ID:

dsi_14956

Coordinate:

3l:8569757-8569929 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.5 -38.5 -38.5

Flybase annnotation

exon [3l_8569930_8570131_+]; CDS [3l_8569930_8570131_+]; exon [3l_8569034_8569756_+]; CDS [3l_8569034_8569756_+]; intron [3l_8569757_8569929_+]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCTAACCAGTACTAACCCAGAGCTGCTGCCGCATCCTGTGGATCCTTCAGGTGGGTCTCAACCTAAACCTTAACTCCATCCATTCACCTGTCCCTCACCTGTGTGTTGCATACTCGCGAGCGCCGCCAATACATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAAGATTTGATGAATGGGCTTAACCTTTCGATTGTTATGTATCACAGATATGGAAAGCGAGGACAAGCAGCTGCTCCTCCAGCTGAAGCGGGACCAC
**************************************************.(((((....)))))....((((.(((((.((((...((..((((((...((((((.((......((((((((.((.(((........)))))...)))).)).)).)).))))))...))))))...))....)))).))))).))))........................**************************************************
Read size # Mismatch Hit Count Total Norm Total M053
female body
M024
male body
SRR553487
NRT_0-2 hours eggs
SRR553486
Makindu_3 day-old ovaries
M023
head
SRR553488
RT_0-2 hours eggs
................................................................................................................................................................................................................................TATGGAAAGCGAGGACAAGCAGCTG........................ 25 0 1 2.00 2 0 0 2 0 0 0
........................GCTGCCGCATCCTGTGGATCCTTC................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
..........ACTAACCCAGAGCTGCTACCG.................................................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................AGCGAGGACAAGCAGCTGCTC..................... 21 0 1 1.00 1 0 1 0 0 0 0
..............................................TCTGGCGGGTCTCAACCT................................................................................................................................................................................................................. 18 2 1 1.00 1 0 0 0 1 0 0
...................................................................................................................................................................................................TTAACCTTTCGATTGTTATGTATC...................................................... 24 0 1 1.00 1 0 0 0 0 1 0
.................CAGAGCTGCTGCCGCATCCTGTGGATCCT................................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
........................GCTGCCGCATCCTGTGGATC..................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................GGCTAAGATTTGATGAATGGGC.............................................................................. 22 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................CCTCCAGCTGAAGCGGGACC.. 20 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................TGTATCACAGCTATGGA........................................... 17 1 3 0.33 1 0 0 0 1 0 0
........................................................................AATCCATCGATACACCTGTC..................................................................................................................................................................................... 20 3 9 0.22 2 0 2 0 0 0 0
.CTAACCGGTACTAACA................................................................................................................................................................................................................................................................ 16 2 13 0.15 2 0 0 0 0 0 2

Anti-sense strand reads

GGATTGGTCATGATTGGGTCTCGACGACGGCGTAGGACACCTAGGAAGTCCACCCAGAGTTGGATTTGGAATTGAGGTAGGTAAGTGGACAGGGAGTGGACACACAACGTATGAGCGCTCGCGGCGGTTATGTAGGTGTAACGTAACGCGTAGACGGCGACGTATGAAAACTCCCGATTCTAAACTACTTACCCGAATTGGAAAGCTAACAATACATAGTGTCTATACCTTTCGCTCCTGTTCGTCGACGAGGAGGTCGACTTCGCCCTGGTG
**************************************************.(((((....)))))....((((.(((((.((((...((..((((((...((((((.((......((((((((.((.(((........)))))...)))).)).)).)).))))))...))))))...))....)))).))))).))))........................**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
SRR553488
RT_0-2 hours eggs
SRR553487
NRT_0-2 hours eggs
M053
female body
SRR902009
testis
M024
male body
SRR553486
Makindu_3 day-old ovaries
GSM343915
embryo
.................................................................................................................................................ACGCGTAGACGGCGACGTATG........................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TTCGTCCACGAGAGGGTCGACT........... 22 3 2 0.50 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................GTTCGTCCACGAGAGGGTCGAC............ 22 3 3 0.33 1 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................................CGTCCACGAGAGGGTCGACTT.......... 21 3 7 0.29 2 0 0 2 0 0 0 0 0
..........TGATTGGGTCTCGCC........................................................................................................................................................................................................................................................ 15 1 4 0.25 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................TTCGTCCACGAGAGGGTCGAC............ 21 3 5 0.20 1 0 0 0 0 1 0 0 0
.............TTAGGTCTCGACGACG.................................................................................................................................................................................................................................................... 16 1 9 0.11 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................CGTCGACGAGAGGGTCGAC............ 19 2 11 0.09 1 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................TCGTCGACGAGAGGGTCGA............. 19 2 17 0.06 1 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................TTTGTCGACGAGGAGGTGAA............. 20 3 20 0.05 1 0 0 0 0 0 0 0 1
..........................................................................AGGCAGGTAAGTCGACA...................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:8569707-8569979 + dsi_14956 CCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCAT-CC------------ATTCACCTG-----------------------TCCCTCACC----------TG--------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-T--TGA------------TGA----ATGGGCT-----------------------TA-A--CCTTTC--GATT-GTTATGT--ATCACAGATATGGAAAGCGAGG---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCAC
droSec2 scaffold_0:1057610-1057883 + CCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCATTCC------------ATTCACCTG-----------------------TCTCTCACC----------TG--------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-T--TGA------------TGA----ATGGGCT-----------------------TA-A--CCTTAC--GATT-GTTATGT--ATCACAGATATGGAGAGCGAGA---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCAC
dm3 chr3L:8780395-8780668 + CCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCATTCC------------ATTCACCTG-----------------------TCTCTCACC----------TG--------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATTCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGAGTTAA--GA-T-T--TGA------------TGA----ATGGGCT-----------------------TA-A--CGTTAC--GTTT-GTTATGT--ATCACAGATATGGAAAGCGAGG---ATCAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCAC
droEre2 scaffold_4784:5259428-5259692 - CCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCGCCGGAT---CCTACAGGTGGGT-CTCAA-CCT-----------AAGCCCTAAC----------------CCCATGCC------------ATTTACCTG------------------------------------------TG--------------------TGTGTTGCATACTTGCGAGCGCCGCCATTA-------CATCCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-C--TGA------------TGA----GTGTGCC-----------------------TA-A--CTTTAC--GCTG-GTTATGT--ATCGCAGATATGGACAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGACCAC
droYak3 3L:3129100-3129390 - CCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCCGTGGAT---CCTACAGGTGGGT-CTCAA-CCT-----------AAACCGTAACCTTAACCACACCCCATTCCATTCC------------ATTCACCTG-----------------------TCTCTCACC----------TG--------------------TGTGTTGCATACTTGCGAGCGCCGCCAATA-------CATCCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAC--GA-T-T--TGA------------TGA----ATGGGCT-----------------------TAAA--CCTTAC--GATT-GTTATGT--ATCACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGACCAC
droBia1 scf7180000300910:2425904-2426177 - CCTAACCAGTACTAACCCAGAGCTG---CC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCGATCTCGAACTCAGGCTAAACCATAAC-------------------------------------------CT-------------TA--------ACCCTCACC----------TT--------------------TGTGTTGCATACTCTCGAGCGCCGCCAAAA-------CATCCA-CATTGCATTGCGCACCTGCCACTGCATACTTTCGAGGGCTGA--GA-T-A--CTT------------TGA--GTATGGGTT-----------------------TG-A--CTTTAT--GATC-TTTATGTATATCACAGATGTGGACAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGACCAC
droTak1 scf7180000415356:437496-437764 - CCTAACCAGTACTAACCCAGAGCTGCTGCC------------------------GGAT---CCTTCAGGTGGGT-CGCAA-ACC-----------AAACCTAAAA----------------CCCCTCCC---------CCAACTCACCTG---------------------------TCACC----------TG--------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAACATACACATCCC-CATTGCATTGCGCCTCTGCCGCTGCATACTTTCGAGGGCCCA--GA-T-A--TT-------------TGTAAATATTATAT-----------------------TA-A--CTTTAT--GATT------CC--ACAACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGACCAC
droEle1 scf7180000490564:5322-5591 + CCTAACCAGTACTAACCCAGATCTGCTGCC---------GC------GTCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCC-----------TAGC----------------------CCCTT----CTC--------ACTCACCCC-------------TT-C------TCACTCACC----------TG--------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAAAA----CACCCA-CATTGCATTGCGCACCTGCCGCTGCATACTTTCGAGAGCTGA--AAAT-C--ATA------------TGA----ATTGTGT-----------------------TA-A--CTTTT------T-GTTA-AT--ATCGCAGATATGGAGCACGAGG---ACAAGCAG------------CTGCTGCAGCAGCTGAAGCGGGACCAC
droRho1 scf7180000766314:12799-13066 + CCTAACCAGTACTAACCCAGAGCAGCTGCC---------GT------GCCCCGCGGAT---CCTTCAGGTGGGT-CCTAG-C---------------------------------------CCCTT----CTC--------ACCCACCCT-------------CG--------TCTCTCACC----------TG--------------------TGTGTTGCATACTCGCAAGCGCCGCCACCAAA-----CATCCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTCGAGGGCTAACTGA-A-A--TAA------------TGA----ATTGTGT-----------------------TA-A--CTTTGG--GTTT-GTTATGT--ATCGCAGATATGGAGAGCGAGG---ACAAGCAT------------CTGCTGCTGCAGCTGAAGCGGGACCAC
droFic1 scf7180000452451:99786-100061 - CCTAACCACTACTAACCCAGAGCTGCCGCC---------GC------GTCCCGTGGAT---CCTTCAGGTGGGT-CCTGA-CCC-----------TCAC-TTAAC-----------------CCTT----CTC--------AGTCGCCCG-------------TT--------TTCCTCACC----------TG--------------------TGTGTTGCATACTCGCAAGCGCCGCCGAAAGA-----CATCCA-CATCGCATTGCGCATCTGCCACTGCATACTTTTGAGGGTTCC--TA-T-A--ATA------------AGA----ATGGGTT-----------------------TA-A--CTTTGT--GGTA-TTCGTGT--ATCCTAGATGTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGCGGGACCAC
droKik1 scf7180000302474:176800-177098 - CCTAACCAGTACTAACCCCGAGCTGCTGCC---------GC------GTCCCGTGGAT---CCGTCAGGTGGGT-CTAGC-C-------------ACTCC-TAAC----------------TCTCT----CTCTCTCTCCCTCTCACCTG-----------------------C--CTCACC----------TGTGTGTAT----ATTCTCACCTGTGTTGCATACTCTCAAGCGCCGCCAGGT-------CAACCA-CATTGCATTGCGTCTGCGCCGCTGCATACTTTTGAGTGCCGTTTCA-A-A---AAAGAATTTAGAATTAA----ATGTAAAGTTTCTATCCAA------------------------------------T--CCCTCAGATCTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTTCAGCTGAAGCGGGACCAC
droAna3 scaffold_13337:7861387-7861648 - CCTAACCACTACTAACCCAGAGCTGCTGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGA-CTC---------------------------------------GATCTCTCTC--------ACCTGTCCG-------------TT--------CCTCTCACC--------------------------------TGTGTTGCATACTTTCGCGCATAGAAA----------CTCGAA-CATAGCATTGCGCCGGCGCCACTGCATACCTTTGAGAGCTTC--GA-T-C--TT-------------T-A----ATTTTCT----------------------CTA-A--TTTCTTTCAATT-ATTA--A--CTCACAGATGTAGAGAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAAAGGGACCAC
droBip1 scf7180000396541:15950-16211 - CCTAACCACTACTAACACAGAGCTGCAGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGA-CGC-----------GATC----------------------TCTCT----CTC--------ACCTGTCCA-------------TA--------CCTCTCACC--------------------------------TTTGTTGCATACTTTCGCGCATAGAAGCTC-------AA---T-CATGGCATTGCGCCGGCGCCACTGCATACCTTTGAGGGCTCT--GT-A-C---TT------------TGA----TTTTATT-----------------------TA-A--TTTTTT--CCTA-ATCA--A--CTCACAGATGTAGAAAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAACGGGACCAC
dp5 XR_group8:8798174-8798421 - CCTAACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTGC-------------------------------------------------------------------------------------------------------------------CG--------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGACAT-----GTCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---CA-TACCC--------CTAGGGATAA----GTGTGCTATTACTATACAATTGTTGTTCTC---CC--------------------C--CACACAGATCTGGACAGCGAAG---GGAAGCAGCAACAGCAGCTGCTGCAGCTGCAGCTGAAGCGCGACCAC
droPer2 scaffold_50:408034-408281 + CCTAACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTGC-------------------------------------------------------------------------------------------------------------------CG--------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGACAT-----GTCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---CA-TACCC--------CCAGGGATAA----GTGTGCTATTACTATACAATTGTTGTTCTC---CC--------------------C--CACACAGATCTGGACAGCGAGG---GGAAGCAGCAACAACAGCTGCTGCAGCTGCAGCTGAAGCGCGACCAC
droWil2 scf2_1100000004511:8053476-8053723 - dwi_648 TCTAACCAGTACTAACCCAGAGCAGACGCT---------GA------CGTCAACG------CAAACAGGTAAGGTGC-CAGCAGCC---------G--------------------------CTT-----------------------AG-----------------------TTAATTAAA----------AA--------------------TGTGTTGCCTACTTTTATGTGTGTCATTTT-------CATACA-TTTTGC-----AAAAATTGTGTTGCCTACTTACAAAGCATA--------------------------TAA----ATG-------------------TTGTTCTC---TCACTTAATACATTTCCTCG--C--CCTTTAGATCTCGATAATGATGGCGATAAACAA------------TTGCTGCTGCAACTGAAACGTGATCAC
droVir3 scaffold_13049:6458736-6459016 + dvi_18665 CCTAACCAGTACTAACCCAGAGCCACAGCC---------TC---AAGCAGCTATGGAT---GCGACAGGTAGGT-GCAGC-T-------------TTTAC-AAAA----------------TAC------------------GTTGCCTA-------------CTTTTAAGAGC--GCCACA----------TGA----------------AAATGCATTGCCTACTTTCAAACGCAGCCTCAA-------ACTAAA-CATCAAATT----TGCTGCCGTTGCACACTTCTCAGCGCCATC-GA-A-A-----------------AAA----GCCCGTTCCCCAAATTTAAAAGTCATTT--TC-T--CTTTTT--GA---------T--CACATAGATCTGG------AGG---ACAAGGAA------------ATGTTAATGCAGCTGAAACGCGATCAT
droMoj3 scaffold_6680:4773088-4773257 + CCTAACCAGTACTAACCAAGAGCCTC---C---------AA------CAGCCATGGAA---GCAACAGGTAGGT-GCAGC-T-------------T--------------------------CTAT----TTG--------AACTAAAAAAAATTGTAGCATACTTTTCAGAGC--CGCAAAAAGCCAGCGCTTCTCAC--ATTCTATATCAAATATGTTGCATACTTTCAAGCGCTGCAAATA-------AATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_9452:2791-3059 + CCTAACCAGTACTAACCCAGAACTACCACAACAGTTGCCTCCACTACAAGCTATGGAT---ACAACAGGTAGGT-TTTT----T-----------AAGCT-------------------------------------------------------------------------T--TCAGCG----------AGA----------------A--ATTGTTGCATGCTTTCAGGCGCTGCCACAA-------AATCCA---TCATTTTACTCGT-CGCTGTTGCATTCTTTTCTGTGTCATTCGA-A-A--CAA-AAC---A--GATGTA-TTC-TAGCT--------TCTAT----------TG-A--CAATTT--GCAC-TTTTTGT---ACACAGATCTGGA------GG---ATAAGGAA------------ATGCTAATGCAACTGAAACGTGATCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCAT-CC------------ATTCACCTG-----------------------TCCCTCACC----------TG--------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-T--TGA------------TGA----ATGGGCT-----------------------TA-A--CCTTTC--GATT-GTTATGT--ATCACAGATATGGAAAGCGAGG---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCACSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ACAAGCAG------------CTG........................2512.00200000000200000000
........................GCTGCC---------GC------ATCCTGTGGAT---CCTTC............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ACAAGCAG------------CTGCTC.....................2111.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................T-----------------------TA-A--CCTTTC--GATT-GTTATGT--ATC.....................................................................2411.00110000000000000000
.................CAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCT..............................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
........................GCTGCC---------GC------ATCCTGTGGAT---C................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
......................................................................................................................................................................................................................................................................................................GGCTAA--GA-T-T--TGA------------TGA----ATGGGC............................................................................................................................2211.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAGCTGAAGCGGGACC..2011.00101000000000000000
droSec2
CCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCATTCC------------ATTCACCTG-----------------------TCTCTCACC----------TG--------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-T--TGA------------TGA----ATGGGCT-----------------------TA-A--CCTTAC--GATT-GTTATGT--ATCACAGATATGGAGAGCGAGA---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCACSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
...................GAGCTGCTGCC---------GC------ATCCTGTGGAT---CC...............................................................................................................................................................................................................................................................................................................................................................................................................2612.0022000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGATATGGAGAGCGAGA---ACAAGC.........................................2311.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAGCGAGA---ACAAGCAG------------C..........................2111.0011000
.......................TGCTGCC---------GC------ATCCTGTGGAT---.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
dm3
CCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCATTCC------------ATTCACCTG-----------------------TCTCTCACC----------TG--------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATTCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGAGTTAA--GA-T-T--TGA------------TGA----ATGGGCT-----------------------TA-A--CGTTAC--GTTT-GTTATGT--ATCACAGATATGGAAAGCGAGG---ATCAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCACSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAAGCGAGG---ATCAGCAG------------CTGCT......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGG---ATCAGCAG------------CTGCTC.....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCTGAAGCGGGACC..1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTACTAACCCAGAGCTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCCAGCTGAAGCGGGACC..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAGG---ATCAGCAG------------CT.........................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........GTACTAACCCAGAGCTGCTGCC---------GC------...............................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ATCAGCAG------------CTGCTC.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCGAGG---ATCAGCAG------------CT.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TAACCCAGAGCTGCTGCC---------G......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GAGAGTTAA--GA-T-T--TGA------------TGA----ATGGGCT-----------------------T...................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................................................GA------------TGA----ATGGGCT-----------------------TA-A--CGT...........................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ATCAGCAG------------C..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGC.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGAGCTGCTGCC---------GC------ATCCTGTGGAT---.................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAAAGCGAGG---ATCAGCA........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGCTGAAGCGGGACC..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GCCGCCAATA-------CATTCA-CATTGCATTG..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGCC---------GC------ATCCTGTGGAT---CCTTCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAGCTGAAGCGGGACCA.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCTGCC---------GC------ATCCTGTGGAT---CCTT.............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACCCAGAGCTGCTGCC---------GC------ATCC...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AACCCAGAGCTGCTGCC---------GC------...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........GTACTAACCCAGAGCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACTAACCCAGAGCTGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACCCAGAGCTGCTGCC---------GC------ATCCTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACTAACCCAGAGCTGCTGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............TAACCCAGAGCTGCTGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGCTC.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAGCAG------------CTGCTCC....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GA-T-T--TGA------------TGA----ATGGGCT-----------------------TA-.................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGCGAGG---ATCAGCA........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAAGCGAGG---ATCAGCAG------------CTG........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGAGCTGCTGCC---------GC------ATCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ATCAGCAG------------CTGCT......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TAA--GA-T-T--TGA------------TGA----ATGGGCT-----------------------TA-A--CGT...........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAGG---ATCAGCAG------------CTG........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATTCACCTG-----------------------TCTCTCACC----------TG--------------------T.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................ACTCGCGAGCGCCGCCAATA-------C..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAG------------CTGCTCCTCCAGCTGAAGC........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGCT......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTCCAGCTGAAGCGGGACC..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAG------------CTGCTCCTCCAGCTGAAGCGGG.....2911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTCCAGCTGAAGCGGGACC..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................G---ATCAGCAG------------CTGCTCCTCC.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTTAA--GA-T-T--TGA------------TGA----ATGGGCT-----------------------T...................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...................................................................................................................................................................................................................................................................................................................T--TGA------------TGA----ATGGGCT-----------------------TA-A--CGTTAC--GT....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................TGCC---------GC------ATCCTGTGGAT---CCTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................CT-----------AAACCTTAAC----------------TCCATTCC------------A................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTAA--GA-T-T--TGA------------TGA----ATGGGCT-----------------------....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGAAGCGGGACCAC1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CAGATATGGAAAGCGAGG---ATC............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTCCAGCTGAAGCGG......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................CACCTG-----------------------TCTCTCACC----------TG--------------------TGTGTTGC................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ATCAGCAG------------CTG........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GGGCT-----------------------TA-A--CGTTAC--GTTT-GTTATGT--A.......................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAGCTGAAGCGGGAC...1911.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GC------ATCCTGTGGAT---CCTTCA...........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCGAGG---ATCAGCAG------------CTGCTATC...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGCTGCC---------GC------ATCCTGTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGTACTAACCCAGAGCTGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGG---ATCAGCAG------------CTGCTCC....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAGCAG------------CTGC.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................GTGGAT---CCTTCAGGTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCC---------GC------ATCCTGTGGAT---CCTTC............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACCAGTACTAACCCAGAGCTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................TCTCACC----------TG--------------------TGTGTTGCATAC............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.........................CTGCC---------GC------ATCCTGTGGAT---CCTTCA...........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAAAGCGAGG---ATC............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................A-T-T--TGA------------TGA----ATGGGCT-----------------------TA-A--CG............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
........................GCTGCC---------GC------ATCCTGTGGAT---CC...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAGCAG------------CTG........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCGAGG---ATCAGCAG------------CTG........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAAAGCGAGG---ATCA...........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGCTCG....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGCGAGG---ATCAGCAG------------CT.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................TTTGAGAGTTAA--GA-T-T--TGA------------TGA----ATGG..............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............................................................................................................................................................................................................................................................................ATCTGCCGCTGCATACTTTT...........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAATC........................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCGCCGGAT---CCTACAGGTGGGT-CTCAA-CCT-----------AAGCCCTAAC----------------CCCATGCC------------ATTTACCTG------------------------------------------TG--------------------TGTGTTGCATACTTGCGAGCGCCGCCATTA-------CATCCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-C--TGA------------TGA----GTGTGCC-----------------------TA-A--CTTTAC--GCTG-GTTATGT--ATCGCAGATATGGACAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGACCACSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
........GTACTAACCCAGAGCTGCTGCC---------G......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................AGATATGGACAGCGAGG---ACAAGC.........................................2311.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................GATATGGACAGCGAGG---ACA............................................1911.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------CTGCTGCTCCAACTGAAGCGG......2311.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTCCAACTGAAGCG.......1911.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGCTCCAAC..............2511.0011000000
...............CCCAGAGCTGCTGCC---------GC------ATC............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................TATGGACAGCGAGG---ACAAGCAG------------C..........................2311.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------------CTGCTGCTCCAACTGA...........2111.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ACAAGCAG------------CTGCTGCT...................2311.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................ATATGGACAGCGAGG---ACAAGCA........................................2211.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAGG---ACAAGCAG------------CT.........................2211.0011000000
..................AGAGCTGCTGCC---------GC------ATCCGCCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ACAAGCAG------------CTGC.......................1911.0010000100
..................AGAGCTGCTGCC---------GC------ATCCGCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCGAGG---ACAAGCAG------------CTGCT......................2311.0010000010
.................CAGAGCTGCTGCC---------GC------ATCCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GGACAGCGAGG---ACAAGCAG------------CTGCTGCT...................2711.0011000000
................CCAGAGCTGCTGCC---------GC------ATC............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..............ACCCAGAGCTGCTGCC---------GC------ATC............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGG---ACAAGCAG------------CTGC.......................1811.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTCCAACTGAAGCGGGACCAC2511.0011000000
.................CAGAGCTGCTGCC---------GC------ATCCGCCGGAT---.................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...........CTAACCCAGAGCTGCTGCC---------GC------ATC............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
..TAACCAGTACTAACCCAGAGCTGCTGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
droYak3
CCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCCGTGGAT---CCTACAGGTGGGT-CTCAA-CCT-----------AAACCGTAACCTTAACCACACCCCATTCCATTCC------------ATTCACCTG-----------------------TCTCTCACC----------TG--------------------TGTGTTGCATACTTGCGAGCGCCGCCAATA-------CATCCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAC--GA-T-T--TGA------------TGA----ATGGGCT-----------------------TAAA--CCTTAC--GATT-GTTATGT--ATCACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGACCACSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.............AACCCAGAGCTGCTGCC---------GC------...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAGCGAGG---ACAAGC.........................................1911.00100001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAGCGAGG---ACAAGCAG------------CTGCT......................2611.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCCAACTGAAGCGGGA....2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAGAGCGAGG---ACAAGC.........................................2211.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAGAGCGAGG---ACAAG..........................................2111.00100000010000
...................GAGCTGCTGCC---------GC------ATCCCGTGGAT---C................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGT....................1911.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CTGCTGCTCCAACTGAAGC........2011.00101000000000
droBia1
CCTAACCAGTACTAACCCAGAGCTG---CC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCGATCTCGAACTCAGGCTAAACCATAAC-------------------------------------------CT-------------TA--------ACCCTCACC----------TT--------------------TGTGTTGCATACTCTCGAGCGCCGCCAAAA-------CATCCA-CATTGCATTGCGCACCTGCCACTGCATACTTTCGAGGGCTGA--GA-T-A--CTT------------TGA--GTATGGGTT-----------------------TG-A--CTTTAT--GATC-TTTATGTATATCACAGATGTGGACAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGACCACSizeHit CountTotal NormTotal
No Reads
droTak1
CCTAACCAGTACTAACCCAGAGCTGCTGCC------------------------GGAT---CCTTCAGGTGGGT-CGCAA-ACC-----------AAACCTAAAA----------------CCCCTCCC---------CCAACTCACCTG---------------------------TCACC----------TG--------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAACATACACATCCC-CATTGCATTGCGCCTCTGCCGCTGCATACTTTCGAGGGCCCA--GA-T-A--TT-------------TGTAAATATTATAT-----------------------TA-A--CTTTAT--GATT------CC--ACAACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGACCACSizeHit CountTotal NormTotal
No Reads
droEle1
CCTAACCAGTACTAACCCAGATCTGCTGCC---------GC------GTCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCC-----------TAGC----------------------CCCTT----CTC--------ACTCACCCC-------------TT-C------TCACTCACC----------TG--------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAAAA----CACCCA-CATTGCATTGCGCACCTGCCGCTGCATACTTTCGAGAGCTGA--AAAT-C--ATA------------TGA----ATTGTGT-----------------------TA-A--CTTTT------T-GTTA-AT--ATCGCAGATATGGAGCACGAGG---ACAAGCAG------------CTGCTGCAGCAGCTGAAGCGGGACCACSizeHit CountTotal NormTotal
No Reads
droRho1
CCTAACCAGTACTAACCCAGAGCAGCTGCC---------GT------GCCCCGCGGAT---CCTTCAGGTGGGT-CCTAG-C---------------------------------------CCCTT----CTC--------ACCCACCCT-------------CG--------TCTCTCACC----------TG--------------------TGTGTTGCATACTCGCAAGCGCCGCCACCAAA-----CATCCA-CATTGCATTGCGCATCTGCCGCTGCATACTTTCGAGGGCTAACTGA-A-A--TAA------------TGA----ATTGTGT-----------------------TA-A--CTTTGG--GTTT-GTTATGT--ATCGCAGATATGGAGAGCGAGG---ACAAGCAT------------CTGCTGCTGCAGCTGAAGCGGGACCACSizeHit CountTotal NormTotal
No Reads
droFic1
CCTAACCACTACTAACCCAGAGCTGCCGCC---------GC------GTCCCGTGGAT---CCTTCAGGTGGGT-CCTGA-CCC-----------TCAC-TTAAC-----------------CCTT----CTC--------AGTCGCCCG-------------TT--------TTCCTCACC----------TG--------------------TGTGTTGCATACTCGCAAGCGCCGCCGAAAGA-----CATCCA-CATCGCATTGCGCATCTGCCACTGCATACTTTTGAGGGTTCC--TA-T-A--ATA------------AGA----ATGGGTT-----------------------TA-A--CTTTGT--GGTA-TTCGTGT--ATCCTAGATGTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGCGGGACCACSizeHit CountTotal NormTotal
No Reads
droKik1
CCTAACCAGTACTAACCCCGAGCTGCTGCC---------GC------GTCCCGTGGAT---CCGTCAGGTGGGT-CTAGC-C-------------ACTCC-TAAC----------------TCTCT----CTCTCTCTCCCTCTCACCTG-----------------------C--CTCACC----------TGTGTGTAT----ATTCTCACCTGTGTTGCATACTCTCAAGCGCCGCCAGGT-------CAACCA-CATTGCATTGCGTCTGCGCCGCTGCATACTTTTGAGTGCCGTTTCA-A-A---AAAGAATTTAGAATTAA----ATGTAAAGTTTCTATCCAA------------------------------------T--CCCTCAGATCTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTTCAGCTGAAGCGGGACCACSizeHit CountTotal NormTotal
No Reads
droAna3
CCTAACCACTACTAACCCAGAGCTGCTGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGA-CTC---------------------------------------GATCTCTCTC--------ACCTGTCCG-------------TT--------CCTCTCACC--------------------------------TGTGTTGCATACTTTCGCGCATAGAAA----------CTCGAA-CATAGCATTGCGCCGGCGCCACTGCATACCTTTGAGAGCTTC--GA-T-C--TT-------------T-A----ATTTTCT----------------------CTA-A--TTTCTTTCAATT-ATTA--A--CTCACAGATGTAGAGAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAAAGGGACCACSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
....................AGCTGCTGCC---------GC------TACCCGTGGAT---CCC..............................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGAGCGAGG---ACAAGCAG------------C..........................2212.002100001
.......................................................................................................................................................................................................................................................................................................................................................................................................................CGAGG---ACAAGCAG------------CTGCTGATGC.................2311.001100000
............TAACCCAGAGCTGCTGCC---------GC------TACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGAGCGAGG---ACAAG..........................................1811.001100000
..........ACTAACCCAGAGCTGCTGCC---------GC------TACCC..........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................GCTGCTGCC---------GC------TACCCGTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGATGCA................2311.001100000
...............CCCAGAGCTGCTGCC---------GC------TACCC..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............ACCCAGAGCTGCTGCC---------GC------TACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..................AGAGCTGCTGCC---------GC------TACCCGTGGAT---.................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...............CCCAGAGCTGCTGCC---------GC------TACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGATGCAACTGAAAAGGGACCA.2511.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGAT...................2011.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGATGCAACTGAAAAGGGAC...2311.001000010
.............AACCCAGAGCTGCTGCC---------GC------TACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................................GC------TACCCGTGGAT---CCCGCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................GAGCTGCTGCC---------GC------TACCCGTGGAT---.................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...................GAGCTGCTGCC---------GC------TACCCGTGGAT---CC...............................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...........CTAACCCAGAGCTGCTGCC---------GC------TACCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................AGG---ACAAGCAG------------CTGCTGATGCA................2211.001100000
.....CCACTACTAACCCAGAGCTGCTGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGCAACTGAAAAGGGACC..2311.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGATGC.................2211.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGAGAGCGAGG---ACAAG..........................................2011.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................GATGTAGAGAGCGAGG---ACAAGCAG------------CT.........................2611.001100000
CCTAACCACTACTAACCCAGAGCTGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAACTGAAAAGGGACCA.2111.001100000
...................GAGCTGCTGCC---------GC------TACCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................GAGCTGCTGCC---------GC------TACCCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGAGCGAGG---ACAAGCAG------------CTGC.......................2511.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAGCGAGG---ACAAGCAG------------CTGCTG.....................2611.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAGAGCGAGG---ACAAGC.........................................2011.001100000
..............ACCCAGAGCTGCTGCC---------GC------TACCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................................................................................................................................................................................................................................................................CTTC--GA-T-C--TT-------------T-A----ATTTTCT----------------------CT...................................................................................................2111.001100000
droBip1
CCTAACCACTACTAACACAGAGCTGCAGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGA-CGC-----------GATC----------------------TCTCT----CTC--------ACCTGTCCA-------------TA--------CCTCTCACC--------------------------------TTTGTTGCATACTTTCGCGCATAGAAGCTC-------AA---T-CATGGCATTGCGCCGGCGCCACTGCATACCTTTGAGGGCTCT--GT-A-C---TT------------TGA----TTTTATT-----------------------TA-A--TTTTTT--CCTA-ATCA--A--CTCACAGATGTAGAAAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAACGGGACCACSizeHit CountTotal NormTotal
No Reads
dp5
CCTAACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTGC-------------------------------------------------------------------------------------------------------------------CG--------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGACAT-----GTCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---CA-TACCC--------CTAGGGATAA----GTGTGCTATTACTATACAATTGTTGTTCTC---CC--------------------C--CACACAGATCTGGACAGCGAAG---GGAAGCAGCAACAGCAGCTGCTGCAGCTGCAGCTGAAGCGCGACCACSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGCAGCA.....................................2616.0060000000060
............................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGCAGC......................................2513.0030000000030
.............................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGACAGCGAAG---GGAAGCAGCA.....................................2512.0020000000020
.......AGTACTAACCCCG------------------------------CTGTGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGATCTGGACAGCGAAG---GGAAGC.........................................2312.0020000000020
..........................................................................................................................................................................................................................................................................................................................................................................................................CAGATCTGGACAGCGAAG---GGAAGC.........................................2412.0020000000020
.......AGTACTAACCCCG------------------------------CTGTGGATACCCC...............................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGACAGCGAAG---GGAAGCAGC......................................2812.0020000000020
................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAAG---GGAAGCAGC......................................2112.0020000000020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGCTGAAGCGCGACC..2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGCA.....................................2411.0010000000010
......CAGTACTAACCCCG------------------------------CTGTGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........ACTAACCCCG------------------------------CTGTGGATACC.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........ACTAACCCCG------------------------------CTGTGGATACCCC...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........TACTAACCCCG------------------------------CTGTGGATACCCCA..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTGGACAGCGAAG---GGAAGCAGCAACAGC................................2811.0010000000001
............................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGCA........................................2311.0010000000010
............................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGC.........................................2211.0010000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGC......................................2311.0010000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGACAGCGAAG---GGAAGC.........................................2511.0010000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCTGAAGCGCGACC..1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCTGCTGCAGCT...................2311.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGACAGCGAAG---GGAAGCAGC......................................2411.0010000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGCAAC...................................2611.0010000000010
.......AGTACTAACCCCG------------------------------CTGTGGATA...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000000
........GTACTAACCCCG------------------------------CTGTGGATACCCCA..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGCAA....................................2511.0010000000100
..............ACCCCG------------------------------CTGTGGATACCCC...............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........GTACTAACCCCG------------------------------CTGTGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
CCTAACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTGC-------------------------------------------------------------------------------------------------------------------CG--------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGACAT-----GTCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---CA-TACCC--------CCAGGGATAA----GTGTGCTATTACTATACAATTGTTGTTCTC---CC--------------------C--CACACAGATCTGGACAGCGAGG---GGAAGCAGCAACAACAGCTGCTGCAGCTGCAGCTGAAGCGCGACCACSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
.......AGTACTAACCCCG------------------------------CTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
........GTACTAACCCCG------------------------------CTGTGGATACC.................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
........GTACTAACCCCG------------------------------CTGTGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTGGACAGCGAGG---GGAAGCA........................................2011.001010000
....ACCAGTACTAACCCCG------------------------------CTG.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGACAGCGAGG---GGAAG..........................................2411.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAGG---GGAAGCA........................................1911.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAGG---GGAAGC.........................................2211.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAGG---GGAAGCAGC......................................2111.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................GGACAGCGAGG---GGAAGCAGC......................................2011.001010000
........GTACTAACCCCG------------------------------CTGTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droWil2
TCTAACCAGTACTAACCCAGAGCAGACGCT---------GA------CGTCAACG------CAAACAGGTAAGGTGC-CAGCAGCC---------G--------------------------CTT-----------------------AG-----------------------TTAATTAAA----------AA--------------------TGTGTTGCCTACTTTTATGTGTGTCATTTT-------CATACA-TTTTGC-----AAAAATTGTGTTGCCTACTTACAAAGCATA--------------------------TAA----ATG-------------------TTGTTCTC---TCACTTAATACATTTCCTCG--C--CCTTTAGATCTCGATAATGATGGCGATAAACAA------------TTGCTGCTGCAACTGAAACGTGATCACSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.................CAGAGCAGACGCT---------GA------CGTCAACG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200
............................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGATAATGATGGCG...............................................1912.00220000
....................AGCAGACGCT---------GA------CGTCAACG------C................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000
..............ACCCAGAGCAGACGCT---------GA------CGT............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.CTAACCAGTACTAACCCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................AGATCTCGATAATGATGGCG...............................................2011.00110000
........GTACTAACCCAGAGCAGACGCT---------GA------...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.............AACCCAGAGCAGACGCT---------GA------CGTCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
...AACCAGTACTAACCCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................GATAATGATGGCGATAAACAA------------T..........................2211.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAA------------TTGCTGCTGCAACTG............2211.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTCGATAATGATGGCGATA............................................1911.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGATGGCGATAAACA........................................1911.00101000
....................AGCAGACGCT---------GA------CGTCAACG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...................GAGCAGACGCT---------GA------CGTCAACG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCAACTGAAACGT......1811.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGATAATGATGGCGAT.............................................2111.00100100
..................................................CAACG------CAAACAGGTAAGGTGC-................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGATCTCGATAATGATGGCA...............................................2011.00110000
...............................................................................................................................................................................................................................................................................................................................................................................ACTTAATACATTTCCTCG--C--CCTTTAG.................................................................2611.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGATAATGATGGCGATAAACA........................................2611.00100100
droVir3
CCTAACCAGTACTAACCCAGAGCCACAGCC---------TC---AAGCAGCTATGGAT---GCGACAGGTAGGT-GCAGC-T-------------TTTAC-AAAA----------------TAC------------------GTTGCCTA-------------CTTTTAAGAGC--GCCACA----------TGA----------------AAATGCATTGCCTACTTTCAAACGCAGCCTCAA-------ACTAAA-CATCAAATT----TGCTGCCGTTGCACACTTCTCAGCGCCATC-GA-A-A-----------------AAA----GCCCGTTCCCCAAATTTAAAAGTCATTT--TC-T--CTTTTT--GA---------T--CACATAGATCTGG------AGG---ACAAGGAA------------ATGTTAATGCAGCTGAAACGCGATCATSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACG.......1812.002002000000000000000000000000000000000000000000000000000000000000
....ACCAGTACTAACCCAGAGCCACAGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000001000100000000000000000000000000000000000000000
.......AGTACTAACCCAGAGCCACAGCC---------TC---A.................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACGCG.....2012.002001000000000000000010000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................A------------ATGTTAATGCAGCTGAAACGCGAT...2511.001000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTAATGCAGCTGAAACGCGATC..2411.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGAAACGCGATCAT1911.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAGCTGAAACGCGAT...1911.001001000000000000000000000000000000000000000000000000000000000000
.................CAGAGCCACAGCC---------TC---AAGCAGCTATG.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGAAACGCGATCA.1811.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAA------------ATGTTAATGCAGCT.............2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTGAAACGCGATCA.1911.001000000000000000001000000000000000000000000000000000000000000000
........GTACTAACCCAGAGCCACAGCC---------TC---AAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......CAGTACTAACCCAGAGCCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGCAGCTGAAACGCGATC..2111.001000000000000000000010000000000000000000000000000000000000000000
.........TACTAACCCAGAGCCACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
..TAACCAGTACTAACCCAGAGCCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACGC......1911.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................A------------ATGTTAATGCAGCTGAAACGCGATCA.2711.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGCAGCTGAAACGCG.....1911.001001000000000000000000000000000000000000000000000000000000000000
.............AACCCAGAGCCACAGCC---------TC---AAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
........................ACAGCC---------TC---AAGCAGCTATGGAT---GC...............................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
....................AGCCACAGCC---------TC---AAGCAGCTAT........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTGG------AGG---ACAAGGAA------------ATG........................1811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATCTGG------AGG---ACAAGGAA------------AT.........................1911.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GG---ACAAGGAA------------ATGTTAATGCAGCTGAA..........2711.001000000000000000000100000000000000000000000000000000000000000000
........GTACTAACCCAGAGCCACAGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.................CAGAGCCACAGCC---------TC---AAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
..............ACCCAGAGCCACAGCC---------TC---AAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CCTAACCAGTACTAACCAAGAGCCTC---C---------AA------CAGCCATGGAA---GCAACAGGTAGGT-GCAGC-T-------------T--------------------------CTAT----TTG--------AACTAAAAAAAATTGTAGCATACTTTTCAGAGC--CGCAAAAAGCCAGCGCTTCTCAC--ATTCTATATCAAATATGTTGCATACTTTCAAGCGCTGCAAATA-------AATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
..........ACTAACCAAGAGCCTC---C---------AA------CAG............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...AACCAGTACTAACCAAGAGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droGri2
CCTAACCAGTACTAACCCAGAACTACCACAACAGTTGCCTCCACTACAAGCTATGGAT---ACAACAGGTAGGT-TTTT----T-----------AAGCT-------------------------------------------------------------------------T--TCAGCG----------AGA----------------A--ATTGTTGCATGCTTTCAGGCGCTGCCACAA-------AATCCA---TCATTTTACTCGT-CGCTGTTGCATTCTTTTCTGTGTCATTCGA-A-A--CAA-AAC---A--GATGTA-TTC-TAGCT--------TCTAT----------TG-A--CAATTT--GCAC-TTTTTGT---ACACAGATCTGGA------GG---ATAAGGAA------------ATGCTAATGCAACTGAAACGTGATCATSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGA------GG---ATAAGGA........................................2020.50101

Generated: 05/18/2015 at 09:30 AM