------------GTATAT---------ATAT-------GCT-----------------------TGATCA---GAAACAATCGCCAAGTCGATTTCTGTGTGTCTGCC--------CGTCTGTCTG----TATGAA
droBip1 scf7180000395015:12622-12827 - CTACACGGAATTTGGCATTTGTT--------------------------------------CTTCCATAATATATTTAAATTATATAAAAGC-----------------------------------------------------------T-------------------------------------------------------------------------CTTATTTTTATAGCTGGTACTCGTA--G-------TG----TACAAGGGTATA-----TTGTAGTCGTGT-------GAA----TGTATG--------------------CATCTCCGACACCATAAA---------------------GTATATAACATATGTATAT-------TCT-----------------------TGATCA------TCAACGGCCGAGTCGATATAGCCATGTCCGTC------------TGTCCA----TATGAA
dp5 Unknown_group_203:8684-8928 - CATT------------------------TTGCGTT--------------------------ATAAAAA---------------------AAT-ATAATTTCACGTGTCGTGAACT-CCTAT------AACACG------GC---------------------------T--TTACGT-------------A-TTT----------------TTATA-----------ATTTTTTATACCCGATACTCAAAATT-------AA----TATAGGGGTGTA-----TTAGATTTGTGGTGAAAATAAA----TGTGTGTAACGTCCAGAATGA---AGCGTTTCTGACCCCACAAA---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GCATCAATACCCGAGTCGATTAAGTCATGTCTGTC--------CGTCCGTCCC----TATAAG
droPer2 scaffold_0:11214772-11214928 + GGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTATACCCGTTACTCAAAACG-------AG----TTTAGGGGTATA-----TTAGATTTGTGG-------------------------------TGAA---AATGTTT----CCCCATAAA---------------------GTATAT-----ACATATAT-------TCT-----------------------TGACCA---GCATCAATCGCCGAGTCGATAGAGCCATGTCTATCTGCCCGACTGTCCGTCCC----TATGAG
droWil2 scf2_1100000004585:5948486-5948718 + CT------------------TTTAT------------------------------TCTAAATTGAAAT----------------------AC-A---------------------CACAGTGCTGGG-G-------CTAACTA-CGAAAGCGCCGAAG--------TTT--CTAC---------------A-CTA----------------TTGCA-----------AGTTTTTATACCATACACCCATA--G-------GG----TGAAATGGTATA-----TTAAAGTCGCCA-------AAA----TGTATGTAACAGGCAGAAGAA---AGCATCTCCGACCCCACAAA---------------------GTATAT---------ATAT-------TAT-----------------------TGATCA---GGATCAACAACCGAGTCGATCAAGCCATGTCCGTC------------TGTCCG----TATGAA
droVir3 scaffold_12958:1190979-1191215 + ATTC----------------------------------------------------------------------------------------TG---------------------TAAAGTGTTGTAAG-------TTAAATA-TAAGGATATCTAAT--------TTC--TTTCC--------------T--TT----------------TTGTT-----------TTTTTTTATACCCTGAACCCATT--AAAAATGG-GTAATT--GTGTTTGTG-----CAAAATC----C-------AAA----TGTATGTAACAGGTAGAAGGA---AGCATCTCCGACCCCATAAA---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GCACCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCCGTCCGTCCGTATGTATGGA
droMoj3 scaffold_6473:13166014-13166232 - GCCT------------------------ATG---TATATAAAAATATTCTTTTATTA-------------------------------------------------------------------------------------------------------------TTT--TTTT---------------T-TTT----------------TTATA-----------GATTTTTATACCCTGAACCCATT--GAAAATGGAA----AATCAGGGTATA-----ATGGTTTTGTGA-------ATG--TGTGTATGTAACGGGCAGAAGGA---GTCATCGCAGACCCCATAAA---------------------GTGTAT---------ATAT-------TCT-----------------------TGATCA---GCACGAAGAGCTGAGTCGATATAGCCCTGCCCGTC--------CGTCCGTCCG----TATGAG
droGri2 scaffold_9302:572-722 + AGGA------TAT-GCTACTACCAC------------------------------TTTACTCTGGAGT----------------------ACTA---------------------CACAGTTCTGGGAGCGTA------AGTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCTCCCGAAGAAATTAACAATTTTAATACAAC---------------------------------------CTGC-------TTT-----------------------TTACCA------TTATAATCAAGATTTGTCTGACTTTATTTATT--------CATTTATTTG----AATA--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGAA------TTT-GCTACTATCAT------------------------------TTTACGTTGGAAT----------------------ACTA---------------------CACAGTATTAGGAGCGTA------AGTATTTAAAATTCCAAAA--------TTT--TTTCCT-------------A-TTT-TAATAGGC-----------------------AGTTTTTATACCCGTTACTCGTT--G-------AT----TGAAAGATTATA-----CCAGATTCTATA-------TA-------TATATA------------------------------------------------TATATATATATATAT---------ATATCACATACTTTTCAACGAATCTGGTATAACCAGATAACC----AGATCAATAGCCGAGTCGATC-----ATATACGTC------------TCTCCA----TATGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................TAGGC-----------------------AGTTTTTATACCCGTTACT............................................................................................................................................................................................................................................................2421.00200000000200000000
.......................AT------------------------------TTTACGTTGGAAT----------------------ACTA---------------------CACAGTATT......................................................................................................................................................................................................................................................................................................................................................................................2820.50100000001000000000
.......................................................TTTACGTTGGAAT----------------------ACTA---------------------CAC............................................................................................................................................................................................................................................................................................................................................................................................2020.50110000000000000000
...........................................................................................................................................................................................................................................TACCCGTTACTCGTT--G-------AT----TGAAAGATTA..............................................................................................................................................................................................................................2820.50100000000100000000
........................T------------------------------TTTACGTTGGAAT----------------------ACTA---------------------CAC............................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACATACTTTTCAACGAATCTGGT.................................................................................2360.33200000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACATACTTTTCAACGAATCTGGTATA..............................................................................2640.25100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACATACTTTTCAACGAATCTGGTA................................................................................2460.17100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAACGAATCTGGTATA..............................................................................19100.10100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TACTTTTCAACGAATCTGGTA................................................................................21110.09100000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAACGAATCTGGTA................................................................................17130.08100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCCGAGTCGATC-----A....................................17160.06100000000001000000
.....................................................................................................................................................................................................................................TTTTTATACCCGTTACTCG..........................................................................................................................................................................................................................................................19200.05100000000001000000
......................................................................................................................................................................................................................................TTTTATACCCGTTACTCGT.........................................................................................................................................................................................................................................................19200.05100000000001000000
droSec2
AGAA------TTT-GCTACTATCAT------------------------------TTTACGTTGGAAT----------------------ACTA---------------------CACAGTATTAGGAGCGTA------AGTATTTAAAATTCCAAAA--------TTT--TTTCCT-------------A-TTT-TATTAGGC-----------------------AGTTTTTATACCCGTTACTCGTT--G-------AT----TGAAAGGTTATA-----CCAGATTCTATA-------TA-------TATAT----------------------------------------------------------ATATAT---------ATATCAAATACTTTTCAACGAATCTGGTATAACCAGATAACC----AGATCAATAGCCGAGTCGATC-----ATATACGTC------------TCTCCA----TATGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
AGAA------TTT-GCTACTATCAT------------------------------TTTACGTTGGAAT----------------------ACTA---------------------CACAGTATTGGGAGCGTA------AGTATTCAAAATTCCAAAA--------TTT--TTTACTAG-AAATATTCGATTTTT-TAATAGGCAGTTT--CTATA-----------CTAT-----------------------------------------TGTATACTATTGTAGATTCGTTG-------AAA----AGTATGTAACAGGAAGAATAA---AGCATTTCCGACCATGTAAA---------------------GTATAT---------ATAT-------TCT-----------------------TAATAA---GGATCAATAGCCGAGTCGATCTCGCCATGTCCGTCTGTCTTA-----TTATTT----TATTACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................TACGTTGGAAT----------------------ACTA---------------------CACAGTATTGGGA..................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ACGTTGGAAT----------------------ACTA---------------------CACAGTATTGGGAGC................................................................................................................................................................................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCGTTG-------AAA----AGTATGTAACAGGAAGA............................................................................................................................................................................2642.2590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000010000000
............................................................GTTGGAAT----------------------ACTA---------------------CACAGTATTGGGAGC................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TTACGTTGGAAT----------------------ACTA---------------------CACAGTAT.......................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................T----------------------ACTA---------------------CACAGTATTGGGAGCTGC------.......................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCGTTG-------AAA----AGTATGTAACAGGAA..............................................................................................................................................................................2561.83110000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000001100000002000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000200000000000000000000000000
..........................................................................................................................................................................................................................................................................................TGTAGATTCGTTG-------AAA----AGTAT........................................................................................................................................................................................2121.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TTG-------AAA----AGTATGTAACAGGAAGAAT..........................................................................................................................................................................2521.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCGTTG-------AAA----AGTATGTAACAGGA...............................................................................................................................................................................2461.3380000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000006000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCGTTG-------AAA----AGTATGTAACAGGAAGAA...........................................................................................................................................................................2741.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
....................................................................................................................................................................................................................................................................................................TTG-------AAA----AGTATGTAACAGGA...............................................................................................................................................................................2071.1480000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000002000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCGTTG-------AAA----AGTATGTAACAGGA...............................................................................................................................................................................2371.1480000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000
................TACTATCAT------------------------------TTTACGTTGGAAT----------------------ACTA---------------------CAC............................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTCGCCATGTCCGT.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................T------------------------------TTTACGTTGGAAT----------------------ACTA---------------------CACAGTAT.......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ACGTTGGAAT----------------------ACTA---------------------CACAGTATTGGGATT................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTCGCCATGTCCGTCT...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................TAT-----------------------------------------TGTATACTATTGTAGATTCGTT............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATTCGATTTTT-TAATAGGCAGTTT--CTA............................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATCTCG.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TA---------------------CACAGTATTGGGAGCGTA------AGTATT.................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TAATAA---GGATCAATAGCCGAGT...............................................2311.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTTACGTTGGAAT----------------------ACTA---------------------CACAGTAT.......................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTCGCCATGTCCG..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGCCATGTCCGTCTGTCTTA-----................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATAA---GGATCAATAGCCGAGTCGATC..........................................2531.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.........................................................................................................................................................................................TTCGATTTTT-TAATAGGCAGTTT--CTA............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TATTGTAGATTCGTTG-------AAA----AGTATGTA.....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGTAAA---------------------GTATAT---------ATAT-------TCT-----------------------TAATAA---GGA............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TTG-------AAA----AGTATGTAACAGGAAGAATAA---A....................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCGTTG-------AAA----AGTATGTAACAGGAAGAA...........................................................................................................................................................................2831.0030000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATCTCGCC.....................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................A----AGTATGTAACAGGAAGAATAA---AGCATT...............................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AATAA---GGATCAATAGCCGAGTCGATC..........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TATGTAACAGGAAGAATAA---AGCATT...............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------------------TAATAA---GGATCAATAGCCGAT................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............T-GCTACTATCAT------------------------------TTTACGTTGGAAT----------------------AC......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................A----AGTATGTAACAGGAAGAATAA---AGCAT................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTGGAAT----------------------ACTA---------------------CACAGTATTGGGAGC................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AA----AGTATGTAACAGGAAGAATAA---AGCA.................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................ACTATTGTAGATTCGTTG-------AAA----AGTATG.......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............GCTACTATCAT------------------------------TTTACGTTGGAAT----------------------AC......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CGTTGGAAT----------------------ACTA---------------------CACAGTATTGGGA..................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CTA---------------------CACAGTATTGGGAGCTG..............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................AGTATTGGGAGCGTA------AGTATTCAA..............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................T----------------------ACTA---------------------CACAGTATTGGGAGCGTA------AG.....................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................T----------------------ACTA---------------------CACAGTATTGGGAGC................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................ACTA---------------------CACAGTATTGGGAGCAA..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGCCATGTCCGTCTGTCTTA-----T...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TAA---AGCATTTCCGACCATGTAAA---------------------GTA.........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTTACGTTGGAAT----------------------ACTA---------------------CACC...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................................................................TGTAACAGGAAGAATAA---AGCATTTCCGAC.........................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATCTCGCCATGTCCG..............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CATTTCCGACCATGTAAA---------------------GTATAT---------ATA..........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCGTTG-------AAA----AGTATGTAACAGGAA..............................................................................................................................................................................2470.7150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCGTTG-------AAA----AGTATGTAACAGGAAGA............................................................................................................................................................................2730.6720000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCGTTG-------AAA----AGTATGTAACAGG................................................................................................................................................................................23200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021100100000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A---GGATCAATAGCCGAGTCGAT...........................................21200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000200000000010000000000000000000000000000000000000010100000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................ATTGTAGATTCGTTG-------AAA----AGT..........................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TATTGTAGATTCGTTG-------AAA----AGG..........................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ATACTATTGTAGATTCGTTG-------A...................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................................................................................................................................................................................GTAACAGGAAGAATAA---AA...................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GTATACTATTGTAGATTCGTTG-------AAA----AG...........................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TGTAGATTCGTTG-------AAA----AGTA.........................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TACTATTGTAGATTCGTTG-------AAA----AG...........................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GTATACTATTGTAGATTCGTTA-------....................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TATACTATTGTAGATTCGTTG-------....................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCGTTG-------AAA----AGTATGTAACAGGAAGAAT..........................................................................................................................................................................2920.5010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TATTGTAGATTCGTTG-------AAA----AGT..........................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A---GGATCAATAGCCGAGTCGATC..........................................22200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TTG-------AAA----AGTATGTAACAGGAA..............................................................................................................................................................................2170.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCGTTG-------AAA----AGTATGTAACAGGAAG.............................................................................................................................................................................2550.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TTTCCGACCATGTAAA---------------------GTATAT---------ATA..........................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TAA---GGATCAATAGCCGAGTCGATC..........................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CGTTG-------AAA----AGTATGTAACAGG................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000200000000000000000000000010000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................TTCCGACCATGTAAA---------------------GTATAT---------ATAT-------TC................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCGTTG-------AAA----AGTATGTAACAGGAAGAAA..........................................................................................................................................................................28120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TG-------AAA----AGTATGTAACAGGAAGA............................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATAA---GGATCAATAGCCGAGT...............................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AA---GGATCAATAGCCGAGTCGA............................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TCCGACCATGTAAA---------------------GTATAT---------ATAT-------TC................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TTCCGACCATGTAAA---------------------GTATAT---------ATA..........................................................................................................2440.2510000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TTG-------AAA----AGTATGTAACAGGAAGA............................................................................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AA---GGATCAATAGCCGAGTCGAT...........................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCGTTG-------AAA----AGTATGTAACAGG................................................................................................................................................................................22200.2040000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A---GGATCAATAGCCGAGTCGATCT.........................................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TTG-------AAA----AGTATGTAACAGGAAG.............................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A---GGATCAATAGCCGAGTCG.............................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A---GGATCAATAGCCGAGTC..............................................18200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TAGATTCGTTG-------AAA----AGTATGTAACAGG................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCGTTG-------AAA----AGTATGTAACA..................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000020000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GTTG-------AAA----AGTATGTAACAGGAA..............................................................................................................................................................................2270.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCGTTG-------AAA----AGTATGTAACAG.................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCGTTG-------AAA----AGTATGTAACAGGAAGG............................................................................................................................................................................26100.1010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AGATTCGTTG-------AAA----AGTATGTA.....................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A---GGATCAATAGCCGAGTCGA............................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCGTTG-------AAA----AGTATGTAACAGGAT..............................................................................................................................................................................25120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droEre2
TTAA-----------CTAGTTTCAC------------------------------TTTTCATTGAGTG---------------------------------------------------ATATTTGTAGCAAT------GGTATTCGATATGCTATAT--------TTT--TATTATGT-----------A-TAT-AAT----------------------------TAAGTGTATACCCGTTACTCGTA--G-------AG----TAAAAGGGTATA-----CTAAATTCCTTG-------AAA----AGTATATAATGGGCAGAAAGA---ACCGTTTCCGACCATATAAA---------------------CTATTGA--------TCAG-------TAT-----------------------TGATCA---GGAACAATAGCCGAGTCGATCTGGCCATATTCGTC------------TGTCCG----AATGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATCTGGCCATAT.................................23100.1011000000
.........................................................................................................................................................................................................................................TATACCCGTTACTCGTA--G-------AG----T.......................................................................................................................................................................................................................................21200.0510001000
droYak3
TT----------T-GTTTTTATTCT-TTTAAGATT--------------------------TTAGAAA---------------------AGC-G------------------------AATATTGGG-GCAAG-GGTA-AATTTTAAACATGAGCAAT--------TTTCATTTCC--------------A--TT----------------TAACA-----------TTTTTGTATACCCGTTACTCGTA--G-------AG----TAAAAGGGTATA-----CTAGATTCGTTG-------AAA----AGTATGTAACAGGCAGAAGGA---AGGGTTTCCGACCATATAAA---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GGACCAATAGCCGAGTCGATATGACCATGTCCGTCTGTC----TGTCCGTCCG----TATGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................T-------TCT-----------------------TGATCA---GGACCAATAGCCGAG................................................25200.9018000180000000
.........................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGA---AGGGTTTCCG...........................................................................................................................................................27200.7014014000000000
.................................................................................................................................................................................................................................................................................................................................GCAGAAGGA---AGGGTTTCCGACCATAT....................................................................................................................................................26200.25500500000000
..............................................................TAGAAA---------------------AGC-G------------------------AATATTGGG-GCAAG-GG..........................................................................................................................................................................................................................................................................................................................................................................26200.20404000000000
............................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGA---AGGGTTTCCGACC........................................................................................................................................................27200.15303000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TGATCA---GGACCAATAGCCGAGTCG.............................................25200.10200020000000
...........................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGA---AGGGT................................................................................................................................................................20200.10200000020000
...................................................................................................................................................................................................................................................ACTCGTA--G-------AG----TAAAAGGGTATA-----CT.....................................................................................................................................................................................................................24200.10202000000000
.......................................................................................................................................................................................................................................TGTATACCCGTTACTCGTA--G-------AG----TA......................................................................................................................................................................................................................................24160.06100100000000
.......................................................................................................................................................................................................................................TGTATACCCGTTACTCGTA--G-------AG----TAA.....................................................................................................................................................................................................................................25160.06100100000000
.....................................................................................................................................................................................................................................TTTGTATACCCGTTACTCGTA--G-------AG----........................................................................................................................................................................................................................................24170.06101000000000
...................................................................................................................................................................................................................................................................................................GTTG-------AAA----AGTATGTAACAGGCAG.............................................................................................................................................................................23200.05101000000000
..............................................................TAGAAA---------------------AGC-G------------------------AATATTGGG-G.................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
..............................................................................................................................................................................................................................................................................................................................CAGGCAGAAGGA---AGGGTTTCCGACCAT......................................................................................................................................................27200.05100000010000
..............................................................TAGAAA---------------------AGC-G------------------------AATATTGGG-GCAAG-............................................................................................................................................................................................................................................................................................................................................................................24200.05100100000000
..........................................................................................GC-G------------------------AATATTGGG-GCAAG-GG..........................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
............................TAAGATT--------------------------TTAGAAA---------------------AGC-G------------------------AATATTGG....................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
........................................................................................................................................................................................................................................GTATACCCGTTACTCGTA--G-------AG----........................................................................................................................................................................................................................................21200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATAT-------TCT-----------------------TGATCA---GGACCAATAGCCGAGT...............................................29200.05100100000000
droEug1
AGAA------CTT-ATTTCTGTTAA------------------------------TATCTATCGATTT----------------------ACCA---------------------AAAATTTTTTAGATC-TG------AACATTTAAA-----------------------------------------TTTTT-TAACAT-------------AGCAACCTGCCTAATTTGTATACCCGTTACTCGTA--G-------AT----TAAAAGTGTATA-----C-AGATTCGTTA-------AAA----AGTATGTAACAGATAGAAGGA---AACGTTTCCGACCCTATAAA---------------------TTATAT---------ATAT-------TCT-----------------------TGATCA---GGATCAATAGCGAAGTCGATC----------CGTC--------CGTCCGTCCG----TATGAASizeHit CountTotal NormTotal
No Reads
droBia1
AGCA------GTT-GCAACTTTCAT------------------------------CTTCTTTTTCTGTAATATAG-------------------------------TCTTGAATA-ACTGTAATTGAAGCTTAGGGTG-------GAACATAAATTATTCTTTTAATTC--ATTCG--------------T--TT----CAGAC-----------------------AACTTTTATACCCGTTACTCGTA--A-------AG----TAAAAGAGTATA-----CTAGATTCGTCA-------GAA----AGTATGTAACAGGTAGAACGA---AACGTTTCCAACCTCATAAA---------------------GTATAT---------ATAT-------TCT-----------------------TAATCA---GGATTACTAGCCGAGTCGATCTAGCTATGTCCGTCTGTCCG-----CTGTCCG----TATGAASizeHit CountTotal NormTotal
No Reads
droTak1
AAC--------TT-ATTATTATCCG------------------------------ATTC-----------------------------------------CACATTTGATTGA---TAATTATT-------------------------------------------------AATTTGAAACTCTTCCAA-TTTTGCATTGGCTGAAAGGAAA-----------TGAATAATTATACCCGTTACTCGTA--G-------AG----TAAAAGGGTATA-----TTAGATTCGTGA-------AAA----AGTATGTTACAGCTAGAAGGA---AGCGTTTCCGACCCCATAAA---------------------GTATAT---------ATAA-------TCT-----------------------TGATCA---GGGGCACTAGCCGAGTCGATCTAGCCATGTCCGTC--------TGTCCGTCTG----TATGACSizeHit CountTotal NormTotal
No Reads
droEle1
AATA------TTT-ATT--------------------------------------------TTAAAAT----------------------ATTA---------------------TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTG-------AAA----AGTATGTACCCGGTAGAGGGA---AGCAATACCTATAT-----ATATATATATATATATATATATATATAT---ATATATATAT-------TCT-----------------------TGATCAATACGATCAATAGCCGAGTCGATCTTGC-GTGTC----------------CCTCTG----TATGTCSizeHit CountTotal NormTotal
No Reads
droRho1
AATG------TGT-GCATATGTCCTAGCTGGCATC--------------------------TTAAAAA---------------------GAT------------------------------TAATTTGTATG------GATAAAAAAAATT---AAC--------TTA--TTCCC--------------G-TTA-TTTTAG------------T----------TTAATGTTTATACCCGTTACTCGTA--G-------AG----TGAAAGGGTATA-----TTGTATTCGTGC-------AAA----AGTATGTAACAGGTAGAAGGA---AGCGTTTCCGACCCTATAAA---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GGGTCACTAGCCGAGTCGATATAGCCATGTCCGTC--------TGTCCGTCCG----TATGAASizeHit CountTotal NormTotal
No Reads
droFic1
AGAA------TAT-GTTACTATCAT------------------------------TTTACGTTGGAGT----------------------ACTA---------------------CACTGTTCTGGGCGCGTA------AGTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGAA------TTT-GCTATTATCAT------------------------------TTTACCTTGGAAT----------------------ACTA---------------------TACCGTGCTAGGCGCGTA------AGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTAA------TAG-ATAATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCTATACCCGGTACTTGTA--G-------AG----TAGAATGGTATA-----TTGCATTCGTGT-------GAATCCACATATGTAATAGGGGAATTTT---AGGGGAACATACCCCATTAT---------------------GTATAT---------ATAT-------GCT-----------------------TGATCA---GAAACAATCGCCAAGTCGATTTCTGTGTGTCTGCC--------CGTCTGTCTG----TATGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................ATACCCGGTACTTGTA--G-------AG----T.......................................................................................................................................................................................................................................2090.111100000
droBip1
CTACACGGAATTTGGCATTTGTT--------------------------------------CTTCCATAATATATTTAAATTATATAAAAGC-----------------------------------------------------------T-------------------------------------------------------------------------CTTATTTTTATAGCTGGTACTCGTA--G-------TG----TACAAGGGTATA-----TTGTAGTCGTGT-------GAA----TGTATG--------------------CATCTCCGACACCATAAA---------------------GTATATAACATATGTATAT-------TCT-----------------------TGATCA------TCAACGGCCGAGTCGATATAGCCATGTCCGTC------------TGTCCA----TATGAASizeHit CountTotal NormTotal
No Reads
dp5
CATT------------------------TTGCGTT--------------------------ATAAAAA---------------------AAT-ATAATTTCACGTGTCGTGAACT-CCTAT------AACACG------GC---------------------------T--TTACGT-------------A-TTT----------------TTATA-----------ATTTTTTATACCCGATACTCAAAATT-------AA----TATAGGGGTGTA-----TTAGATTTGTGGTGAAAATAAA----TGTGTGTAACGTCCAGAATGA---AGCGTTTCTGACCCCACAAA---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GCATCAATACCCGAGTCGATTAAGTCATGTCTGTC--------CGTCCGTCCC----TATAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................ATTTGTGGTGAAAATAAA----T............................................................................................................................................................................................1912.0020000000020
..................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TGATCA---GCATCAATACCCGAGT...............................................2351.8090720000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TGATCA---GCATCAATACCCGAGTCG.............................................2551.2060500001000
..................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TGATCA---GCATCAATACCCGAGTC..............................................2451.2060600000000
......................................................................................................................................................................................................................TA-----------ATTTTTTATACCCGATACTCAAAATT-------..............................................................................................................................................................................................................................................2811.0010100000000
................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATAAA----TGTGTGTA.....................................................................................................................................................................................2511.0010000000010
................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATAAA----TGTGTGTAAC...................................................................................................................................................................................2711.0010100000000
...............................................................................................................................................................................................................................................CGATACTCAAAATT-------AA----TATAGGGGTG..............................................................................................................................................................................................................................2611.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TGATCA---GCATCAATACCCGAG................................................2260.8350500000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TGATCA---GCATCAATACCCGAGTCGAT...........................................2740.2510000001000
.....................................................................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAATGA---.....................................................................................................................................................................2150.2010100000000
..............................................................................................................................................................................................................................................................................................................AAA----TGTGTGTAACGTCCAGAA...........................................................................................................................................................................2150.2010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TGATCA---GCATCAATACCCGAGTCGA............................................2650.2010100000000
.......................................................................................................................................................................................................................A-----------ATTTTTTATACCCGATACTCAAAA.......................................................................................................................................................................................................................................................2570.1410000000100
............................................................................................................................................................................................................................................................................TAGGGGTGTA-----TTAGATTTGTGG...........................................................................................................................................................................................................2290.1110000001000
..........................................................................................................................................................................................................................................................................TATAGGGGTGTA-----TTAGATTTGT.............................................................................................................................................................................................................22100.1010000001000
.................................................................................................................................................................................................................................................................................GTGTA-----TTAGATTTGTGGTGAA.......................................................................................................................................................................................................21110.0910100000000
...........................................................................................................................................................................................................................................................................ATAGGGGTGTA-----TTAGATTTGT.............................................................................................................................................................................................................21120.0810000001000
.....................................................................................................................................................................................................................................TTTTTATACCCGATACTCAAAATT-------..............................................................................................................................................................................................................................................24160.0610000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TGATCA---GCATCAATACCCGAGTCGTC...........................................27200.0510100000000
droPer2
GGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTATACCCGTTACTCAAAACG-------AG----TTTAGGGGTATA-----TTAGATTTGTGG-------------------------------TGAA---AATGTTT----CCCCATAAA---------------------GTATAT-----ACATATAT-------TCT-----------------------TGACCA---GCATCAATCGCCGAGTCGATAGAGCCATGTCTATCTGCCCGACTGTCCGTCCC----TATGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTCGATAGAGCCATG..................................18200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATAGAGCCATG..................................20200.051000001
droWil2
CT------------------TTTAT------------------------------TCTAAATTGAAAT----------------------AC-A---------------------CACAGTGCTGGG-G-------CTAACTA-CGAAAGCGCCGAAG--------TTT--CTAC---------------A-CTA----------------TTGCA-----------AGTTTTTATACCATACACCCATA--G-------GG----TGAAATGGTATA-----TTAAAGTCGCCA-------AAA----TGTATGTAACAGGCAGAAGAA---AGCATCTCCGACCCCACAAA---------------------GTATAT---------ATAT-------TAT-----------------------TGATCA---GGATCAACAACCGAGTCGATCAAGCCATGTCCGTC------------TGTCCG----TATGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................TAAATTGAAAT----------------------AC-A---------------------CACAGTGCTGGG-G-------C.........................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCAAGCCATGTCCGTC------------TG..............2121.00200020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAAGCCATGTCCGTC------------TGTC............2220.50101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGCCATGTCCGTC------------TGTC............2120.50101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCAAGCCATGTCCGTC------------T...............2120.50101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCAAGCCATGTCCGTC------------T...............2020.50101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCCATGTCCGTC------------TGTCC...........2020.50101000
.....................................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGAA---AGCA.................................................................................................................................................................25200.40800080
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACAACCGAGTCGATCAAGCCATG..................................2630.33100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---GGATCAACAACCGAGTCGATCA.........................................2530.33101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAAGCCATGTCCGTC------------TG..............2040.25101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACCGAGTCGATCAAGCCATGT.................................2540.25100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATCAAGCCATGTCCGT.............................2140.25100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCGAGTCGATCAAGC......................................1950.20100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACCGAGTCGATCAAGCC.....................................2150.20101000
.....................................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGAA---AGCATC...............................................................................................................................................................27200.15300030
...................................................................................................................................................................................................................................................ACCCATA--G-------GG----TGAAATGGTATA-----TTAAAG.................................................................................................................................................................................................................28200.15303000
............................................................................................................................................................................................................................................................................AAATGGTATA-----TTAAAGTCGCC............................................................................................................................................................................................................21200.10200002
..........................................................................................................................................................................................................................................................................TGAAATGGTATA-----TTAAAGTCG..............................................................................................................................................................................................................21200.10200200
.............................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGAA---AGCATCTC.............................................................................................................................................................21200.10200020
...........................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGAA---AGCATCTC.............................................................................................................................................................23200.10200020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCATGTCCGTC------------TGTCCG----T.....21140.07100010
.......................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGAA---AGCATCTC.............................................................................................................................................................27200.05100010
...........................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGAA---AGCATCTCCGACCC.......................................................................................................................................................29200.05101000
...................................................................................................................................................................................................................................................ACCCATA--G-------GG----TGAAATGGTATA-----TTAAA..................................................................................................................................................................................................................27200.05101000
......................................................................................................................................................................................................................................................CATA--G-------GG----TGAAATGGTATA-----TTAA...................................................................................................................................................................................................................23200.05101000
.................................................................................................................................................................................................................................................................................................................................GCAGAAGAA---AGCATCTCCGACCCC......................................................................................................................................................24200.05100010
.........................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGAA---AGCATCTCC............................................................................................................................................................26200.05100010
...........................................................................................................................................................................................................................................................................................TTAAAGTCGCCA-------AAA----TGTATG.......................................................................................................................................................................................21200.05110000
.....................................................................................................................................................................................................................................................................................................CA-------AAA----TGTATGTAACAGG................................................................................................................................................................................18200.05100010
......................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGAA---.....................................................................................................................................................................20200.05100100
.......................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGAA---AGCATC...............................................................................................................................................................25200.05100010
.........................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGAA---AGCATCTC.............................................................................................................................................................25200.05100010
........................................................................................................................................................................................................................................................................................................................................AA---AGCATCTCCGACCCCACA...................................................................................................................................................20200.05101000
..............................................................................................................................................................................................................................................................................................................................CAGGCAGAAGAA---AGCATCTCC............................................................................................................................................................21200.05100010
.......................................................................................................................................................................................................................................................................................................................................GAA---AGCATCTCCGACCCCACAAA---------------------GTATA.......................................................................................................................28200.05101000
....................................................................................................................................................................................................................................................................................TA-----TTAAAGTCGCCA-------AAA----TGTATGTAACA..................................................................................................................................................................................28200.05110000
.....................................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGAA---AGCATCT..............................................................................................................................................................28200.05101000
droVir3
ATTC----------------------------------------------------------------------------------------TG---------------------TAAAGTGTTGTAAG-------TTAAATA-TAAGGATATCTAAT--------TTC--TTTCC--------------T--TT----------------TTGTT-----------TTTTTTTATACCCTGAACCCATT--AAAAATGG-GTAATT--GTGTTTGTG-----CAAAATC----C-------AAA----TGTATGTAACAGGTAGAAGGA---AGCATCTCCGACCCCATAAA---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GCACCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCCGTCCGTCCGTATGTATGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................TGTAAG-------TTAAATA-TAAGGATATCTAA.....................................................................................................................................................................................................................................................................................................................................................262010.75215000080100000000000000000001436100000000000200000000000000000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAAATA-TAAGGA............................................................................................................................................................................................................................................................................................................................................................27204.10820000300000510000000000007300000000000000000000000000000000000000
...........................................................................................................................TGTAAG-------TTAAATA-TAAGGATATCTAAT--------T...........................................................................................................................................................................................................................................................................................................................................28203.106200000000000010000000000000000000290030000000001000010000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAGGTAGAAGG.........................................................................................................................................................................26202.75550001001010010000000000005611441102096200000000000000000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAGGTAGAAG..........................................................................................................................................................................25201.4028002000000000000000000000636301111004000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAGGTAGAAGGA---.....................................................................................................................................................................27201.40280000000000000000000000001052210020100410000000000000000000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAAATA-TAAGG.............................................................................................................................................................................................................................................................................................................................................................26201.20240000000020000000000000000000000060000160000000000000000000000000
........................................................................................................................................................................................................................................................TT--AAAAATGG-GTAATT--GTGTTTG..............................................................................................................................................................................................................................2311.001000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................TT--AAAAATGG-GTAATT--GTGTTTGTG-----T......................................................................................................................................................................................................................2611.001000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TT--AAAAATGG-GTAATT--GTGTTTGTG-----C......................................................................................................................................................................................................................2611.001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------------------TGATCA---GCACCAATAGCCGAGTCG.............................................27200.90180000000000000000000000000000001000170000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................T---------ATAT-------TCT-----------------------TGATCA---GCACCAATAGCC...................................................26200.8016000000000000000000000000800050030000000000000000000000000000000
...........................................................................................................................TGTAAG-------TTAAATA-TAAGGATATCTAAT--------............................................................................................................................................................................................................................................................................................................................................27200.75150000000000000000000000000000000000000140000000000000010000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAAATA-TAA...............................................................................................................................................................................................................................................................................................................................................................24200.7014000001000000000000000000700040001010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................T---------ATAT-------TCT-----------------------TGATCA---GCACCAATAGC....................................................25200.6513000000000000000000000000200209000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTATGTAACAGGTAGAAGGA---AGCATC...............................................................................................................................................................26200.5511000000002000100000000000020101010030000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAGGTAGAAGGA---A....................................................................................................................................................................28200.459000000000000000000000000002200101030000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAGGTAGA............................................................................................................................................................................23200.408000000000000000000000000013200001010000000000000000000000000000
.TTC----------------------------------------------------------------------------------------TG---------------------TAAAGTGTTGTAAG-------TTAAATA-..................................................................................................................................................................................................................................................................................................................................................................26200.357002000000000000000000000500000000000000000000000000000000000000
....................................................................................................................AAAGTGTTGTAAG-------TTAAATA-TAAGGA............................................................................................................................................................................................................................................................................................................................................................26200.357000000000010100000000000040000100000000000000000000000000000000
....................................................................................................................AAAGTGTTGTAAG-------TTAAATA-TAAGG.............................................................................................................................................................................................................................................................................................................................................................25200.357007000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTAGCCATGTCCGTCTG..........................22200.306003000000000000000000000000000000000000300000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTAGCCATGTCCGTCTG..........................21200.306000000000000000000000000000060000000000000000000000000000000000
..........................................................................................................................TTGTAAG-------TTAAATA-TAAGGATATCTAA.....................................................................................................................................................................................................................................................................................................................................................27200.306003000000000000000000000000300000000000000000000000000000000000
..TC----------------------------------------------------------------------------------------TG---------------------TAAAGTGTTGTAAG-------TTAAATA-..................................................................................................................................................................................................................................................................................................................................................................25200.306000000000000000000000000040002000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAGGTA..............................................................................................................................................................................21200.306000000000000000000000000100110010020000000000000000000000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAAATA-TA................................................................................................................................................................................................................................................................................................................................................................23200.306004000000000000000000000000000010001000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-------TCT-----------------------TGATCA---GCACCAATAGCCGA.................................................24200.255000000000000000000000000100000000040000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-------TCT-----------------------TGATCA---GCACCAATAGCCGAGTC..............................................27200.255000000000000000000000000000000000050000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATAT-------TCT-----------------------TGATCA---GCACCAATAGCC...................................................25200.255000000000000000000000000000000000040000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................TATGTAACAGGTAGAAGGA---AGCATC...............................................................................................................................................................25200.255000000000000000000000001201000000010000000000000000000000000000
.............................................................................................................................TAAG-------TTAAATA-TAAGGATATCTAAT--------T...........................................................................................................................................................................................................................................................................................................................................26200.255000000000000000000000000014000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-------TCT-----------------------TGATCA---GCACCAATAGCCGAG................................................25200.204001000000000000000000000000000030000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAGGT...............................................................................................................................................................................20200.204000000000000000000000000000200001001000000000000000000000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAAA.....................................................................................................................................................................................................................................................................................................................................................................19200.204000000000000000000000000400000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGTATGTAACAGGTAGAAGGA---AGCATC...............................................................................................................................................................27200.204000000001020000000000000000100000000000000000000000000000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAAATA-T.................................................................................................................................................................................................................................................................................................................................................................22200.204000000000000000000000000000400000000000000000000000000000000000
...........................................................................................................................TGTAAG-------TTAAATA-TAAGGATATCTA......................................................................................................................................................................................................................................................................................................................................................25200.153001000000000000000000000000000000000020000000000000000000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAAATA-TAAGGAT...........................................................................................................................................................................................................................................................................................................................................................28200.153000000000000000000000000000000000003000000000000000000000000000
......................................................................................................................................................TATCTAAT--------TTC--TTTCC--------------T--TT----------------TTGTT-----------...............................................................................................................................................................................................................................................................................24200.153000000000000000000000000003000000000000000000000000000000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAAATA-TAAGGAA...........................................................................................................................................................................................................................................................................................................................................................28200.153000000000000000000000000001200000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAG.................................................................................................................................................................................18200.153000000000000000000000000000000000000003000000000000000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAGGTAGAA...........................................................................................................................................................................24200.102000000000000000000000000002000000000000000000000000000000000000
...........................................................................................................................TGTAAG-------TTAAATA-TAAGGATATCT.......................................................................................................................................................................................................................................................................................................................................................24200.102000000000000200000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................T---------ATAT-------TCT-----------------------TGATCA---GCACCA.........................................................20200.102002000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TAAG-------TTAAATA-TAAGGATATCTAAT--------............................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000020000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCA---GCACCAATAGCCGAG................................................21200.102000000000000000000000000000002000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------------------TGATCA---GCACCAATAGCCGAGTC..............................................26200.102200000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-------TCT-----------------------TGATCA---GCACCAATAGCCGAGT...............................................26200.102000200000000000000000000000000000000000000000000000000000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAA......................................................................................................................................................................................................................................................................................................................................................................18200.102000000000000000000000000000000002000000000000000000000000000000
....................................................................................................................AAAGTGTTGTAAG-------TTAAATA-TAAGGATA..........................................................................................................................................................................................................................................................................................................................................................28200.102001000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................T---------ATAT-------TCT-----------------------TGATCA---GCACCAAT.......................................................22200.102000000000000000000000000000020000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------------------TGATCA---GCACCAATAGCCGAG................................................24200.102000000000000000000000000020000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AT---------ATAT-------TCT-----------------------TGATCA---GCAC...........................................................19200.102000000002000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATAT-------TCT-----------------------TGATCA---GCACCAATAGCCGAG................................................28200.102000000000000000000000000002000000000000000000000000000000000000
................................................................................................................................................TAAGGATATCTAAT--------TTC--TTTCC--------------T--TT----------------T..............................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000000000000000000000000000000000000002
...........................................................................................................................TGTAAG-------TTAAATA-TAAGGAT...........................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000002000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-------TCT-----------------------TGATCA---GCACCAATAGCC...................................................22200.102000000000000000000000000000000000020000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TAACAGGTAGAAGGA---AGCATCTCCGACC........................................................................................................................................................28200.102002000000000000000000000000000000000000000000000000000000000000
.TTC----------------------------------------------------------------------------------------TG---------------------TAAAGTGTTGTAAG-------TTAAATA-T.................................................................................................................................................................................................................................................................................................................................................................27200.102000000000000000000000000002000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATAT-------TCT-----------------------TGATCA---GCACCAATAGC....................................................24200.102000000000000000000000002000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---GCACCAATAGCCGAGTCGATCTAG.......................................27200.102000000000000000000000000000000010010000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAGG................................................................................................................................................................................19200.102000000000000000000000000000000000000200000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTAGCCATGTCCGTCTGTCTG......................26200.102000020000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCA---GCACCAATAGCCGAGTCGA............................................25200.102001000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTCCGTCCGT.........21200.051000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CT-----------------------TGATCA---GCACCAATAGCCGA.................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAAATA-TAAG..............................................................................................................................................................................................................................................................................................................................................................25200.051000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATAT-------TCT-----------------------TGATCA---GCACCAATAGCCG..................................................26200.051000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ATAAA---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GCA............................................................27200.051000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................AAGTGTTGTAAG-------TTAAATA-TAAGGA............................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000001000000000000000000000000000000
............................................................................................TG---------------------TAAAGTGTTGTAAG-------TTAAATA-TAAGG.............................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................ATC----C-------AAA----TGTATGTAACAGGTAGAAG..........................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................TGTTGTAAG-------TTAAATA-TAAGGATATC........................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................AAGTGTTGTAAG-------TTAAATA-TAAGG.............................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................GTAAG-------TTAAATA-TAAGGATATCTAAT--------T...........................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------------------TGATCA---GCACCAATAGCCG..................................................22200.051000000000000000000000000000100000000000000000000000000000000000
ATTC----------------------------------------------------------------------------------------TG---------------------TAAAGTGTTGTAAG-------TTAAATA-T.................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCA---GCACCAATAGCCGAGTCGATC..........................................27200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTCCGTC............18200.051010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AAATA-TAAGGATATCTAA.....................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CAGGTAGAAGGA---AGCATCTCCGACCCC......................................................................................................................................................27200.051000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCCGTCTGTC........................25200.051000000000000000000000000000001000000000000000000000000000000000
............................................................................................TG---------------------TAAAGTGTTGTAAG-------TTAAATA-TAAG..............................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................AAAGTGTTGTAAG-------TTAAATA-..................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ATGTAACAGGTAGAAGGA---AGCATC...............................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATAGCCGAGTCGATCTAG.......................................21200.051000000000000000000000000000100000000000000000000000000000000000
.............................................................................................G---------------------TAAAGTGTTGTAAG-------TTAAATA-TAAG..............................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................TGTAAG-------TTAAATA-TAAGGATA..........................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000100
................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------------------TGATCA---GCACCAATAGCC...................................................21200.051000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................AAAATC----C-------AAA----TGTATGTAACAGGT...............................................................................................................................................................................24200.051000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCCGTCTGTCTGTCCGTCCGT.............26200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATAT-------TCT-----------------------TGATCA---GCACCAATAGCCGA.................................................27200.051000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAATAGCCGAGTCGATCTAGCC.....................................25200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................TGTAAG-------TTAAATA-TAAGGATATCTAAT--------C...........................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TAT---------ATAT-------TCT-----------------------TGATCA---GCACCAATAG.....................................................26200.051000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................C-------AAA----TGTATGTAACAGGTAGAAGG.........................................................................................................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTAACAGGTAGAAGGA---AGCATC...............................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTATGTAACAGGTAGAAGGA---A....................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-------TCT-----------------------TGATCA---GCACCAATA......................................................19200.051000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TAGAAGGA---AGCATCTCCGACC........................................................................................................................................................21200.051000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................ATGTAACAGGTAGAAGGA---AGC..................................................................................................................................................................21200.051000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................GTTGTAAG-------TTAAATA-TAAGG.............................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCACCAATAGCCGAGTCGATC..........................................22200.051000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AT---------ATAT-------TCT-----------------------TGATCA---GCACCAATAGCC...................................................27200.051000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAATAGCCGAGTCGATCT.........................................21200.051000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTAGCCATGTC................................22200.051000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAATAGCCGAGTCGATCTAGCCA....................................25200.051000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................G-----CAAAATC----C-------AAA----TGTATGTAACAGGT...............................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAGCCATGTCCGTCTGTCT.......................22200.051000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................ATCTAAT--------TTC--TTTCC--------------T--TT----------------TTGTT-----------...............................................................................................................................................................................................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTCCGTCTGTC........................18200.051000000000000000000001000000000000000000000000000000000000000000
..TC----------------------------------------------------------------------------------------TG---------------------TAAAGTGTTGTAAG-------TTAAATA-T.................................................................................................................................................................................................................................................................................................................................................................26200.051000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TT--GTGTTTGTG-----CAAAATC----C-------AAA----TGTA.........................................................................................................................................................................................26200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCCGTATGT.....21200.051000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTATGTAACAGGTAGAAG..........................................................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGCCATGTCCGTCTGTCTGTCCGTC................27200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CAGGTAGAAGGA---AGCATCTC.............................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................A---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GC.............................................................22200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGTATGTAACAGGTAGAAGG.........................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTAGCCATGTCCG..............................21200.051000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................TGTAAG-------TTAAATA-TAAGGATATCTAAC--------............................................................................................................................................................................................................................................................................................................................................27200.051000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................AAG-------TTAAATA-TAAGGATATCT.......................................................................................................................................................................................................................................................................................................................................................21200.051010000000000000000000000000000000000000000000000000000000000000
...C----------------------------------------------------------------------------------------TG---------------------TAAAGTGTTGTAAG-------TTAAATA-T.................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---GCACCAATAGCCGAGTCG.............................................21200.051000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTATGTAACAGGTAGAAGGA---AGCATCT..............................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................A---------------------GTATAT---------ATAT-------TCT-----------------------TGATCA---GCACCAAT.......................................................28200.051000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................C-------AAA----TGTATGTAACAGGTAGAAGGA---AGC..................................................................................................................................................................28200.051000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................TTGTAAG-------TTAAATA-TAAGGAT...........................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ACAGGTAGAAGGA---AGCATC...............................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCCG..............................19200.051000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTAGCCATGTCCGTCT...........................24200.051000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTAGCCATGTCCGTCTGT.........................22200.051000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CT-----------------------TGATCA---GCACCAATAGC....................................................19200.051000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATCTAGCCATGTCCGTC............................22200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................A----TGTATGTAACAGGTAGAAG..........................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................AAGTGTTGTAAG-------TTAAATA-TAAG..............................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTAGCCATGTCCGTC............................19200.051000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CAAAATC----C-------AAA----TGTATGTAACAGGT...............................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TAAAGTGTTGTAAG-------TTAAATA-..................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................C----C-------AAA----TGTATGTAACAGGTAGAAGGA---A....................................................................................................................................................................27200.051000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TGATCA---GCACCAATAGCCGAGTCGAT...........................................27200.051000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................T---------ATAT-------TCT-----------------------TGATCA---GCACCAATAGCCGA.................................................28200.051000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TG-----CAAAATC----C-------AAA----TGTATGTAACAGGTA..............................................................................................................................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................TATCTAAT--------TTC--TTTCC--------------T--TT----------------TTGTC-----------...............................................................................................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC----C-------AAA----TGTATGTAACAGGTAG.............................................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCCGTCTGTCTGTCCG..................21200.051000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTAACAGGTAGAAGGA---AGCATCTC.............................................................................................................................................................24200.051000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................GTGTTGTAAG-------TTAAATA-TAAGGATATC........................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
GCCT------------------------ATG---TATATAAAAATATTCTTTTATTA-------------------------------------------------------------------------------------------------------------TTT--TTTT---------------T-TTT----------------TTATA-----------GATTTTTATACCCTGAACCCATT--GAAAATGGAA----AATCAGGGTATA-----ATGGTTTTGTGA-------ATG--TGTGTATGTAACGGGCAGAAGGA---GTCATCGCAGACCCCATAAA---------------------GTGTAT---------ATAT-------TCT-----------------------TGATCA---GCACGAAGAGCTGAGTCGATATAGCCCTGCCCGTC--------CGTCCGTCCG----TATGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................AAA---------------------GTGTAT---------ATAT-------TCT-----------------------TGATCA---GCAC...........................................................2650.201100000
.......................................................................................................................................................................................................................................................................................................................................................ACCCCATAAA---------------------GTGTAT---------ATAT-------TCT-----------------------TGATC...................................................................28170.122200000
........................................................................................................................................................................................................................................................TT--GAAAATGGAA----AATCAGGGTATA-----.......................................................................................................................................................................................................................24200.102100010
........................................................................................................................................................................................................................................................................................................................................GA---GTCATCGCAGACCCCATAAA---------------------GT..........................................................................................................................24200.051100000
...........................................................................................................................................................................................................................................................................................................................TAACGGGCAGAAGGA---GTCATC...............................................................................................................................................................21200.051000001
.......................................................................................................................................................................................................................................................................................................................................................ACCCCATAAA---------------------GTGTAT---------ATAT-------TCT-----------------------T.......................................................................24200.051000010
.......................................................................................................................................................................................................................................................................................................................................................ACCCCATAAA---------------------GTGTAT---------ATAT-------TCT-----------------------........................................................................23200.051100000
.............................................................................................................................................................................................................................................................................................................................................GTCATCGCAGACCCCATAAA---------------------............................................................................................................................20200.051100000
.............................................................................................................................................................................................................................................................................................................................ACGGGCAGAAGGA---GTCATCGCAG...........................................................................................................................................................23200.051100000
.....................................................................................................................................................................................................................................................................................................................TGTATGTAACGGGCAGAAGGA---.....................................................................................................................................................................21200.051000001
.............................................................................................................................................................................................................................................................................................................................................GTCATCGCAGACCCCATAAA---------------------GT..........................................................................................................................22200.051100000
.................................................................................................................................................................................................................................................................................................................................GCAGAAGGA---GTCATCGCAGACCCCATA...................................................................................................................................................27200.051100000
droGri2
AGGA------TAT-GCTACTACCAC------------------------------TTTACTCTGGAGT----------------------ACTA---------------------CACAGTTCTGGGAGCGTA------AGTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCTCCCGAAGAAATTAACAATTTTAATACAAC---------------------------------------CTGC-------TTT-----------------------TTACCA------TTATAATCAAGATTTGTCTGACTTTATTTATT--------CATTTATTTG----AATA--SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/18/2015 at 12:43 PM