ID:

dsi_14823

 Coordinate:

2r:18151955-18152236 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.0 -22.0 -21.7

Flybase annnotation

Antisense to CDS [2r_18152201_18152762_-]; Antisense to three_prime_UTR [2r_18151582_18152200_-]; Antisense to exon [2r_18151582_18152762_-]

No Repeatable elements found

Sense Strand Reads

TACACAAAAGGTTTAATTTACATCAAATTAAATTCGAAGTCTTCGATTTGGTATGAACAAAAATATATTTTTCTTCTTATTTTCGCACTTATCATAAACTTATTGTAACTTATATTTCACACGAGGTTGCTTTGTCGTTGAGTTTAATCCAATATGATACTTCAAGAGTGTTTTCTAACAAGAACACATCACATAAGCACGGTTAATGTTCTGCCAAATTATACAAGCAAATAACGTACAATCATATTCACAGATTGATTTAAAGGAATGTAATCTCCATAATTTACAAAAGAATCTTAGTTTTTAGGTAAATAATATGTCCATATCGCCAGGATGGCCATTTATCTTACGACGCTCCATAGAGAGCATATACTGGATTTTC
*************************************************************************************************************************...((((((....((.((....((((((.((((((((.......(((((((((......))))))).))((((.(((...))).))))..(((............)))...........))))))))....))))))....)).))..))))))*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
......................................................................................................................................................................................................................................................TTCACAGATTGATTTAAAGGAATGTAATC........................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................CGAGGTTGCTTTGTCGTTGAG................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................................ATATTCACAGATTGATTTAAAGGAA.................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................TAATTTACAATAGAACTTTAGTT................................................................................ 23 3 3 0.33 1 0 1 0 0 0
..............................................................................................................................................................................................................................................................................................................................GTCCATATCGACGGGATG.............................................. 18 2 4 0.25 1 0 1 0 0 0
..................................................................................................................................TTTGACGTAGAGTTTGATCC........................................................................................................................................................................................................................................ 20 3 4 0.25 1 0 0 0 1 0
...............................................................................................................................TGTTTTGTCGTTGAGTT.............................................................................................................................................................................................................................................. 17 1 4 0.25 1 0 0 1 0 0
.........................................................................................................................................................................................................................................................................................................................AATATGCACATATCGCCA................................................... 18 2 10 0.10 1 0 0 0 1 0
..................................................................................................................................................................................................................................................................................................................................................CTTTTAACTTACGACGC........................... 17 2 13 0.08 1 0 0 1 0 0
...................................................................................................................................................................................................................................................................................................................................................ATTAGTATTACGACGCTCC........................ 19 3 14 0.07 1 0 0 1 0 0
.......................CAAATTAAATTTGAAGTCCTA.................................................................................................................................................................................................................................................................................................................................................. 21 3 15 0.07 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................CAAAAGAATTCTAGTTTTT............................................................................. 19 2 15 0.07 1 0 1 0 0 0
...............................ATTTGAAGTCTTCAATCTGG........................................................................................................................................................................................................................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 1
..................................................................................................................................................................................................................................................................................................................................................TGTTTATCTCACGACGCT.......................... 18 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

##############################################################################################################################################################################################################################################################################################################################################################################################
ATGTGTTTTCCAAATTAAATGTAGTTTAATTTAAGCTTCAGAAGCTAAACCATACTTGTTTTTATATAAAAAGAAGAATAAAAGCGTGAATAGTATTTGAATAACATTGAATATAAAGTGTGCTCCAACGAAACAGCAACTCAAATTAGGTTATACTATGAAGTTCTCACAAAAGATTGTTCTTGTGTAGTGTATTCGTGCCAATTACAAGACGGTTTAATATGTTCGTTTATTGCATGTTAGTATAAGTGTCTAACTAAATTTCCTTACATTAGAGGTATTAAATGTTTTCTTAGAATCAAAAATCCATTTATTATACAGGTATAGCGGTCCTACCGGTAAATAGAATGCTGCGAGGTATCTCTCGTATATGACCTAAAAG
***********************************************************************************************************...((((((....((.((....((((((.((((((((.......(((((((((......))))))).))((((.(((...))).))))..(((............)))...........))))))))....))))))....)).))..))))))************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M053
female body
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 M024
male body
..................................................................................AGCGTGAATAGTATTTGAATAACATT.................................................................................................................................................................................................................................................................................. 26 0 1 7.00 7 5 2 0 0 0 0 0 0 0 0
.......................................................................AGAAGAATAAAAGCGTGAATAGTATT............................................................................................................................................................................................................................................................................................. 26 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.........................................................................................................................GCTCCAACGAAACAGCAACTCAAATT........................................................................................................................................................................................................................................... 26 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CGTGCCAATTACAAGACGGTTTAATAT............................................................................................................................................................... 27 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAAAGATTGTTCTTGTGTAGTGTATT.......................................................................................................................................................................................... 26 0 1 4.00 4 2 1 1 0 0 0 0 0 0 0
................................................................................................................................CGAAACAGCAACTCAAATTAGGTTAT.................................................................................................................................................................................................................................... 26 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CGTGCCAATAACAAGACGGTTTTT.................................................................................................................................................................. 24 3 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.............................................................................................................................CACCGAAACAGCAACTCAAATTAGGTT...................................................................................................................................................................................................................................... 27 1 1 3.00 3 0 0 0 0 0 3 0 0 0 0
........................................................................................................................................................ATACTATGAAGTTCTCACAAAAGATTGT.......................................................................................................................................................................................................... 28 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CGTGCCAATAACAAGACGGTTTTTT................................................................................................................................................................. 25 3 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TTATTGCATGTTAGTATAAGTGTCT................................................................................................................................ 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..........................................................................AGAATAAAAGCGTGAATAGTATTTGAAT........................................................................................................................................................................................................................................................................................ 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................CGAAACAGCAAATCAAATTAGGTTAT.................................................................................................................................................................................................................................... 26 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACAAGACGGTTTAATATGTTCGTT........................................................................................................................................................ 24 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
.......................................................................AGAAGAAGAAAAGCGTGAATAGTATTT............................................................................................................................................................................................................................................................................................ 27 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................................CGTGCCAATTACAAGACGGTTTAAT................................................................................................................................................................. 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTGTGTAATGTATTCGTGCCAATTA............................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................CCAACGAAACAGCAACTCAAATTAGGTT...................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CAATTACAAGACGGTTTAATATGTTCAT......................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................AGATTGTTCTTGTGTAGTGTATTCGT....................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................ATACTATGAAGTTCTCACAAAAGATTGTT......................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TCGTGCCAATAACAAGACGGTTTTTT................................................................................................................................................................. 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................ACGAAACAGCAACTCAAATTAGGTTATA................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATGTTCGTTTATTGCATGTTAGTAT........................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CTCACAAAAGATTGTTCTTGTGTAGTGT............................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..............................TTAAGCTTCAGAAGCAAAACCATACT...................................................................................................................................................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................AGAATAAAAGCGTGAATAGTATTT............................................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................ATAAAAAGAAGAAGAAAAGCGTGAAT................................................................................................................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ATTGCATGTTAGTATAAGTGTCTA............................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................CTCAAATTAGGTTATACTATGAAGTTCTCAC.................................................................................................................................................................................................................... 31 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................TCCAACGAAACAGCAAATCAAATT........................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0
...............................................................................AAAAGCGTGAATAGTATTTGAATAACATT.................................................................................................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................GCTCCAACGAAACAGCAATTCAAATTA.......................................................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................TCCAACGAAACAGCAAC.................................................................................................................................................................................................................................................. 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................CATTGAATATAAAGTGTGCT.................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................................................................................TGCGAGGTATCTCTCGTATATGACCT..... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTAATATGTTCATTTATTGCGTGTT............................................................................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTAATATGTTCATTTATTGCGTGTTAGT.......................................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CTATGAAGTTCTCACAAAAGATTGTT......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................TTGAAGTTCTCACGAAAGAT............................................................................................................................................................................................................. 20 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................CTGCGAGGTATCTCTCGTATATGACCT..... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................ATAAAAAGAAGAAGAAAAGCGTGAATAGT................................................................................................................................................................................................................................................................................................ 29 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................CGTGCCAATTACAAGACGGTTTAATGT............................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................ATAACATTGAATATAAAGTGTGCTCCA............................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................AAAAAGAAGAATAAAAGCGTGAAT................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................AAAAAGAAGAATAAAAGCGTGAATAGT................................................................................................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................TTGAATAACATTGAATATAAATTGTGCT.................................................................................................................................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CGTGCCAATTACAAGACGGTTTAATATGTT............................................................................................................................................................ 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TGTATTCGTGCCAATTACAAGACGGTT..................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................AAGCGTGAATAGTATTTGAATAACATT.................................................................................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................ATTTGAATAACATTGAATATAAATTGT..................................................................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAAAGATTGTTCTTGTGTAGTGTAT........................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................TAGAGGTATTAAATGTTTTCTTAGAAT................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................CAAAAGATTGTTCTTGTGTAGTGTATT.......................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CAATTACAAGACGGTTTAATA................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................................TGAGAAGAAGAATAAAAGCGTGAATAGTAT.............................................................................................................................................................................................................................................................................................. 30 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................ATTCGTGCCAATAACAAGACGGTTTTT.................................................................................................................................................................. 27 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TCGTGCCAATAACAAGACGGTTTTT.................................................................................................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TATGAAGTTCTCACAAAAGATTGTT......................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAAAGATTGTTCTTGTGTAGTGTATTCGT....................................................................................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................CCATTTATTATACAGGTATAGCGGT................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTACAAGACGGTTTAATATGTTCGT......................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............................TTAAGCTTCAGAAGCTAAACCATACTT..................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................................................................................................AAATAGAATGCTGCGAGGTAT..................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................TCAAATTAGGTTATACTATGAAGT.......................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAAAGATTGTTCTTGTGTAGTGTATTCGT....................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................TTAAAAAGAAGAAGAAAAGCGTGAAT................................................................................................................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................AACGAAACAGCAACTCAAATTAGGTTAT.................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TTAATATGTTCATTTATTGCGTGT.............................................................................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCGTTTATTGCATGTTAGTATAAG..................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................ACCGAAACAGCAACTCAAATTAGGT....................................................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................CAAATTAGGTTATACTATGAAGTTC........................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................TTGTTTTTATATAAAAAGAAGAATAA............................................................................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................AGAAGAATAAAAGCGTGAATAGTATTT............................................................................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TCACAAAAGATTGTTCTTGTGTAGTGTATT.......................................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GTGTAGTGTATTCGTGCCAATT................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAAAGATTGTTCTTGTGTAGTGTATTCG........................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GCCAATTACAAGACGGTTTAATATGT............................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................CACCGAAACAGCAACTCAAATTAGGT....................................................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................TCGTGCCAATTACAAGACGGTTTA................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................GTGTGCTCCAACGAAACAGCAAC.................................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................................................................................................................................................................GAGGTACCTCTCGTATATGACC...... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................ATTCGTGCCAATTACAAGACGGTT..................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................GTGCTCCAACGAAACAGCAACTCAA.............................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................AAGCGTGAATAGTATTTGAATAACAT................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................ATGAAATTCTCACAAAAGTTCGTT......................................................................................................................................................................................................... 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................ATGAAGTTCTCACAAAAGATTGTTCT....................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................AGAAGAATAAAAGCGTGAATAGTAT.............................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CGTGCCAATTACAAGACGGTTTAATA................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAAAGATTGTTCTTGTGT.................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................ATTGTTTTTGTATAGTGTATT.......................................................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................AAGTTTGTTCTTATGTAGT............................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................AAATATTTTCTTAGAATCGAT............................................................................... 21 3 12 0.17 2 0 0 0 0 2 0 0 0 0 0
.................................................................................AAGCGTGAATACTAT.............................................................................................................................................................................................................................................................................................. 15 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................CGAGGTATCTGACGTATA........... 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................................AGACGGTTTAATTTGT............................................................................................................................................................. 16 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................ACAGAGTGCTGTGAGGTAT..................... 19 3 14 0.07 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................AGCTCCAAAGAAACAG...................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................................................................................................................................................AGAATGCTGCCAGCTA...................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:18151905-18152286 + dsi_14823 TACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAGGTTTAATTTACATCAAATTAAATTCGAAG----------------------------------------------------------------TCTTCGATT--------------------------------------------------------------------TGGTATGAACAAAAATATATTTT--TCTTCTTATTTTCGCACTTATCATAAACT-TATTGTAACTTATATTTCACACGAGGTTGCTTTGTCGT--T--GAGTTTAATCCAATATGATACTTCAAGAGTG--TTTTCTAACAAGAACACA--TCACATAAGCACGG-----------TTAA-----------------------TGTTCTGCCAAATTATA-CAAGCAAATAACGTACAATCATATTCACAGATTGATTTAAAGG---------------------------------AATGTAATCTCCATAATTTACAAAAGAAT---------------------------------------------------------------CTT--AGTTTTTAGGTAAATAATATGTCCATATCGCCAGGATGGCCATTTATCTTACGACGCTCCATAGAGAGCATATACTGGATTTTC
droSec2 scaffold_9:923106-923487 + TACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAGGTTTAATTTACATAAATTTAAATTCGAAG----------------------------------------------------------------TCTTCGATT--------------------------------------------------------------------TGGTATGAACAAAAATATATTTT--TCTTCTTATTTTCGCACTTATCATAAACT-TATTGTAACTTATATTTAACACGAGGTTGCTTTGTCGT--T--GAGTTTAATCCAATATGATACTTCAAGAGTG--TTTTCTAACAAGAACACA--TCACATAAGCACGG-----------TTAA-----------------------TGTTCTGCCAAATTATA-CAAGCAAATAACGTATAATCATATTCACAGATTGATTTAACGG---------------------------------AATGTAATCTCCATAATGTACAAAAGAAT---------------------------------------------------------------CTT--AGTTTTTAGGTAAATAATATGTCCATATCGCCAGGATGGCCGTTAATCTTACGACGTTCCATAGAGAGCATATACTGGATTTTC
dm3 chr2R:17597313-17597698 + TACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAGGTTTAATTTACATAAATTTAAATTCGAAT----------------------------------------------------------------TTTTCGATT--------------------------------------------------------------------TGGTATGAACAAAAATATATTTT--TCTTC---------CACTTATCATAAA-T--TATATAACTTATATATAACATGAGGTTGCTTTGTCGT--T--GATTTTAATCCAATATGATACTTCAAGAGTG--TTTTTAAACAAGAACACACAGCACATAAGCATGG-----------TTAATT-GTACA-------AT-GAAGATTTTCTGCCAAATTATA-CAAGCAGATAACGTATAACCATATTCACAGATTCATTTAAAGG---------------------------------AATGTAATCTCCACCATTTTCAAAAGAAA---------------------------------------------------------------CTT--AGTTTTTAGTTAGA-AATATGTCCATATCGCCAGGATGACCGTTAATCTTACGACGCTCCATAGAGAGCATATACTGGATTTTC
droEre2 scaffold_4845:11746095-11746451 + ACTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC------TTA-----------------------------ATACTATCTTAAGTAATACAATGTTTTGGACTTT----------------------------------------------------------------------------------------------GTATGATGTGATATGAACA----TACATTTTAATTTTC---------CAATATTCAT---TT-TTTTGTAACTTATATATTATATGAGGTTGCTTCGTCAT--T--GAGTTTAACGCCATATGGTACTT----AGTG--TTTTCCAACAAGAACACA--GCACAAGAGCCTTG-----------TAAAT--------TGAGCAATCAAAGATGTTTTGCCA----------------------AAAGTTATATTCACAGATTCATTTTAAGG---------------------------------AATGTAATCTCAATAATTTACAAAA-------------------------------------------------------------------CAT--AGATTTCAGTTAAATAACATATCCATATCGACAGGATGGCCGTTAATCTTACGACGCTCCATAGAGAGCATATACTGGATTTTC
droYak3 2R:11573234-11573613 - ACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTCA----AATGTTTATTGGAAGTCTGTACAATTGCTTAAGT-------------------------------------------------------------------------------------------------------AACAAACGACTGAATGATGTGATATGAACATAA-----TTTTGATTTTT---------CATTATTAAT---TTTCTTAGTAACTTATACTTAATATGAGGTTGCCTTGCCTT--T--AAGT-----ACAATATGATACTT----GGTG--TTCTCCAACAAGAACACA--GCACATAAGTCTGC-----------CTAA-------TTTAAGAAAT-AAA---GATCTGCCAAATTATA-CAATTAGATAACGTATCACCATATTCACAGATTCAT--AAAGG---------------------------------AATGTAATCTCCATAGTTTACCAAAGAAA---------------------------------------------------------------CTT--AGATTTTAG---A---ATATATCCATATCGCCAGGATGGCCATTAATCTTACGACGCTCCATAGAGAGCATATACTGAATTTTC
droEug1 scf7180000409672:7416529-7416946 + TATTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTGATTT----------------------------------------------------AGCCTTATTCTGTAGAAATGTTAAAACCCATAGCTTCGATTTAAAATAAAATACAAGCCAAAGCAATTAAAGTAAAACTCAGTTTTAAGAATCAAATGACTGGAT-----------------------TTTT--TATTTTTATTATT-AAGAAACCATTAA-G--GTCTTAGCTTAAATTTAAAATTAGGATTCCCAATAAT--TCCTATTTCGAGGCAATATATAACTTCAA----GTGCTA--CATAAAAAACGCAGGACTCATAATTTT----------------------------------------------TTTAAATGGTT-CCAAAGGTTTTCCTACAATTATATTCACAGATAAGTTTTA-GG---------------------------------AATGATCTTTTT--------------------------AAAA-----------AAGATA-------------ACTCA--------GA-TA-----ACGTTTTTCAGTTAA---AAATATCCACATTTCCAGAGTGGCCGTTAATCTTGCGGCGCTCCATGGAGATCATATACTGGATCTTA
droBia1 scf7180000301754:4699349-4699663 + ATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTACCTATAAGTGAGATGAGGTCTCTTTTCAGTTTT--GAGTCTAACGCAAAAGCTAACAGCAAAAGTG--TTTTCCAAAGAAAAC-----------TATCTTGG-----TTAGTT------CTTAAACT--------AAGGATATTCTTTCAAGTTATT-TA-ACAAATAACTGAGAATCGTATTCACAGATAAGTTCTAAGA---------------------------------AATGTCCTTTTT--------------------------GAGTATGAAAAACAAAAGATATCTTGAGACAG--GATCT----GCCT-----C-GCT--GCTTTTCAGTTAA---AGATATCCACATCGCACGAGTGACCGCCTATCTTGCGGCGCTCCATGGAGATCATGTACTGGATTTTG
droTak1 scf7180000415238:324979-325178 + AAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTTTCAAGTTATTCCAATTAAATAACTTAGAATCGTATTCACAGATAAGTTGTAAGG---------------------------------AATGCACTTCTTATAAATTACAAAATGAA-AC-TTCTTTAGA-----------------------TCCTG--ACTCT--------GT-CC-----TTGGTTATTAGTTAA---AGATATCCACATCGCACGAGTGACCGCCAATCTTGCGACGCTCCATGGAGATCATGTACTGAATCTTG
droEle1 scf7180000491186:249531-249886 + AAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA-----------------------------ATTTTCTCTTCATTCAAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---TT-TTTTGTAACTTATATTTTGGATAAGGATTTTTTACAAT-------------------A-------------------TTTTTTACAAGAATAT----TAAAATA----G------------------CTTAAATT--------AAGGAAGTTCTTTCAAATTATT-CAATCAAATAAC-TAGAATCGTATTCACAGATATGGTTTCGTTCAGTGCAAGATGTTATTATACAAAGTCGTGCAAAAAGTATTTCTTGAAAGTTAGAAAA----GACATTATTAAGATTTC--AACATAAAATAACTT------G--GGTGTGTCTTTTT-----CAACT--GGTTTTTAGTTAA---ACATATCCACATCGTTAGGGTGACCATTAATCTTACGGCGCTCCATCGAGATCATATACTGGATTTTA
droRho1 scf7180000778867:2964-3226 - G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG--CTCTCAAAAAAAAAAACA--GCCAATAAGCATATGTAGAT-TGCT------CTTAAATT--------AAGGAAGCTCTTTTAAATTATC-AAAACAGATCACTTAGAATCGTATTCTCAGATATGGCTT-------------------TTATACT---TCGCGCAAAATTAAATACATA-CAATTACAA----ATAATATTTATAAGA-----------------------TCCTTCATCTC--------------CATCT--AGTTTTTAGTTAA---ACATATCCACATCGCCAGAGTAACCACTAATTTTACGGCGCTCCATGGAGATCATGTACTGGATTTTG
droFic1 scf7180000454066:3418176-3418519 + ATTTCAAAAATATTAGTGCCTTGCGTTAGTTTCGGAAAATTCAGTAAG----------------------------ACC-CACTGT--------------------------AATTTCTGATAAGGACCACAATATGAATAACAATTTGTTGTTTAGCTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--GAA-TCAACACATTTTTAAATTTCCTAAGCA-------TAATATAAACATA--AGATAAAAAAATGT-----------TTAA------------------------------------AAAA-TAAACATTTAACTTAGAATATTATCTACAGATTGATTTTTGGTT----------------------------------------------GGTGCAGATATGAATATTATTTGCTGGG-----------------------CAATGCAACTCT--------GTATT-----CCTCTGATTAGTTAA---ACATATCTACTTCATTTGAGTGGCCTCCAATCTTTCGGCGCTCCATGGATATCATGTACTGGATCTTA
droKik1 scf7180000302366:354579-355031 - ACTA-A-----------GACTTATGTTATATTTATATCATTTAAACAGAAGCTTTTTAAAAAAAAAAGATATTCAGACTATGCTGTCACTTATTTCTCAAGACTTTAAATTGAACTGATGATA-TGACTCCAAAAACAATAATC-TTGGGAGCTCAGCCCAATAAATTCAAAATAAAGTTCAGCCTCTTAAGCATAGCTTAATTGGATATGGATATTTACAGATTAGTTTTTTCTTACATTTTTCCTTAAAATAAAAAGCACAACGATTAAGGAACGAGGAAATATCATTAGAAGACATGATCGTTTTCATAGATCACTACTACTGTGTAGTTTTTTTTTTAGCTTCAAATTTCAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTGAA---------------------------------------------------------------------------------------------------------AGTC-----------------------------------------------------------------------------------CTAGCAAAT-------ATGG---------------------------------CAT--------------------------------------------------------------------------------------------GCTTTTCTTAGTTAA---ACATATCCACCTCGTTGGAGTGACCATTAATCTTGCGACGCTCCATTGAAATCATATACTGGATCTTT
droAna3 scaffold_13266:10996283-10996351 + A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGTTCACGTCCGTGGAATGGCCCGAAATCTTTCGTCTCTCCACCGCGAGCATGTACTGGATCTTC
droBip1 scf7180000396547:1468542-1468610 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGTTCACGTCTGTGGAATGACCCGAGATCTTACGTCTTTCCACGGCCAGCATGTACTGGATTTTC
dp5 3:15164030-15164098 + A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATTCATATCGCCCGCATGTCCGTTGATCTTGCGACGTTCCATGGAGAGTATGTACTGGATCTTG
droPer2 scaffold_4:3886890-3886958 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATTCATATCGCCCGCATGTCCGTTGATCTTGCGACGTTCCATGGAGAGTATGTACTGGATCTTA
droWil2 scf2_1100000004514:2862164-2862232 + A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATTCACATCAGTCGTATGGCCATTTATCTTGCGACGTTCCATGGATAGTAAGTACTGTATTTTC
droVir3 scaffold_12875:10148854-10148929 + TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCAA---AGAAGTTCGCCTCGGTCGTGTCACCGCCAATCCTACGACGCTCCATCGATAGCATATACTGAATCTTG
droMoj3 scaffold_6496:16869066-16869143 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAGTAA---ATAGATTTACCTCTGTGGTATCGCCGCTGATCTTGCGACGCTCCACTGAGAGCATATACTGAATTTTG
droGri2 scaffold_15245:3308093-3308131 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCGGCGACGTTCCGTCGATAGCATGTACTGAATCTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAGGTTTAATTTACATCAAATTAAATTCGAAG----------------------------------------------------------------TCTTCGATT--------------------------------------------------------------------TGGTATGAACAAAAATATATTTT--TCTTCTTATTTTCGCACTTATCATAAACT-TATTGTAACTTATATTTCACACGAGGTTGCTTTGTCGT--T--GAGTTTAATCCAATATGATACTTCAAGAGTG--TTTTCTAACAAGAACACA--TCACATAAGCACGG-----------TTAA-----------------------TGTTCTGCCAAATTATA-CAAGCAAATAACGTACAATCATATTCACAGATTGATTTAAAGG---------------------------------AATGTAATCTCCATAATTTACAAAAGAAT---------------------------------------------------------------CTT--AGTTTTTAGGTAAATAATATGTCCATATCGCCAGGATGGCCATTTATCTTACGACGCTCCATAGAGAGCATATACTGGATTTTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACAGATTGATTTAAAGG---------------------------------AATGTAATC............................................................................................................................................................................2911.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGTTGCTTTGTCGT--T--GAG.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCACAGATTGATTTAAAGG---------------------------------AA...................................................................................................................................................................................2511.00100000001000000000
droSec2
TACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAGGTTTAATTTACATAAATTTAAATTCGAAG----------------------------------------------------------------TCTTCGATT--------------------------------------------------------------------TGGTATGAACAAAAATATATTTT--TCTTCTTATTTTCGCACTTATCATAAACT-TATTGTAACTTATATTTAACACGAGGTTGCTTTGTCGT--T--GAGTTTAATCCAATATGATACTTCAAGAGTG--TTTTCTAACAAGAACACA--TCACATAAGCACGG-----------TTAA-----------------------TGTTCTGCCAAATTATA-CAAGCAAATAACGTATAATCATATTCACAGATTGATTTAACGG---------------------------------AATGTAATCTCCATAATGTACAAAAGAAT---------------------------------------------------------------CTT--AGTTTTTAGGTAAATAATATGTCCATATCGCCAGGATGGCCGTTAATCTTACGACGTTCCATAGAGAGCATATACTGGATTTTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTTTGTCGT--T--GAGTTTAA....................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
dm3
TACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAGGTTTAATTTACATAAATTTAAATTCGAAT----------------------------------------------------------------TTTTCGATT--------------------------------------------------------------------TGGTATGAACAAAAATATATTTT--TCTTC---------CACTTATCATAAA-T--TATATAACTTATATATAACATGAGGTTGCTTTGTCGT--T--GATTTTAATCCAATATGATACTTCAAGAGTG--TTTTTAAACAAGAACACACAGCACATAAGCATGG-----------TTAATT-GTACA-------AT-GAAGATTTTCTGCCAAATTATA-CAAGCAGATAACGTATAACCATATTCACAGATTCATTTAAAGG---------------------------------AATGTAATCTCCACCATTTTCAAAAGAAA---------------------------------------------------------------CTT--AGTTTTTAGTTAGA-AATATGTCCATATCGCCAGGATGACCGTTAATCTTACGACGCTCCATAGAGAGCATATACTGGATTTTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAA---------------------------------------------------------------CTT--AGTTTTTAGTTAGA-.....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTTAATCTTACGACGCTCCATAGA...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTT--TCTTC---------CACTTATCATA............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATATGTCCATATCGCCACT.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAGGTTGCTTTGTCGT--T--G...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACATGAGGTTGCTTTGTCGT--...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA-CAAGCAGATAACGGT..................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTGTCGT--T--GATTTCC.....................................................................................................................................................................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC------TTA-----------------------------ATACTATCTTAAGTAATACAATGTTTTGGACTTT----------------------------------------------------------------------------------------------GTATGATGTGATATGAACA----TACATTTTAATTTTC---------CAATATTCAT---TT-TTTTGTAACTTATATATTATATGAGGTTGCTTCGTCAT--T--GAGTTTAACGCCATATGGTACTT----AGTG--TTTTCCAACAAGAACACA--GCACAAGAGCCTTG-----------TAAAT--------TGAGCAATCAAAGATGTTTTGCCA----------------------AAAGTTATATTCACAGATTCATTTTAAGG---------------------------------AATGTAATCTCAATAATTTACAAAA-------------------------------------------------------------------CAT--AGATTTCAGTTAAATAACATATCCATATCGACAGGATGGCCGTTAATCTTACGACGCTCCATAGAGAGCATATACTGGATTTTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGG---------------------------------AATGTAATCTCAAT.......................................................................................................................................................................2011.0011000000
droYak3
ACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTCA----AATGTTTATTGGAAGTCTGTACAATTGCTTAAGT-------------------------------------------------------------------------------------------------------AACAAACGACTGAATGATGTGATATGAACATAA-----TTTTGATTTTT---------CATTATTAAT---TTTCTTAGTAACTTATACTTAATATGAGGTTGCCTTGCCTT--T--AAGT-----ACAATATGATACTT----GGTG--TTCTCCAACAAGAACACA--GCACATAAGTCTGC-----------CTAA-------TTTAAGAAAT-AAA---GATCTGCCAAATTATA-CAATTAGATAACGTATCACCATATTCACAGATTCAT--AAAGG---------------------------------AATGTAATCTCCATAGTTTACCAAAGAAA---------------------------------------------------------------CTT--AGATTTTAG---A---ATATATCCATATCGCCAGGATGGCCATTAATCTTACGACGCTCCATAGAGAGCATATACTGAATTTTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TATTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTGATTT----------------------------------------------------AGCCTTATTCTGTAGAAATGTTAAAACCCATAGCTTCGATTTAAAATAAAATACAAGCCAAAGCAATTAAAGTAAAACTCAGTTTTAAGAATCAAATGACTGGAT-----------------------TTTT--TATTTTTATTATT-AAGAAACCATTAA-G--GTCTTAGCTTAAATTTAAAATTAGGATTCCCAATAAT--TCCTATTTCGAGGCAATATATAACTTCAA----GTGCTA--CATAAAAAACGCAGGACTCATAATTTT----------------------------------------------TTTAAATGGTT-CCAAAGGTTTTCCTACAATTATATTCACAGATAAGTTTTA-GG---------------------------------AATGATCTTTTT--------------------------AAAA-----------AAGATA-------------ACTCA--------GA-TA-----ACGTTTTTCAGTTAA---AAATATCCACATTTCCAGAGTGGCCGTTAATCTTGCGGCGCTCCATGGAGATCATATACTGGATCTTASizeHit CountTotal NormTotal
No Reads
droBia1
ATATAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTACCTATAAGTGAGATGAGGTCTCTTTTCAGTTTT--GAGTCTAACGCAAAAGCTAACAGCAAAAGTG--TTTTCCAAAGAAAAC-----------TATCTTGG-----TTAGTT------CTTAAACT--------AAGGATATTCTTTCAAGTTATT-TA-ACAAATAACTGAGAATCGTATTCACAGATAAGTTCTAAGA---------------------------------AATGTCCTTTTT--------------------------GAGTATGAAAAACAAAAGATATCTTGAGACAG--GATCT----GCCT-----C-GCT--GCTTTTCAGTTAA---AGATATCCACATCGCACGAGTGACCGCCTATCTTGCGGCGCTCCATGGAGATCATGTACTGGATTTTGSizeHit CountTotal NormTotal
No Reads
droTak1
AAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTTTCAAGTTATTCCAATTAAATAACTTAGAATCGTATTCACAGATAAGTTGTAAGG---------------------------------AATGCACTTCTTATAAATTACAAAATGAA-AC-TTCTTTAGA-----------------------TCCTG--ACTCT--------GT-CC-----TTGGTTATTAGTTAA---AGATATCCACATCGCACGAGTGACCGCCAATCTTGCGACGCTCCATGGAGATCATGTACTGAATCTTGSizeHit CountTotal NormTotal
No Reads
droEle1
AAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA-----------------------------ATTTTCTCTTCATTCAAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---TT-TTTTGTAACTTATATTTTGGATAAGGATTTTTTACAAT-------------------A-------------------TTTTTTACAAGAATAT----TAAAATA----G------------------CTTAAATT--------AAGGAAGTTCTTTCAAATTATT-CAATCAAATAAC-TAGAATCGTATTCACAGATATGGTTTCGTTCAGTGCAAGATGTTATTATACAAAGTCGTGCAAAAAGTATTTCTTGAAAGTTAGAAAA----GACATTATTAAGATTTC--AACATAAAATAACTT------G--GGTGTGTCTTTTT-----CAACT--GGTTTTTAGTTAA---ACATATCCACATCGTTAGGGTGACCATTAATCTTACGGCGCTCCATCGAGATCATATACTGGATTTTASizeHit CountTotal NormTotal
No Reads
droRho1
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG--CTCTCAAAAAAAAAAACA--GCCAATAAGCATATGTAGAT-TGCT------CTTAAATT--------AAGGAAGCTCTTTTAAATTATC-AAAACAGATCACTTAGAATCGTATTCTCAGATATGGCTT-------------------TTATACT---TCGCGCAAAATTAAATACATA-CAATTACAA----ATAATATTTATAAGA-----------------------TCCTTCATCTC--------------CATCT--AGTTTTTAGTTAA---ACATATCCACATCGCCAGAGTAACCACTAATTTTACGGCGCTCCATGGAGATCATGTACTGGATTTTGSizeHit CountTotal NormTotal
No Reads
droFic1
ATTTCAAAAATATTAGTGCCTTGCGTTAGTTTCGGAAAATTCAGTAAG----------------------------ACC-CACTGT--------------------------AATTTCTGATAAGGACCACAATATGAATAACAATTTGTTGTTTAGCTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--GAA-TCAACACATTTTTAAATTTCCTAAGCA-------TAATATAAACATA--AGATAAAAAAATGT-----------TTAA------------------------------------AAAA-TAAACATTTAACTTAGAATATTATCTACAGATTGATTTTTGGTT----------------------------------------------GGTGCAGATATGAATATTATTTGCTGGG-----------------------CAATGCAACTCT--------GTATT-----CCTCTGATTAGTTAA---ACATATCTACTTCATTTGAGTGGCCTCCAATCTTTCGGCGCTCCATGGATATCATGTACTGGATCTTASizeHit CountTotal NormTotal
No Reads
droKik1
ACTA-A-----------GACTTATGTTATATTTATATCATTTAAACAGAAGCTTTTTAAAAAAAAAAGATATTCAGACTATGCTGTCACTTATTTCTCAAGACTTTAAATTGAACTGATGATA-TGACTCCAAAAACAATAATC-TTGGGAGCTCAGCCCAATAAATTCAAAATAAAGTTCAGCCTCTTAAGCATAGCTTAATTGGATATGGATATTTACAGATTAGTTTTTTCTTACATTTTTCCTTAAAATAAAAAGCACAACGATTAAGGAACGAGGAAATATCATTAGAAGACATGATCGTTTTCATAGATCACTACTACTGTGTAGTTTTTTTTTTAGCTTCAAATTTCAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTGAA---------------------------------------------------------------------------------------------------------AGTC-----------------------------------------------------------------------------------CTAGCAAAT-------ATGG---------------------------------CAT--------------------------------------------------------------------------------------------GCTTTTCTTAGTTAA---ACATATCCACCTCGTTGGAGTGACCATTAATCTTGCGACGCTCCATTGAAATCATATACTGGATCTTTSizeHit CountTotal NormTotal
No Reads
droAna3
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGTTCACGTCCGTGGAATGGCCCGAAATCTTTCGTCTCTCCACCGCGAGCATGTACTGGATCTTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGTTCACGTCTGTGGAATGACCCGAGATCTTACGTCTTTCCACGGCCAGCATGTACTGGATTTTCSizeHit CountTotal NormTotal
No Reads
dp5
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATTCATATCGCCCGCATGTCCGTTGATCTTGCGACGTTCCATGGAGAGTATGTACTGGATCTTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATTCATATCGCCCGCATGTCCGTTGATCTTGCGACGTTCCATGGAGAGTATGTACTGGATCTTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATTCACATCAGTCGTATGGCCATTTATCTTGCGACGTTCCATGGATAGTAAGTACTGTATTTTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATCAGTCGTATGGCC...........................................1811.00110000
droVir3
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCAA---AGAAGTTCGCCTCGGTCGTGTCACCGCCAATCCTACGACGCTCCATCGATAGCATATACTGAATCTTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAA---AGAAGTTCGCCTCGG.....................................................2111.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAGTAA---ATAGATTTACCTCTGTGGTATCGCCGCTGATCTTGCGACGCTCCACTGAGAGCATATACTGAATTTTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCACTGAGAGCATATACTGAATTT..2611.001000010
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCGGCGACGTTCCGTCGATAGCATGTACTGAATCTTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:25 AM