ID:

dsi_14814

 Coordinate:

3l:8568850-8569033 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3l_8569034_8569756_+]; CDS [3l_8569034_8569756_+]; exon [3l_8568712_8568849_+]; CDS [3l_8568712_8568849_+]; intron [3l_8568850_8569033_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGCGGCGGCCAATGGAATCTTCGCTGCTCTCGAGCAGCGGGAGGGACTGGGTAAGTTCTTGATCTAAGATCCTAATTTGTTTACACAAGCTGCTTTTGACTTGAGCGACTAACTAACTTGTGATTCTCTCTCCCACCGAAACGCTAATCACTGTGTGTATTATTGTCCCGCTGTTCACCCGCTGATCATGCTAACCACAACCAAACAAAAAACACCATACCATGCCAAAAACAGGCCAAATTGTAACCGCCATACCCGCCACCATTCAAACCGGCGACAGTCCG
**************************************************..........((((...))))....(((((((.((((((.(((((.......))))).........))))))..................((((........))))......((((...((((.(((.....))).)).)).....))))..))))))).........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
.........................GCTCTCGAGCAGCGGGAGGGACTG........................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................AAGCTCTTGATCTAAG........................................................................................................................................................................................................................ 16 1 1 1.00 1 0 0 1 0 0 0 0 0 0
....................TCGCTGCTCTCGAGCAGCGGGAGGGACT............................................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
GGCGGCGGCCAATGGAATCTTC...................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................CATACCCGCCACCATTCAAACCGGCGAC...... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........CAATGGAATCTTCGCTGCTCG.............................................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................CAAATTGTAACCGCCATACCCGC......................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................TTCGCTGCTCTCGAGCAGCGGGAGGGACT............................................................................................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................TTCGCTGCTCTCGAGCAGCGGGAGGGAC............................................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................CCGGAAGGACTGGGTAA...................................................................................................................................................................................................................................... 17 2 6 0.50 3 0 0 2 0 1 0 0 0 0
..........................................................................................................................TTTCTCTCTCCTACGGAAACG............................................................................................................................................. 21 3 2 0.50 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................GCCACCATTTAAACGGGC......... 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0
..................................................GTAAGCTCTTGATCGAA......................................................................................................................................................................................................................... 17 2 13 0.15 2 0 0 0 0 0 2 0 0 0
........CCAATGGTACCTTCGGTGC................................................................................................................................................................................................................................................................. 19 3 7 0.14 1 0 0 0 0 0 0 1 0 0
............................................................................................................GTAACTGACTTGTGATGCT............................................................................................................................................................. 19 3 16 0.13 2 1 0 0 0 0 0 0 0 1
........................................................................................................................TGATAATCTTTCCCACCGAA................................................................................................................................................ 20 3 8 0.13 1 0 0 1 0 0 0 0 0 0
.....................................CCGGAAGGACTGGGTA....................................................................................................................................................................................................................................... 16 2 19 0.11 2 0 0 2 0 0 0 0 0 0
.....................................CGTGAGGGACTGGGT........................................................................................................................................................................................................................................ 15 1 20 0.10 2 0 0 0 0 0 0 0 2 0
..........................................CGGACTGGATAAGTTTTTG............................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0
.......................................GGAAGGACTGGGTAAT..................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0
......................................CGGAAGGACTGGGTAA...................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

CCGCCGCCGGTTACCTTAGAAGCGACGAGAGCTCGTCGCCCTCCCTGACCCATTCAAGAACTAGATTCTAGGATTAAACAAATGTGTTCGACGAAAACTGAACTCGCTGATTGATTGAACACTAAGAGAGAGGGTGGCTTTGCGATTAGTGACACACATAATAACAGGGCGACAAGTGGGCGACTAGTACGATTGGTGTTGGTTTGTTTTTTGTGGTATGGTACGGTTTTTGTCCGGTTTAACATTGGCGGTATGGGCGGTGGTAAGTTTGGCCGCTGTCAGGC
**************************************************..........((((...))))....(((((((.((((((.(((((.......))))).........))))))..................((((........))))......((((...((((.(((.....))).)).)).....))))..))))))).........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 M053
female body
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR1275487
Male larvae		 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
.................................................................................................................................................................................................AGGTGTTGGTTTATTTTTTGCGGT................................................................... 24 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ACAGGACGTCAAGTGGGCTAC.................................................................................................... 21 3 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ACAGGGCGTCAAGTGTGCTACT................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................CTAGCTTCTAGGATTAAA.............................................................................................................................................................................................................. 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................ACTATTAGAAAGGGTGGCTT................................................................................................................................................ 20 3 8 1.00 8 6 0 0 0 0 1 0 1 0 0 0
....................................................................................................................................................................CAGGGCGTCAAGTGTGCTACT................................................................................................... 21 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
............................................CTGACCCATTCAAGAAG............................................................................................................................................................................................................................... 17 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................GGGCGACAAATGGGCG...................................................................................................... 16 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................GCGGTATGGGCGTTGGTGAGGT............... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ACAGGACGTCAAGTGTGCGAC.................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................CTAAGTTTGGCCGCT....... 15 1 5 0.40 2 0 0 0 0 0 2 0 0 0 0 0
.....................................................................................................................................................................AGGGCGTCAAGTGTGCTAC.................................................................................................... 19 3 12 0.25 3 0 0 0 2 0 0 0 0 1 0 0
............................................................................................................................................................................................................TGTTGTTTGAGGTAAGGTACGGT......................................................... 23 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................TAGCTTCTAGGATTAAATGA........................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................AGGGTGGGTTTGCGAAT......................................................................................................................................... 17 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................TCAATTGGGCGACTAGT................................................................................................ 17 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TTTTTGAGGTATGGTAAGGA......................................................... 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................ACAGGGCGTCAAGTGTGCT...................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 0 1 0 0
......................CGACGAGAGCTTGTAGCCA................................................................................................................................................................................................................................................... 19 3 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................GGTAAGTTTGGCTTCTGT..... 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
.................................................CCATTCAGGAGCTAGA........................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................................TGGTACGGTTTTAGTCTTG............................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
...CCGGCTGTTGCCTTAGAAG...................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................CAGGACGTCAAGTGTGCGA..................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:8568800-8569083 + dsi_14814 GGCGGCGGCCAATGGAATCTTCGCTGCTCTCGAGCAGCGGGAGGGACTGGGTAAGTTCTTGA--T-C----TA------AGA-------TCCTAATTTGTTT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-C----------AAAAAACACCA-----TACCAT-------------GC-CAAA--------AACAGGCCAAATTGTAACCGCCATACCCGCCACCATTCAAACCGGCGACAGTCCG
droSec2 scaffold_0:1056694-1056977 + GGCGGCGGCCAATGGAATCTTCGCTGCTCTCGAGCAGCGGGAGGGACTGGGTAAGTTCTTGA--T-C----TA------AGA-------TCCTAATTTGTTT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------AATAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-C----------AAAAAACACCA-----TACCAT-------------GC-CAAA--------AACAGGCCAAATTGTAACCGCCATACCCGCCACCATTCAAACCGGCGACAGTCCG
dm3 chr3L:8779488-8779771 + GGCGGCGGCCAATGGAATCTTTGCTGCTCTCGAGCAGCGGGAGGGACTGGGTAAGTTCTTGA--T-C----TA------AGA-------TCCTAATTTGTTT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-C----------AAAAAACACCA-----TACCAT-------------GC-CAAA--------AATAGGCCAGATTGTAACCGCCATACCCGCTACCATTCAAACCGGCGATAGTCCG
droEre2 scaffold_4784:5260316-5260601 - GGCGGCTGCCAATGGAATCTTCGCTGCTCTCGAGCAGCGCGAGGGACTGGGTAAGTACTCGG--T-G----TA------AAG-------TCATAGTTAATGT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCCAATAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-CA-----AAAC---AAACACCA-----TACCAT-------------GC-CGCA--------AATAGGCCAAATTGTAACTGCCATACCCGCCACCATTCAAACCGGCGACAGCCCG
droYak3 3L:3130014-3130301 - GGCGGCGGCCAATGGAATCTTTGCTGCTCTCGAGCAGCGTGAGGGACTGGGTAAGTTCTTGT--C-A----TT------CAA-------TCCTAGTTAATGT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCGACTAACTGACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTGTGTAT------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCATAA--CCAAA-C----------AAACAACACCA-----TACCAT-------------GC-CATA--------AATAGGCCAAATTGTAACCGCCATACCCGCCACCATTCAAACCGGCGACAGTCCG
droEug1 scf7180000408176:346893-346918 + CG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACACAGAAAACAGCGACAGCA--
droBia1 scf7180000300910:2426843-2427121 - GGCGGCGGCCAACGGCATCTTTGCCGCCCTGGAGCAGCGCGAAGGTCTGGGTAAGTTCTGGA--T-CCC--CA------AAT-------CCCTAAC----CA----------------------------AAACAAGCTGCTTATGACT--------CGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-A------------AAAACACCA-----T-TCAT-------------GC-CACA--------AACAGGGCAAATTGTAACCGCCATACCCGCCACCATCCAAGTGGGCGACAGTCCG
droTak1 scf7180000415356:438406-438694 - GGCGGCGGCCAACGGGATCTTTGCCGCCTTGGAGCAGCGCGAGGGCCTGGGTAAGTTCCTAA--A---------ACCAAAAAAA---AAACGTAATTAATTT----------------------------ACACAAGCTGCTTACGACT--------TGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-A----------CAAAAATACCA-----T-TCAT-------------GC-CGTA--------AATAGGCCAAATTGTAACCGCCATACCCGCCACCATCCAAGCCGGCGACAGTCCG
droEle1 scf7180000490564:4394-4695 + GGCGGCGGCCAATGGCATATTTGCTGCTCTAGAGCAGCGCGAAGGTCTGGGTAAGTTTCGAA--TT-G-----AATCAAAAG-------GAA----TAGTTT----------------------------ATACAAGCTGCTTTTGACT--------TGGGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----A-----------------CAAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAAAACCAAAACAAAACAAATC-AAAAACACCA-----T-CCAT-------------GC-CAAATA---TAAAAAAGGCCAAATAGTAACTGCCATACCCGCCACCATCCAAGTCGGCGACAGTCCG
droRho1 scf7180000766314:11890-12175 + GGCGGCGGCCAATGGGATATTTGCAGCTCTTGAACAGCGCGAGGGTCTGGGTAAGTTTCTCA--TAATAC-AA------AAA-------TACTA----GATT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----A------------------AAACGCTAAT-CATTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-A--------AC-AAAAACACCA-----T-CCAT-------------GC-CAAATA------AAAAGGCCAAATTGTAACCGCCATACCCGCCACCATCCAAGTCGGGGAAAGTCCG
droFic1 scf7180000452451:100702-100987 - GGCGGCAGCCAACGGCATTTTTGCCGCCTTAGAGCAGCGGGAAGGTCTTGGTAAGTTCTTCA--T-A----AA------ATA-------ACCCAAACAATTT----------------------------ACCCAAGCTGCTTTT-------------GAGCGATTAACTAACTT---GTGATTCTCTCTC--CCACC----A------------------AATCGCTAAT-CACTGT---------GTGTGT--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACCA--CCAAA-A-AAACAAAAC---AAAAACCA-----T-CCAT-------------GC-CAAA--------AACAGGCCAAATAGTAACCGCCATACCCGCCACCATTCAAACCGGCGACAGTCCG
droKik1 scf7180000302474:177725-178014 - GGCGGCGGCCAATGGCATCTTTGCCGCTCTGGAGCAGCGCGAGGGTCTGGGTAAGTTCTAGG--C------TA------AGG-------ATA---------------------TGG----CTG---CTCCTCACCAGCTGCT--------------------AACTAACTAACGT---GTGATTCTCTCTC--CC--C----GAAA-AC-------A---AAAACGCTAAT-CACTGT---------GTG--T--------ATTGT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCATTA--CCACA-CA-----AAAT----ACCACCACACCAT-CCAT-------------GCTGATGCGCCATAAAAAAGGCCAAATCGTAACCGCTATTCCCGCAACCGTCCAAGGCGGCGATAGTCCG
droAna3 scaffold_13337:7862281-7862584 - GGCGGCGGCCAATGGCATCTTTGCCGCCTTAGAGCAGCGTGAGGGTTTGGGTGAGTTTAG--TGTC-TT-----------------------TAATTCGTTT--AA------------------------ATAATAGCTGCTTTGTACC--------TGAGCGACTGACTAACTA---GTGATTCTATCTCTCCTTCC---CGAAAAAC------AAATCAATACGCTTAT-CACTGC-CCATCT--GTGTGT--------GTTTT------TGTCCTGCTGT----------TCACCCGCTGATCA---TGTCTAACCACCA--CCACA-A-AA-----AC-GTAAACAC-A-----TACTAT-------------GC-CGA----------AAAGGCCAAATCGTAACCGCCATACCCGCTACCATCCAGGCCGGCGACAGCCCG
droBip1 scf7180000396541:16838-17123 - GGCGGCCGCCAATGGCATCTTCGCCGCCCTGGAGCAGCGTGAGGGTTTGGGTGAGTTCAG--TGTC-TT----------A-------------AATTAGTTT--AA------------------------ATACTAGCTGCTTTTTACC--------TAAGCGACTGACTAACTA---GTGATTCTATCTCTCCTTCC---CGAAA-A--AAAACCAAACAAAACGCTTTT-CACTGC-CCATCT--GTGTGT--------GTTTT------TGTCCTGCTGT----------TCACCCGCTGATCA---TGTCTAACCTCCA--CCACA-A-AA---------------------------------------------------------ATAAGGCCAAATCGTAACCGCCATACCCGCTACCATCCAAGCTGGCGACAGCCCG
dp5 XR_group8:8799033-8799316 - GGCAGCGGCCAATGGGATATTCGCCGCCCTGGAGCAGCGCGAGGGTTTGGGTGAGTACGG--TGCC-GC----------A-------------GGATAACGC--AA-------AGG----CTT---CTCTGTACAGGCTGCTT------------------------ACTAACTT---TTGATTCTCTCTA--TCCCCCAACAAAA-ACAAAAAACAAAAACAATGCTAAT-CCATGCTCCATTCATGTGTGT--------GTTTT------TGTCCCGCTGTTGCC------TCACCCGCTGATCCATATG-CTAACCG---------------------------------------------------------GC-CA-----------AAAGGCCAAATCGTAACAGCCATTCCTGCCACCATACAAAGCGGCGACAGTCCG
droPer2 scaffold_50:407142-407422 + GGCAGCGGCCAATGGGATATTTGCCGCCCTGGAGCAGCGCGAGGGTTTGGGTGAGTACGG--TGCC-GC----------A-------------GGATAACGC--AA-------AGG----CTT---CTCTGTACAGGCTGCTT------------------------ACTAACTT---TTGATTCTCTCTA--TCCCC-AACAAAA-ACAAAAAACAAAAACAATGCTAAT-CCATGCTCCATCCATGTG--T--------GTGTT------TGTCCCGCTGTTGCC------TCACCCGCTGATCCATATG-CTAACCG---------------------------------------------------------GC-CA-----------AAAGGCCAAATCGTAACAGCCATTCCTGCCACCATACAAAGCGGCGACAGTCCG
droWil2 scf2_1100000004511:8054629-8054939 - GGCGGCTGCCAATGGCATTTTTGCTGCCCTCGAGCAACGTGAGGGCTTGGGTAAGTTGAA--TGG-G----AAAACCAAAAGAAAACAATTGTAAATAA---------------------TTG---TTTTGCTC---CTGCTTTTATTTTGCCAATATGAGAAAAAAACTAACTCTACTTGATTCTCTCTC--CATCC----C--------------------ATGCTAATTCATTTT---------GTG--T--------AT--T------TGTCTT--CGT----------TCACCCGCTGATCA-TTTG-CTAACTGCCA--AAAAA-C-AAA-----CAAAAATCAAAA-----CCCAAT-------------TC-CAAAC-------AAAAGGCCAAATTGTTACCGCCATTCCTGCTACCATACAAAGCGGTTATAGTCCG
droVir3 scaffold_13049:6457774-6458058 + dvi_18663 GGCGGCCGCCAATGGCATCTTTGCGGCACGTGAGCTGCGCGAAAGCTATGGTAAGTTCTTGT-GC------CT------TGA-------ATGGAAATTGCTT---------------------------GCCGCCGGCTGCTTTCGACA--------AACGAAACTAACT--------ATGATTCTCTCTC--C-----------------------------ATGCTAAT-GTGTGT---------GTGTGTGTGTGTGTAT--G------TGTGTGCGTGTTGTCTCATTGTCACCCGCTGCTCA---TG-CTAACCCA-----------------ATAT----------------------GTCACCCACAATTGT-CATACG------CCAAGGCCAAATTGTAACCGCCATTCCTGCAACCATACAAAGCGGCGACAGCCCG
droMoj3 scaffold_6680:4772118-4772392 + GGCGGCAGCCAATGGCATCTTTGCGGCACGTGAGCTGCGCGAAAGCTATGGTAAGTGCTTGG--T-G----G----------------------GTTAGC-TCCACATGCGAATCGCTTAC-----TGCTGGCGCTGCTGCTTTAAA----------ACCGA----AACTAACT----ATGATTCTCTCTC--C-----------------------------ATGCTAAT-CGCTGT---------GTA--T--------ATCTA------TGTCTGTCTGC---CTCATTGTCACCCGCTAACCA---A---------------------------ATAT----------------------GTCACCCACAATTGT-CATATG------CCAAGGCCAAATCGTAACCGCCATTCCTGCAACCATACAAAGCGGCGACAGTCCG
droGri2 scaffold_9452:1270-1550 + GGCGGCTGCGAATCGCATCTTTGCTGCACGAGAGCTGCGTGAAAACTACGGTGAGTTGTTTT--T-G-C-TTT------CGG-------GAA---------------------TTG----CTTTTACTTTTTGCCGGCTGCTTTGAAC---------ACCGAAACTAACTAAC------TGATTCTCTCTC--C-----------------------------ATGCTAAA-CGCTGT---------GTGTGTGTTTCTTGAT--CTTGATCTTGATCTATGTTGTCTCATTGTCACCTGCTGATCA---TG-CTAACCC-----------------------------------------AATGTCACCCA--------------------TCAAGGCCAAATTGTAACCGCCATTCCTGCAACCATTCAAAGTGGCGACAGCCCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGCGGCGGCCAATGGAATCTTCGCTGCTCTCGAGCAGCGGGAGGGACTGGGTAAGTTCTTGA--T-C----TA------AGA-------TCCTAATTTGTTT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-C----------AAAAAACACCA-----TACCAT-------------GC-CAAA--------AACAGGCCAAATTGTAACCGCCATACCCGCCACCATTCAAACCGGCGACAGTCCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................GCTCTCGAGCAGCGGGAGGGACTG..............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
....................TCGCTGCTCTCGAGCAGCGGGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
GGCGGCGGCCAATGGAATCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CATACCCGCCACCATTCAAACCGGCGAC......2811.00101000000000000000
.........CAATGGAATCTTCGCTGCTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CAAATTGTAACCGCCATACCCGC.........................2311.00101000000000000000
...................TTCGCTGCTCTCGAGCAGCGGGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000000000
...................TTCGCTGCTCTCGAGCAGCGGGAGGGAC................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
droSec2
GGCGGCGGCCAATGGAATCTTCGCTGCTCTCGAGCAGCGGGAGGGACTGGGTAAGTTCTTGA--T-C----TA------AGA-------TCCTAATTTGTTT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------AATAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-C----------AAAAAACACCA-----TACCAT-------------GC-CAAA--------AACAGGCCAAATTGTAACCGCCATACCCGCCACCATTCAAACCGGCGACAGTCCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................GCTCTCGAGCAGCGGGAGGGACTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2713.0030210
.........................GCTCTCGAGCAGCGGGAGGGACTG..............................................................................................................................................................................................................................................................................................................................................................................................................2413.0032100
......GGCCAATGGAATCTTCGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0021100
......GGCCAATGGAATCTTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.......GCCAATGGAATCTTCGCTGCTCTCGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
...........ATGGAATCTTCGCTGCTCTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
............................CTCGAGCAGCGGGAGGGACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..........AATGGAATCTTCGCTGCTCTCGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
..............GAATCTTCGCTGCTCTCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...........................TCTCGAGCAGCGGGAGGGACTG..............................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
......GGCCAATGGAATCTTCGCTGCTCTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
dm3
GGCGGCGGCCAATGGAATCTTTGCTGCTCTCGAGCAGCGGGAGGGACTGGGTAAGTTCTTGA--T-C----TA------AGA-------TCCTAATTTGTTT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-C----------AAAAAACACCA-----TACCAT-------------GC-CAAA--------AATAGGCCAGATTGTAACCGCCATACCCGCTACCATTCAAACCGGCGATAGTCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCCATACCCGCTACCATTCA................2317.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GGCGGCGGCCAATGGAATCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................CC----G------------------AAACGCTAAT-CACTGT---------GTG--...................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACCGCCATACCCGCTACC.....................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GGAATCTTTGCTGCTCTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCCAGATTGTAACCGCCAT...............................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTCGAGCAGCGGGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGCTCTCGAGCAGCGGGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTTTGCTGCTCTCGAGCAGCGGGAGGG..................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................GCTCTCGAGCAGCGGGAGGGACTG..............................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........CAATGGAATCTTTGCTGCTCTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGATTGTAACCGCC.................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AATGGAATCTTTGCTGCTCTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................A-C----------AAAAAACACCA-----TACCAT-------------GC-...................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCTCTCGAGCAGCGGGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGCGGCCAATGGAATCTTTGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATGGAATCTTTGCTGCTCTCGAGCAGCGGGAGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................3512.0020000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGTAACCGCCATACCCGCTACCATC..................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CCAGATTGTAACCGCCATACCCGCT........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATGGAATCTTTGCTGCTCTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GATTGTAACCGCCATACC............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCTCGAGCAGCGGGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCTCTCGAGCAGCGGGAGGGACTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGCTCTCGAGCAGCGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCCATACCCGCTACCA....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGCTCTCGAGCAGCGGGAGGGAC................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................TGCTCTCGAGCAGCGGGAGGG..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGCAGCGGGAGGGACTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................GTAAGTTCTTGA--T-C----TA------AGA-------TCCTAAT...............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAACCGCCATACCCGCT........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTTTGCTGCTCTCGAGCAGCGGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
........................TGCTCTCGAGCAGCGGGAGGGACTATC............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TACCATTCAAACCGGCGAT......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGATTGTAACCGCCATC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCATACCCGCTACCATTCA................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCTCTCGAGCAGCGGGAGGGACTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GATTGTAACCGCCATACCCATC........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCTCTCGAGCAGCGGGAGGGACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAACCGCCATACCCGCTACC.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCATACCCGCTACCATTCAAA..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACCGCCATACCCGCT........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACCGCCATACCCGCTACCATTCA................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCTGCTCTCGAGCAGCGGGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCGGCGGCCAATGGAATCTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CAATGGAATCTTTGCTGCTCTCGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................AT------TGTCCCGCTGT----------TCACCCGC..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCTCTCGAGCAGCGGGAGGGAC................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATACCCGCTACCATTCAAAC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCCATACCCGCTACCATTC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CAATGGAATCTTTGCTGCTCTCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AATGGAATCTTTGCTGCTCTC................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGCAGCGGGAGGGACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGCTCTCGAGCAGCGGGAGGGACTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGATTGTAACCGCCATAC.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CGCTGT----------TCACCCGCTGATCA---.........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AATGGAATCTTTGCTGCTCTCGAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTAACCGCCATACCCGC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CAGATTGTAACCGCCATACCC...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTTTGCTGCTCTCGAGCAGCGGGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCTCGAGCAGCGGGAGGGACTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................AGCGGGAGGGACTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droEre2
GGCGGCTGCCAATGGAATCTTCGCTGCTCTCGAGCAGCGCGAGGGACTGGGTAAGTACTCGG--T-G----TA------AAG-------TCATAGTTAATGT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCCAATAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-CA-----AAAC---AAACACCA-----TACCAT-------------GC-CGCA--------AATAGGCCAAATTGTAACTGCCATACCCGCCACCATTCAAACCGGCGACAGCCCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................GCTCTCGAGCAGCGCGAGGGACTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000300
.........CAATGGAATCTTCGCTGCTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021000010
...GGCTGCCAATGGAATCTTCGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0021001000
..........AATGGAATCTTCGCTGCTCTCGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
......TGCCAATGGAATCTTCGCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
........................TGCTCTCGAGCAGCGCGAGGGACTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
..............................CGAGCAGCGCGAGGGACTG..............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..............................CGAGCAGCGCGAGGGACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...GGCTGCCAATGGAATCTTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..............................CGAGCAGCGCGAGGGACTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
............................CTCGAGCAGCGCGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..............................CGAGCAGCGCGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
..........AATGGAATCTTCGCTGCTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
........................TGCTCTCGAGCAGCGCGAGGGACTG..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..........AATGGAATCTTCGCTGCTCTCGAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
droYak3
GGCGGCGGCCAATGGAATCTTTGCTGCTCTCGAGCAGCGTGAGGGACTGGGTAAGTTCTTGT--C-A----TT------CAA-------TCCTAGTTAATGT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCGACTAACTGACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTGTGTAT------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCATAA--CCAAA-C----------AAACAACACCA-----TACCAT-------------GC-CATA--------AATAGGCCAAATTGTAACCGCCATACCCGCCACCATTCAAACCGGCGACAGTCCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......GGCCAATGGAATCTTTGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200000020000
.........................GCTCTCGAGCAGCGTGAGGGACTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2712.00200100010000
.........CAATGGAATCTTTGCTGCTCTCGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201100000000
GGCGGCGGCCAATGGAATCTTTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCCATACCCGCCACCG....................1911.00110000000000
.....................TGCTGCTCTCGAGCAGCGTGAGGGACT...............................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.........CAATGGAATCTTTGCTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
GGCGGCGGCCAATGGAATCTTTGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
...........ATGGAATCTTTGCTGCTCTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
........................TGCTCTCGAGCAGCGTGAGGGACTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.........CAATGGAATCTTTGCTGCTCTCGAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...........ATGGAATCTTTGCTGCTCTCGAGCAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.............................................................................................AGTTAATGT----------------------------ACACAAGCTGCTT................................................................................................................................................................................................................................................................................................................2211.00100100000000
............................CTCGAGCAGCGTGAGGGACTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.................................GCAGCGTGAGGGACTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
......................GCTGCTCTCGAGCAGCGTGAGGGACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
droEug1
CG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACACAGAAAACAGCGACAGCA--SizeHit CountTotal NormTotal
No Reads
droBia1
GGCGGCGGCCAACGGCATCTTTGCCGCCCTGGAGCAGCGCGAAGGTCTGGGTAAGTTCTGGA--T-CCC--CA------AAT-------CCCTAAC----CA----------------------------AAACAAGCTGCTTATGACT--------CGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-A------------AAAACACCA-----T-TCAT-------------GC-CACA--------AACAGGGCAAATTGTAACCGCCATACCCGCCACCATCCAAGTGGGCGACAGTCCGSizeHit CountTotal NormTotal
No Reads
droTak1
GGCGGCGGCCAACGGGATCTTTGCCGCCTTGGAGCAGCGCGAGGGCCTGGGTAAGTTCCTAA--A---------ACCAAAAAAA---AAACGTAATTAATTT----------------------------ACACAAGCTGCTTACGACT--------TGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----G------------------AAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-A----------CAAAAATACCA-----T-TCAT-------------GC-CGTA--------AATAGGCCAAATTGTAACCGCCATACCCGCCACCATCCAAGCCGGCGACAGTCCGSizeHit CountTotal NormTotal
No Reads
droEle1
GGCGGCGGCCAATGGCATATTTGCTGCTCTAGAGCAGCGCGAAGGTCTGGGTAAGTTTCGAA--TT-G-----AATCAAAAG-------GAA----TAGTTT----------------------------ATACAAGCTGCTTTTGACT--------TGGGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----A-----------------CAAACGCTAAT-CACTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAAAACCAAAACAAAACAAATC-AAAAACACCA-----T-CCAT-------------GC-CAAATA---TAAAAAAGGCCAAATAGTAACTGCCATACCCGCCACCATCCAAGTCGGCGACAGTCCGSizeHit CountTotal NormTotal
No Reads
droRho1
GGCGGCGGCCAATGGGATATTTGCAGCTCTTGAACAGCGCGAGGGTCTGGGTAAGTTTCTCA--TAATAC-AA------AAA-------TACTA----GATT----------------------------ACACAAGCTGCTTTTGACT--------TGAGCGACTAACTAACTT---GTGATTCTCTCTC--CCACC----A------------------AAACGCTAAT-CATTGT---------GTG--T--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACAA--CCAAA-A--------AC-AAAAACACCA-----T-CCAT-------------GC-CAAATA------AAAAGGCCAAATTGTAACCGCCATACCCGCCACCATCCAAGTCGGGGAAAGTCCGSizeHit CountTotal NormTotal
No Reads
droFic1
GGCGGCAGCCAACGGCATTTTTGCCGCCTTAGAGCAGCGGGAAGGTCTTGGTAAGTTCTTCA--T-A----AA------ATA-------ACCCAAACAATTT----------------------------ACCCAAGCTGCTTTT-------------GAGCGATTAACTAACTT---GTGATTCTCTCTC--CCACC----A------------------AATCGCTAAT-CACTGT---------GTGTGT--------ATTAT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCACCA--CCAAA-A-AAACAAAAC---AAAAACCA-----T-CCAT-------------GC-CAAA--------AACAGGCCAAATAGTAACCGCCATACCCGCCACCATTCAAACCGGCGACAGTCCGSizeHit CountTotal NormTotal
No Reads
droKik1
GGCGGCGGCCAATGGCATCTTTGCCGCTCTGGAGCAGCGCGAGGGTCTGGGTAAGTTCTAGG--C------TA------AGG-------ATA---------------------TGG----CTG---CTCCTCACCAGCTGCT--------------------AACTAACTAACGT---GTGATTCTCTCTC--CC--C----GAAA-AC-------A---AAAACGCTAAT-CACTGT---------GTG--T--------ATTGT------TGTCCCGCTGT----------TCACCCGCTGATCA---TG-CTAACCATTA--CCACA-CA-----AAAT----ACCACCACACCAT-CCAT-------------GCTGATGCGCCATAAAAAAGGCCAAATCGTAACCGCTATTCCCGCAACCGTCCAAGGCGGCGATAGTCCGSizeHit CountTotal NormTotal
No Reads
droAna3
GGCGGCGGCCAATGGCATCTTTGCCGCCTTAGAGCAGCGTGAGGGTTTGGGTGAGTTTAG--TGTC-TT-----------------------TAATTCGTTT--AA------------------------ATAATAGCTGCTTTGTACC--------TGAGCGACTGACTAACTA---GTGATTCTATCTCTCCTTCC---CGAAAAAC------AAATCAATACGCTTAT-CACTGC-CCATCT--GTGTGT--------GTTTT------TGTCCTGCTGT----------TCACCCGCTGATCA---TGTCTAACCACCA--CCACA-A-AA-----AC-GTAAACAC-A-----TACTAT-------------GC-CGA----------AAAGGCCAAATCGTAACCGCCATACCCGCTACCATCCAGGCCGGCGACAGCCCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................TAGAGCAGCGTGAGGGTTTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2412.002000011
..............................AGAGCAGCGTGAGGGTTTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
............................TTAGAGCAGCGTGAGGGTTTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................TACCCGCTACCATCCAGGCCGGCG........2411.001100000
....................TTGCCGCCTTAGAGCAGCGTGAGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATACCCGCTACCATCCAGGCCGGC.........2411.001100000
.....................TGCCGCCTTAGAGCAGCGTGAGGG..................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................................AGCAGCGTGAGGGTTTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................AGAGCAGCGTGAGGGTTTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............................TTAGAGCAGCGTGAGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TACCCGCTACCATCCAGGCC............2011.001100000
.........................GCCTTAGAGCAGCGTGAGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
........................CGCCTTAGAGCAGCGTGAGGGTT................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................CCGCCTTAGAGCAGCGTGAGGGTTTGG.............................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
........................CGCCTTAGAGCAGCGTGAGGGTTTG..............................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
......................GCCGCCTTAGAGCAGCGTGAGGGTTTG..............................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
......................GCCGCCTTAGAGCAGCGTGAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.........................GCCTTAGAGCAGCGTGAGGGTTTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
........................CGCCTTAGAGCAGCGTGAGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........ATGGCATCTTTGCCGCCTTAGAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
.........................GCCTTAGAGCAGCGTGAGGGTTTGG.............................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................TGCCGCCTTAGAGCAGCGTGAGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.................................GCAGCGTGAGGGTTTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2040.251100000
droBip1
GGCGGCCGCCAATGGCATCTTCGCCGCCCTGGAGCAGCGTGAGGGTTTGGGTGAGTTCAG--TGTC-TT----------A-------------AATTAGTTT--AA------------------------ATACTAGCTGCTTTTTACC--------TAAGCGACTGACTAACTA---GTGATTCTATCTCTCCTTCC---CGAAA-A--AAAACCAAACAAAACGCTTTT-CACTGC-CCATCT--GTGTGT--------GTTTT------TGTCCTGCTGT----------TCACCCGCTGATCA---TGTCTAACCTCCA--CCACA-A-AA---------------------------------------------------------ATAAGGCCAAATCGTAACCGCCATACCCGCTACCATCCAAGCTGGCGACAGCCCGSizeHit CountTotal NormTotal
No Reads
dp5
GGCAGCGGCCAATGGGATATTCGCCGCCCTGGAGCAGCGCGAGGGTTTGGGTGAGTACGG--TGCC-GC----------A-------------GGATAACGC--AA-------AGG----CTT---CTCTGTACAGGCTGCTT------------------------ACTAACTT---TTGATTCTCTCTA--TCCCCCAACAAAA-ACAAAAAACAAAAACAATGCTAAT-CCATGCTCCATTCATGTGTGT--------GTTTT------TGTCCCGCTGTTGCC------TCACCCGCTGATCCATATG-CTAACCG---------------------------------------------------------GC-CA-----------AAAGGCCAAATCGTAACAGCCATTCCTGCCACCATACAAAGCGGCGACAGTCCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........ATGGGATATTCGCCGCCCTGGAGCAGCGCG......................................................................................................................................................................................................................................................................................................................................................................................................................3012.0020000000020
...............................GAGCAGCGCGAGGGTTTG..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGTAACAGCCATTCCTGCCA.......................2411.0010100000000
...............................GAGCAGCGCGAGGGTTTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAAGCGGCGACAGTCC.2011.0010100000000
................................AGCAGCGCGAGGGTTTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CATACAAAGCGGCGACAGTCC.2111.0010100000000
..............................GGAGCAGCGCGAGGGTTTG..............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................GCCCTGGAGCAGCGCGAGGGTTTGGG............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...................................AGCGCGAGGGTTTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................1840.2510100000000
droPer2
GGCAGCGGCCAATGGGATATTTGCCGCCCTGGAGCAGCGCGAGGGTTTGGGTGAGTACGG--TGCC-GC----------A-------------GGATAACGC--AA-------AGG----CTT---CTCTGTACAGGCTGCTT------------------------ACTAACTT---TTGATTCTCTCTA--TCCCC-AACAAAA-ACAAAAAACAAAAACAATGCTAAT-CCATGCTCCATCCATGTG--T--------GTGTT------TGTCCCGCTGTTGCC------TCACCCGCTGATCCATATG-CTAACCG---------------------------------------------------------GC-CA-----------AAAGGCCAAATCGTAACAGCCATTCCTGCCACCATACAAAGCGGCGACAGTCCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................GCCCTGGAGCAGCGCGAGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................TGCCGCCCTGGAGCAGCGCGAGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
..................................................GTGAGTACGG--TGCC-GC----------A-------------GGATA.............................................................................................................................................................................................................................................................................................................................................................2211.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAAGCGGCGACAGTC..1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAAGCGGCGACAGTCC.1911.001010000
...........ATGGGATATTTGCCGCCCTGGAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
..................ATTTGCCGCCCTGGAGCAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................TTGCCGCCCTGGAGCAGCGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............................GGAGCAGCGCGAGGGTTTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droWil2
GGCGGCTGCCAATGGCATTTTTGCTGCCCTCGAGCAACGTGAGGGCTTGGGTAAGTTGAA--TGG-G----AAAACCAAAAGAAAACAATTGTAAATAA---------------------TTG---TTTTGCTC---CTGCTTTTATTTTGCCAATATGAGAAAAAAACTAACTCTACTTGATTCTCTCTC--CATCC----C--------------------ATGCTAATTCATTTT---------GTG--T--------AT--T------TGTCTT--CGT----------TCACCCGCTGATCA-TTTG-CTAACTGCCA--AAAAA-C-AAA-----CAAAAATCAAAA-----CCCAAT-------------TC-CAAAC-------AAAAGGCCAAATTGTTACCGCCATTCCTGCTACCATACAAAGCGGTTATAGTCCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................CGAGCAACGTGAGGGCTTG..............................................................................................................................................................................................................................................................................................................................................................................................................1913.00320100
................................AGCAACGTGAGGGCTTGGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2113.00300300
........................TGCCCTCGAGCAACGTGAGGGCTTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
..............................CGAGCAACGTGAGGGCTTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTACCGCCATTCCTGCTACC.....................2411.00100100
.............................TCGAGCAACGTGAGGGCT................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
....................................................................................................................................................................................GATTCTCTCTC--CATCC----C--------------------ATGC............................................................................................................................................................................................................................2111.00101000
....................................................................................................................................................................AAAACTAACTCTACTTGATTC......................................................................................................................................................................................................................................................................2111.00101000
................ATTTTTGCTGCCCTCGAGCAACGTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.............GGCATTTTTGCTGCCCTCGAGCAACG........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
droVir3
GGCGGCCGCCAATGGCATCTTTGCGGCACGTGAGCTGCGCGAAAGCTATGGTAAGTTCTTGT-GC------CT------TGA-------ATGGAAATTGCTT---------------------------GCCGCCGGCTGCTTTCGACA--------AACGAAACTAACT--------ATGATTCTCTCTC--C-----------------------------ATGCTAAT-GTGTGT---------GTGTGTGTGTGTGTAT--G------TGTGTGCGTGTTGTCTCATTGTCACCCGCTGCTCA---TG-CTAACCCA-----------------ATAT----------------------GTCACCCACAATTGT-CATACG------CCAAGGCCAAATTGTAACCGCCATTCCTGCAACCATACAAAGCGGCGACAGCCCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTAACCGCCATTCCTGCAACC.....................2412.002000000000000000000000200000000000000000000000000000000000000000
............................CGTGAGCTGCGCGAAAGCTATGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2512.002001000000000000000000010000000000000000000000000000000000000000
.................TCTTTGCGGCACGTGAGCTGCGCGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000000000000000000200000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATACAAAGCGGCGACA.....1912.002001000000000000001000000000000000000000000000000000000000000000
..........AATGGCATCTTTGCGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002001000000000000000000010000000000000000000000000000000000000000
............TGGCATCTTTGCGGCACGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CATACAAAGCGGCGACAGCCCG2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTAACCGCCATTCCTGCAACCA....................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................GCACGTGAGCTGCGCGAAAGCTAT..............................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
..................CTTTGCGGCACGTGAGCTGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.................TCTTTGCGGCACGTGAGCTGCGCGAA....................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCCAAATTGTAACCGCCATT..............................2011.001000000000000000000100000000000000000000000000000000000000000000
...................TTTGCGGCACGTGAGCTGCGCGAAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000010000000000000000000000000000000000000000
.....................TGCGGCACGTGAGCTGCGCGAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAACCGCCATTCCTGCA........................2011.001000000000000000000000010000000000000000000000000000000000000000
GGCGGCCGCCAATGGCATCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................GTGAGCTGCGCGAAAGCTATG.............................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACCGCCATTCCTGCA........................1911.001001000000000000000000000000000000000000000000000000000000000000
.................TCTTTGCGGCACGTGAGCTGCG........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
....................TTGCGGCACGTGAGCTGCGCGAAAGCTAT..............................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAACCGCCATTCCTGCAAC......................2211.001000000000000000000000010000000000000000000000000000000000000000
................ATCTTTGCGGCACGTGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAACCGCCATTCCTGCAACC.....................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AACCGCCATTCCTGCAACCA....................2011.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCCATTCCTGCAACCA....................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCATACAAAGCGGCGACAGC...2311.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGTAACCGCCATTCCTGCA........................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................GCACGTGAGCTGCGCGAAAGCTATGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACCGCCATTCCTGCAACCA....................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAAGCGGCGACAGCCC.2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGTAACCGCCATTCCTGCAACCAT...................2811.001001000000000000000000000000000000000000000000000000000000000000
....................TTGCGGCACGTGAGCTGCGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGTAACCGCCATTCCTGCAACCA....................2711.001001000000000000000000000000000000000000000000000000000000000000
.................TCTTTGCGGCACGTGAGCTGCGCGAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
........................GGCACGTGAGCTGCGCGAAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAACCGCCATTCCTGCAACCA....................2411.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TGTGTGTAT--G------TGTGTGCGTG.....................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................TGTGT---------GTGTGTGTGTGTGTAT--......................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
GGCGGCAGCCAATGGCATCTTTGCGGCACGTGAGCTGCGCGAAAGCTATGGTAAGTGCTTGG--T-G----G----------------------GTTAGC-TCCACATGCGAATCGCTTAC-----TGCTGGCGCTGCTGCTTTAAA----------ACCGA----AACTAACT----ATGATTCTCTCTC--C-----------------------------ATGCTAAT-CGCTGT---------GTA--T--------ATCTA------TGTCTGTCTGC---CTCATTGTCACCCGCTAACCA---A---------------------------ATAT----------------------GTCACCCACAATTGT-CATATG------CCAAGGCCAAATCGTAACCGCCATTCCTGCAACCATACAAAGCGGCGACAGTCCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................ATCTTTGCGGCACGTGAGCTGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCCAAATCGTAACCGCCATTCCTGC.........................2511.001000001
...................TTTGCGGCACGTGAGCTGCGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........AATGGCATCTTTGCGGCACGTGAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
................................................................................................................................................................................................................................................................................TGTCTGTCTGC---CTCATTGTCACCCGCTAA...............................................................................................................................................2911.001100000
.................TCTTTGCGGCACGTGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
.............GGCATCTTTGCGGCACGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..........AATGGCATCTTTGCGGCACGTGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................CGTAACCGCCATTCCTGCA........................1911.001100000
.....................TGCGGCACGTGAGCTGCGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................ATCTTTGCGGCACGTGAGCTGCGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
......................GCGGCACGTGAGCTGCGCG......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............GCATCTTTGCGGCACGTGAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................TCGTAACCGCCATTCCTGCAACCATACA................2811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACCATACAAAGCGGCGACA.....2311.001100000
................................AGCTGCGCGAAAGCTATGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTAACCGCCATTCCTGCAACCATA..................2711.001100000
..............................TGAGCTGCGCGAAAGCTATG.............................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..............................TGAGCTGCGCGAAAGCTATGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................CTTTGCGGCACGTGAGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..........AATGGCATCTTTGCGGCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................CGTAACCGCCATTCCTGCAACCATA..................2511.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCATTCCTGCAACCATAC.................2111.001100000
.....................................................................................................TCCACATGCGAATCGCTTAC-----TGCTGGC..........................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTAACCGCCATTCCTGC.........................2011.001100000
................ATCTTTGCGGCACGTGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................TGCGGCACGTGAGCTGCGCGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................ACGTGAGCTGCGCGAAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droGri2
GGCGGCTGCGAATCGCATCTTTGCTGCACGAGAGCTGCGTGAAAACTACGGTGAGTTGTTTT--T-G-C-TTT------CGG-------GAA---------------------TTG----CTTTTACTTTTTGCCGGCTGCTTTGAAC---------ACCGAAACTAACTAAC------TGATTCTCTCTC--C-----------------------------ATGCTAAA-CGCTGT---------GTGTGTGTTTCTTGAT--CTTGATCTTGATCTATGTTGTCTCATTGTCACCTGCTGATCA---TG-CTAACCC-----------------------------------------AATGTCACCCA--------------------TCAAGGCCAAATTGTAACCGCCATTCCTGCAACCATTCAAAGTGGCGACAGCCCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:30 AM