ID:

dsi_14657

 Coordinate:

3l:14396669-14396818 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.3 -14.3 -14.3

Flybase annnotation

five_prime_UTR [3l_14396203_14396668_-]; exon [3l_14396203_14396668_-]; CDS [3l_14396203_14396668_-]; exon [3l_14396203_14396668_-]; intron [3l_14396669_14399028_-]; intron [3l_14396669_14399028_-]

No Repeatable elements found

mature
  1. dsi_14657  3l:14396770-14396785 -
  2. node_29836:101-116 +
star

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGAAAATTTATATAATATATATTATATATATATATTTTTTTTTGGTTATCGTGCATACCTTAAACAATAAAGGAAATAAATATTTCTAAACCATTTAAAATCAATCCCATTAGTTATGGGACTAGCCATATTACTTCTATAAATGAAAACTTATTAGCTCTAAATAAATTAAATTATATGTGTTTTCTTGATCTTTACAGAATACACCATGCAAGCATCCAGTGGTAATGTTGGCTGGCGTCAATGCGAA
**************************************************...................(((((((((.((((.....................((((((.....))))))..(((.(((....(((.......)))....)))..)))................)))).)))))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M025
embryo
 O002
Head
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
...................................................................................TTCTAAACCATTTAAAGT..................................................................................................................................................... 18 1 1 229.00 229 104 85 7 10 9 3 0 4 3 3 1 0 0 0
..................................................................................CTTCTAAACCATTTAAAGT..................................................................................................................................................... 19 2 6 85.00 510 260 58 12 12 38 42 52 25 6 0 5 0 0 0
...................................................................................TTCTAAACCATTTAAAGTT.................................................................................................................................................... 19 2 17 34.41 585 156 404 3 3 6 4 0 2 1 0 6 0 0 0
....................................................................................TCTAAACCATTTAAAGT..................................................................................................................................................... 17 1 2 20.00 40 0 0 30 5 0 0 0 0 4 0 0 1 0 0
.....................................................................................CTAAACCATTTAAAGT..................................................................................................................................................... 16 1 11 6.91 76 0 0 14 34 0 0 0 0 20 6 0 2 0 0
...................................................................................TTCTAAACCATTTAAA....................................................................................................................................................... 16 0 2 1.50 3 0 0 0 2 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................AATACACCATGCAAGCATCCAGTGGTA....................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................TTCTAAACCATTTAAAG...................................................................................................................................................... 17 1 2 1.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................TCTAAACCATTTAAAGTC.................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................TCTAAACCATTTAAAG...................................................................................................................................................... 16 1 8 0.38 3 0 0 1 1 0 0 0 0 1 0 0 0 0 0
..................................................................................CTTCTAAACCATTTAAAGTTAAT................................................................................................................................................. 23 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................TCTAAACCATTTAAAGTCT................................................................................................................................................... 19 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................TTATGGTTATCGTGCA................................................................................................................................................................................................... 16 1 6 0.33 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0
..................................................................................TTTCTAAACCATTTAAAGTT.................................................................................................................................................... 20 2 8 0.25 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTACAGAATACACTATACA..................................... 20 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................GTTCTAAACCATTTAAAGT..................................................................................................................................................... 19 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................ATTCTAAACCATTTAAAGT..................................................................................................................................................... 19 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GTTACTGAATACACCAT........................................ 17 2 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TTCTAAACCATTTAAAGG..................................................................................................................................................... 18 2 17 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATTACTTCTATCAAAAAAAA..................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................TCTAAACCATTTAAAGTG.................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................TTCTAAACCATTTAAAGC..................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................TTCTAAACCATTTAAAGTGT................................................................................................................................................... 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................AACTTCTAAACCATTTAAAG...................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCTTTTAAATATATTATATATAATATATATATATAAAAAAAAACCAATAGCACGTATGGAATTTGTTATTTCCTTTATTTATAAAGATTTGGTAAATTTTAGTTAGGGTAATCAATACCCTGATCGGTATAATGAAGATATTTACTTTTGAATAATCGAGATTTATTTAATTTAATATACACAAAAGAACTAGAAATGTCTTATGTGGTACGTTCGTAGGTCACCATTACAACCGACCGCAGTTACGCTT
**************************************************...................(((((((((.((((.....................((((((.....))))))..(((.(((....(((.......)))....)))..)))................)))).)))))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 M023
head
.............................................................................................AAATTTTAGTTAGGGTT............................................................................................................................................ 17 1 3 1.00 3 3 0 0 0 0 0
..................................................................................................................................................................................ACAAAAAAGAACTAGAA....................................................... 17 1 2 0.50 1 0 1 0 0 0 0
.................................................................................AAAAGATTTGGTAAATTT....................................................................................................................................................... 18 1 3 0.33 1 0 0 1 0 0 0
.....................................................................................................................................................GAATAATCGAGAAATATTTTAT............................................................................... 22 3 8 0.13 1 0 0 0 1 0 0
.............................................................................................AAATTTTAGTTAGGGTTG........................................................................................................................................... 18 2 20 0.10 2 2 0 0 0 0 0
..............................................................................................AATTTTAGTTAGGGTT............................................................................................................................................ 16 1 11 0.09 1 0 0 1 0 0 0
......................................................................................ATTAGGTGAATTTTAGTAAGG............................................................................................................................................... 21 3 15 0.07 1 0 0 0 0 1 0
...................ATAATATATATATAGGAAA.................................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:14396619-14396868 - dsi_14657 AGAA-----AATTTATATAAT------------------------------------------------------------------------------------------------ATATATTATATATATA--------------------TATTT-------------------------------------------------------TTTTTTGGTTATCGTGCATACCTTAA-AC-------AATA------AAGGAAATAAATATT-----------------------------------------------------------------------------------------------------------------TCTAAACCATTTAAAATCAA------------------------------------------------------------------------------------------------TCCCATTAGTTATGGGACTAGCCATATTACTTCTATAAATGAAAACTTATT-A--GCT------------CTAAA-------TAAAT-TAAA------TTATATGTGTT-------------------------------------------------------------------------------------------------T-TCTTGA---------------TCTTTACAGAATACACCATGCAAGCATCCAGTGGTAATGTTG-GCTGGCGTCAATGCGAA
droSec2 scaffold_0:6868560-6868798 - dse_454 AGAA-----AATTTATATAACTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGGT-TTGGTTATCGCACATACCTTAA-AC-------CATA------AAGGAAATAAATATT-----------------------------------------------------------------------------------------------------------------TCTAAACCATTTAAAATCAATAAAT---------------------------------------------------------------------------------------TCAATCCCATTAGTTATGAGACTAGGTATATTACTTCTATAAATG---ACTTATT-A--GCT------------CTAAA-------TAAAT-TAAA------TTATATGTGTT-------------------------------------------------------------------------------------------------T-TCTTGA---------------TCTTTACAGAATACACCATGCAAGCATCCAGTGGTAATGTTG-GCTGGCGTCAATGCGAA
dm3 chr3L:14747601-14747855 - AGAA-----AATTTCTATAACTT-----------------------------------------------------------------------------------------ACTA----------------------------------------------------------------------------GAA---------------ACCGGTTTTGGTTATCGTACATACCTTAA-AC-------AATA------GAG-----AAATATT-----------------------------------------------------------------------------------------------------------------TATATATCATTTAAAATCAATT--------------------------------------TATCTTGCCCTAT------------------------TCTTAATAACTCCTTTTAATCTCATTAGTT---------------TTACTTATATAAATACAAACTTATC-A--GCT------------CTAAA-------TAAAT-TAGA------TTATATATGTC-------------------------------------------------------------------------------------------------T-TCTCGA---------------TATTTACAGAATACACCATGCAAGCATCCAGTGGTTATGTTG-GCTGGCGTCAATGCGAA
droEre2 scaffold_4784:14714018-14714322 - ATGA-----TATA------AC-----------------------------------------GTAGTTATATAAGATTTGTAGTTTTCATTTAGCACATATATATAAATTTTACTA----------------------------------------------------------------------------GAA---------------ACCGGTTTTGGCTATCGGACATAATTTTATGC-------GAAA------GAGA--AAAAATAGT--------------------------------------------------------------------------------------------------------------TACTATATACCAACTGAAATCAAGA----------------------------------------------------------------------------------------------------------------------------------------AAGCCT-CC-AGCACT------------CTAGG-------TATAC-TAAATAATAC-------------TAATATCGTTTTTTAGTTACCTGATAATATATCAACAAGTCACACCC-TTCTTACTTATCTGA-----------------------TT-T-----T-CCT-GA---------------TTTTTACAGAACACACCATGCAAGCATCCAGTGGTGATGTTG-GCTGGCGTCAATGCGAA
droYak3 3L:14834692-14835104 - AAAT-----AAACACGTTTCCTTCAAGAAATGGAATTTTATACTGCGATACAATGATACAACG---TTATAAAAGATTTATAGTTTTCATTTAGCAGATTTA------------TA----------------------------------------------------------------------------GAA---------------ACTGGTTTTGGTTATCGAACTTAATTTTA-TT-------TATAGAAATGGAGAATAAAAATAGT-----------------------------------------------------------------------------------------------------------------TCTATATCATCTAAAATCTATTTA-------------------------------------------CACTAT------------------------TGTACATAACTCTTTATTATCCCTTTAGTTGTGTGACTATGTGTAATTCCCATATAAAAGAAAGCCT-CT-AGTGCT------------CTAGG-------AATAT-TAA--------------------CGATATCGTTTTATAGTTAATTGATAATATATCAACATTTCACACCATTTTTTACTTATCTGT--------------TA-TATAAATTTG-----T-CCT-AA---------------TTTTTACAGAATACACCATGCAAGCATCCAGTAGTAATGTTG-GCTGGCGTCAATGCGAA
droEug1 scf7180000409456:996919-997192 - ACTT-----TGCCTA----GG-------------------------------------------------------------------------------------------------------------------------------ATATACTATTA-----TG-----ATTATTATATTA------------TAATAATGATTATTTTTA--------------------------TGCTA-----GAAA--------------------------------------------------GAGATACCTCA--------------------------------------------------------------------------------------------ATAAATCCAATTATCTTATTTTCGTATATCTCA--------------GATTCATTTTAACGATTCACATATT----------------------------------TTGCATAAT-------------------AATGAGAACATCTT-A--G------------------------AA----------------AGTTGTTT-----------------------------------------------------------ATTATCTGTATTACAAAAATTCATTAATTTAATTTAATTTTT-TCTTT----------------ATATTTTAGAATACACCATGCAAGCATCCAGTGGTAATGTTG-GCCGGCGTAAATGCGAA
droBia1 scf7180000302428:5135998-5136065 + TAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TCCT-T---------------CCTCTTCAGAATACACCATGCAAGCACCCAGTGGTTATGTTG-GCCGGCGTGAATGCGAA
droTak1 scf7180000415135:458909-459131 - AGAA-----AACCTTTCT------------------------------------------------------------------------------------------------TATAA--------------------------ACAATATCTGATTACTTTA-------------------------------------------------------CGTCAT----------TATCCAT--AAAAACGCA------AAGTATACAAGCATTTTCAAC---TGGAATATAAT--ATGCATAGAGATACTTTAATAATAACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACC-----------A------------TTTT----TAAA----------------AGATTTTTATACT----------AC------------------------------CACCC--------------------------------------ATT----TCTT-CATTT----------------ATTTTTTAGAATACACCATGCAAGCATCCAGTGGTAATGTTG-GCTGGCGTAAATGCGAA
droEle1 scf7180000491199:1918791-1918887 - TTAT-----TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAG-------CAAACCTAAA------ATATGTATATT-------------------------------------------------------------------------------------------------T-TGTTC----------------CTTTTCCAGAATACACCATGCAAGCATCCAGTAGTAATGTTG-GCCGGCGTGAATGCCAA
droRho1 scf7180000777233:58972-59272 + AGGA-----ACTATGTAT------------CTGAA------------------------------G---------------------------------------------------TTGTTT-------------ATTTGTAAAGAT-------------------------------------------------------ATAATTTTCC--------------------------AGCTA--------------------------------------------------------------------------------------GTACAATAATTTGTAAAGTGTCACCAT-TTAATCCATGGAAATGTGATTATAGTTCCAATTT--CA----GAGAACATT--------------------------------------TGACTTGTTCAAA--------------TGTTTTTCTCTGAATATAACTCT--------------------------------------CTAGAAACCCAACCTTATTAA--GTT------------CTTAAAAA----TAATT-TA-----------------------AGTTTGTTCC------------------------------CACCT-TTTT-A-A--------------TGCTTGATA----TAATTTG-----T-TCGC-G---------------CGTTTTCAGAATACACCATGTAAGCATCCAGTGGTGATGTTG-GCCGGCGTGAATGCCAA
droFic1 scf7180000453807:203450-203752 - CAAAGGGACAATTTGTATTGGTT---------------------------------------------------------------------------------------------------------AA---------------------------------------ATACATTTTTTTAAGTGTTCGTTAAA---------------AACAGT-------------------------------------------------------GTTTTCAAAGACA--GGTTTGAT--AAAAGTAAAGTTCCTTTAAATTTAATTTAACTATGTATAATGTTTTGTA-ATTGTCATTTTCATAATTGGTGAAAGTTAGAT---ATTTTCGATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------AAC-A--ACAGACAATAAAAACTGTAAT------AATAT-TTAATATTT----------------TGATTATTCC------------------------------CA--------------------------TAATTGATA-GAATAATTTA-----T-T---AT---------------TCATTTTAGAATACACCATGCAAGCATCCAGTGGTGATGTTG-GCCGGCGTGAATGCCAA
droKik1 scf7180000302383:894982-895161 - AAAA-----CATATG--------------------------------------------------------------------------------------------------------------------------------------------GGAAATGTACGTTATTACATTTTTATTA---------GTA---------------TTT-----------------------------------------------------------------------GGAATATATTTAATTTTTGGAAATA-------------------------------------------------------------------ATTATTATT---C---------------------------------------------------------------------------------------------------------------------------------------------------------TG---ACTTTTT-A--CCA------------TTTA----TTAA----------------ATATTTATTTT-------------------------------------------------------------------------------------------------C-CCTTCA------------TTTTAATTACAGAACACACCATGCAAGCACCCAGTTGTGATGTTG-GCCGGCGTCAATGCCAA
droAna3 scaffold_13337:4354722-4354809 + AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAT-TTAA------TTTTATGGCAT-------------------------------------------------------------------------------------------------T-TCTT-G---------------TATTTGTAGAACACCCCATGCAAGCACCCAGTAGTGATGTTG-GCCGGAGTGAATGCCAA
droBip1 scf7180000395450:483869-483984 + CTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATC-A--GCTGATAATAATTTTCCCAGT------TATAT-TAAA------TTTTATGCTTT----------------------------------------------------------------------------------------------TTTTTTCTC-----------------GTTTTCCAGAACACCCCATGCAAGCACCCAGTGGTGATGTTG-GCCGGCGTGAATGCCAA
dp5 XR_group6:1001324-1001380 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATAGAACACACCATGCAAACACCCTGTGGTAATGCTG-GCCGGCGTCAATGCGAA
droPer2 scaffold_12:1680077-1680127 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACACCATGCAAACACCCTGTGGTAATGCTGGGCCGGCGTCAATGCGAA
droWil2 scf2_1100000004949:1097226-1097285 + AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAACAGAACACACCATGCAAACATCCTGTAGTCATGTTG-GCCGGCGTAAATGCTAA
droVir3 scaffold_12875:16406328-16406434 - ACAA-----ATGTAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAAT------ATATAAA---------------------------------------------------------------------------------------------TTG-----TTTGCATATTGTAGACAT-----TGCTGCAAGAACA-GTACGACAAGCATCCAATTTTCATACTC-AAGGATGTCAAGTACCA
droMoj3 scaffold_6680:19847936-19848213 + TGAA-----AATAAATAA------------TTGAA------------------------------T---------------------------------------------------ATATATAATATATTTATATATTTAATAAAGTATATATTATTA---------------------------------------------------ACTTAT----TTTAA----------TATTTA--------------------------AAATATT-----------------------------------------------------------------------------------------------------------------CATATAA-------------TAAA-----------------------TTTCAAATTTATTTATTGTGATTTAA------------------------TTTATTTATTT-----------TCATATATATATCATTATGAGTATTTTTTTCAAATATCAAAA---------------------------------------------A--------------------TGAGTATGATTTAAACA-----------------------------------------------------AAATTGATATCATTAATTTA-----C-TTT-TA---------------TCTTTATAGAACACGCCATGCAAGCATCCAGTGGTGATGTTG-GCTGGCGTCAACGCCAA
droGri2 scaffold_15110:16263899-16264011 + TATA-----TAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAT-ATTA------TTTAATGCATT----------------------------------------------------------------------------------------------CGGTTTGTTGCTTTTTTGCTTTATTAAATATACAGAACACGCCATGCAAACATCCAGTGGTGATGTTG-GCTGGCGTCAATGCCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGAA-----AATTTATATAAT------------------------------------------------------------------------------------------------ATATATTATATATATA--------------------TATTT-------------------------------------------------------TTTTTTGGTTATCGTGCATACCTTAA-AC-------AATA------AAGGAAATAAATATT-----------------------------------------------------------------------------------------------------------------TCTAAACCATTTAAAATCAA------------------------------------------------------------------------------------------------TCCCATTAGTTATGGGACTAGCCATATTACTTCTATAAATGAAAACTTATT-A--GCT------------CTAAA-------TAAAT-TAAA------TTATATGTGTT-------------------------------------------------------------------------------------------------T-TCTTGA---------------TCTTTACAGAATACACCATGCAAGCATCCAGTGGTAATGTTG-GCTGGCGTCAATGCGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................T-----------------------------------------------------------------------------------------------------------------TCTAAACCATTTAAA......................................................................................................................................................................................................................................................................................................................................................................................................1621.50300000021000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACACCATGCAAGCATCCAGTGGTA........................2711.00100000000010000000
.................................................................................................................................................................................................................................................................................T-----------------------------------------------------------------------------------------------------------------TCTAAACCATTTAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................1721.00200000010001000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCTAAACCATTTAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................1680.38300000011001000000
.................................................................................................................................................................................................................................................................................T-----------------------------------------------------------------------------------------------------------------TCTAAACCATTTAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................18170.06101000000000000000
.................................................................................................................................................................................................................................................................................T-----------------------------------------------------------------------------------------------------------------TCTAAACCATTTAAAGC....................................................................................................................................................................................................................................................................................................................................................................................................18200.05100100000000000000
droSec2
AGAA-----AATTTATATAACTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGGT-TTGGTTATCGCACATACCTTAA-AC-------CATA------AAGGAAATAAATATT-----------------------------------------------------------------------------------------------------------------TCTAAACCATTTAAAATCAATAAAT---------------------------------------------------------------------------------------TCAATCCCATTAGTTATGAGACTAGGTATATTACTTCTATAAATG---ACTTATT-A--GCT------------CTAAA-------TAAAT-TAAA------TTATATGTGTT-------------------------------------------------------------------------------------------------T-TCTTGA---------------TCTTTACAGAATACACCATGCAAGCATCCAGTGGTAATGTTG-GCTGGCGTCAATGCGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAGCATCCAGTGGTAATGT....................2311.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCATCCAGTGGTAATGTTG-.................2311.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATCCAGTGGTAATGTTG-GCTGGC...........2711.0010010
dm3
AGAA-----AATTTCTATAACTT-----------------------------------------------------------------------------------------ACTA----------------------------------------------------------------------------GAA---------------ACCGGTTTTGGTTATCGTACATACCTTAA-AC-------AATA------GAG-----AAATATT-----------------------------------------------------------------------------------------------------------------TATATATCATTTAAAATCAATT--------------------------------------TATCTTGCCCTAT------------------------TCTTAATAACTCCTTTTAATCTCATTAGTT---------------TTACTTATATAAATACAAACTTATC-A--GCT------------CTAAA-------TAAAT-TAGA------TTATATATGTC-------------------------------------------------------------------------------------------------T-TCTCGA---------------TATTTACAGAATACACCATGCAAGCATCCAGTGGTTATGTTG-GCTGGCGTCAATGCGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATCCAGTGGTTATGTTG-GCTGGC...........2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTATGTTG-GCTGGC...........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGTTATGTTG-GCTGGCGTCAAT.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCCAGTGGTTATGTTG-.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTC-------------------------------------------------------------------------------------------------T-TCTCGA---------------TATTTA......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGTTATGTTG-GCTGGC...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCCAGTGGTTATGTTG-GCTGGC...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATCCAGTGGTTATGTTG-GCTG.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTACAGAATACACCATGCAAGC...................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACCATGCAAGCATCCAGTGGTTA.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGTTG-GCTGGCGTCAA......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGTGGTTATGTTG-GCT..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCATCCAGTGGTTATGTTG-.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTTG-GCTGGCGTCAATG....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCAGTGGTTATGTTG-.................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTTG-GCTGGCGTCAATGCGA.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTATGTTG-GCTGGCGTCAATGC...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAGCATCCAGTGGT.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCAAGCATCCAGTGGTT........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCATCCAGTGGTTATGTTG-GCTG.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGTTATGTTG-GCTGGCGTC........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTG-GCTGGCGTCAATG....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTATGTTG-GCTGGCGTC........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTTG-GCTGGCGTCAATGCGAA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACCATGCAAGCATCCAGTGGT.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATACACCATGCAAGCATC................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGTTATGTTG-GCTGGGC..........2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
droEre2
ATGA-----TATA------AC-----------------------------------------GTAGTTATATAAGATTTGTAGTTTTCATTTAGCACATATATATAAATTTTACTA----------------------------------------------------------------------------GAA---------------ACCGGTTTTGGCTATCGGACATAATTTTATGC-------GAAA------GAGA--AAAAATAGT--------------------------------------------------------------------------------------------------------------TACTATATACCAACTGAAATCAAGA----------------------------------------------------------------------------------------------------------------------------------------AAGCCT-CC-AGCACT------------CTAGG-------TATAC-TAAATAATAC-------------TAATATCGTTTTTTAGTTACCTGATAATATATCAACAAGTCACACCC-TTCTTACTTATCTGA-----------------------TT-T-----T-CCT-GA---------------TTTTTACAGAACACACCATGCAAGCATCCAGTGGTGATGTTG-GCTGGCGTCAATGCGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAGCATCCAGTGGTGATG.....................2211.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTG-GCTGGCGTCAATGCG..2211.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACACACCATGCAAGCATCC...............................2211.0010100000
droYak3
AAAT-----AAACACGTTTCCTTCAAGAAATGGAATTTTATACTGCGATACAATGATACAACG---TTATAAAAGATTTATAGTTTTCATTTAGCAGATTTA------------TA----------------------------------------------------------------------------GAA---------------ACTGGTTTTGGTTATCGAACTTAATTTTA-TT-------TATAGAAATGGAGAATAAAAATAGT-----------------------------------------------------------------------------------------------------------------TCTATATCATCTAAAATCTATTTA-------------------------------------------CACTAT------------------------TGTACATAACTCTTTATTATCCCTTTAGTTGTGTGACTATGTGTAATTCCCATATAAAAGAAAGCCT-CT-AGTGCT------------CTAGG-------AATAT-TAA--------------------CGATATCGTTTTATAGTTAATTGATAATATATCAACATTTCACACCATTTTTTACTTATCTGT--------------TA-TATAAATTTG-----T-CCT-AA---------------TTTTTACAGAATACACCATGCAAGCATCCAGTAGTAATGTTG-GCTGGCGTCAATGCGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTTG-GCTGGCGTC........1811.00110000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCATGCAAGCATCCAGTA...........................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTTG-GCTGGCGTCAATGC...2311.00100000010000
.......................CAAGAAATGGAATTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1590.22200000000002
droEug1
ACTT-----TGCCTA----GG-------------------------------------------------------------------------------------------------------------------------------ATATACTATTA-----TG-----ATTATTATATTA------------TAATAATGATTATTTTTA--------------------------TGCTA-----GAAA--------------------------------------------------GAGATACCTCA--------------------------------------------------------------------------------------------ATAAATCCAATTATCTTATTTTCGTATATCTCA--------------GATTCATTTTAACGATTCACATATT----------------------------------TTGCATAAT-------------------AATGAGAACATCTT-A--G------------------------AA----------------AGTTGTTT-----------------------------------------------------------ATTATCTGTATTACAAAAATTCATTAATTTAATTTAATTTTT-TCTTT----------------ATATTTTAGAATACACCATGCAAGCATCCAGTGGTAATGTTG-GCCGGCGTAAATGCGAASizeHit CountTotal NormTotal
No Reads
droBia1
TAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TCCT-T---------------CCTCTTCAGAATACACCATGCAAGCACCCAGTGGTTATGTTG-GCCGGCGTGAATGCGAASizeHit CountTotal NormTotal
No Reads
droTak1
AGAA-----AACCTTTCT------------------------------------------------------------------------------------------------TATAA--------------------------ACAATATCTGATTACTTTA-------------------------------------------------------CGTCAT----------TATCCAT--AAAAACGCA------AAGTATACAAGCATTTTCAAC---TGGAATATAAT--ATGCATAGAGATACTTTAATAATAACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACC-----------A------------TTTT----TAAA----------------AGATTTTTATACT----------AC------------------------------CACCC--------------------------------------ATT----TCTT-CATTT----------------ATTTTTTAGAATACACCATGCAAGCATCCAGTGGTAATGTTG-GCTGGCGTAAATGCGAASizeHit CountTotal NormTotal
No Reads
droEle1
TTAT-----TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAG-------CAAACCTAAA------ATATGTATATT-------------------------------------------------------------------------------------------------T-TGTTC----------------CTTTTCCAGAATACACCATGCAAGCATCCAGTAGTAATGTTG-GCCGGCGTGAATGCCAASizeHit CountTotal NormTotal
No Reads
droRho1
AGGA-----ACTATGTAT------------CTGAA------------------------------G---------------------------------------------------TTGTTT-------------ATTTGTAAAGAT-------------------------------------------------------ATAATTTTCC--------------------------AGCTA--------------------------------------------------------------------------------------GTACAATAATTTGTAAAGTGTCACCAT-TTAATCCATGGAAATGTGATTATAGTTCCAATTT--CA----GAGAACATT--------------------------------------TGACTTGTTCAAA--------------TGTTTTTCTCTGAATATAACTCT--------------------------------------CTAGAAACCCAACCTTATTAA--GTT------------CTTAAAAA----TAATT-TA-----------------------AGTTTGTTCC------------------------------CACCT-TTTT-A-A--------------TGCTTGATA----TAATTTG-----T-TCGC-G---------------CGTTTTCAGAATACACCATGTAAGCATCCAGTGGTGATGTTG-GCCGGCGTGAATGCCAASizeHit CountTotal NormTotal
No Reads
droFic1
CAAAGGGACAATTTGTATTGGTT---------------------------------------------------------------------------------------------------------AA---------------------------------------ATACATTTTTTTAAGTGTTCGTTAAA---------------AACAGT-------------------------------------------------------GTTTTCAAAGACA--GGTTTGAT--AAAAGTAAAGTTCCTTTAAATTTAATTTAACTATGTATAATGTTTTGTA-ATTGTCATTTTCATAATTGGTGAAAGTTAGAT---ATTTTCGATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------AAC-A--ACAGACAATAAAAACTGTAAT------AATAT-TTAATATTT----------------TGATTATTCC------------------------------CA--------------------------TAATTGATA-GAATAATTTA-----T-T---AT---------------TCATTTTAGAATACACCATGCAAGCATCCAGTGGTGATGTTG-GCCGGCGTGAATGCCAASizeHit CountTotal NormTotal
No Reads
droKik1
AAAA-----CATATG--------------------------------------------------------------------------------------------------------------------------------------------GGAAATGTACGTTATTACATTTTTATTA---------GTA---------------TTT-----------------------------------------------------------------------GGAATATATTTAATTTTTGGAAATA-------------------------------------------------------------------ATTATTATT---C---------------------------------------------------------------------------------------------------------------------------------------------------------TG---ACTTTTT-A--CCA------------TTTA----TTAA----------------ATATTTATTTT-------------------------------------------------------------------------------------------------C-CCTTCA------------TTTTAATTACAGAACACACCATGCAAGCACCCAGTTGTGATGTTG-GCCGGCGTCAATGCCAASizeHit CountTotal NormTotal
No Reads
droAna3
AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAT-TTAA------TTTTATGGCAT-------------------------------------------------------------------------------------------------T-TCTT-G---------------TATTTGTAGAACACCCCATGCAAGCACCCAGTAGTGATGTTG-GCCGGAGTGAATGCCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTGATGTTG-GCCGGAGTGAATGCC..2711.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGATGTTG-GCCGGAGTGAATGCC..2511.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCCCATGCAAGCACCCAGT............................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCCAGTAGTGATGTTG-GCCG.............2311.001100000
droBip1
CTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATC-A--GCTGATAATAATTTTCCCAGT------TATAT-TAAA------TTTTATGCTTT----------------------------------------------------------------------------------------------TTTTTTCTC-----------------GTTTTCCAGAACACCCCATGCAAGCACCCAGTGGTGATGTTG-GCCGGCGTGAATGCCAASizeHit CountTotal NormTotal
No Reads
dp5
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATAGAACACACCATGCAAACACCCTGTGGTAATGCTG-GCCGGCGTCAATGCGAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACACCATGCAAACACCCTGTGGTAATGCTGGGCCGGCGTCAATGCGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAACAGAACACACCATGCAAACATCCTGTAGTCATGTTG-GCCGGCGTAAATGCTAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGTAGTCATGTTG-G................1812.00200020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGTCATGTTG-GCCGGC...........1911.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTG-GCCGGCGTAAATGCTA.2011.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGTAGTCATGTTG-GCCGGC...........2311.00100010
droVir3
ACAA-----ATGTAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAAT------ATATAAA---------------------------------------------------------------------------------------------TTG-----TTTGCATATTGTAGACAT-----TGCTGCAAGAACA-GTACGACAAGCATCCAATTTTCATACTC-AAGGATGTCAAGTACCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACA-GTACGACAAGC...................................1813.003001000000000000000000000000000000000200000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACA-GTACGACAAGCATC................................1913.003000000000000010000000100000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTC-AAGGATGTCAAGT....1912.002000100000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCATCCAATTTTCATACTC-.................2211.001000000000000000000000000000000000001000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTC-AAGGATGTCAAGTACC.2211.001000000000000000000000000000000000000000000001000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGAACA-GTACGACAAGC...................................2111.001000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGCATCCAATTTTCA.......................1911.001000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAT-----TGCTGCAAGAACA-GT............................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACA-GTACGACAAGCAT.................................1811.001000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAACA-GTACGACAAGCAT.................................2211.001000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCAATTTTCATACTC-AAGGAT...........2411.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAATTTTCATACTC-AAGGA............2211.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACA-GTACGACAAGC...................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGACAAGCATCCAATTTTCATACT...................2711.001000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-GTACGACAAGCATCCAAT............................1911.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAACA-GTACGACAAGCA..................................2111.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAACA-GTACGACAAGCATC................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATTTTCATACTC-AAGGATGT.........2311.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACA-GTACGACAAGCATCCAATTTTCA.......................2811.001000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACA-GTACGACAAGCATCCAATTTT.........................2611.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTC-AAGGATGTCAAG.....1811.001000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----TGCTGCAAGAACA-GTACG.........................................2011.001000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAATTTTCATACTC-AAGGAT...........2311.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
TGAA-----AATAAATAA------------TTGAA------------------------------T---------------------------------------------------ATATATAATATATTTATATATTTAATAAAGTATATATTATTA---------------------------------------------------ACTTAT----TTTAA----------TATTTA--------------------------AAATATT-----------------------------------------------------------------------------------------------------------------CATATAA-------------TAAA-----------------------TTTCAAATTTATTTATTGTGATTTAA------------------------TTTATTTATTT-----------TCATATATATATCATTATGAGTATTTTTTTCAAATATCAAAA---------------------------------------------A--------------------TGAGTATGATTTAAACA-----------------------------------------------------AAATTGATATCATTAATTTA-----C-TTT-TA---------------TCTTTATAGAACACGCCATGCAAGCATCCAGTGGTGATGTTG-GCTGGCGTCAACGCCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGTGGTGATGTTG-GCTG.............2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACACGCCATGCAAGC...................................1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCAGTGGTGATGTTG-GCT..............2211.001000010
droGri2
TATA-----TAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAT-ATTA------TTTAATGCATT----------------------------------------------------------------------------------------------CGGTTTGTTGCTTTTTTGCTTTATTAAATATACAGAACACGCCATGCAAACATCCAGTGGTGATGTTG-GCTGGCGTCAATGCCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:13 AM