ID:

dsi_14769

 Coordinate:

3r:3497895-3498019 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.5 -10.4 -10.3

Flybase annnotation

exon [3r_3497843_3497957_-]; CDS [3r_3497843_3497957_-]

No Repeatable elements found

Sense Strand Reads

----------------------------------------------------------------------------------------------------------------#################################################################################################################
CGCGGTCGCACCGCAAGCAGTCCAGAAGTTTTGTACTTAAATTAGTCGCAGTGAGTTGCCGCAGAACATCGGTTTCAGCTTTTTCGCGCTCGGACATTTAATCTTGGGAAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACATGGTACCTTCTACGCCGGTCAGCTGGTAAACGGATGCGCGACCCTCAAATGTGACAGGTCCAAGGAGGTTCA
**********************************************************************...........((((((((.((..(((((..((....)).)))))..))....))))))))..******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 GSM343915
embryo
 SRR902009
testis
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
....................................................................................................................................................................................AAACGGATGCGCGACCCT........................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................................GGAAAAATGGTCGTTACGTGTGAGATC............................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0
......................................................................GGTTTCAGCTTTTTCGCGCTCGGAC.................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................AAAAATGGTCGTTACGTGTGAGATCAGC......................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................CAGCTGGTAAACGGATGC................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................CGCAGTGAGTTGCCGCAGAAC.............................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................................GATCAGCTTCGATAATAATAGAC......................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................TTTTCGCGCTCGGACATTTAATC.......................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................TTTCGCGCTCGGACATTTAATCTTGG...................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................GCAGTGAGTTGCCGCAGAACATCGG......................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................................AGCTGGTAAACGGATGCGCGACCCT........................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................AAATGGTCGTTACGTGTGA................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................AATGTGACAGGTCCAAGGAGGT... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................CGGTTTCAGCTTTTTCGCGCTCGGAC.................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
............GCAAGTAGTCCTGAAGGTTT................................................................................................................................................................................................. 20 3 7 0.29 2 0 0 0 0 2 0 0 0
.....................................................................................GGGTTCGGACATATAATCT......................................................................................................................... 19 3 10 0.10 1 0 0 0 0 0 1 0 0
.........................................................................................................................................................TGGTACCTTCTACTCGG....................................................... 17 2 14 0.07 1 0 0 0 0 0 0 1 0
........................................................................................................AGGGTAAAATGGTGGTTAC...................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1
....................................TCAAATTAGCCGCAGTGAC.......................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0

Anti-sense strand reads

GCGCCAGCGTGGCGTTCGTCAGGTCTTCAAAACATGAATTTAATCAGCGTCACTCAACGGCGTCTTGTAGCCAAAGTCGAAAAAGCGCGAGCCTGTAAATTAGAACCCTTTTTACCAGCAATGCACACTCTAGTCGAAGCTATTATTATCTGTACCATGGAAGATGCGGCCAGTCGACCATTTGCCTACGCGCTGGGAGTTTACACTGTCCAGGTTCCTCCAAGT
********************************************************************************************...........((((((((.((..(((((..((....)).)))))..))....))))))))..********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR1275487
Male larvae		 SRR553488
RT_0-2 hours eggs
............................................................................................................................ACACTCTAGTCGAAGCTA................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................ACACTATCCAGGCTCCTC..... 18 2 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................AGTTGAGGCCAGTCGTCCATT........................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0
..............................................................................................................................................TTATTATCTGCACCAT................................................................... 16 1 3 0.33 1 1 0 0 0 0 0 0 0
..........GGGGTTCGTCAGGTGTTC..................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................GCTGCCAGTCGACCTTTTCCCT...................................... 22 3 4 0.25 1 0 0 0 0 1 0 0 0
.........TGGCGTGCGTCATGTCTTCC.................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 1 0 0 0 0 0
.........CGGCGTTCGTCAGGTGTT...................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 1 0
..........GGGGTTCGTCAGGTGTTCG.................................................................................................................................................................................................... 19 3 20 0.15 3 0 0 0 3 0 0 0 0
............GGTTCGTCAGGTGTTC..................................................................................................................................................................................................... 16 2 20 0.15 3 0 0 0 0 0 2 0 1
.........................................................................................................................TGCCCACTCTAGTCGGA....................................................................................... 17 2 7 0.14 1 0 0 0 0 0 1 0 0
...........................................................................................................................................CCCTTATTATCTGCACCAT................................................................... 19 3 9 0.11 1 1 0 0 0 0 0 0 0
............................................................................................................................................CCTTATTATCTGCACCAT................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................AGATGCGGGCAGTGGA................................................ 16 2 20 0.05 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................TGGGAGATGCGGCCTG.................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................ATGAGCGAGCCTGGAAAT............................................................................................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:3497845-3498069 - dsi_14769 CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAGTGAGTTGCC--------------------GCAGAACATCGGTTTCAGCT----------TTTTCGCGCT---------------CGGACATTTA--ATCTTG--------GG------------AAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACATGGTACCTTCTACGCCGGTCAGCTGGTAAACGGATGCGCGACCCTCAAATGTGACAGGTCCAAGGAGGTTCA
droSec2 scaffold_6:3680368-3680592 - dse_1486 CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAGTGAGTGGCC--------------------GCAGAACATCGGTTTCAGCT----------TTTTCGCGCT---------------CGGACATTTA--ATATTG--------GG------------AAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACATGGTACCTTCTACGCCGGTCAGCTGGTAAACGGATGCGCGACCCTCAAATGTGACAGGTCCAAGGAGGTTCA
dm3 chr3R:3609011-3609235 - CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAGTGAGTTGCC--------------------CCATAACATCGGTTTTAGCT----------TTTTCGCGCT---------------CGGACATTTA--ATCTTG--------GG------------AAAAATGGTTGTTACGTGTGAGATCAGCTTCGATAATAATAAACATGGTACTTTCTACGCCGGTCAGCTGGTAAAAGGATGCGCGACCCTTAAATGTGACAGGTCCAAGGAGGTTCA
droEre2 scaffold_4770:3848529-3848749 - CGCGG--------------------TCGC------ACCGCA----------A--------------------------------GTCCAGAAG---TTTTG-TACTT-----AAA-CTAGTCGAAGTGAGTTGCC--------------------CCAGAACATCGGTTTTAGCT----------TTTTCGCGCG---------------CGGACATTTA--ATCTCT--------G-------------CAAAATGGTCGTTACGTGTGAGATCAGCTTTGATAATAACAGACATGGTACTTTCTACGCCGGTCAGCTAGTAAAGGGGTGCGCTACCCTCAAATGTGACAGGTCCAAGGAGGTTCA
droYak3 v2_chrUn_1649:1117-1340 - CACGG--------------------TCGC------ACTGCA----------A-----------------------------GCAGTCCAGCAG---TTTTG-TACTT-----AAG-TTAGTCGAAGTGAGTTGCC--------------------CCAGAACATCGGTCTTAGCT----------TTTTCGCGCT---------------CGGACATTTA--ATCTGG---------G------------TAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACATGGTACTTTCTACGCCGGTCAGCTGGTAAACGGATGCGCGACCCTCAAATGTGACAGGTCCAAGGAGGTTCA
droEug1 scf7180000409760:526576-526802 - CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAACTCGTTGTC--------------------TCAGACCATAGGTTTTAGCA---------ATTTTCACGCT---------------CGGACTATTA--ATCTGG--------GA-----------ACAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACACGGCACTTTCTACGCCGGTCAACGCGTAAGTGGATGTATAACCCTTAAATGCGACAGATCCAAGGAAGTTCA
droBia1 scf7180000302155:974650-974869 + CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGC----------C--------------------CCAAACCATCGGTTTTAGCA---------GTTTGCACGCT---------------CGGTCGTTTA--ATCTGG--------GA--------AAATAAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACTCGGTACTTTCTACGCGGGACAGCTTGTCAGCGGCTGTGTGACCCTCAAGTGCGACAGATCCAAGGATGTGCA
droTak1 scf7180000414448:2896-3111 - CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGC----------C--------------------CCAGACCATCGGTTTTAGCA---------GTTTGCCCGCT---------------CGGTCATTTA--ATCTGG--------GA------------AAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACATGGTACTTTCTACGCCGGTCAACTTGTCAATGGCTGCGTGACCCTCAAGTGCGACAGATCCAAGGAGGTTCA
droEle1 scf7180000491104:679252-679477 + CGCGG--------------------GTGCG-----ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TAAGTCGCAACTCGTAGCC--------------------CCAGACCGTTGGTGTTAGCA---------GATTGCACGCT---------------CGGACTTTTA--ATCTGG---------T------------TAAAATGGTCGTAACGTGTGAGATCAGCTTCGAAAATAATATAGACGGTACCTTCTACGCCGGTCAACTTGTCAACGGCTGCGCAACCCTCAAATGCGACAGGTCAAAGGAGGTTCA
droRho1 scf7180000772049:14727-14952 - CGCGG--------------------CTGCG-----ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAACTCGGTGCC--------------------CCAGACCAGTGGTATTAGTA---------GTTTTCACGCT---------------CGGACTTTTA--ATCTGG---------G------------AAAAATGGTTGTTACGTGTGAGATCAGCTTCGATAATAATGTCCACGGTACTTTCTACGCCGGTCAACTTGTCAACGGCTGCGCAACCCTCAAATGCGACAGATCAAAGGAGGTTCA
droFic1 scf7180000454063:37288-37516 + GGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTTAAGTTAAG-TTAGTCGCAACTCGTTGTC--------------------GCAGACCATCGGTTTTGGCA---------GTTAGGACGCT---------------CGGACTTTTA--ATCTGG----------------------CAAAATGGTAGTTACGTGTGAGATCAGCTTCGATAATAACGTACACGGTACTTTCTACGCCGGTCAACTCGTCAACGGCTGCGTGACCCTAAAATGCGACAAATCCAAGGATGTTCA
droKik1 scf7180000302706:365915-366134 - -------------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCGGCAG---TTTTG-TACTT-----AAG-TTAGTCGCAACTCGTTGCC---------------------CTGGCCATCGGTTTTAGCG---------GATT-CCTGCG---------------CGGACACTCG--AACTGG--------AG-----------TAAAAATGGTCGTTACGTGTGAGATCAGCTTTGATAATAATAGACATGGCACTTTCTACGCCGGTCAACTGGTCAACGGATGCGTGACCCTCAAGTGTGACAGATCCAAGGAGGTACA
droAna3 scaffold_13340:3348374-3348600 - CGCCG--------------------TCGG------GCCGCA----------A-----------------------------GCAGTCCAGTAG---TTTTG-TACTT-----AAA-TTAGTCGCAACTCGTTGCC---------------------CGGACCATCGGTTTTAGCG---------GATTGCTTTCC---------------CGGACTCTAATTATTTGC---------A-----------CAAAAATGGTCGTTACGTGTGAGATCAGCTTCGACAATAATAGACACGGCACTTTCTACGCCGGTCAGTTGGTCAGCGGCTGTGTAACCCTGAAATGCGACAGACCCAAGGAAATACA
droBip1 scf7180000396712:1006947-1007173 + CGCCG--------------------ACGG------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAACTCGTTGCC---------------------CGGGCCATCGGTTTTAGCG---------GATTGCTTTCC---------------CGGACCTTAATTATTTGC---------C-----------CAGAAATGGTCGTTACGTGTGAGATCAGCTTCGACAATAATAGACACGGCACTTTCTACGCCGGTCAATTGGTCAGCGGCTGTGTGACCCTCAAATGCGATAAACCCAAGGAAGTACA
dp5 2:27014752-27014994 - CGCGG--------------------TCGC------ACCACGACTAAGCACGACCAAGCA-CGACCAAGCACGACCACGAC-CCTGTCCAGAAG---C---G-CATTT-----AAT-TTAGTCGTTGCTC--------------------------CCAGACG-----------------AAGTAGCG--------T--------------------------------GGATCGCGGGAGACCTCAAGTCAAAAATGGTTGTTACGTGTGAGATCAGCTTCGATAATAATAGATTCGGCACTTTCTATGCCGGACAGCTGGTGGGTGGCTGTGCGACTCTCAAGTCCGACAAACCAAAGGAGGTTCA
droPer2 scaffold_6:2301546-2301778 - CGCGG--------------------TCGC------ACCACG----------ACCAAGCA-CGACCAAGCACGACCACGAC-CCTGTCCAGAAG---C---G-CATTT-----AAT-TTAGTCGTTGCTC--------------------------CCAGACG-----------------AAGTAGCG--------T--------------------------------GGATCGCGGGAGACCTCAAGTCAAAAATGGTTGTTACGTGTGAGATCAGCTTCGATAATAATAGATTCGGCACTTTCTATGCCGGACAGCTGGTGGGTGGCTGTGCGACTCTCAAGTCCGACAAACCAAAGGAGGTTCA
droWil2 scf2_1100000004902:7485793-7486080 - CGCGA--------------------CG--------ACCGCT----------CCGAAGTGTTGGCTAGCCACGACCCCAGCAGCAGACCCA--GACATTTCATTATTC-----AAAGTTAGTCGCAATCCATTTGCCCACTCCTAATGTG------GTAGAC-------TTTAGTTTCTTGCG--AATTTTTTTTGCGAAT----------CGGAAAGCGG--AC------ACCGAGAAAACGGTCACC-TTAAAATGGTTGTTACATGCGAGATCAGCTTTGATAATAATAGATATGGCACCTTCTATGCTGGGCAATTGGTGGAGGGCTGTGTCACTCTTAAATCGGATAAGCCCAAGGAAGTTGA
droVir3 scaffold_12855:6523675-6523965 - CTTGAACAACAAAAGAGTCCAGCAACA---ATCGCACCG------------ACCCATTC-GTACTCAGCAT---------------------G---GCACC-TACTT-----TAT-TTAGTCGCCGTTCGTTGGC-CAGCCCTAATGCGTTGCCCCCGGACT--------------CTTAAGCATTG--------CGGTTCGGGAATTTTAGGATCTTTA--ATATAG-TGCGGGGTTTACGGCCA---GCGAAATGGTTGTTACGTGTGAGTTCAGCTTCGATAATAACAGACATGGCACCTTCTACGCCGGGCAGCTTGTGAGCGGCTGCGTAACCCTTAAATCGGATAAAATCAAGGAGGTTCA
droMoj3 scaffold_6540:6885517-6885631 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGGTTGTTACGTGCGAAATTAGCTTCGATAATAATAAGCACGGCACCTTCTACGCGGGTCAGCTGGTCAGCGGTTGTGTGACCCTTAAATCCGATAAAATCAAGGAGGTCCA
droGri2 scaffold_14906:7593639-7593753 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGGTTGTTACGTGCGAGATCACTTTCGATAATAATCGGCAAGGCACTTTCTTTGCTGGGCAGTTAGTTAGCGGATGTATTATTCTAAAGTCGGATAAAATTAAGGAAGTGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAGTGAGTTGCC--------------------GCAGAACATCGGTTTCAGCT----------TTTTCGCGCT---------------CGGACATTTA--ATCTTG--------GG------------AAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACATGGTACCTTCTACGCCGGTCAGCTGGTAAACGGATGCGCGACCCTCAAATGTGACAGGTCCAAGGAGGTTCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................AAACGGATGCGCGACCCT...........................1812.00200200000000000000
............................................................................................................................................................................................................................................GG------------AAAAATGGTCGTTACGTGTGAGATC............................................................................................2712.00200200000000000000
.....................................................................................................................................................................GGTTTCAGCT----------TTTTCGCGCT---------------CGGAC........................................................................................................................................................2511.00100100000000000000
..........................................................................................................................................................................................................................................................AAAAATGGTCGTTACGTGTGAGATCAGC.........................................................................................2811.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................CAGCTGGTAAACGGATGC...................................1811.00101000000000000000
.........................................................................................................................CGCAGTGAGTTGCC--------------------GCAGAAC.............................................................................................................................................................................................................2111.00100010000000000000
...............................................................................................................................................................................................................................................................................GATCAGCTTCGATAATAATAGAC.........................................................................2311.00100100000000000000
.........................................................................................................................................................................................TTTTCGCGCT---------------CGGACATTTA--ATC..............................................................................................................................................2311.00100100000000000000
..........................................................................................................................................................................................TTTCGCGCT---------------CGGACATTTA--ATCTTG--------G..................................................................................................................................2611.00101000000000000000
..........................................................................................................................GCAGTGAGTTGCC--------------------GCAGAACATCGG........................................................................................................................................................................................................2511.00100000000000100000
...........................................................................................................................................................................................................................................................................................................................AGCTGGTAAACGGATGCGCGACCCT...........................2511.00101000000000000000
............................................................................................................................................................................................................................................................AAATGGTCGTTACGTGTGA................................................................................................1911.00100000000000100000
......................................................................................................................................................................................................................................................................................................................................................AATGTGACAGGTCCAAGGAGGT...2211.00101000000000000000
....................................................................................................................................................................CGGTTTCAGCT----------TTTTCGCGCT---------------CGGAC........................................................................................................................................................2611.00100100000000000000
droSec2
CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAGTGAGTGGCC--------------------GCAGAACATCGGTTTCAGCT----------TTTTCGCGCT---------------CGGACATTTA--ATATTG--------GG------------AAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACATGGTACCTTCTACGCCGGTCAGCTGGTAAACGGATGCGCGACCCTCAAATGTGACAGGTCCAAGGAGGTTCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................A--ATATTG--------GG------------AAAAATGGT............................................................................................................1812.0020020
...............................................................................................................................................................................................................................................................................GATCAGCTTCGATAATAAT.............................................................................1911.0010010
..............................................................................................................................................................................................................................ATATTG--------GG------------AAAAATGGTC...........................................................................................................1811.0010010
..........................................................................................................................................................................................................................................................AAAAATGGTCGTTACGTGTGA................................................................................................2111.0010010
..............................................................................................................................................................................................................................................................ATGGTCGTTACGTGTGAGATC............................................................................................2111.0010010
.............................................................................................................................................................................CT----------TTTTCGCGCT---------------CGGACAT......................................................................................................................................................1911.0010010
......................................................................................................................................................................GTTTCAGCT----------TTTTCGCGCT---------------C............................................................................................................................................................2011.0010010
.........................................................................................................................CGCAGTGAGTGGCC--------------------GCAGAACATC..........................................................................................................................................................................................................2411.0010010
................................................................................................................................................................................................................................................................................................................CTACGCCGGTCAGCTGGT.............................................1811.0010010
.............................................................................................................................................................................................................................................G------------AAAAATGGTCGTTACGTGTGA................................................................................................2211.0010010
...........................................................................................................................................................................................................................................................AAAATGGTCGTTACGTGTGA................................................................................................2011.0010100
......................................................................................................................AGTCGCAGTGAGTGGCC--------------------GCAGAACAT...........................................................................................................................................................................................................2611.0010010
......................................................................................................................AGTCGCAGTGAGTGGCC--------------------GCAGA...............................................................................................................................................................................................................2211.0011000
........................................................................................................................................................................TTCAGCT----------TTTTCGCGCT---------------CGGACATT.....................................................................................................................................................2511.0010010
........................................................................................................................................................................TTCAGCT----------TTTTCGCGCT---------------CGGACAT......................................................................................................................................................2411.0010010
dm3
CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAGTGAGTTGCC--------------------CCATAACATCGGTTTTAGCT----------TTTTCGCGCT---------------CGGACATTTA--ATCTTG--------GG------------AAAAATGGTTGTTACGTGTGAGATCAGCTTCGATAATAATAAACATGGTACTTTCTACGCCGGTCAGCTGGTAAAAGGATGCGCGACCCTTAAATGTGACAGGTCCAAGGAGGTTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................AGTCGCAGTGAGTTGCC--------------------CCATAA..............................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000
...........................................................................................................................................................................................................................A--ATCTTG--------GG------------AAAAATGGT............................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTG--------GG------------AAAAATGGTTGTTACGT....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AAAATGGTTGTTACGTGTGA................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AGTCGCAGTGAGTTGCC--------------------CCA.................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................CGGTTTTAGCT----------TTTTCGCGCT---------------CG...........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGCGCGACCCTTAAATGTGACA................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GACCCTTAAATGTGACAGGTCCAAG........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AATGGTTGTTACGTGTGAGA..............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................................................................................................................CATCGGTTTTAGCT----------TTTTCGC...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CAGCTGGTAAAAGGATGCGC.................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................ATCTTG--------GG------------AAAAATGGTTGT.........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................GGTACTTTCTACGCCGGTCA...................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AGTCGCAGTGAGTTGCC--------------------C...................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AAAAATGGTTGTTACGTGT..................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTCTACGCCGGTCAGCTGGTAAAAG........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATGTGACAGGTCCAAGGA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................CGGTTTTAGCT----------TTTTCGC...............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TTAAATGTGACAGGTCCA..........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GCC--------------------CCATAACATCGGTTT.....................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AGTCGCAGTGAGTTGCC--------------------CCAT................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................................................................................................CATTTA--ATCTTG--------GG------------AAAAATGGT............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GATCAGCTTCGATAATAATA............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATAATAAACATGGTACTTTC..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TAGTCGCAGTGAGTTGCC--------------------....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AGTCGCAGTGAGTTGCC--------------------CCATAACAT...........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................................................................................................................CC--------------------CCATAACATCGGTTTTAGCT----------T.....................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................................................................................................................................AGCT----------TTTTCGCGCT---------------CGGACAT......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................................................................................................................................................................................................................................................TGTTACGTGTGAGATCAGCTTCGAT...................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AGCT----------TTTTCGCGCT---------------CGGA.........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................ATAACATCGGTTTTAGCT----------......................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CTACGCCGGTCAGCTGGT.............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TACGTGTGAGATCAGCTTCG.....................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GTGTGAGATCAGCTTCGATAA.................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................ATGTGACAGGTCCAAGGAG.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................TACGCCGGTCAGCTGGTAAAAGGATG....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................GG------------AAAAATGGTTGTTACGTGTGA................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................TTG--------GG------------AAAAATGGTTGTTGTT.....................................................................................................21140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droEre2
CGCGG--------------------TCGC------ACCGCA----------A--------------------------------GTCCAGAAG---TTTTG-TACTT-----AAA-CTAGTCGAAGTGAGTTGCC--------------------CCAGAACATCGGTTTTAGCT----------TTTTCGCGCG---------------CGGACATTTA--ATCTCT--------G-------------CAAAATGGTCGTTACGTGTGAGATCAGCTTTGATAATAACAGACATGGTACTTTCTACGCCGGTCAGCTAGTAAAGGGGTGCGCTACCCTCAAATGTGACAGGTCCAAGGAGGTTCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................CAAATGTGACAGGTCCAAGGAGGT...2411.0010000010
...............................................................................................................................................................................................................................................................................................AACAGACATGGTACTTTCTACGCCGGT.....................................................2711.0010100000
...............................................................................................................................................................................................................................TCTCT--------G-------------CAAAATGGTCGTTACGTGTGA................................................................................................2711.0010000100
.........................................................................................................................................................................TTAGCT----------TTTTCGCGCG---------------CGGAC........................................................................................................................................................2111.0010000100
............................................................................................................................................................................................................................................................AAATGGTCGTTACGTGTGA................................................................................................1911.0010000010
............................................................................................................................AGTGAGTTGCC--------------------CCAGAACATCG.........................................................................................................................................................................................................2211.0010001000
.......................................................................................................................................................................................................................ATTTA--ATCTCT--------G-------------CAAAATGGTCGT.........................................................................................................2411.0010000100
droYak3
CACGG--------------------TCGC------ACTGCA----------A-----------------------------GCAGTCCAGCAG---TTTTG-TACTT-----AAG-TTAGTCGAAGTGAGTTGCC--------------------CCAGAACATCGGTCTTAGCT----------TTTTCGCGCT---------------CGGACATTTA--ATCTGG---------G------------TAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACATGGTACTTTCTACGCCGGTCAGCTGGTAAACGGATGCGCGACCCTCAAATGTGACAGGTCCAAGGAGGTTCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................CATTTA--ATCTGG---------G------------TAAAATGGT............................................................................................................2221.50300100020000
........................................................................................................................................................................CTTAGCT----------TTTTCGCGCT---------------CGGA.........................................................................................................................................................2121.00201000010000
.......................................................................................................................................................................................................................................................................................................................GGTCAGCTGGTAAACGGATGCGCGAC..............................2620.50100000010000
.............................................................................................................................................................................................................................................................AATGGTCGTTACGTGTGAG...............................................................................................1920.50100000010000
.................................................................................................................................................................CATCGGTCTTAGCT----------TTTTCGCGCT---------------CGGA.........................................................................................................................................................2820.50100100000000
............................................................................................................................................................................................................................................................................................................CTTTCTACGCCGGTCAGCTG...............................................2020.50110000000000
........................................................................................................................................................................CTTAGCT----------TTTTCGCGCT---------------CGG..........................................................................................................................................................2020.50100000010000
.........................................................................................................................................................................................................................................................................................................................................................GTGACAGGTCCAAGGAGGT...1920.50110000000000
.....................................................................................................................................................................................................................................................................................................................................................AAATGTGACAGGTCCAAGGA......2020.50101000000000
.............................................................................................................................................................................................................................................................................................................TTTCTACGCCGGTCAGCTG...............................................1920.50110000000000
............................................................................................................................AGTGAGTTGCC--------------------CCAGAACATCGGT.......................................................................................................................................................................................................2420.50101000000000
.................................................................................................................................................................................................................................................................GTCGTTACGTGTGAGATCAGCTTCGAT...................................................................................2720.50101000000000
.......................................................................................................................................................................................................................................................................................................................................................ATGTGACAGGTCCAAGGAGGTT..2220.50100000010000
..................................................................................................................................................................ATCGGTCTTAGCT----------TTTTCGC...............................................................................................................................................................................2020.50100100000000
...........................................................................................................................................................CCAGAACATCGGTCTTAGCT----------TTTTCGC...............................................................................................................................................................................2720.50101000000000
..................................................................................................................................................................................................................................................................................................................................AAACGGATGCGCGACCCTC..........................1920.50110000000000
........................................................................................................................................................................................................................................................................................CGATAATAATAGACATGGT....................................................................1920.50100010000000
.................................................................................................................................GTTGCC--------------------CCAGAACATCGGT.......................................................................................................................................................................................................1920.50101000000000
...........................................................................................................................................................................................................................................................AAAATGGTCGTTACGTGTGA................................................................................................2020.50100000010000
...........................................................................................................................................................................................................................................................AAAATGGTCGTTACGTGTGAG...............................................................................................2120.50100000010000
....................................................................................................................................................................................................................................................................GTTACGTGTGAGATCAGCTTCG.....................................................................................2220.50100000010000
..........................................................................................................................................................................................................................TA--ATCTGG---------G------------TAAAATGGC............................................................................................................1820.50100100000000
........................................................................................................................................................................CTTAGCT----------TTTTCGCGCT---------------CGGAC........................................................................................................................................................2220.50100010000000
............................................................................................................................................................................................................................................................................................................CTTTCTACGCCGGTCAGCTGGTAAAC.........................................2620.50100000010000
..............................................................................................................................TGAGTTGCC--------------------CCAGAACATCGGTCTTA...................................................................................................................................................................................................2620.50110000000000
.............................................................................................................................GTGAGTTGCC--------------------CCAGAACATC..........................................................................................................................................................................................................2020.50100100000000
...............................................................................................................................................................AACATCGGTCTTAGCT----------TTTTCGCGCT---------------CG...........................................................................................................................................................2820.50100000010000
................................................................................................................................................................................................................................................................................................ATAGACATGGTACTTTCTACGCC........................................................2320.50100100000000
..................................................................................................................................................................................................................................................................................................................................................CTCAAATGTGACAGGTCCAAG........2120.50100000010000
.....................................................................................................................................................................................................................................................................................................CATGGTACTTTCTACGCCGGTCAGCTGGT.............................................2920.50100000010000
.................................................................................................................................................................CATCGGTCTTAGCT----------TTTTCGCGCT---------------C............................................................................................................................................................2520.50100100000000
droEug1
CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAACTCGTTGTC--------------------TCAGACCATAGGTTTTAGCA---------ATTTTCACGCT---------------CGGACTATTA--ATCTGG--------GA-----------ACAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACACGGCACTTTCTACGCCGGTCAACGCGTAAGTGGATGTATAACCCTTAAATGCGACAGATCCAAGGAAGTTCASizeHit CountTotal NormTotal
No Reads
droBia1
CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGC----------C--------------------CCAAACCATCGGTTTTAGCA---------GTTTGCACGCT---------------CGGTCGTTTA--ATCTGG--------GA--------AAATAAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACTCGGTACTTTCTACGCGGGACAGCTTGTCAGCGGCTGTGTGACCCTCAAGTGCGACAGATCCAAGGATGTGCASizeHit CountTotal NormTotal
No Reads
droTak1
CGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGC----------C--------------------CCAGACCATCGGTTTTAGCA---------GTTTGCCCGCT---------------CGGTCATTTA--ATCTGG--------GA------------AAAAATGGTCGTTACGTGTGAGATCAGCTTCGATAATAATAGACATGGTACTTTCTACGCCGGTCAACTTGTCAATGGCTGCGTGACCCTCAAGTGCGACAGATCCAAGGAGGTTCASizeHit CountTotal NormTotal
No Reads
droEle1
CGCGG--------------------GTGCG-----ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TAAGTCGCAACTCGTAGCC--------------------CCAGACCGTTGGTGTTAGCA---------GATTGCACGCT---------------CGGACTTTTA--ATCTGG---------T------------TAAAATGGTCGTAACGTGTGAGATCAGCTTCGAAAATAATATAGACGGTACCTTCTACGCCGGTCAACTTGTCAACGGCTGCGCAACCCTCAAATGCGACAGGTCAAAGGAGGTTCASizeHit CountTotal NormTotal
No Reads
droRho1
CGCGG--------------------CTGCG-----ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAACTCGGTGCC--------------------CCAGACCAGTGGTATTAGTA---------GTTTTCACGCT---------------CGGACTTTTA--ATCTGG---------G------------AAAAATGGTTGTTACGTGTGAGATCAGCTTCGATAATAATGTCCACGGTACTTTCTACGCCGGTCAACTTGTCAACGGCTGCGCAACCCTCAAATGCGACAGATCAAAGGAGGTTCASizeHit CountTotal NormTotal
No Reads
droFic1
GGCGG--------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTTAAGTTAAG-TTAGTCGCAACTCGTTGTC--------------------GCAGACCATCGGTTTTGGCA---------GTTAGGACGCT---------------CGGACTTTTA--ATCTGG----------------------CAAAATGGTAGTTACGTGTGAGATCAGCTTCGATAATAACGTACACGGTACTTTCTACGCCGGTCAACTCGTCAACGGCTGCGTGACCCTAAAATGCGACAAATCCAAGGATGTTCASizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------TCGC------ACCGCA----------A-----------------------------GCAGTCCGGCAG---TTTTG-TACTT-----AAG-TTAGTCGCAACTCGTTGCC---------------------CTGGCCATCGGTTTTAGCG---------GATT-CCTGCG---------------CGGACACTCG--AACTGG--------AG-----------TAAAAATGGTCGTTACGTGTGAGATCAGCTTTGATAATAATAGACATGGCACTTTCTACGCCGGTCAACTGGTCAACGGATGCGTGACCCTCAAGTGTGACAGATCCAAGGAGGTACASizeHit CountTotal NormTotal
No Reads
droAna3
CGCCG--------------------TCGG------GCCGCA----------A-----------------------------GCAGTCCAGTAG---TTTTG-TACTT-----AAA-TTAGTCGCAACTCGTTGCC---------------------CGGACCATCGGTTTTAGCG---------GATTGCTTTCC---------------CGGACTCTAATTATTTGC---------A-----------CAAAAATGGTCGTTACGTGTGAGATCAGCTTCGACAATAATAGACACGGCACTTTCTACGCCGGTCAGTTGGTCAGCGGCTGTGTAACCCTGAAATGCGACAGACCCAAGGAAATACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................CAATAATAGACACGGCACTTTCTACGCC........................................................2813.003030000
......................................................................................................................AGTCGCAACTCGTTGCC---------------------CGGACC.............................................................................................................................................................................................................2312.002200000
.......................................................................................................................................................................................................................................................................ACGTGTGAGATCAGCTTCGAC...................................................................................2111.001001000
.................................................................................................................................................................................................CC---------------CGGACTCTAATTATTTGC---------..................................................................................................................................2011.001010000
...........................................................................................................................................................................................................................................................................................................ACTTTCTACGCCGGTCAGTTGGTCAGC.........................................2711.001010000
...............................................................................................................................................................................................................................................................................................AATAGACACGGCACTTTCTACGCC........................................................2411.001010000
............................................................................................................................................................................................................................................................................................................................GTTGGTCAGCGGCTGTGTAACCCT...........................2411.001000010
.............................................................................................................................................................GGACCATCGGTTTTAGCG---------GATTGC.................................................................................................................................................................................2411.001000010
..............................................................................................................................................................................................................................ATTTGC---------A-----------CAAAAATGGTCGTT........................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................................................GGTCAGCGGCTGTGTAACCCTGAAATG.....................2711.001100000
................................................................................................................AAA-TTAGTCGCAACTCGTTGCC---------------------C..................................................................................................................................................................................................................2311.001010000
...........................................................................................................................................................................................................................ATTATTTGC---------A-----------CAAAAATGGTCGT.........................................................................................................2311.001010000
..................................................................................................................................................................ATCGGTTTTAGCG---------GATTGCTTTCC---------------C............................................................................................................................................................2511.001010000
droBip1
CGCCG--------------------ACGG------ACCGCA----------A-----------------------------GCAGTCCAGAAG---TTTTG-TACTT-----AAA-TTAGTCGCAACTCGTTGCC---------------------CGGGCCATCGGTTTTAGCG---------GATTGCTTTCC---------------CGGACCTTAATTATTTGC---------C-----------CAGAAATGGTCGTTACGTGTGAGATCAGCTTCGACAATAATAGACACGGCACTTTCTACGCCGGTCAATTGGTCAGCGGCTGTGTGACCCTCAAATGCGATAAACCCAAGGAAGTACASizeHit CountTotal NormTotal
No Reads
dp5
CGCGG--------------------TCGC------ACCACGACTAAGCACGACCAAGCA-CGACCAAGCACGACCACGAC-CCTGTCCAGAAG---C---G-CATTT-----AAT-TTAGTCGTTGCTC--------------------------CCAGACG-----------------AAGTAGCG--------T--------------------------------GGATCGCGGGAGACCTCAAGTCAAAAATGGTTGTTACGTGTGAGATCAGCTTCGATAATAATAGATTCGGCACTTTCTATGCCGGACAGCTGGTGGGTGGCTGTGCGACTCTCAAGTCCGACAAACCAAAGGAGGTTCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................GGTGGCTGTGCGACTCTCAAGTCCGAC.................2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................GTGCGACTCTCAAGTCCGA..................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................GCGACTCTCAAGTCCGACAAACCAAA.........2611.0010010000000
.....................................................................................................................................................................................GTAGCG--------T--------------------------------GGATCGCGGGAGAC.............................................................................................................................2111.0010010000000
.........................................................................................................................................................................................................................................................................................GATAATAATAGATTCGGCA...................................................................1911.0010100000000
............................................................................................................................................................CAGACG-----------------AAGTAGCG--------T--------------------------------GGATCGC....................................................................................................................................2211.0010000100000
......................................................................................................................................................................................................................................................................................................................................GGCTGTGCGACTCTCAAGTCCGAC.................2411.0010010000000
.....................................................................................................................................................................................GTAGCG--------T--------------------------------GGATCGCGGGAGA..............................................................................................................................2011.0010000100000
...................................................................................................................................................................................................................................................................................................GATTCGGCACTTTCTATG..........................................................1811.0011000000000
................................................................................................................................C--------------------------CCAGACG-----------------AAGTAGCG--------T--------------------------------GGATCGCG...................................................................................................................................2511.0010000100000
droPer2
CGCGG--------------------TCGC------ACCACG----------ACCAAGCA-CGACCAAGCACGACCACGAC-CCTGTCCAGAAG---C---G-CATTT-----AAT-TTAGTCGTTGCTC--------------------------CCAGACG-----------------AAGTAGCG--------T--------------------------------GGATCGCGGGAGACCTCAAGTCAAAAATGGTTGTTACGTGTGAGATCAGCTTCGATAATAATAGATTCGGCACTTTCTATGCCGGACAGCTGGTGGGTGGCTGTGCGACTCTCAAGTCCGACAAACCAAAGGAGGTTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................ATAATAGATTCGGCACTTTCTATGCC........................................................2612.002200000
....................................................................................................................................................................................................................................................................GTTACGTGTGAGATCAGCTTC......................................................................................2111.001010000
....................................................................................................................................................................................................................................................................GTTACGTGTGAGATCAGCTTCGAT...................................................................................2411.001001000
....................................................................................................................................................................................................................................................................................................................GCCGGACAGCTGGTGGGTGT.......................................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................TGGCTGTGCGACTCTCAAGG......................2011.001100000
.....................................................................................................................................................................................GTAGCG--------T--------------------------------GGATCGCGGGA................................................................................................................................1811.001100000
.............................................................................................................................GCTC--------------------------CCAGACG-----------------AAGTAGCG--------T--------------------------------GGATCGC....................................................................................................................................2711.001000001
................................................................................................................................................................................................................................................................GGTTGTTACGTGTGAGATCA...........................................................................................2011.001000001
............................................................................................................................................................................................................................................................AAATGGTTGTTACGTGTGAGATCAGC.........................................................................................2611.001100000
...................................................................................................................................................................................AAGTAGCG--------T--------------------------------GGATCGCGGG.................................................................................................................................1911.001001000
droWil2
CGCGA--------------------CG--------ACCGCT----------CCGAAGTGTTGGCTAGCCACGACCCCAGCAGCAGACCCA--GACATTTCATTATTC-----AAAGTTAGTCGCAATCCATTTGCCCACTCCTAATGTG------GTAGAC-------TTTAGTTTCTTGCG--AATTTTTTTTGCGAAT----------CGGAAAGCGG--AC------ACCGAGAAAACGGTCACC-TTAAAATGGTTGTTACATGCGAGATCAGCTTTGATAATAATAGATATGGCACCTTCTATGCTGGGCAATTGGTGGAGGGCTGTGTCACTCTTAAATCGGATAAGCCCAAGGAAGTTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................GTTGTTACATGCGAGATCAGCT........................................................................................2211.00100100
................................................................................................................................................ATGTG------GTAGAC-------TTTAGTTT...............................................................................................................................................................................................1911.00100010
..................................................................................................................................................................................................................................................................................................................ATGCTGGGCAATTGGTGGA..........................................1911.00100010
................................................................................................................................................................................................................................................................................................................CTATGCTGGGCAATTGGTGGA..........................................2111.00100100
........................................................................................................................................................................................................................GCGG--AC------ACCGAGAAAACGGT...........................................................................................................................2011.00100100
..................................................................................................................................................................................................................................................................................................................ATGCTGGGCAATTGGTGGAGG........................................2111.00100010
.....................................................................................................................................................................................G--AATTTTTTTTGCGAAT----------CGGAAAGCG....................................................................................................................................................2611.00100100
.....................................................................................................................................................................................................................AAAGCGG--AC------ACCGAGAAAACGGT...........................................................................................................................2311.00100010
...........................................................................................................................................................................................TTTTTTTGCGAAT----------CGGAAAGCGG--AC------ACC......................................................................................................................................2811.00110000
.................................................................................................................................................TGTG------GTAGAC-------TTTAGTTT...............................................................................................................................................................................................1811.00100010
............................................................................................................................................................................................................................................................................................................................ATTGGTGGAGGGCTGTGT.................................1811.00100100
...........................................................................................................................................................................................................................................................................................................................AATTGGTGGAGGGCTGTGTCAC..............................2211.00100010
................................................................................................................................................................................................................................................................GGTTGTTACATGCGAGATCA...........................................................................................2011.00100010
..........................................................................................................................................................................................................................................................................................................................CAATTGGTGGAGGGCTGTGTCA...............................2211.00100100
.............................................................................................................................................................................................................................................AAACGGTCACC-TTAAAATGGTTGT.........................................................................................................2411.00100010
..................................................................................................................................................................................................................................................................................................................ATGCTGGGCAATTGGTGGAG.........................................2011.00101000
................................................................................................................................................................................................................................................................................................................CTATGCTGGGCAATTGGTGGAG.........................................2211.00100100
...................................................................................................................................................................................................................................................................................................................................................TTAAATCGGATAAGCCCAAGGAA.....2311.00100010
...........................................................................................................................................................................................................................................................................................................................AATTGGTGGAGGGCTGTGTCACT.............................2311.00100010
....................................................................................................................................................................................................................................................................GTTACATGCGAGATCAGCTTT......................................................................................2111.00101000
droVir3
CTTGAACAACAAAAGAGTCCAGCAACA---ATCGCACCG------------ACCCATTC-GTACTCAGCAT---------------------G---GCACC-TACTT-----TAT-TTAGTCGCCGTTCGTTGGC-CAGCCCTAATGCGTTGCCCCCGGACT--------------CTTAAGCATTG--------CGGTTCGGGAATTTTAGGATCTTTA--ATATAG-TGCGGGGTTTACGGCCA---GCGAAATGGTTGTTACGTGTGAGTTCAGCTTCGATAATAACAGACATGGCACCTTCTACGCCGGGCAGCTTGTGAGCGGCTGCGTAACCCTTAAATCGGATAAAATCAAGGAGGTTCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................AATGGTTGTTACGTGTGAGTTCAGC.........................................................................................2512.002000000000000000000000000000000000000000000000000000000000001010
....................................................................................................................................................................................................................................................................GTTACGTGTGAGTTCAGCTTCGATAATA...............................................................................2812.002000000000000000000000010000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................TACGTGTGAGTTCAGCTTCG.....................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AAATGGTTGTTACGTGTGA................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GTAACCCTTAAATCGGATAAA..............2111.001000000000000000000010000000000000000000000000000000000000000000
...............................................................................................................................................................ACT--------------CTTAAGCATTG--------CGGTTCGG....................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................CTAATGCGTTGCCCCCGGACT--------------CTTAAGC........................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TGTTACGTGTGAGTTCAGC.........................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................CTAATGCGTTGCCCCCGGACT--------------C..............................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AATGGTTGTTACGTGTGA................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................A--ATATAG-TGCGGGGTTTACGGC...........................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................GTGAGTTCAGCTTCGATAATAAC.............................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................CTAATGCGTTGCCCCCGGA...............................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................ATTC-GTACTCAGCAT---------------------G---GCACC-.........................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GGTTTACGGCCA---GCGAAATGGTT...........................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CCTTCTACGCCGGGCAGCTTGTGAGC.........................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GACATGGCACCTTCTACGCCGGGC....................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GGC-CAGCCCTAATGCGTTGCCCC...................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GTTCGTTGGC-CAGCCCTAATGCGTTG.......................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................GATCTTTA--ATATAG-TGCGGG....................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................ATAG-TGCGGGGTTTACGGCC..........................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................CGATAATAACAGACATGGCAC..................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
droMoj3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGGTTGTTACGTGCGAAATTAGCTTCGATAATAATAAGCACGGCACCTTCTACGCGGGTCAGCTGGTCAGCGGTTGTGTGACCCTTAAATCCGATAAAATCAAGGAGGTCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................GGTTGTTACGTGCGAAATTAGCTTCG.....................................................................................2611.001000001
..............................................................................................................................................................................................................................................................ATGGTTGTTACGTGCGAAAT.............................................................................................2011.001100000
............................................................................................................................................................................................................................................................................................AATAATAAGCACGGCACCTTCTACGCG........................................................2711.001100000
................................................................................................................................................................................................................................................................................................................................GTCAGCGGTTGTGTGACCCTTAAATCC....................2711.001000001
.................................................................................................................................................................................................................................................................GTTGTTACGTGCGAAATTAGCTTCGATA..................................................................................2811.001000001
.....................................................................................................................................................................................................................................................................................................CACGGCACCTTCTACGCGGGTCAGCT................................................2611.001100000
.........................................................................................................................................................................................................................................................................................................................................................CCGATAAAATCAAGGAGGT...1911.001000001
................................................................................................................................................................................................................................................................................................................................GTCAGCGGTTGTGTGACCCT...........................2011.001100000
.............................................................................................................................................................................................................................................................................................ATAATAAGCACGGCACCTTCTACGCGG.......................................................2711.001100000
.............................................................................................................................................................................................................................................................AATGGTTGTTACGTGCGAAATTAGC.........................................................................................2511.001100000
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGGTTGTTACGTGCGAGATCACTTTCGATAATAATCGGCAAGGCACTTTCTTTGCTGGGCAGTTAGTTAGCGGATGTATTATTCTAAAGTCGGATAAAATTAAGGAAGTGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:36 AM