ID:dsi_1493 |
Coordinate:2r:5840414-5840563 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [2r_5840236_5840413_-]; CDS [2r_5840236_5840413_-]; intron [2r_5840414_5840791_-]
No Repeatable elements found
| --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## ACCCGCATACCATTCGATGCCTGGACGTGTCCGCAAATCGCTCAGAACGTAATATAAACATTACTTTTAATACCGAAAACAAACATAAGCCATGCAGTAGAGTAATTTCAAACCACGCATTGCGCATTGGCCAAATCATATTTCGAATATATACATAAGCCAGTCCTCGAAACCTTCTAATCCACTTGGAACATTTTCAGTGGCTCTGCAAGCTCTCAAGAAGAAGAAGCGCCTGGAGAAGCAACTCCAG **************************************************........................(((((.........(((((((.((((.((.............)).))))))).)))).........((((((....................))))))........(((....)))...)))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR902009 testis |
M025 embryo |
SRR618934 dsim w501 ovaries |
M024 male body |
M023 head |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................GCGCCTGGAGAAGCAAC..... | 17 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................................................................................................AAGAAGCGCCTGGAGAAGCAACTC... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................................................................................................AGAAGAAGCGCCTGGAGAAGCA....... | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................................................................................................CTCAAGAAGAAGAAGCGC.................. | 18 | 0 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..........................................................................................................................................................ATAACCCTGTCCTCGGAACC............................................................................ | 20 | 3 | 3 | 0.33 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ......................................................................................................................................................................................................................CTCATGAAGAAGAATCGGCT................ | 20 | 3 | 4 | 0.25 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........CCATTCGATGCCAGGGCGAGT............................................................................................................................................................................................................................ | 21 | 3 | 9 | 0.11 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .............................................................................................................................................................................................................ATCCGAGCTCTCAAGAAGAA......................... | 20 | 3 | 9 | 0.11 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........CCATTCGATGCCAGGA................................................................................................................................................................................................................................. | 16 | 1 | 19 | 0.11 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .........CCATTCGATGCCTGGGC................................................................................................................................................................................................................................ | 17 | 1 | 10 | 0.10 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........CCATTCGATGCCAGGAC................................................................................................................................................................................................................................ | 17 | 1 | 11 | 0.09 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................AAACTATGCAGTAGAGTAATTTCA............................................................................................................................................ | 24 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
|
TGGGCGTATGGTAAGCTACGGACCTGCACAGGCGTTTAGCGAGTCTTGCATTATATTTGTAATGAAAATTATGGCTTTTGTTTGTATTCGGTACGTCATCTCATTAAAGTTTGGTGCGTAACGCGTAACCGGTTTAGTATAAAGCTTATATATGTATTCGGTCAGGAGCTTTGGAAGATTAGGTGAACCTTGTAAAAGTCACCGAGACGTTCGAGAGTTCTTCTTCTTCGCGGACCTCTTCGTTGAGGTC
**************************************************........................(((((.........(((((((.((((.((.............)).))))))).)))).........((((((....................))))))........(((....)))...)))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | O001 Testis |
M023 head |
SRR618934 dsim w501 ovaries |
SRR902008 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| .................TCGGACCTGCACAGGCGTTTAG................................................................................................................................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ..................................................................AATTATGGCTTTTGTTTG...................................................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................CGGCAGCCCATTAAAGTTT.......................................................................................................................................... | 19 | 3 | 19 | 0.05 | 1 | 0 | 0 | 1 | 0 |
| ...........................................................TAATGAAAATTATGGCAT............................................................................................................................................................................. | 18 | 1 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
| ................................................................AAAGTTATGTCTTTTGTTT....................................................................................................................................................................... | 19 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
| .......................................................................................................................................................................................................CACCAAGACGTTTTAGAGT................................ | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 01:06 AM