ID:

dsi_1467

 Coordinate:

2r:4453094-4453243 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.8 -7.7 -7.7 -7.6

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

TACGAGAATGTCATTTCCGAGGGAGTCGAGGGCATTGAGCACCAGGAAAGGTAAGCTATTCCAGTTACTACTTGATATTAGATACAATTTAAGATAGATCGTTTTATTGTTAATTTACACGATTTAAACGTCGAGATTAGCTGAATAATAGGTCTTTACACAGCATACACCCCATAATATATTATATTATTTTTTGGCAATTATCGCTTTTAGATGTTAGCATAGAAAATTCTGATTAGTCATCTTCCCA
***************************************************************************.((..........((((....((.(((((.(((((........)))))..)))))))....))))....))******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 O001
Testis
 O002
Head
 GSM343915
embryo
 M024
male body		 M023
head
 SRR553486
Makindu_3 day-old ovaries
.....................................................................................................................CACGGTTTAAACTTCGA.................................................................................................................... 17 2 12 3.17 38 38 0 0 0 0 0 0 0
............................................GGAAAGGTAAGCTATTCCA........................................................................................................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0 0 0
...........................................................................TATTAGATACAATTTAAG............................................................................................................................................................. 18 0 1 2.00 2 0 0 0 2 0 0 0 0
.........................................................................................................................ATTTAAACGTCGAGATTAGCTGAAT........................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................AGAAAATTCTGATTAGTCATCTTCCC. 26 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................TTACACGGTTTAAACTTCGA.................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................TCTTTACACAGCATACACCCC............................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................CATAGAAAATTCTGATTAGTCA........ 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................AGATAGATCGAATTATTGTT........................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 1 0
...................................................................................................................TGCACGGTTTAAACGTCGA.................................................................................................................... 19 2 2 0.50 1 0 0 0 0 1 0 0 0
......AATGTAACTTCCGAGGGA.................................................................................................................................................................................................................................. 18 2 2 0.50 1 0 0 0 0 0 0 0 1
...................................................................................................................TATACGATTTAAACTTCGA.................................................................................................................... 19 2 3 0.33 1 0 0 0 0 1 0 0 0
...........................................................................................AGATAGATCGAATTATTGT............................................................................................................................................ 19 2 3 0.33 1 0 0 0 0 0 1 0 0
........................................................................................................................GATTTAAACGTCGCGACT................................................................................................................ 18 2 4 0.25 1 0 0 0 0 0 0 1 0
...................................................................................................................CGCACGGTTTAAACGTCGA.................................................................................................................... 19 3 9 0.22 2 0 0 0 0 2 0 0 0
......................................................................................................................ACGATTTAAACTTCGA.................................................................................................................... 16 1 5 0.20 1 1 0 0 0 0 0 0 0
..................................................................................................................CTACACGGTTTAAACTTCGA.................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0
....................................................................................................................ACACGGTTTAAACTTCGA.................................................................................................................... 18 2 7 0.14 1 0 0 0 0 1 0 0 0
...........................................................................................AGATAGATCGGTTAATTGGT........................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 1 0 0 0
...................................................................................................................TACACGACTTAATCTTCGA.................................................................................................................... 19 3 10 0.10 1 0 0 0 0 1 0 0 0
...................................................................................................................CACACGGTTTAAACGTCGT.................................................................................................................... 19 3 11 0.09 1 0 0 0 0 1 0 0 0
...................................................................................................................TCCACGGTTTAAACTTCGA.................................................................................................................... 19 3 14 0.07 1 1 0 0 0 0 0 0 0
...................................................................................................................TGCACGGTTTAAACTTCGA.................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................CCAACGATTTAAACGTCGA.................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0
...........................................AGGTAAGGTAATCTATT.............................................................................................................................................................................................. 17 2 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................GATACGATTTAAACTTCGA.................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

ATGCTCTTACAGTAAAGGCTCCCTCAGCTCCCGTAACTCGTGGTCCTTTCCATTCGATAAGGTCAATGATGAACTATAATCTATGTTAAATTCTATCTAGCAAAATAACAATTAAATGTGCTAAATTTGCAGCTCTAATCGACTTATTATCCAGAAATGTGTCGTATGTGGGGTATTATATAATATAATAAAAAACCGTTAATAGCGAAAATCTACAATCGTATCTTTTAAGACTAATCAGTAGAAGGGT
********************************************************************************************************.((..........((((....((.(((((.(((((........)))))..)))))))....))))....))*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
..............................................................TCAATGATGAACTATAAT.......................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................CTTATTATGCAGACATGTGACGT..................................................................................... 23 3 1 1.00 1 0 1 0 0 0
....................................................................................................................TGTGCTAAGTTTGCA....................................................................................................................... 15 1 2 0.50 1 0 0 1 0 0
...................................................................................TGTTAAAATCTATCTAGCGA................................................................................................................................................... 20 2 2 0.50 1 0 0 0 1 0
...............................................................................................................................................................................TTATATTATTTATTAAAAAACCGT................................................... 24 3 7 0.14 1 0 0 1 0 0
...............................................................................TCTATGTTAGATTCT............................................................................................................................................................ 15 1 17 0.06 1 0 0 0 0 1
.....................................................................................................................................................TCCAGATATGGGTCGT..................................................................................... 16 2 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:4453044-4453293 - dsi_1467 TACGAGAATGTCATTTCCGAGGGAGTCGAGGGCATTGAGCACCAGGAAAGGTAAGCTATT-------------------------------------CCAGTTACTACTTGATATTAGATACAAT---TTAAGATAGATCGTTTTATTGTTAATTTAC------------ACGATTTAAACGTCGAGATTAGCTGAATAATAGGTCTTTACA------------------------------------------------------------------------------------------------------------------------------------CAG----------------------------------------------------------------------------------------------------------------------------------------CATACACC---CCATAA---TATATTATAT---TAT-TT--------TTTGGCAATTATCGCTTTTAGATGTTAGCATAGAAAATTCT-GATTAGTCATCTTCCCA
droSec2 scaffold_1:1268549-1268803 - TACGAGAATGTCATTTCCGAGGGAGTCGAGGGCATTGAGCACCAGGAAAGGTAAGCTATT-------------------------------------CTGGTTACTACTTGATATTAGATACAATAAGTTTAGATAGATCGTTTTATTGTTAATTTAC------------CCGATTTAAAGGTCGAGATTAGCTGAATAATAGGTCATTACA------------------------------------------------------------------------------------------------------------------------------------CAG----------------------------------------------------------------------------------------------------------------------------------------CATACACC---CCATAATATGATATTATAT---TAT-T---------TTTGGCAATTATCGCTTTTAGATGTTAGCATAGAAAATTCT-GATTAGTCATCTTCCCA
dm3 chr2R:3613054-3613243 - TACGAGAATGTCATTTCCGAGGGAGTCGAGGGCATTGAGCATCAGGAAAGGTAAGCAATT-------------------------------------A---------TTTGATATTAGATGCAATAAGTTCA-------------------------------------------------------TTTAGCTCTATAATAGGCCTTTACT------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------TAATATTATATTTTAT---TAT-T---------TTTGAAAATTATCGCTTTTAGATATTAGCATAGAAAATTCT-GATTATTCATATTCCCA
droEre2 scaffold_4929:18994496-18994736 + TACGAGAATGTCATTTCCGAGGGAGTAGAGGGCATTGAGCACCAGGAAAGGTAAGTCATT-------------------------------AATTCTCCTGCCACCAAACGACA----------G---TTTAGATAGATAATTT-GTGTTTAACTTTC------------TCGTTTTAAATGTGGCGACTTGCTTAATAATAGCTCTTCTC-------------------------------------------------------------------------------------------------------------------------------------CAG----------------------------------------------------------------------------------------------------------------------------------------CATACTAC---GTAG-----AATATTATGT---TAT-T---------TTTGGCAAATATCGCTTTAAAATGTTAGCACAGAAAGTTCT-GTTTACTCACATTCTCA
droYak3 2L:16285703-16285908 - TACGAGAATGTCATTTCCGAGGGAGTCGAGGGCATTGAGCACCAGGAGAGGTAAGCTATT-------------------------------------TTTGTTACTTAT---TACCAAACGAAAT---TTCAGATAG--------------------------------------------------ATTCGCTAAATAATAGCACTTCGCC------------------------------------------------------------------------------------------------------------------------------------CAA----------------------------------------------------------------------------------------------------------------------------------------TATATTAT---GTAT-----AATATTATAT---TAT-T---------GTTGGAAATTATTGCTTCATTATGTTAGCATGGAAAATTCT-GGTTAGTCATATTCCCA
droEug1 scf7180000409672:5632721-5632979 - TACGAGAACGTCATATCCGAGGGAGTCGAGGGAATCGAGCACCAGGAAAGGTGAGTTTAG-------------------------------------TT--------------------------------------------TTAATGTTAGTCAAATAATCTTAATCTTAAACTTAAATGTCAAA----------------------------------------------------------------------------------------------------------------------------------------GAAAAATATCAATACTTTGCTTAATAGTTTATAGAATTCGTTACAAATATTTAGCCAGGT---------------------------------------------------------------------------AACTT-----------------TAACAAACAATAATAAAGA------------AGCTCAAT-GG--------CTTGACATTTGTCACTTTAAAATATTATCATAGAAAAGTCTAGGCCAGCGGTATTCCCA
droBia1 scf7180000301506:707501-707818 + TACGAGAACGTCATATCCGAGGGCGTCGAGGGGATTGAGCACCAGGAAAGGTATGTTAAG-------------------------------AAATC-------------AAAT----------------------------------------------AA---------------------------------------------------------------------------ATAGCTTAGAGTGAATTTAGAGT-----TGCCTT-----------------------------TTGATCAGAAAATAAGTAAATAAAAAAATAAAT-CT-ATATTGTTGTATAATTTAAAAACATCTTAAGAA------ATCCAAACAGTTTAGCGCAGCGAAGTAACAAATTATTTATTT-------------AAC----------------------AATCTCACTTTTATAACTATTAAGTCAGCAAA------------------TATTTAGGTATTGT-AG--------CCTGACATTTATGGTCTTTAAATATTAACATCGAAAATTCT-GGCAAGAGATA-TCCAA
droTak1 scf7180000415870:243121-243398 + TATGAAAATGTCATATCCGAGGGTGTAGAGGGTATTGAGCACCAGGAAAGGTACGTTTTG-------------------------------------GCAATAACCTT---------------------------------------------------------------------------------------------------TTATATTAATATATGTTACAATAATACAAGA-------TGTAT-TTT--------------------------------------------------------------------------------------------ATGATTTAAAAACATCATAAGAA------AGCCAGACAGTTTATCACAGCAAA---------TATTTAATTTTTA----------------------------------------------ATAACTATTTACTCAGCAAACAAGAGTACAGAA---ACTATTAAAGTTCGAT-AG--------CTTGAC-ACTATGGCTTTAAAGTATTAGCATCGAAAATTCT-GGCTAGAGATATTCCAA
droEle1 scf7180000491347:499919-500164 - TACGAGAATGTCATATCCGAGGGCGTCGAGGGGGTTGAGCACCAGGAAAGGTAAGTCTGA-------------------------------------CTTGCTACTTATTAAAATTAT-------------AATTCTACA-----------------------------------------------------------------------------------------------ATTGGTAC-----------ATATCTGTGCCGCCCTATCAATATTAGAAGATAATCTTGCAAGCTTTG--------------------------------------------------------------------------------------------GCAAT---------GACATAAATCGGC----------------------------------------------ATCACTTTTTTATGGACAATCTAATTTAT--------------------------------------AT-TCTTTGATTTTTTCATATTTACACGTAAGAATTT-GTCTAGAGAGTTTGCAA
droRho1 scf7180000780226:36036-36302 - TACGAGAATGTCATTTCCGAGGGCGTCGAGGGGGTTGAGCACCAGGAAAGGTAGGTTTTG-------------------------------------CTT---ACTT-----------------------------------------GT-GATCATACTGCCTAAATCTCAAATT-----------------------------------------------------------------------------------------------------------------CTTATAGGGTTTGGGATGAAAATGGG---ATAAGAAATTTATT-CG-TAATTTTTCTAT--------------------------------------------------------------------------------TTTATATTTCCACATGAAATAGTTTTGGGTTTCTCTTTTAAACCTC-----------------------------------------TTCTAGGCTTAAATTGCAGACATTTATCGTTTTAAAATATTAACATAGAAAATTCT-GGCTGCAGATATTCCAA
droFic1 scf7180000453215:602780-603046 + TACGAGAACGTCATTTCCGAGGGCGTCGAGGGCATTGAGCATCAGGAAAGGTAAGTTTTA--------------CACCTTATTTCTGTCAGAAATC-------------TACT--------------------------------------------------------------------------------------------------------------------------AATAGCCCAGTATAA-TTTATAGCTAGAGGGCCACATTAGAATTATAA------------------------------------------AATATTT-CA-GGGGCTTACAAC-------------------------------------------------------------------TTTCTTATGCCGATATATGTTCATACACCAAATTGCTTT---------------------------------------------------------AGTTAAAT-ACCTTAAACTGCGGACATTAATCGATTTAAGATCTTAAC--AGAATGTTCT-GGCAAATTTTGTTTCAA
droKik1 scf7180000302277:1227738-1227792 - TATGAGAATGTCATATCCGAAGGAGTAGAAGGCATCGAGCACCAAGAGAGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:10120593-10120653 - TATGAGAATGTCATATCGGAGGGTGTGGAGGGAATCGAGCATCAGGAAAGGTGAGTGCTT-------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396428:539364-539469 - TATGAGAATGTCATATCCGAGGGCGTTGAGGGAATCGAGCATCAGGAAAGGTGAGTGCTTCTCTTAAAACTTTACAAAATAAGTATT----------TTAGATA---ATTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGA-------------------------
dp5 3:2644585-2644639 + TATGAGAATGTCATATCCGAGGGCGTCGAGGGGATCGAGCACCAGGAGAGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_2:2830954-2831008 + TATGAGAATGTCATATCCGAGGGCGTCGAGGGGATCGAGCACCAGGAGAGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004513:1020625-1020685 - TATGAGAATGTCATCTCAGAAGGTGTTGAGGGCATAGAGCATCAAGAGAGGTAAGTTGTC-------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:833155-833209 - TATGAGAGTGTCGTTGCCGAGGGCATTGAAGGCATGGAGCATCAAGAGAGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:3857757-3857811 - TATGAGAACGTCGTTGCTGAGGGCATTGAGGGCATGGAGCATCAAGAGCGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:10121294-10121348 + TACGAGAGCGTCGTTGCCGAGGGCATTGAGGGCATGGAGCATCAAGAGCGGTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TACGAGAATGTCATTTCCGAGGGAGTCGAGGGCATTGAGCACCAGGAAAGGTAAGCTATT-------------------------------------CCAGTTACTACTTGATATTAGATACAAT---TTAAGATAGATCGTTTTATTGTTAATTTAC------------ACGATTTAAACGTCGAGATTAGCTGAATAATAGGTCTTTACA------------------------------------------------------------------------------------------------------------------------------------CAG----------------------------------------------------------------------------------------------------------------------------------------CATACACC---CCATAA---TATATTATAT---TAT-TT--------TTTGGCAATTATCGCTTTTAGATGTTAGCATAGAAAATTCT-GATTAGTCATCTTCCCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................GGAAAGGTAAGCTATT-------------------------------------CCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200002000000000000
................................................................................................................TATTAGATACAAT---TTAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200000200000000000
.............................................................................................................................................................................ATTTAAACGTCGAGATTAGCTGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAATTCT-GATTAGTCATCTTCCC.2611.00100100000000000000
............................................................................................................................................................................................................TCTTTACA------------------------------------------------------------------------------------------------------------------------------------CAG----------------------------------------------------------------------------------------------------------------------------------------CATACACC---CC.............................................................................................2111.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAGAAAATTCT-GATTAGTCA........2211.00100100000000000000
droSec2
TACGAGAATGTCATTTCCGAGGGAGTCGAGGGCATTGAGCACCAGGAAAGGTAAGCTATT-------------------------------------CTGGTTACTACTTGATATTAGATACAATAAGTTTAGATAGATCGTTTTATTGTTAATTTAC------------CCGATTTAAAGGTCGAGATTAGCTGAATAATAGGTCATTACA------------------------------------------------------------------------------------------------------------------------------------CAG----------------------------------------------------------------------------------------------------------------------------------------CATACACC---CCATAATATGATATTATAT---TAT-T---------TTTGGCAATTATCGCTTTTAGATGTTAGCATAGAAAATTCT-GATTAGTCATCTTCCCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................CCGAGGGAGTCGAGGGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
..CGAGAATGTCATTTCCGAGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
............ATTTCCGAGGGAGTCGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...GAGAATGTCATTTCCGAGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
dm3
TACGAGAATGTCATTTCCGAGGGAGTCGAGGGCATTGAGCATCAGGAAAGGTAAGCAATT-------------------------------------A---------TTTGATATTAGATGCAATAAGTTCA-------------------------------------------------------TTTAGCTCTATAATAGGCCTTTACT------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------TAATATTATATTTTAT---TAT-T---------TTTGAAAATTATCGCTTTTAGATATTAGCATAGAAAATTCT-GATTATTCATATTCCCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................AGTCGAGGGCATTGAGCATCAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCGAGGGCATTGAGCATCAGGAAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................CGAGGGCATTGAGCATCAGGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000
............ATTTCCGAGGGAGTCGAGGGCATTGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000
............ATTTCCGAGGGAGTCGAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.....................GGAGTCGAGGGCATTGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000
..........................CGAGGGCATTGAGCATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..........................CGAGGGCATTGAGCATCAGGAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................GGGCATTGAGCATCAGGAAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGAATGTCATTTCCGAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................GAGGGAGTCGAGGGCATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGTCATTTCCGAGGGAGTCGAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GGCATTGAGCATCAGGAAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGAGAATGTCATTTCCGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AATGTCATTTCCGAGGGAGTCGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-T---------TTTGAAAATTATCGCTTTTAGAT....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................GAGGGAGTCGAGGGCATTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................CGAGGGAGTCGAGGGCATTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........GTCATTTCCGAGGGAGTCGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........TGTCATTTCCGAGGGAGTCGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............TTCCGAGGGAGTCGAGGGCATTGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........CATTTCCGAGGGAGTCGAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................TCGAGGGCATTGAGCATCAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGAGAATGTCATTTCCGAGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GAGTCGAGGGCATTGAGCATCAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TATTAGATGCAATAAGTTCG-------------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...GAGAATGTCATTTCCGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GAGGGAGTCGAGGGCATTGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................CCGAGGGAGTCGAGGGCATTGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...GAGAATGTCATTTCCGAGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GAGTCGAGGGCATTGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........TGTCATTTCCGAGGGAGTCGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....GAATGTCATTTCCGAGGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ATGTCATTTCCGAGGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................CCGAGGGAGTCGAGGGCATTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGGGAGTCGAGGGCATTGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTCGAGGGCATTGAGCATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........TCATTTCCGAGGGAGTCGAGGGCATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...GAGAATGTCATTTCCGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCCGAGGGAGTCGAGGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........CATTTCCGAGGGAGTCGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
droEre2
TACGAGAATGTCATTTCCGAGGGAGTAGAGGGCATTGAGCACCAGGAAAGGTAAGTCATT-------------------------------AATTCTCCTGCCACCAAACGACA----------G---TTTAGATAGATAATTT-GTGTTTAACTTTC------------TCGTTTTAAATGTGGCGACTTGCTTAATAATAGCTCTTCTC-------------------------------------------------------------------------------------------------------------------------------------CAG----------------------------------------------------------------------------------------------------------------------------------------CATACTAC---GTAG-----AATATTATGT---TAT-T---------TTTGGCAAATATCGCTTTAAAATGTTAGCACAGAAAGTTCT-GTTTACTCACATTCTCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........GTCATTTCCGAGGGAGTAGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.......ATGTCATTTCCGAGGGAGTAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.......ATGTCATTTCCGAGGGAGTAGAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.........GTCATTTCCGAGGGAGTAGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
................................................................................................................................................................................................................CTC-------------------------------------------------------------------------------------------------------------------------------------CAG----------------------------------------------------------------------------------------------------------------------------------------CATACTAC---GTAG-----A.....................................................................................1911.0010000010
...GAGAATGTCATTTCCGAGGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
........TGTCATTTCCGAGGGAGTAGAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
droYak3
TACGAGAATGTCATTTCCGAGGGAGTCGAGGGCATTGAGCACCAGGAGAGGTAAGCTATT-------------------------------------TTTGTTACTTAT---TACCAAACGAAAT---TTCAGATAG--------------------------------------------------ATTCGCTAAATAATAGCACTTCGCC------------------------------------------------------------------------------------------------------------------------------------CAA----------------------------------------------------------------------------------------------------------------------------------------TATATTAT---GTAT-----AATATTATAT---TAT-T---------GTTGGAAATTATTGCTTCATTATGTTAGCATGGAAAATTCT-GGTTAGTCATATTCCCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGAAAATTCT-GGTTAGTC.........2211.00100100000000
.....GAATGTCATTTCCGAGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........GTCATTTCCGAGGGAGTCGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
............ATTTCCGAGGGAGTCGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
........................GTCGAGGGCATTGAGCACCAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....GAATGTCATTTCCGAGGGAGTCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
......AATGTCATTTCCGAGGGAGTCGAGGGCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGCATGGAAAATTCT-GGT..............2111.00101000000000
.......ATGTCATTTCCGAGGGAGTCGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.................................ATTGAGCACCAGGAGAGGTAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
TACGAGAACGTCATATCCGAGGGAGTCGAGGGAATCGAGCACCAGGAAAGGTGAGTTTAG-------------------------------------TT--------------------------------------------TTAATGTTAGTCAAATAATCTTAATCTTAAACTTAAATGTCAAA----------------------------------------------------------------------------------------------------------------------------------------GAAAAATATCAATACTTTGCTTAATAGTTTATAGAATTCGTTACAAATATTTAGCCAGGT---------------------------------------------------------------------------AACTT-----------------TAACAAACAATAATAAAGA------------AGCTCAAT-GG--------CTTGACATTTGTCACTTTAAAATATTATCATAGAAAAGTCTAGGCCAGCGGTATTCCCASizeHit CountTotal NormTotal
No Reads
droBia1
TACGAGAACGTCATATCCGAGGGCGTCGAGGGGATTGAGCACCAGGAAAGGTATGTTAAG-------------------------------AAATC-------------AAAT----------------------------------------------AA---------------------------------------------------------------------------ATAGCTTAGAGTGAATTTAGAGT-----TGCCTT-----------------------------TTGATCAGAAAATAAGTAAATAAAAAAATAAAT-CT-ATATTGTTGTATAATTTAAAAACATCTTAAGAA------ATCCAAACAGTTTAGCGCAGCGAAGTAACAAATTATTTATTT-------------AAC----------------------AATCTCACTTTTATAACTATTAAGTCAGCAAA------------------TATTTAGGTATTGT-AG--------CCTGACATTTATGGTCTTTAAATATTAACATCGAAAATTCT-GGCAAGAGATA-TCCAASizeHit CountTotal NormTotal
No Reads
droTak1
TATGAAAATGTCATATCCGAGGGTGTAGAGGGTATTGAGCACCAGGAAAGGTACGTTTTG-------------------------------------GCAATAACCTT---------------------------------------------------------------------------------------------------TTATATTAATATATGTTACAATAATACAAGA-------TGTAT-TTT--------------------------------------------------------------------------------------------ATGATTTAAAAACATCATAAGAA------AGCCAGACAGTTTATCACAGCAAA---------TATTTAATTTTTA----------------------------------------------ATAACTATTTACTCAGCAAACAAGAGTACAGAA---ACTATTAAAGTTCGAT-AG--------CTTGAC-ACTATGGCTTTAAAGTATTAGCATCGAAAATTCT-GGCTAGAGATATTCCAASizeHit CountTotal NormTotal
No Reads
droEle1
TACGAGAATGTCATATCCGAGGGCGTCGAGGGGGTTGAGCACCAGGAAAGGTAAGTCTGA-------------------------------------CTTGCTACTTATTAAAATTAT-------------AATTCTACA-----------------------------------------------------------------------------------------------ATTGGTAC-----------ATATCTGTGCCGCCCTATCAATATTAGAAGATAATCTTGCAAGCTTTG--------------------------------------------------------------------------------------------GCAAT---------GACATAAATCGGC----------------------------------------------ATCACTTTTTTATGGACAATCTAATTTAT--------------------------------------AT-TCTTTGATTTTTTCATATTTACACGTAAGAATTT-GTCTAGAGAGTTTGCAASizeHit CountTotal NormTotal
No Reads
droRho1
TACGAGAATGTCATTTCCGAGGGCGTCGAGGGGGTTGAGCACCAGGAAAGGTAGGTTTTG-------------------------------------CTT---ACTT-----------------------------------------GT-GATCATACTGCCTAAATCTCAAATT-----------------------------------------------------------------------------------------------------------------CTTATAGGGTTTGGGATGAAAATGGG---ATAAGAAATTTATT-CG-TAATTTTTCTAT--------------------------------------------------------------------------------TTTATATTTCCACATGAAATAGTTTTGGGTTTCTCTTTTAAACCTC-----------------------------------------TTCTAGGCTTAAATTGCAGACATTTATCGTTTTAAAATATTAACATAGAAAATTCT-GGCTGCAGATATTCCAASizeHit CountTotal NormTotal
No Reads
droFic1
TACGAGAACGTCATTTCCGAGGGCGTCGAGGGCATTGAGCATCAGGAAAGGTAAGTTTTA--------------CACCTTATTTCTGTCAGAAATC-------------TACT--------------------------------------------------------------------------------------------------------------------------AATAGCCCAGTATAA-TTTATAGCTAGAGGGCCACATTAGAATTATAA------------------------------------------AATATTT-CA-GGGGCTTACAAC-------------------------------------------------------------------TTTCTTATGCCGATATATGTTCATACACCAAATTGCTTT---------------------------------------------------------AGTTAAAT-ACCTTAAACTGCGGACATTAATCGATTTAAGATCTTAAC--AGAATGTTCT-GGCAAATTTTGTTTCAASizeHit CountTotal NormTotal
No Reads
droKik1
TATGAGAATGTCATATCCGAAGGAGTAGAAGGCATCGAGCACCAAGAGAGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TATGAGAATGTCATATCGGAGGGTGTGGAGGGAATCGAGCATCAGGAAAGGTGAGTGCTT-------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............TCGGAGGGTGTGGAGGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002110000
.............TATCGGAGGGTGTGGAGGGAATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
............ATATCGGAGGGTGTGGAGGGAATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...........CATATCGGAGGGTGTGGAGGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.................GGAGGGTGTGGAGGGAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...GAGAATGTCATATCGGAGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............ATCGGAGGGTGTGGAGGGAATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
................CGGAGGGTGTGGAGGGAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.................................ATCGAGCATCAGGAAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droBip1
TATGAGAATGTCATATCCGAGGGCGTTGAGGGAATCGAGCATCAGGAAAGGTGAGTGCTTCTCTTAAAACTTTACAAAATAAGTATT----------TTAGATA---ATTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGA-------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TATGAGAATGTCATATCCGAGGGCGTCGAGGGGATCGAGCACCAGGAGAGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............ATATCCGAGGGCGTCGAGGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................GAGGGCGTCGAGGGGATCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........................GAGGGGATCGAGCACCAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............ATCCGAGGGCGTCGAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
droPer2
TATGAGAATGTCATATCCGAGGGCGTCGAGGGGATCGAGCACCAGGAGAGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........CATATCCGAGGGCGTCGAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....GAATGTCATATCCGAGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
TATGAGAATGTCATCTCAGAAGGTGTTGAGGGCATAGAGCATCAAGAGAGGTAAGTTGTC-------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................GGTGTTGAGGGCATAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200
..........................TGAGGGCATAGAGCATCAAGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200
........................GTTGAGGGCATAGAGCATCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
........................GTTGAGGGCATAGAGCATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
........................GTTGAGGGCATAGAGCATCAAGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
..........................TGAGGGCATAGAGCATCAAGAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.....GAATGTCATCTCAGAAGGTGTTGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.....................GGTGTTGAGGGCATAGAGCATCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.....................GGTGTTGAGGGCATAGAGCATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.........................TTGAGGGCATAGAGCATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.......................TGTTGAGGGCATAGAGCATCAAGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.ATGAGAATGTCATCTCAGAAGGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.....GAATGTCATCTCAGAAGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
......................GTGTTGAGGGCATAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
.....................GGTGTTGAGGGCATAGAGCATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
...................AAGGTGTTGAGGGCATAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
......................GTGTTGAGGGCATAGAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
......................GTGTTGAGGGCATAGAGCATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...GAGAATGTCATCTCAGAAGGTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
......................GTGTTGAGGGCATAGAGCATCAAGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
droVir3
TATGAGAGTGTCGTTGCCGAGGGCATTGAAGGCATGGAGCATCAAGAGAGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................GAGGGCATTGAAGGCATGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..........................TGAAGGCATGGAGCATCAAGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
............GTTGCCGAGGGCATTGAAGGCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
...GAGAGTGTCGTTGCCGAGGGCATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.............................AGGCATGGAGCATCAAGAGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................ATTGAAGGCATGGAGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.............TTGCCGAGGGCATTGAAGGCATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..TGAGAGTGTCGTTGCCGAGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000001000000000000000000000000000000000000000000000000000000
.....GAGTGTCGTTGCCGAGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
...............GCCGAGGGCATTGAAGGCATGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.ATGAGAGTGTCGTTGCCGAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
..............TGCCGAGGGCATTGAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.......GTGTCGTTGCCGAGGGCATTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
........................ATTGAAGGCATGGAGCATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
TATGAGAACGTCGTTGCTGAGGGCATTGAGGGCATGGAGCATCAAGAGCGGTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....GAACGTCGTTGCTGAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002100001
...............GCTGAGGGCATTGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.................TGAGGGCATTGAGGGCATGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
......................GCATTGAGGGCATGGAGCATCAAGAGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
.....................GGCATTGAGGGCATGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
............GTTGCTGAGGGCATTGAGGGCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..................GAGGGCATTGAGGGCATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
..................GAGGGCATTGAGGGCATGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...............GCTGAGGGCATTGAGGGCATGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........TCGTTGCTGAGGGCATTGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................GAGGGCATGGAGCATCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droGri2
TACGAGAGCGTCGTTGCCGAGGGCATTGAGGGCATGGAGCATCAAGAGCGGTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........GTCGTTGCCGAGGGCATTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110

Generated: 05/19/2015 at 12:33 AM